Clone Information

BLAST Search Result

Clone Name	bags35f18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TIM22_ASPOR (Q2UAP8) Mitochondrial import inner membrane translo...	62	2e-09
2	TIM22_YARLI (Q6BZY4) Mitochondrial import inner membrane translo...	60	4e-09
3	TIM22_KLULA (Q6CRJ6) Mitochondrial import inner membrane translo...	60	4e-09
4	TIM22_CANGA (Q6FT37) Mitochondrial import inner membrane translo...	59	9e-09
5	TIM22_NEUCR (Q9C1E8) Mitochondrial import inner membrane translo...	58	2e-08
6	TIM22_DEBHA (Q6BT35) Mitochondrial import inner membrane translo...	58	3e-08
7	TIM22_ASHGO (Q75E80) Mitochondrial import inner membrane translo...	57	4e-08
8	TIM22_XENTR (Q5M7K0) Mitochondrial import inner membrane translo...	56	8e-08
9	TIM22_XENLA (Q5U4U5) Mitochondrial import inner membrane translo...	56	1e-07
10	TIM22_BOVIN (Q5BIN4) Mitochondrial import inner membrane translo...	55	2e-07
11	TIM22_MOUSE (Q9CQ85) Mitochondrial import inner membrane translo...	55	2e-07
12	TIM22_RAT (Q9JKW1) Mitochondrial import inner membrane transloca...	55	2e-07
13	TIM22_YEAST (Q12328) Mitochondrial import inner membrane translo...	53	9e-07
14	TIM22_HUMAN (Q9Y584) Mitochondrial import inner membrane translo...	52	1e-06
15	TIM22_CRYNE (Q5KKL8) Mitochondrial import inner membrane translo...	44	4e-04
16	TI17B_MOUSE (Q9Z0V7) Mitochondrial import inner membrane translo...	43	9e-04
17	TI17A_HUMAN (Q99595) Mitochondrial import inner membrane translo...	42	0.001
18	TI17B_HUMAN (O60830) Mitochondrial import inner membrane translo...	42	0.002
19	TI17A_MOUSE (Q9Z0V8) Mitochondrial import inner membrane translo...	42	0.002
20	TI17A_RAT (O35092) Mitochondrial import inner membrane transloca...	41	0.003
21	TIM17_YEAST (P39515) Mitochondrial import inner membrane translo...	39	0.013
22	NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alph...	39	0.017
23	TIM17_ARATH (Q9SP35) Mitochondrial import inner membrane translo...	37	0.038
24	TIM17_CAEEL (O44477) Probable mitochondrial import inner membran...	36	0.084
25	TI17D_DROME (Q9VN97) Probable mitochondrial import inner membran...	34	0.32
26	CAR15_PANTR (Q53B87) Caspase recruitment domain-containing prote...	33	0.54
27	CAR15_HUMAN (Q9HC29) Caspase recruitment domain-containing prote...	33	0.54
28	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	33	0.54
29	TIM17_NEUCR (P59670) Mitochondrial import inner membrane translo...	33	0.71
30	TI17A_DROME (Q9VNA0) Probable mitochondrial import inner membran...	33	0.71
31	TIM17_SCHPO (P87130) Mitochondrial import inner membrane translo...	33	0.71
32	TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding prote...	32	1.2
33	PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precu...	32	1.2
34	RS3_AMBME (P79891) 40S ribosomal protein S3	32	2.1
35	YPHP_BACSU (P54170) Hypothetical protein yphP	31	3.5
36	HGD_XANAC (Q8PQ74) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) ...	31	3.5
37	TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)	31	3.5
38	HGD_XANCP (Q8PDA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) ...	31	3.5
39	HGD_XANC8 (Q4UZI9) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) ...	31	3.5
40	HGD_XANC5 (Q3BYE8) Homogentisate 1,2-dioxygenase (EC 1.13.11.5) ...	31	3.5
41	ODO2_MYCTU (P65633) Dihydrolipoyllysine-residue succinyltransfer...	30	4.6
42	ODO2_MYCBO (P65634) Dihydrolipoyllysine-residue succinyltransfer...	30	4.6
43	BSP1_YEAST (Q06604) Protein BSP1 (Binding of synaptojanin polyph...	30	4.6
44	TI17C_DROME (Q9VGA2) Probable mitochondrial import inner membran...	30	4.6
45	SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF	30	6.0
46	PGH2_CAVPO (P70682) Prostaglandin G/H synthase 2 precursor (EC 1...	30	7.9
47	HXD10_HETFR (Q9IA14) Homeobox protein Hox-D10	30	7.9
48	INT2_HUMAN (Q9H0H0) Integrator complex subunit 2 (Int2)	30	7.9
49	17KD_RICTY (P22882) 17 kDa surface antigen precursor	30	7.9
50	INT2_MOUSE (Q80UK8) Integrator complex subunit 2 (Int2)	30	7.9

