>YE99_SCHPO (O13771) Hypothetical protein C17A5.09c in chromosome I|
          Length = 310

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 306 NLRKTADINGSLADELGDQAGEIPQVGGAKVSKKRNYSFSYDPSEVFVE 452
           NL +T   +   A  LGD  G +P    +K SK  N SFS D  + +V+
Sbjct: 99  NLDETDSKDDFTAGTLGDTLGTLPSTRVSKDSKDDNVSFSSDKKQFYVK 147

>Y1816_SHEON (Q8EFZ8) UPF0319 protein SO1816 precursor|
          Length = 226

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 18  VLKEPKVDSQNKQLSLIESEKSKMNYTV 101
           V+K+PKV +QN Q+ L  ++K ++NY V
Sbjct: 105 VVKKPKVFAQNPQVVLTRADKGQVNYQV 132

>SA155_YEAST (P43612) SIT4-associating protein SAP155|
          Length = 1002

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 160 FLKGN*KCHLQSQHQYLGFENALR*YSNALLRRVLVMIMVDFF 288
           FLK N    L  Q QYL F    R + + +L+ V + +++DFF
Sbjct: 330 FLKINQNLLLTRQDQYLNFIRTERSFVDDMLKHVDISLLMDFF 372

>NDC1_XENLA (Q6AX31) Nucleoporin NDC1 (xNDC1) (Transmembrane protein 48)|
          Length = 660

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +3

Query: 270 DNGRLLQNCVPKNLRKTADING-SLADELGDQA---GEIPQVGGAKVSKKRNYSFSYDPS 437
           +NGR+     PK +RK++  +G SL ++  +Q      IP++G   + K  +   S D  
Sbjct: 377 NNGRMRVPSSPKQIRKSSSSSGTSLIEDSAEQTQNLSTIPRIGIPSLLKTASLKSSLDIG 436

Query: 438 EVFVEPRRKYQRSTI 482
             F  P  K    ++
Sbjct: 437 SPFATPGVKQMSESL 451

>SPD1A_XENLA (Q9PU13) Speedy protein 1-A (Spy1-A) (XSpy1-A) (Rapid inducer of|
           G2/M progression in oocytes A) (RINGO-A) (p33 ringo-A)
           (xRINGO-A) (Protein Ls26)
          Length = 299

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = -2

Query: 288 EEVYHYHDQNSSQESV*ISPERIFEPK 208
           +E++HY ++  SQE + +SPE + +P+
Sbjct: 246 QEIFHYTNREWSQELLMLSPELLLDPE 272

>ZIC3_XENLA (O57311) Zinc finger protein ZIC 3 (Zinc finger protein of the|
           cerebellum 3) (ZIC3 protein)
          Length = 441

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 342 ADELGDQAGEIPQVGGAKVSKKRNYSF 422
           A+ LG  AG++P  GGA  +  R++ F
Sbjct: 73  ANSLGHHAGQVPSYGGAAFNSTRDFLF 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,118,054
Number of Sequences: 219361
Number of extensions: 1109451
Number of successful extensions: 2787
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2787
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)