ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags35i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482488.1| Oryza sativa (japonica cultivar-group), mRNA 283 2e-73
2dbj|AK066491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 2e-73
3gb|AY105857.1| Zea mays PCO097564 mRNA sequence 222 6e-55
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
5dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
6dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
7gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete... 42 1.3
8gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's... 42 1.3
9gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complet... 42 1.3
10emb|BX119322.2| Human DNA sequence from clone RP4-656J1 on chrom... 42 1.3
11emb|AL390234.13| Human DNA sequence from clone RP5-1032G3 on chr... 42 1.3
12dbj|AK144048.1| Mus musculus adult male kidney cDNA, RIKEN full-... 42 1.3
13gb|AC139887.3| Homo sapiens BAC clone RP11-440L14 from 4, comple... 42 1.3
14gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 ... 42 1.3
15gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 ... 42 1.3
16emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on ch... 42 1.3
17gb|AC129296.2| Mus musculus BAC clone RP24-574O8 from chromosome... 40 5.0
18gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome... 40 5.0
19gb|AC126022.4| Mus musculus BAC clone RP24-405F4 from chromosome... 40 5.0
20gb|AC007243.4| Homo sapiens BAC clone RP11-195L14 from 7, comple... 40 5.0
21emb|AL357936.25| Human DNA sequence from clone RP11-524G24 on ch... 40 5.0
22emb|AL163541.13| Human DNA sequence from clone RP11-358F13 on ch... 40 5.0
23emb|CR376858.7| Zebrafish DNA sequence from clone CH211-87A2 in ... 40 5.0
24emb|BX511146.6| Zebrafish DNA sequence from clone DKEY-150K1 in ... 40 5.0
25gb|AF301509.1|AF301509 Pleuronectes americanus pleurocidin-like ... 40 5.0
26ref|NM_214150.1| Sus scrofa neuropeptide Y Y2 receptor (NPY2R), ... 40 5.0
27gb|AF005780.2|AF005780 Sus scrofa neuropeptide Y Y2 receptor mRN... 40 5.0
28gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosom... 40 5.0
29gb|AF106082.1|AF106082 Sus scrofa neuropeptide Y2 receptor (NPY2... 40 5.0
30gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, co... 40 5.0
31gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, co... 40 5.0
32gb|AC002416.1|AC002416 Human Chromosome X, complete sequence 40 5.0
33emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chr... 40 5.0 
>ref|XM_482488.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1999

 Score =  283 bits (143), Expect = 2e-73
 Identities = 231/261 (88%)
 Strand = Plus / Plus

                                                                       
Query: 107 cgcagctgtgtatcttcgacctgaggagagggcagcaggaggggcaggagctcgacaaga 166
           ||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 221 cgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaaga 280

                                                                       
Query: 167 tcctcttcttccacccggctgactgccccatcctgctccagntctccgtcattggcctct 226
           ||||||||||||||||  | |||||||||||||| |||||| |||||||||| |||||||
Sbjct: 281 tcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctct 340

                                                                       
Query: 227 gtgaaggaatcatcactttcacaagaatattttctccagaagatgactgtgaggtgatag 286
           | || || |||||||| ||| | |||||||||||||| || ||||| |||||||||||||
Sbjct: 341 gcgaggggatcatcaccttcgctagaatattttctcctgatgatgattgtgaggtgatag 400

                                                                       
Query: 287 aatctgacaaacactcccacgttttttaccaagctgagccagatatttggatggttctgg 346
           |||| || ||||||||||| |||||||||||||||||  ||||||| |||||||||||||
Sbjct: 401 aatcagagaaacactcccatgttttttaccaagctgaagcagatatatggatggttctgg 460

                                
Query: 347 tagtgcanaaaattaaggaca 367
           ||||| | ||||  |||||||
Sbjct: 461 tagtggagaaaaacaaggaca 481
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>dbj|AK066491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070L23, full
           insert sequence
          Length = 1999

 Score =  283 bits (143), Expect = 2e-73
 Identities = 231/261 (88%)
 Strand = Plus / Plus

                                                                       
Query: 107 cgcagctgtgtatcttcgacctgaggagagggcagcaggaggggcaggagctcgacaaga 166
           ||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 221 cgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaaga 280

                                                                       
Query: 167 tcctcttcttccacccggctgactgccccatcctgctccagntctccgtcattggcctct 226
           ||||||||||||||||  | |||||||||||||| |||||| |||||||||| |||||||
Sbjct: 281 tcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctct 340