>TIM22_ASPOR (Q2UAP8) Mitochondrial import inner membrane translocase subunit|
           tim22
          Length = 184

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 32/79 (40%), Positives = 45/79 (56%)
 Frame = +1

Query: 76  KKGFKGSLGNAGSSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGT 255
           ++GFK     + SSAK+F ++  + S   C +  LR K+D+ NS I+GC TG  L     
Sbjct: 97  RRGFKDMGSRSWSSAKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGILGAKAG 156

Query: 256 PQALLQNCATFAAFSCIME 312
           PQA    CA FAAFS  ++
Sbjct: 157 PQAAAAGCAGFAAFSAAID 175

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>TIM22_YARLI (Q6BZY4) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 189

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = +1

Query: 106 AGSSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCAT 285
           A SSAK+F  + GV S   C +  LR K+DI N   AGC TG  L+    PQA L  CA 
Sbjct: 104 AWSSAKNFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGGGLAVKAGPQAALVGCAG 163

Query: 286 FAAFSCIME 312
           FAAFS  ++
Sbjct: 164 FAAFSAAID 172

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>TIM22_KLULA (Q6CRJ6) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = +1

Query: 112 SSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFA 291
           SSAK+F  +  + S V C++  LR K+DI N   AGC TG  L++   PQA L  CA FA
Sbjct: 113 SSAKNFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLAYKSGPQAALVGCAGFA 172

Query: 292 AFSCIME 312
           AFS  ++
Sbjct: 173 AFSTAID 179

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>TIM22_CANGA (Q6FT37) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 193

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 32/75 (42%), Positives = 43/75 (57%)
 Frame = +1

Query: 106 AGSSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCAT 285
           A SSAK+F  +  + + V C +  LR K+DI N   AGC TG  L++   PQA L  CA 
Sbjct: 108 AYSSAKNFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGLAYKSGPQAALVGCAG 167

Query: 286 FAAFSCIMEGLNKQQ 330
           FAAFS  ++   K +
Sbjct: 168 FAAFSAAIDMYMKSE 182

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>TIM22_NEUCR (Q9C1E8) Mitochondrial import inner membrane translocase subunit|
           tim-22
          Length = 194

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 45/79 (56%)
 Frame = +1

Query: 76  KKGFKGSLGNAGSSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGT 255
           K GFK     + S+AK+FA +  + S + C +  LR K+D+ N   AGC TG  L+  G 
Sbjct: 106 KHGFKDMGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAILAKNGG 165

Query: 256 PQALLQNCATFAAFSCIME 312
           PQA    CA FAAFS  ++
Sbjct: 166 PQAAAVGCAGFAAFSAAID 184

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>TIM22_DEBHA (Q6BT35) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 182

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 32/67 (47%), Positives = 38/67 (56%)
 Frame = +1

Query: 112 SSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFA 291
           SSAK+F  +  V S V C +  LR K DI N   AGC TG  L+    PQA L  CA FA
Sbjct: 99  SSAKNFGYIGMVYSGVECAIESLRAKHDIYNGVSAGCITGGGLAIRAGPQAALVGCAGFA 158

Query: 292 AFSCIME 312
           AFS  ++
Sbjct: 159 AFSTAID 165

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>TIM22_ASHGO (Q75E80) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 201

