ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags35g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 396 e-107
2dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic D... 396 e-107
3dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic D... 396 e-107
4dbj|AK101896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
5gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, co... 44 0.51
6gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's H... 42 2.0
7gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
8emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
11emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 2.0
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
13gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome... 40 8.0
14gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987... 40 8.0
15gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence 40 8.0
16gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosom... 40 8.0
17emb|CR859426.1| Pongo pygmaeus mRNA; cDNA DKFZp469M026 (from clo... 40 8.0
18gb|AC084091.5| Homo sapiens chromosome 8, clone CTD-2532E22, com... 40 8.0
19gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromo... 40 8.0
20gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromoso... 40 8.0
21gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, comple... 40 8.0
22gb|AC153461.2| Homo sapiens chromosome 7 clone WI2-948H7, comple... 40 8.0
23gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3... 40 8.0
24gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complet... 40 8.0
25gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complet... 40 8.0
26gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.0
27gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromo... 40 8.0
28emb|AL611924.14| Mouse DNA sequence from clone RP23-106K5 on chr... 40 8.0 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  396 bits (200), Expect = e-107
 Identities = 440/520 (84%)
 Strand = Plus / Plus

                                                                            
Query: 66       tgtttgaggacatgaagctcgcaggggtgaaaccaaatgatgtgactttcttggggcttt 125
                ||||| ||||||||||||| || || || | ||||||||| ||||| ||| | || ||| 
Sbjct: 18156461 tgtttcaggacatgaagcttgctggagtaagaccaaatgacgtgacattccttggacttc 18156520

                                                                            
Query: 126      tgtcagcatgcaaccatgcgggtgctgtggagaaagggtggttctactttcattccatga 185
                | ||||||||||||||||| |||||||| |||||||| |||  ||||||||| || ||||
Sbjct: 18156521 tatcagcatgcaaccatgcaggtgctgttgagaaaggatggagctactttcactctatga 18156580

                                                                            
Query: 186      aacccgaccacaagatcgagcctcgacaccagcactatgcttgtgtggtcgacctgcttg 245
                |||| ||| |    || ||||| |  ||||||||||||||||| ||||| ||||||||| 
Sbjct: 18156581 aacctgactatggaattgagccccagcaccagcactatgcttgcgtggtagacctgcttt 18156640

                                                                            
Query: 246      ctcgtgctggtcagcttgacagagcttatcgatttatacttgacatgcccatcaagccag 305
                |||||||||| |||||||| ||||| || | |||||||||  | ||||||||||| ||||
Sbjct: 18156641 ctcgtgctggacagcttgatagagcctaccaatttatactgaatatgcccatcaaaccag 18156700

                                                                            
Query: 306      agatgagtgtgtggggtgccttacttcacggttgcaagatgcacgagcactcgaacatgg 365
                |||||| ||| ||||| || ||||| || |||||||||||||||| |||||| |||||||
Sbjct: 18156701 agatgactgtctggggcgctttactccatggttgcaagatgcacgggcactcaaacatgg 18156760

                                                                            
Query: 366      ccatggctgagagggcagcacagcacatctttgagttggagcaatccaacgcggggcatt 425
                ||||||||||  | |||||||||||||| |||||||||||||| ||||| || ||||| |
Sbjct: 18156761 ccatggctgaatgcgcagcacagcacatttttgagttggagcagtccaatgcagggcact 18156820

                                                                            
Query: 426      atgtgcagctggcaaacatgtatgcgtctgcagggatgtggagccatgttgctggtgtac 485
                |||| ||||| |||||||||||||| |||||||||||||||||||| || |||||  | |
Sbjct: 18156821 atgttcagcttgcaaacatgtatgcatctgcagggatgtggagccaagtcgctggcatgc 18156880

                                                                            
Query: 486      gggccaccatgagagagaggggtgtcaccaaagcaaccggatgcagctccattgaggttg 545
                | | ||||||||||||||||||||||||||| ||||| || |  |||| ||| |||||||
Sbjct: 18156881 gagtcaccatgagagagaggggtgtcaccaaggcaacggggtttagcttcatcgaggttg 18156940