                                                                       
Query: 227 gtgaaggaatcatcactttcacaagaatattttctccagaagatgactgtgaggtgatag 286
           | || || |||||||| ||| | |||||||||||||| || ||||| |||||||||||||
Sbjct: 341 gcgaggggatcatcaccttcgctagaatattttctcctgatgatgattgtgaggtgatag 400

                                                                       
Query: 287 aatctgacaaacactcccacgttttttaccaagctgagccagatatttggatggttctgg 346
           |||| || ||||||||||| |||||||||||||||||  ||||||| |||||||||||||
Sbjct: 401 aatcagagaaacactcccatgttttttaccaagctgaagcagatatatggatggttctgg 460

                                
Query: 347 tagtgcanaaaattaaggaca 367
           ||||| | ||||  |||||||
Sbjct: 461 tagtggagaaaaacaaggaca 481
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>gb|AY105857.1| Zea mays PCO097564 mRNA sequence
          Length = 987

 Score =  222 bits (112), Expect = 6e-55
 Identities = 206/238 (86%)
 Strand = Plus / Plus

                                                                       
Query: 136 gggcagcaggaggggcaggagctcgacaagatcctcttcttccacccggctgactgcccc 195
           ||||| |||||||| |||||||||||||||||||||| |||| |||| || |||||||||
Sbjct: 289 gggcaacaggagggccaggagctcgacaagatcctctacttctaccccgccgactgcccc 348

                                                                       
Query: 196 atcctgctccagntctccgtcattggcctctgtgaaggaatcatcactttcacaagaata 255
           |||||||||||| |||| ||||| |||||||| || || ||| |||||||||| ||||||
Sbjct: 349 atcctgctccagctctctgtcatcggcctctgcgaggggatcgtcactttcactagaata 408

                                                                       
Query: 256 ttttctccagaagatgactgtgaggtgatagaatctgacaaacactcccacgttttttac 315
           ||||| |||||||| || || ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 409 ttttccccagaagaggattgcgaggttatagaatcagagaaacactcccatgttttttac 468

                                                                     
Query: 316 caagctgagccagatatttggatggttctggtagtgcanaaaattaaggacaatgaat 373
           ||||| ||  | |||||||||||||||||||| ||| | ||||  ||||| |||||||
Sbjct: 469 caagccgaaacggatatttggatggttctggttgtggaaaaaaacaaggaaaatgaat 526
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  161 bits (81), Expect = 2e-36
 Identities = 122/136 (89%)
 Strand = Plus / Plus

                                                                            
Query: 107      cgcagctgtgtatcttcgacctgaggagagggcagcaggaggggcaggagctcgacaaga 166
                ||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 20546106 cgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaaga 20546165

                                                                            
Query: 167      tcctcttcttccacccggctgactgccccatcctgctccagntctccgtcattggcctct 226
                ||||||||||||||||  | |||||||||||||| |||||| |||||||||| |||||||
Sbjct: 20546166 tcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctct 20546225

                                
Query: 227      gtgaaggaatcatcac 242
                | || || ||||||||
Sbjct: 20546226 gcgaggggatcatcac 20546241



 Score =  125 bits (63), Expect = 1e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                            
Query: 250      agaatattttctccagaagatgactgtgaggtgatagaatctgacaaacactcccacgtt 309
                |||||||||||||| || ||||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 20546922 agaatattttctcctgatgatgattgtgaggtgatagaatcagagaaacactcccatgtt 20546981

                                                       
Query: 310      ttttaccaagctgagccagatatttggatggttctggta 348
                ||||||||||||||  ||||||| |||||||||||||||
Sbjct: 20546982 ttttaccaagctgaagcagatatatggatggttctggta 20547020
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>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0032E15
          Length = 120419

 Score =  161 bits (81), Expect = 2e-36
 Identities = 122/136 (89%)
 Strand = Plus / Plus

                                                                         
Query: 107   cgcagctgtgtatcttcgacctgaggagagggcagcaggaggggcaggagctcgacaaga 166
             ||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 50067 cgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaaga 50126

                                                                         
Query: 167   tcctcttcttccacccggctgactgccccatcctgctccagntctccgtcattggcctct 226
             ||||||||||||||||  | |||||||||||||| |||||| |||||||||| |||||||
Sbjct: 50127 tcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctct 50186

                             
Query: 227   gtgaaggaatcatcac 242
             | || || ||||||||
Sbjct: 50187 gcgaggggatcatcac 50202



 Score =  125 bits (63), Expect = 1e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 250   agaatattttctccagaagatgactgtgaggtgatagaatctgacaaacactcccacgtt 309
             |||||||||||||| || ||||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 50883 agaatattttctcctgatgatgattgtgaggtgatagaatcagagaaacactcccatgtt 50942