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 30/69 (43%), Positives = 40/69 (57%)
 Frame = +1

Query: 106 AGSSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCAT 285
           A SSAK+F  +  + S V C +  LR K+D+ N   AGC TG  L++   P A L  CA 
Sbjct: 116 AYSSAKNFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGLAYKSGPSAALIGCAG 175

Query: 286 FAAFSCIME 312
           FAAFS  ++
Sbjct: 176 FAAFSTAID 184

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>TIM22_XENTR (Q5M7K0) Mitochondrial import inner membrane translocase subunit|
           Tim22
          Length = 186

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
 Frame = +1

Query: 25  GGAFVGSIFG-YGQGLLTKKGFKGS--------------LGNAGSS-AKSFAVLSGVQSL 156
           GG  +G  FG +  G+ T  GF                 +G  G S AK+FA++  + S 
Sbjct: 71  GGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAKEVLKDMGQRGMSYAKNFAIVGAMFSC 130

Query: 157 VLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIME 312
             CL+   RGK D  NS I+GC TG A+ F    +A    C  FAAFS +++
Sbjct: 131 TECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAGALGCGGFAAFSAVID 182

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>TIM22_XENLA (Q5U4U5) Mitochondrial import inner membrane translocase subunit|
           Tim22
          Length = 184

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
 Frame = +1

Query: 25  GGAFVGSIFG-YGQGLLTKKGFKGS--------------LGNAGSS-AKSFAVLSGVQSL 156
           GG  +G  FG +  G+ T  GF                 +G  G S AK+FA++  + S 
Sbjct: 69  GGFVLGGAFGVFTAGIDTNVGFDPKDPLRTPTAKEVLRDMGQRGMSYAKNFAIVGAMFSC 128

Query: 157 VLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIME 312
             CL+   RGK D  NS ++GC TG A+ F    +A +  C  FAAFS +++
Sbjct: 129 TECLVESYRGKSDWKNSVMSGCITGGAIGFRAGLKAGVLGCGGFAAFSAVID 180

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>TIM22_BOVIN (Q5BIN4) Mitochondrial import inner membrane translocase subunit|
           Tim22
          Length = 194

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
 Frame = +1

Query: 25  GGAFVGSIFG-YGQGLLTKKGFKGS--------------LGNAGSS-AKSFAVLSGVQSL 156
           GG  +G  FG +  G+ T  GF                 +G  G S AK+FA++  + S 
Sbjct: 79  GGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAREVLKDMGQRGMSYAKNFAIVGAMFSC 138

Query: 157 VLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIME 312
             CL+   RGK D  NS I+GC TG A+ F    +A +  C  FAAFS  ++
Sbjct: 139 TECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAGVIGCGGFAAFSAAID 190

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>TIM22_MOUSE (Q9CQ85) Mitochondrial import inner membrane translocase subunit|
           Tim22
          Length = 194

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
 Frame = +1

Query: 25  GGAFVGSIFG-YGQGLLTKKGFKGS--------------LGNAGSS-AKSFAVLSGVQSL 156
           GG  +G  FG +  G+ T  GF                 +G  G S AK+FA++  + S 
Sbjct: 79  GGFVLGGAFGIFTAGIDTNVGFDPKDPYRTPTAKEVLKDMGQRGMSYAKNFAIVGAMFSC 138

Query: 157 VLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIME 312
             CL+   RGK D  NS I+GC TG A+ F    +A    C  FAAFS  ++
Sbjct: 139 TECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGAIGCGGFAAFSAAID 190

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>TIM22_RAT (Q9JKW1) Mitochondrial import inner membrane translocase subunit|
           Tim22
          Length = 192

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
 Frame = +1

Query: 25  GGAFVGSIFG-YGQGLLTKKGFKGS--------------LGNAGSS-AKSFAVLSGVQSL 156
           GG  +G  FG +  G+ T  GF                 +G  G S AK+FA++  + S 
Sbjct: 77  GGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAREVLKDMGQRGMSYAKNFAIVGAMFSC 136