                                                        
Query: 546      atggagagacgcacaacttccatgcctgggatcactcgca 585
                ||||||||| ||||   |||||||| ||||||||||||||
Sbjct: 18156941 atggagagatgcactcattccatgcttgggatcactcgca 18156980
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>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0026C08
          Length = 155316

 Score =  396 bits (200), Expect = e-107
 Identities = 440/520 (84%)
 Strand = Plus / Plus

                                                                          
Query: 66     tgtttgaggacatgaagctcgcaggggtgaaaccaaatgatgtgactttcttggggcttt 125
              ||||| ||||||||||||| || || || | ||||||||| ||||| ||| | || ||| 
Sbjct: 149583 tgtttcaggacatgaagcttgctggagtaagaccaaatgacgtgacattccttggacttc 149642

                                                                          
Query: 126    tgtcagcatgcaaccatgcgggtgctgtggagaaagggtggttctactttcattccatga 185
              | ||||||||||||||||| |||||||| |||||||| |||  ||||||||| || ||||
Sbjct: 149643 tatcagcatgcaaccatgcaggtgctgttgagaaaggatggagctactttcactctatga 149702

                                                                          
Query: 186    aacccgaccacaagatcgagcctcgacaccagcactatgcttgtgtggtcgacctgcttg 245
              |||| ||| |    || ||||| |  ||||||||||||||||| ||||| ||||||||| 
Sbjct: 149703 aacctgactatggaattgagccccagcaccagcactatgcttgcgtggtagacctgcttt 149762

                                                                          
Query: 246    ctcgtgctggtcagcttgacagagcttatcgatttatacttgacatgcccatcaagccag 305
              |||||||||| |||||||| ||||| || | |||||||||  | ||||||||||| ||||
Sbjct: 149763 ctcgtgctggacagcttgatagagcctaccaatttatactgaatatgcccatcaaaccag 149822

                                                                          
Query: 306    agatgagtgtgtggggtgccttacttcacggttgcaagatgcacgagcactcgaacatgg 365
              |||||| ||| ||||| || ||||| || |||||||||||||||| |||||| |||||||
Sbjct: 149823 agatgactgtctggggcgctttactccatggttgcaagatgcacgggcactcaaacatgg 149882

                                                                          
Query: 366    ccatggctgagagggcagcacagcacatctttgagttggagcaatccaacgcggggcatt 425
              ||||||||||  | |||||||||||||| |||||||||||||| ||||| || ||||| |
Sbjct: 149883 ccatggctgaatgcgcagcacagcacatttttgagttggagcagtccaatgcagggcact 149942

                                                                          
Query: 426    atgtgcagctggcaaacatgtatgcgtctgcagggatgtggagccatgttgctggtgtac 485
              |||| ||||| |||||||||||||| |||||||||||||||||||| || |||||  | |
Sbjct: 149943 atgttcagcttgcaaacatgtatgcatctgcagggatgtggagccaagtcgctggcatgc 150002

                                                                          
Query: 486    gggccaccatgagagagaggggtgtcaccaaagcaaccggatgcagctccattgaggttg 545
              | | ||||||||||||||||||||||||||| ||||| || |  |||| ||| |||||||
Sbjct: 150003 gagtcaccatgagagagaggggtgtcaccaaggcaacggggtttagcttcatcgaggttg 150062

                                                      
Query: 546    atggagagacgcacaacttccatgcctgggatcactcgca 585
              ||||||||| ||||   |||||||| ||||||||||||||
Sbjct: 150063 atggagagatgcactcattccatgcttgggatcactcgca 150102
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>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0556A05
          Length = 158189

 Score =  396 bits (200), Expect = e-107
 Identities = 440/520 (84%)
 Strand = Plus / Plus

                                                                        
Query: 66   tgtttgaggacatgaagctcgcaggggtgaaaccaaatgatgtgactttcttggggcttt 125
            ||||| ||||||||||||| || || || | ||||||||| ||||| ||| | || ||| 
Sbjct: 5185 tgtttcaggacatgaagcttgctggagtaagaccaaatgacgtgacattccttggacttc 5244