                                                    
Query: 310   ttttaccaagctgagccagatatttggatggttctggta 348
             ||||||||||||||  ||||||| |||||||||||||||
Sbjct: 50943 ttttaccaagctgaagcagatatatggatggttctggta 50981
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>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1663_D06
          Length = 139103

 Score =  161 bits (81), Expect = 2e-36
 Identities = 122/136 (89%)
 Strand = Plus / Plus

                                                                         
Query: 107   cgcagctgtgtatcttcgacctgaggagagggcagcaggaggggcaggagctcgacaaga 166
             ||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 20478 cgcagctgtgcgtgttcgacctgaggcgggggcagcaggaggggcaggagctcgacaaga 20537

                                                                         
Query: 167   tcctcttcttccacccggctgactgccccatcctgctccagntctccgtcattggcctct 226
             ||||||||||||||||  | |||||||||||||| |||||| |||||||||| |||||||
Sbjct: 20538 tcctcttcttccaccccaccgactgccccatcctcctccagctctccgtcatcggcctct 20597

                             
Query: 227   gtgaaggaatcatcac 242
             | || || ||||||||
Sbjct: 20598 gcgaggggatcatcac 20613



 Score =  125 bits (63), Expect = 1e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 250   agaatattttctccagaagatgactgtgaggtgatagaatctgacaaacactcccacgtt 309
             |||||||||||||| || ||||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 21294 agaatattttctcctgatgatgattgtgaggtgatagaatcagagaaacactcccatgtt 21353

                                                    
Query: 310   ttttaccaagctgagccagatatttggatggttctggta 348
             ||||||||||||||  ||||||| |||||||||||||||
Sbjct: 21354 ttttaccaagctgaagcagatatatggatggttctggta 21392
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>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence
          Length = 171000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 138    gcagcaggaggggcaggagctcgac 162
              |||||||||| ||||||||||||||
Sbjct: 136168 gcagcaggagcggcaggagctcgac 136192
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>gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 138366

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   gggcagcaggaggggcaggag 156
             |||||||||||||||||||||
Sbjct: 16127 gggcagcaggaggggcaggag 16107



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   gggcagcaggaggggcaggag 156
             |||||||||||||||||||||
Sbjct: 14907 gggcagcaggaggggcaggag 14887



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   ggcagcaggaggggcaggag 156
             ||||||||||||||||||||
Sbjct: 16450 ggcagcaggaggggcaggag 16431
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>gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complete sequence
          Length = 225065

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    gcagcagccaccaagtttctg 67
             |||||||||||||||||||||
Sbjct: 90048 gcagcagccaccaagtttctg 90028
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>emb|BX119322.2| Human DNA sequence from clone RP4-656J1 on chromosome 1 Contains part
             of a novel gene (FLJ10986), complete sequence
          Length = 43248

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 2     catccatccagtactgcatccagccaacc 30
             ||||||||||||  |||||||||||||||
Sbjct: 41690 catccatccagtcatgcatccagccaacc 41718
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>emb|AL390234.13| Human DNA sequence from clone RP5-1032G3 on chromosome 1p31.3-32.3
              Contains part of a novel gene (FLJ10986), complete sequence
          Length = 126470

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 2      catccatccagtactgcatccagccaacc 30
              ||||||||||||  |||||||||||||||
Sbjct: 126029 catccatccagtcatgcatccagccaacc 126001
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>dbj|AK144048.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:F530206N16 product:inhibitor of kappaB
            kinase beta, full insert sequence
          Length = 2424

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 47   gcagcagccaccaagtttctg 67
            |||||||||||||||||||||
Sbjct: 1446 gcagcagccaccaagtttctg 1426
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>gb|AC139887.3| Homo sapiens BAC clone RP11-440L14 from 4, complete sequence
          Length = 186774

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    gagagggcagcaggaggggca 152
              |||||||||||||||||||||
Sbjct: 172314 gagagggcagcaggaggggca 172294
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>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete
              sequence
          Length = 346734

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 138    gcagcaggaggggcaggagctcgac 162
              |||||||||| ||||||||||||||
Sbjct: 180852 gcagcaggagcggcaggagctcgac 180876
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>gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 DS00164 (D269)), complete
             sequence
          Length = 86391

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 138   gcagcaggaggggcaggagctcgac 162
             |||||||||| ||||||||||||||
Sbjct: 36984 gcagcaggagcggcaggagctcgac 37008
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>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete
             sequence
          Length = 165908

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    ccatctacaagcagcagccac 57
             |||||||||||||||||||||
Sbjct: 82737 ccatctacaagcagcagccac 82717
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>gb|AC129296.2| Mus musculus BAC clone RP24-574O8 from chromosome 3, complete sequence
          Length = 149793