Query: 157 VLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIME 312
             CL+   RGK D  NS I+GC TG A+ F    +A    C  FAAFS  ++
Sbjct: 137 TECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGAIGCGGFAAFSAAID 188

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>TIM22_YEAST (Q12328) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 207

 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 28/67 (41%), Positives = 39/67 (58%)
 Frame = +1

Query: 112 SSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFA 291
           SSAK+F  +  + + V C++  LR K+DI N   AG  TG  L++   PQA L   A FA
Sbjct: 124 SSAKNFGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAGPQAALMGGAGFA 183

Query: 292 AFSCIME 312
           AFS  ++
Sbjct: 184 AFSAAID 190

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>TIM22_HUMAN (Q9Y584) Mitochondrial import inner membrane translocase subunit|
           Tim22 (Testis-expressed sequence 4)
          Length = 194

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
 Frame = +1

Query: 25  GGAFVGSIFG-YGQGLLTKKGFKGS--------------LGNAGSS-AKSFAVLSGVQSL 156
           GG  +G  FG +  G+ T  GF                 +G  G S AK+FA++  + S 
Sbjct: 79  GGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAKEVLKDMGQRGMSYAKNFAIVGAMFSC 138

Query: 157 VLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIME 312
             CL+   RG  D  NS I+GC TG A+ F    +A    C  FAAFS  ++
Sbjct: 139 TECLIESYRGTSDWKNSVISGCITGGAIGFRAGLKAGAIGCGGFAAFSAAID 190

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>TIM22_CRYNE (Q5KKL8) Mitochondrial import inner membrane translocase subunit|
           TIM22
          Length = 187

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 29/72 (40%), Positives = 35/72 (48%)
 Frame = +1

Query: 85  FKGSLGNAGSSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQA 264
           FK    N  SS + FA +  V S V C +   R K+DI N   AG  TG  L+    P A
Sbjct: 101 FKEMGRNMWSSGRGFAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAILARNAGPTA 160

Query: 265 LLQNCATFAAFS 300
           +L     FAAFS
Sbjct: 161 MLGGGVAFAAFS 172

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>TI17B_MOUSE (Q9Z0V7) Mitochondrial import inner membrane translocase subunit|
           Tim17-B
          Length = 172

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 14/149 (9%)
 Frame = +1

Query: 16  DFAGGAFVGSIFGYGQGLLTK----------KGFKGSLG----NAGSSAKSFAVLSGVQS 153
           D  GGAF   + G G     K            F+GS+      A     SFAV  G+ S
Sbjct: 15  DDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQIGGSFAVWGGLFS 74

Query: 154 LVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQT 333
            + C L +LRGK+D  NS  +G  TG  L+    P A++ +         ++EG+     
Sbjct: 75  TIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGV----- 129

Query: 334 AMAHTLAGNALTTFAHDKGGVLPPFTLPP 420
                  G  LT +   +    PPF   P
Sbjct: 130 -------GILLTRYTAQQFRNAPPFLEDP 151

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>TI17A_HUMAN (Q99595) Mitochondrial import inner membrane translocase subunit|
           Tim17-A (Inner membrane preprotein translocase Tim17a)
          Length = 171

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 46/149 (30%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
 Frame = +1

Query: 16  DFAGGAFVGSIFGYGQGLLTKKGFK-----------GSLGNAGSSAK----SFAVLSGVQ 150
           D  GGAF     G G      KGF+           GSL    + A     SFAV  G+ 
Sbjct: 15  DDCGGAFTMGTIGGGI-FQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLF 73

Query: 151 SLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQ 330
           S++ C + ++RGK+D  NS  +G  TG  L+    P A++ + A       ++EG     
Sbjct: 74  SMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILL 133

Query: 331 TAMAHTLAGNALTTFAHDKGGVLPPFTLP 417
           T  A     N    FA D    LP   LP
Sbjct: 134 TRFASAQFPNG-PQFAEDP-SQLPSTQLP 160

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>TI17B_HUMAN (O60830) Mitochondrial import inner membrane translocase subunit|
           Tim17-B
          Length = 172