                                                                        
Query: 126  tgtcagcatgcaaccatgcgggtgctgtggagaaagggtggttctactttcattccatga 185
            | ||||||||||||||||| |||||||| |||||||| |||  ||||||||| || ||||
Sbjct: 5245 tatcagcatgcaaccatgcaggtgctgttgagaaaggatggagctactttcactctatga 5304

                                                                        
Query: 186  aacccgaccacaagatcgagcctcgacaccagcactatgcttgtgtggtcgacctgcttg 245
            |||| ||| |    || ||||| |  ||||||||||||||||| ||||| ||||||||| 
Sbjct: 5305 aacctgactatggaattgagccccagcaccagcactatgcttgcgtggtagacctgcttt 5364

                                                                        
Query: 246  ctcgtgctggtcagcttgacagagcttatcgatttatacttgacatgcccatcaagccag 305
            |||||||||| |||||||| ||||| || | |||||||||  | ||||||||||| ||||
Sbjct: 5365 ctcgtgctggacagcttgatagagcctaccaatttatactgaatatgcccatcaaaccag 5424

                                                                        
Query: 306  agatgagtgtgtggggtgccttacttcacggttgcaagatgcacgagcactcgaacatgg 365
            |||||| ||| ||||| || ||||| || |||||||||||||||| |||||| |||||||
Sbjct: 5425 agatgactgtctggggcgctttactccatggttgcaagatgcacgggcactcaaacatgg 5484

                                                                        
Query: 366  ccatggctgagagggcagcacagcacatctttgagttggagcaatccaacgcggggcatt 425
            ||||||||||  | |||||||||||||| |||||||||||||| ||||| || ||||| |
Sbjct: 5485 ccatggctgaatgcgcagcacagcacatttttgagttggagcagtccaatgcagggcact 5544

                                                                        
Query: 426  atgtgcagctggcaaacatgtatgcgtctgcagggatgtggagccatgttgctggtgtac 485
            |||| ||||| |||||||||||||| |||||||||||||||||||| || |||||  | |
Sbjct: 5545 atgttcagcttgcaaacatgtatgcatctgcagggatgtggagccaagtcgctggcatgc 5604

                                                                        
Query: 486  gggccaccatgagagagaggggtgtcaccaaagcaaccggatgcagctccattgaggttg 545
            | | ||||||||||||||||||||||||||| ||||| || |  |||| ||| |||||||
Sbjct: 5605 gagtcaccatgagagagaggggtgtcaccaaggcaacggggtttagcttcatcgaggttg 5664

                                                    
Query: 546  atggagagacgcacaacttccatgcctgggatcactcgca 585
            ||||||||| ||||   |||||||| ||||||||||||||
Sbjct: 5665 atggagagatgcactcattccatgcttgggatcactcgca 5704
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>dbj|AK101896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070P13, full
            insert sequence
          Length = 3359

 Score =  396 bits (200), Expect = e-107
 Identities = 440/520 (84%)
 Strand = Plus / Plus

                                                                        
Query: 66   tgtttgaggacatgaagctcgcaggggtgaaaccaaatgatgtgactttcttggggcttt 125
            ||||| ||||||||||||| || || || | ||||||||| ||||| ||| | || ||| 
Sbjct: 1477 tgtttcaggacatgaagcttgctggagtaagaccaaatgacgtgacattccttggacttc 1536

                                                                        
Query: 126  tgtcagcatgcaaccatgcgggtgctgtggagaaagggtggttctactttcattccatga 185
            | ||||||||||||||||| |||||||| |||||||| |||  ||||||||| || ||||
Sbjct: 1537 tatcagcatgcaaccatgcaggtgctgttgagaaaggatggagctactttcactctatga 1596

                                                                        
Query: 186  aacccgaccacaagatcgagcctcgacaccagcactatgcttgtgtggtcgacctgcttg 245
            |||| ||| |    || ||||| |  ||||||||||||||||| ||||| ||||||||| 
Sbjct: 1597 aacctgactatggaattgagccccagcaccagcactatgcttgcgtggtagacctgcttt 1656

