>CG028_HUMAN (O95766) Protein C7orf28|
          Length = 482

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = +1

Query: 118 IFDLRRGQQEGQELDKILFFHPADCPILLQXSVIGLCEGIITFTRIFSPEDDCEVIESDK 297
           I++ R G +EGQE +KILF+HP +     +   +GLCE I+ FTR FSP    + + + K
Sbjct: 29  IYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQK 88

Query: 298 HSHVFYQAEPDIWMVLVV 351
           +   F + E + WMV+VV
Sbjct: 89  NRQFFNEPEENFWMVMVV 106

>CG028_MOUSE (Q8C1Y8) Protein C7orf28 homolog|
          Length = 480

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +1

Query: 118 IFDLRRGQQEGQELDKILFFHPADCPILLQXSVIGLCEGIITFTRIFSPEDDCEVIESDK 297
           I++ R G +EG+E +KILF+HP +     +   +GLCE I+ FTR FSP    + + + K
Sbjct: 27  IYNPRFGPREGEEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQK 86

Query: 298 HSHVFYQAEPDIWMVLVV 351
           +   F + E + WMV+VV
Sbjct: 87  NRQFFNEPEENFWMVMVV 104

>PILC_PSEPU (P36641) Type 4 fimbrial assembly protein pilC|
          Length = 401

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +1

Query: 40  STSSSHQVSVKMGLSSAADIDGAQL---CIFDLRRGQQEGQELDKILFFHPADCPILLQX 210
           +TS +  V +   L + A   G +L    I  LR+G   GQ L++ +   P   P+L+Q 
Sbjct: 276 ATSYAAGVPLLDALGTVAKASGGELHQQAIQRLRQGMANGQGLNQAMAAEPLFPPLLVQL 335

Query: 211 SVIGLCEGII 240
             IG   G +
Sbjct: 336 VAIGESSGTL 345

>Y413_METJA (Q57856) Putative ABC transporter permease protein MJ0413|
          Length = 267

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 296 LSDSITSQSSSGENILVKVMIPSQRPMTEXWSRMGQSAGW 177
           L ++  +  + G +IL+KV+IP+  P      R+G    W
Sbjct: 163 LIEAALTLGAKGRDILIKVVIPASSPSILTGLRVGAGIAW 202

>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein|
           complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3
           complex delta subunit) (Delta-adaptin) (mBLVR1)
          Length = 1199

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 253 IFSPEDDCEVIESDKHSHVFYQAE 324
           I SP+D+CEV++ ++  HV +  E
Sbjct: 891 ITSPKDECEVLKGEEEDHVDHDQE 914

>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -3

Query: 311 KTWECLSDSITSQSSSG--------ENILVKVMIPSQRPMTEXWSRMGQSAGWKKRIXXX 156
           K WEC++  +  +  SG        E+ L+++M+ + R   E    +G+  G  KR+   
Sbjct: 493 KDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTG--KRVLTA 550

Query: 155 XXXXXXXXLRSKI 117
                    R+KI
Sbjct: 551 KEKKTQLDDRTKI 563

>STAG1_XENLA (Q9DGN1) Cohesin subunit SA-1 (xSA-1) (Stromal antigen 1 homolog)|
           (SCC3 homolog 1)
          Length = 1265

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -3

Query: 311 KTWECLSDSITSQSSSGENI--------LVKVMIPSQRPMTEXWSRMGQSAGWKKRIXXX 156
           K WEC+++ +  +   GE +        LV++M+ + R   E    +G+  G  KR+   
Sbjct: 504 KDWECMTELLVEEPMQGEEVMSERQESALVELMVCTIRQAAEAHPPVGRGTG--KRVLTA 561

Query: 155 XXXXXXXXLRSKI 117
                    ++K+
Sbjct: 562 KERKTQLDDKTKL 574

>UBIB_NEIMB (Q9K0N0) Probable ubiquinone biosynthesis protein ubiB|
          Length = 503

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 266 SGENILVKVMIPSQRPMTE-XWSRMGQSAGWKKRI 165
           SGE + VKV+ P+  P+ E   S M   AGW +R+
Sbjct: 141 SGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVERL 175

>PRDX1_DROME (Q9V3P0) Peroxiredoxin 1 (EC 1.11.1.15) (Thioredoxin peroxidase)|
           (Cytosolic thioredoxin peroxidase) (DmTPx-1) (DPx-4783)
          Length = 194

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 124 DLRRGQQEGQELDKILFFHPADCPILLQXSVIGLCEGIITFTRIFSPEDDCEVI 285
           D++    +G+ L  +LFF+P D   +    +I   E    F +I     +CEVI
Sbjct: 23  DIKLSDYKGKYL--VLFFYPLDFTFVCPTEIIAFSESAAEFRKI-----NCEVI 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,535,618
Number of Sequences: 219361
Number of extensions: 927184
Number of successful extensions: 2976
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2970
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)