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
 Frame = +1

Query: 16  DFAGGAFVGSIFGYGQGLLTKKGFKGS-------LGNAGSSAK--------SFAVLSGVQ 150
           D  GGAF   + G G      KGF+ +       L  + ++ +        SFAV  G+ 
Sbjct: 15  DDCGGAFTMGVIGGGV-FQAIKGFRNAPVGIRHRLRGSANAVRIRAPQIGGSFAVWGGLF 73

Query: 151 SLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQ 330
           S + C L +LRGK+D  NS  +G  TG  L+    P A++ +         ++EG+    
Sbjct: 74  STIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGV---- 129

Query: 331 TAMAHTLAGNALTTFAHDKGGVLPPFTLPP 420
                   G  LT +   +    PPF   P
Sbjct: 130 --------GILLTRYTAQQFRNAPPFLEDP 151

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>TI17A_MOUSE (Q9Z0V8) Mitochondrial import inner membrane translocase subunit|
           Tim17-A (Inner membrane preprotein translocase Tim17a)
          Length = 171

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 45/147 (30%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
 Frame = +1

Query: 16  DFAGGAFVGSIFGYGQGLLTKKGFK-----------GSLGNAGSSAK----SFAVLSGVQ 150
           D  GGAF     G G      KGF+           GSL    + A     SFAV  G+ 
Sbjct: 15  DDCGGAFTMGTIGGGI-FQAFKGFRNSPVGINHRLRGSLTAIKTRAPQLGGSFAVWGGLF 73

Query: 151 SLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQ 330
           S + C + ++RGK+D  NS  +G  TG  L+    P A++ + A       ++EG     
Sbjct: 74  STIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEG----- 128

Query: 331 TAMAHTLAGNALTTFAHDKGGVLPPFT 411
                  AG  LT FA  +    P FT
Sbjct: 129 -------AGILLTRFASAQFPNGPQFT 148

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>TI17A_RAT (O35092) Mitochondrial import inner membrane translocase subunit|
           Tim17-A (Inner membrane preprotein translocase Tim17a)
          Length = 171

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 46/149 (30%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
 Frame = +1

Query: 16  DFAGGAFVGSIFGYGQGLLTKKGFK-----------GSLGNAGSSAK----SFAVLSGVQ 150
           D  GGAF     G G      KGF+           GSL    + A     SFAV  G+ 
Sbjct: 15  DDCGGAFTMGTIGGGI-FQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLF 73

Query: 151 SLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQ 330
           S + C + ++RGK+D  NS  +G  TG  L+    P A++ + A       ++EG     
Sbjct: 74  STIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILL 133

Query: 331 TAMAHTLAGNALTTFAHDKGGVLPPFTLP 417
           T  A     N    FA D    LP   LP
Sbjct: 134 TRFASAQFPNG-PQFAEDH-SQLPSSQLP 160

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>TIM17_YEAST (P39515) Mitochondrial import inner membrane translocase subunit|
           TIM17 (Mitochondrial protein import protein 2)
           (Mitochondrial inner membrane protein MIM17)
          Length = 158

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
 Frame = +1

Query: 16  DFAGGAFVGSIFGY-GQGLLTKKGFKGS-LGNAGSSAKS------------FAVLSGVQS 153
           DF G   +G+I G    G+   KGF+ S LG  GS A S            F V  G+ S
Sbjct: 17  DFGGAFAMGAIGGVVWHGI---KGFRNSPLGERGSGAMSAIKARAPVLGGNFGVWGGLFS 73

Query: 154 LVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGL 318
              C ++ +R ++D  N+ IAG  TG AL+  G  +    +  T A    ++EG+
Sbjct: 74  TFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGGWRHTRNSSITCACLLGVIEGV 128

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>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,|
            muscle-specific form (Alpha-NAC, muscle-specific form)
          Length = 2187

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
 Frame = -1

Query: 251  PGKLKARPVQQPAMPELIISSFPRSFLNKHKTKLWTP---DRTAKLLAEDPALPSEPLKP 81
            P  +   P +QP     ++ S P S L    +KL  P   D    L+  +     EP +P
Sbjct: 1913 PSPVAPLPPKQP-----LLESAPGSVLES-PSKLPVPAEEDELPPLIPPEAVSGGEPFQP 1966