                                                                        
Query: 246  ctcgtgctggtcagcttgacagagcttatcgatttatacttgacatgcccatcaagccag 305
            |||||||||| |||||||| ||||| || | |||||||||  | ||||||||||| ||||
Sbjct: 1657 ctcgtgctggacagcttgatagagcctaccaatttatactgaatatgcccatcaaaccag 1716

                                                                        
Query: 306  agatgagtgtgtggggtgccttacttcacggttgcaagatgcacgagcactcgaacatgg 365
            |||||| ||| ||||| || ||||| || |||||||||||||||| |||||| |||||||
Sbjct: 1717 agatgactgtctggggcgctttactccatggttgcaagatgcacgggcactcaaacatgg 1776

                                                                        
Query: 366  ccatggctgagagggcagcacagcacatctttgagttggagcaatccaacgcggggcatt 425
            ||||||||||  | |||||||||||||| |||||||||||||| ||||| || ||||| |
Sbjct: 1777 ccatggctgaatgcgcagcacagcacatttttgagttggagcagtccaatgcagggcact 1836

                                                                        
Query: 426  atgtgcagctggcaaacatgtatgcgtctgcagggatgtggagccatgttgctggtgtac 485
            |||| ||||| |||||||||||||| |||||||||||||||||||| || |||||  | |
Sbjct: 1837 atgttcagcttgcaaacatgtatgcatctgcagggatgtggagccaagtcgctggcatgc 1896

                                                                        
Query: 486  gggccaccatgagagagaggggtgtcaccaaagcaaccggatgcagctccattgaggttg 545
            | | ||||||||||||||||||||||||||| ||||| || |  |||| ||| |||||||
Sbjct: 1897 gagtcaccatgagagagaggggtgtcaccaaggcaacggggtttagcttcatcgaggttg 1956

                                                    
Query: 546  atggagagacgcacaacttccatgcctgggatcactcgca 585
            ||||||||| ||||   |||||||| ||||||||||||||
Sbjct: 1957 atggagagatgcactcattccatgcttgggatcactcgca 1996
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>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence
          Length = 160429

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 99     caaatgatgtgactttcttggggctt 124
              |||||||||||||| |||||||||||
Sbjct: 124818 caaatgatgtgactgtcttggggctt 124843
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>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 231716

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 305    gagatgagtgtgtggggtgcc 325
              |||||||||||||||||||||
Sbjct: 127039 gagatgagtgtgtggggtgcc 127019
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>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0060K21, complete sequence
          Length = 153973

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 216   agcactatgcttgtgtggtcgacctgcttgctcgtgc 252
             |||| |||||||||||||| ||| |||||| ||||||
Sbjct: 69905 agcattatgcttgtgtggttgacttgcttggtcgtgc 69941
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>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02,
             complete sequence
          Length = 175163

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 382   agcacagcacatctttgagtt 402
             |||||||||||||||||||||
Sbjct: 40689 agcacagcacatctttgagtt 40669
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 382      agcacagcacatctttgagtt 402
                |||||||||||||||||||||
Sbjct: 28392014 agcacagcacatctttgagtt 28391994
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 216      agcactatgcttgtgtggtcgacctgcttgctcgtgc 252
                |||| |||||||||||||| ||| |||||| ||||||
Sbjct: 21187746 agcattatgcttgtgtggttgacttgcttggtcgtgc 21187782
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    ccgaccacaagatcgagcctc 209
              |||||||||||||||||||||
Sbjct: 737759 ccgaccacaagatcgagcctc 737779
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 216      agcactatgcttgtgtggtcgacctgcttgctcgtgc 252
                |||| |||||||||||||| ||| |||||| ||||||
Sbjct: 21497987 agcattatgcttgtgtggttgacttgcttggtcgtgc 21498023
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>gb|AC164105.4| Mus musculus BAC clone RP23-433B2 from chromosome 9, complete sequence
          Length = 215089