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    ggagagggcagcaggaggggcagg 154
              |||||||| |||||||||||||||
Sbjct: 107046 ggagaggggagcaggaggggcagg 107023
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>gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome 8, complete
            sequence
          Length = 176667

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 270  tgactgtgaggtgatagaatctga 293
            ||||||||| ||||||||||||||
Sbjct: 8590 tgactgtgatgtgatagaatctga 8613
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>gb|AC126022.4| Mus musculus BAC clone RP24-405F4 from chromosome 16, complete sequence
          Length = 173331

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   cagcaggaggggcaggagct 158
             ||||||||||||||||||||
Sbjct: 46677 cagcaggaggggcaggagct 46658
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>gb|AC007243.4| Homo sapiens BAC clone RP11-195L14 from 7, complete sequence
          Length = 126391

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 ctttcacaagaatattttct 261
           ||||||||||||||||||||
Sbjct: 803 ctttcacaagaatattttct 822
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>emb|AL357936.25| Human DNA sequence from clone RP11-524G24 on chromosome 9 Contains the
             5' end of two variants of the DAB2IP gene for DAB2
             interacting protein (AF9Q34, DIP1/2, KIAA1743), a novel
             gene and two CpG islands, complete sequence
          Length = 107529

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   gagagggcagcaggaggggcagga 155
             ||||||||||| ||||||||||||
Sbjct: 98333 gagagggcagctggaggggcagga 98310
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>emb|AL163541.13| Human DNA sequence from clone RP11-358F13 on chromosome 13, complete
             sequence
          Length = 192305

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   cctgaggagagggcagcagg 145
             ||||||||||||||||||||
Sbjct: 97770 cctgaggagagggcagcagg 97751
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>emb|CR376858.7| Zebrafish DNA sequence from clone CH211-87A2 in linkage group 8,
             complete sequence
          Length = 165716

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgccatctacaagcagcagc 54
             ||||||||||||||||||||
Sbjct: 88407 tgccatctacaagcagcagc 88388
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>emb|BX511146.6| Zebrafish DNA sequence from clone DKEY-150K1 in linkage group 8,
             complete sequence
          Length = 182736

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgccatctacaagcagcagc 54
             ||||||||||||||||||||
Sbjct: 82659 tgccatctacaagcagcagc 82678
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>gb|AF301509.1|AF301509 Pleuronectes americanus pleurocidin-like prepropolypeptide (ple1a)
           mRNA, partial cds
          Length = 217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 caggaggggcaggagctcgacaag 165
           |||||||||||||||||| |||||
Sbjct: 178 caggaggggcaggagctcaacaag 201
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>ref|NM_214150.1| Sus scrofa neuropeptide Y Y2 receptor (NPY2R), mRNA
          Length = 1149

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  gcctctgtgaaggaatcatc 240
            ||||||||||||||||||||
Sbjct: 1136 gcctctgtgaaggaatcatc 1117
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>gb|AF005780.2|AF005780 Sus scrofa neuropeptide Y Y2 receptor mRNA, complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  gcctctgtgaaggaatcatc 240
            ||||||||||||||||||||
Sbjct: 1136 gcctctgtgaaggaatcatc 1117
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>gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosome 8, complete sequence
          Length = 158424

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   tgactgtgaggtgatagaatctga 293
             ||||||||| ||||||||||||||
Sbjct: 34118 tgactgtgatgtgatagaatctga 34095
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>gb|AF106082.1|AF106082 Sus scrofa neuropeptide Y2 receptor (NPY2R) gene, complete cds
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  gcctctgtgaaggaatcatc 240
            ||||||||||||||||||||
Sbjct: 1162 gcctctgtgaaggaatcatc 1143
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>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence
          Length = 160247

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   ggagagggcagcaggagggg 150
             ||||||||||||||||||||
Sbjct: 67392 ggagagggcagcaggagggg 67373
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>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence
          Length = 185278

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   gaggagagggcagcaggagg 148
             ||||||||||||||||||||
Sbjct: 42120 gaggagagggcagcaggagg 42139
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>gb|AC002416.1|AC002416 Human Chromosome X, complete sequence
          Length = 128915

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   caagaatattttctccagaa 267
             ||||||||||||||||||||
Sbjct: 71670 caagaatattttctccagaa 71689
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>emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chromosome 1, complete
              sequence
          Length = 224628

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gaggagagggcagcaggagg 148
              ||||||||||||||||||||
Sbjct: 188400 gaggagagggcagcaggagg 188419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,696,368
Number of Sequences: 3902068
Number of extensions: 3696368
Number of successful extensions: 77838
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77733
Number of HSP's gapped (non-prelim): 105
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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