Query: 80   FLVSKPCPYPKIDPTKAPPAKSPLV 6
             LV+ P P P   P  AP AK P++
Sbjct: 1967 ILVNMPAPKPAGTPAPAPSAKQPVL 1991

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>TIM17_ARATH (Q9SP35) Mitochondrial import inner membrane translocase subunit|
           Tim17
          Length = 243

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = +1

Query: 13  GDFAGGAFVGSIFGYGQGLLTKKGFKGSLG-------NAGSSAKSFAVLSGVQSLVLCLL 171
           G F  GA  GS F + +G          +G       NA  +  SFAV  G+ S   C +
Sbjct: 21  GAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFAVWGGLFSTFDCTM 80

Query: 172 RKLRGKDDIINSGIAGCCTGLALS 243
             LR K+D  NS IAG  TG  LS
Sbjct: 81  VYLRQKEDPWNSIIAGAATGGFLS 104

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>TIM17_CAEEL (O44477) Probable mitochondrial import inner membrane translocase|
           subunit Tim17
          Length = 181

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
 Frame = +1

Query: 19  FAGGAFVGSIF----GYGQGLLTKK--GFKGSLGNAGS-SAKSFAVLSGVQSLVLCLLRK 177
           FA G   GSIF    GY      KK  G    +    + +   FA   G+ S + C L  
Sbjct: 21  FAMGLVGGSIFQAFGGYKNAAKGKKLVGMMREVRMRSTLTGVQFAAWGGMFSTIDCCLVA 80

Query: 178 LRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGL 318
           +R K+D INS ++G  TG  L+    P+ +  +    +    ++EG+
Sbjct: 81  IRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGSVILAMIEGV 127

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>TI17D_DROME (Q9VN97) Probable mitochondrial import inner membrane translocase|
           subunit Tim17 4
          Length = 224

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 9/135 (6%)
 Frame = +1

Query: 19  FAGGAFVGSIFGYGQGLLT-----KKGFKGSLGNAG----SSAKSFAVLSGVQSLVLCLL 171
           F  G   GS+F Y +G        ++G  G + +      + A SFA+     S V C++
Sbjct: 20  FMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAIAGSFAIWGATFSTVDCVM 79

Query: 172 RKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQTAMAHTL 351
              R ++D  N+ ++G  TG  L+     +A+  +         ++EG            
Sbjct: 80  VSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAMLEG------------ 127

Query: 352 AGNALTTFAHDKGGV 396
           AG A+ T     GGV
Sbjct: 128 AGAAVATIYASDGGV 142

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>CAR15_PANTR (Q53B87) Caspase recruitment domain-containing protein 15|
          Length = 1040

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 28/131 (21%), Positives = 49/131 (37%)
 Frame = +1

Query: 1    FGTRGDFAGGAFVGSIFGYGQGLLTKKGFKGSLGNAGSSAKSFAVLSGVQSLVLCLLRKL 180
            +G R    G   +    G  Q L        ++G+ G+ A +  +   V    LCL    
Sbjct: 907  WGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCL---- 962

Query: 181  RGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQTAMAHTLAGN 360
              ++ + + G+     GL  +       L  NC T+     +++ L +  T +   L GN
Sbjct: 963  -EENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1021

Query: 361  ALTTFAHDKGG 393
              +    DK G
Sbjct: 1022 TFSLEEVDKLG 1032

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>CAR15_HUMAN (Q9HC29) Caspase recruitment domain-containing protein 15 (Nod2|
            protein) (Inflammatory bowel disease protein 1)
          Length = 1040

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 28/131 (21%), Positives = 49/131 (37%)
 Frame = +1

Query: 1    FGTRGDFAGGAFVGSIFGYGQGLLTKKGFKGSLGNAGSSAKSFAVLSGVQSLVLCLLRKL 180
            +G R    G   +    G  Q L        ++G+ G+ A +  +   V    LCL    
Sbjct: 907  WGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCL---- 962