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gagatgagtgtgtggggtgc 324
             ||||||||||||||||||||
Sbjct: 92937 gagatgagtgtgtggggtgc 92918
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>gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-100B4  ~complete
             genomic sequence, complete sequence
          Length = 174826

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   gtgtcaccaaagcaaccgga 526
             ||||||||||||||||||||
Sbjct: 26490 gtgtcaccaaagcaaccgga 26471
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>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence
          Length = 208667

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gactttcttggggcttttgt 128
             ||||||||||||||||||||
Sbjct: 93743 gactttcttggggcttttgt 93762
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>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete
             sequence
          Length = 220771

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   tggctgagagggcagcacag 388
             ||||||||||||||||||||
Sbjct: 81873 tggctgagagggcagcacag 81892
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>emb|CR859426.1| Pongo pygmaeus mRNA; cDNA DKFZp469M026 (from clone DKFZp469M026)
          Length = 6333

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  agagatgagtgtgtggggtg 323
            ||||||||||||||||||||
Sbjct: 4955 agagatgagtgtgtggggtg 4936
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>gb|AC084091.5| Homo sapiens chromosome 8, clone CTD-2532E22, complete sequence
          Length = 183486

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ttggggcttttgtcagcatg 135
              ||||||||||||||||||||
Sbjct: 121624 ttggggcttttgtcagcatg 121605
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>gb|AC149092.6| Pan troglodytes BAC clone CH251-553I6 from chromosome 7, complete
              sequence
          Length = 194702

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gcacatctttgagttggagc 407
              ||||||||||||||||||||
Sbjct: 121346 gcacatctttgagttggagc 121365
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>gb|AC161019.3| Pan troglodytes BAC clone CH251-7O2 from chromosome 7, complete
             sequence
          Length = 165769

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gcacatctttgagttggagc 407
             ||||||||||||||||||||
Sbjct: 13783 gcacatctttgagttggagc 13764
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>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence
          Length = 178105

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gcacatctttgagttggagc 407
              ||||||||||||||||||||
Sbjct: 123980 gcacatctttgagttggagc 123961
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>gb|AC153461.2| Homo sapiens chromosome 7 clone WI2-948H7, complete sequence
          Length = 38508

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gcacatctttgagttggagc 407
             ||||||||||||||||||||
Sbjct: 30218 gcacatctttgagttggagc 30237
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>gb|AC010139.4|AC010139 Homo sapiens BAC clone RP11-194G10 from 3, complete sequence
          Length = 161407

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   gagcctcgacaccagcacta 222
             ||||||||||||||||||||
Sbjct: 92544 gagcctcgacaccagcacta 92525
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>gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complete sequence
          Length = 186187

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    gtgtcaccaaagcaaccgga 526
              ||||||||||||||||||||
Sbjct: 151561 gtgtcaccaaagcaaccgga 151542
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>gb|AC017079.5| Homo sapiens BAC clone RP11-462M9 from 2, complete sequence
          Length = 176075

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gactttcttggggcttttgt 128
              ||||||||||||||||||||
Sbjct: 101008 gactttcttggggcttttgt 100989
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 442     catgtatgcgtctgcagggatgtggagc 469
               |||| |||||| ||||||||||||||||
Sbjct: 3112765 catgaatgcgtgtgcagggatgtggagc 3112792
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>gb|AC148935.6| Pan troglodytes BAC clone CH251-485J2 from chromosome 7, complete
              sequence
          Length = 215177

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gcacatctttgagttggagc 407
              ||||||||||||||||||||
Sbjct: 133003 gcacatctttgagttggagc 133022
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>emb|AL611924.14| Mouse DNA sequence from clone RP23-106K5 on chromosome 4, complete
              sequence
          Length = 164958

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    atgagtgtgtggggtgcctt 327
              ||||||||||||||||||||
Sbjct: 161060 atgagtgtgtggggtgcctt 161079


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,614,568
Number of Sequences: 3902068
Number of extensions: 4614568
Number of successful extensions: 77555
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77386
Number of HSP's gapped (non-prelim): 169
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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