Query: 181  RGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQTAMAHTLAGN 360
              ++ + + G+     GL  +       L  NC T+     +++ L +  T +   L GN
Sbjct: 963  -EENHLQDEGVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGN 1021

Query: 361  ALTTFAHDKGG 393
              +    DK G
Sbjct: 1022 TFSLEEVDKLG 1032

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 110 PALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSPLVP 3
           P  PS P  P   S P P P + P+ APP+ SP VP
Sbjct: 126 PPSPSPPAPPS-PSPPSPAPPLPPSPAPPSPSPPVP 160



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 110 PALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSPLVP 3
           P  PS P+ P   + P P P + P+ APP+ +P VP
Sbjct: 178 PPSPSPPVPPS-PAPPSPAPPVPPSPAPPSPAPPVP 212



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 110 PALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSPLVP 3
           P +P  P  P   S P P P   P+ APP+ SP  P
Sbjct: 209 PPVPPSPAPP---SPPSPAPPSPPSPAPPSPSPPAP 241

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>TIM17_NEUCR (P59670) Mitochondrial import inner membrane translocase subunit|
           tim-17
          Length = 155

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
 Frame = +1

Query: 13  GDFAGGAFVGSIFGYGQGLLTKKGFKGSLG-------NAGSSAKSFAVLSGVQSLVLCLL 171
           G FA GA  G+I+   +G       +  +G        A +   +F V  G+ S   C +
Sbjct: 18  GAFAMGAIGGTIWHGIKGFRNSPYGERRIGAITAIKMRAPALGGNFGVWGGLFSTFDCAI 77

Query: 172 RKLRG-KDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGL 318
           + LR  K+D  NS +AG  TG AL+  G  +A        A    ++EG+
Sbjct: 78  KGLRNHKEDPWNSILAGFFTGGALAVRGGYKAARNGAIGCAVLLAVIEGV 127

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>TI17A_DROME (Q9VNA0) Probable mitochondrial import inner membrane translocase|
           subunit Tim17 1
          Length = 179

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
 Frame = +1

Query: 13  GDFAGGAFVGSIFGY-----GQGLLTKKGFKGSLGNAGSSAKSFAVLSGVQSLVLCLLRK 177
           G   GGAF  +I G+     G G     G       +G    +FAV     S + C L  
Sbjct: 24  GALGGGAFQ-AIKGFRNAPSGLGYRLSGGLAAVRARSGLVGGNFAVWGATFSAIDCSLVY 82

Query: 178 LRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGL 318
            R K+D  N+ I+G  TG  L+      ++L +     A   ++EG+
Sbjct: 83  FRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGV 129

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>TIM17_SCHPO (P87130) Mitochondrial import inner membrane translocase subunit|
           tim17 (Mitochondrial protein import protein 2)
          Length = 164

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = +1

Query: 124 SFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSC 303
           +F V  G+ S   C ++ +R K+D  N+ IAG  TG AL+  G  +A        A    
Sbjct: 65  NFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGGWRATRNGAIGCACILA 124

Query: 304 IMEGL 318
           + EGL
Sbjct: 125 VFEGL 129

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>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = -1

Query: 116 EDPALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSPLVP 3
           E+  LPS PL P + S P P P    T  PP  SPL P
Sbjct: 34  EEAKLPSPPLTPPVPSPPPPLPP-PSTSPPPPASPLPP 70

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>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
 Frame = -1

Query: 230 PVQQPAMPELIISSFPRSFLNKHKTKLWTPDRTAKLLAEDPALPSEP---LKPFLVSKPC 60
           P +QP  P   + +   S   +  TK   P   AK   + P LP  P     P +   P 
Sbjct: 193 PAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAK---KSPLLPPPPPVAYPPVMTPSPS 249

Query: 59  PY---PKIDPTKAPPAKSPLVP 3
           P    P I P  +PPA  PL+P
Sbjct: 250 PAAEPPIIAPFPSPPANPPLIP 271



 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -1

Query: 143 PDRTAKLLAEDPAL--PSEPLKPFLVSKPCPYP-KIDPTKAPPAKSP 12
           PD++AK   + P    PS P  P  V  P P P K  P   PP K+P
Sbjct: 161 PDQSAKQPPQPPPAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAP 207

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>RS3_AMBME (P79891) 40S ribosomal protein S3|
          Length = 253

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 143 PDRTAKLLAEDPALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSPLVP 3
           PD  + +  +D  LP+ P+      KP P     P + PPA  P VP
Sbjct: 205 PDHVSIVEPKDEILPTTPISEQKGGKPDPQVPQQPPQQPPAMPPPVP 251

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>YPHP_BACSU (P54170) Hypothetical protein yphP|
          Length = 144

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 169 LRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFAAFSCIMEGLNKQQTA 336
           + K  G   ++ + + GC  GLA   P   QA+LQN  T      +  G +K+ TA
Sbjct: 38  MEKAEGTTLVVVNSVCGCAAGLAR--PAATQAVLQNDKTPDNTVTVFAGQDKEATA 91

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>HGD_XANAC (Q8PQ74) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 458

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
 Frame = +3

Query: 123 KFCGSIWCPEFGFVLVEEAAWER*YYQFRHCWLLHRSCFEFSRYTTSAASELRH----LR 290
           KF G +W  + G   ++  AW   Y  +R         ++  R+ T  +    H    + 
Sbjct: 264 KFQGHLWRADIGHSPLDVVAWHGNYAPYR---------YDLRRFNTIGSISFDHPDPSIF 314

Query: 291 SILVHHGGVEQAADRDGA--HPRWECLDNLCARQGRRPPSFH 410
           ++L         A+ D A   PRW     L A+   RPP FH
Sbjct: 315 TVLTSPSDTHGTANMDFAIFPPRW-----LVAQHTFRPPWFH 351

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>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)|
          Length = 1387

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 4    GTRGDFAGGAFVGSIFGYGQGLLTKKGFKGSLGNA 108
            GT   F GG   G+  G+G GL T  GF G LG +
Sbjct: 1200 GTSAGFGGGP--GTSTGFGGGLGTSAGFSGGLGTS 1232

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>HGD_XANCP (Q8PDA2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 455

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
 Frame = +3

Query: 123 KFCGSIWCPEFGFVLVEEAAWER*YYQFRHCWLLHRSCFEFSRYTTSAASELRH----LR 290
           KF G +W  + G   ++  AW   Y  +R         ++  R+ T  +    H    + 
Sbjct: 264 KFQGHLWRADIGHSPLDVVAWHGNYAPYR---------YDLRRFNTIGSISFDHPDPSIF 314

Query: 291 SILVHHGGVEQAADRDGA--HPRWECLDNLCARQGRRPPSFH 410
           ++L         A+ D A   PRW     L A+   RPP FH
Sbjct: 315 TVLTSPSDTHGTANMDFAIFPPRW-----LVAQHTFRPPWFH 351

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>HGD_XANC8 (Q4UZI9) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 455

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
 Frame = +3

Query: 123 KFCGSIWCPEFGFVLVEEAAWER*YYQFRHCWLLHRSCFEFSRYTTSAASELRH----LR 290
           KF G +W  + G   ++  AW   Y  +R         ++  R+ T  +    H    + 
Sbjct: 264 KFQGHLWRADIGHSPLDVVAWHGNYAPYR---------YDLRRFNTIGSISFDHPDPSIF 314

Query: 291 SILVHHGGVEQAADRDGA--HPRWECLDNLCARQGRRPPSFH 410
           ++L         A+ D A   PRW     L A+   RPP FH
Sbjct: 315 TVLTSPSDTHGTANMDFAIFPPRW-----LVAQHTFRPPWFH 351

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>HGD_XANC5 (Q3BYE8) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 439

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
 Frame = +3

Query: 123 KFCGSIWCPEFGFVLVEEAAWER*YYQFRHCWLLHRSCFEFSRYTTSAASELRH----LR 290
           KF G +W  + G   ++  AW   Y  +R         ++  R+ T  +    H    + 
Sbjct: 245 KFQGHLWRADIGHSPLDVVAWHGNYAPYR---------YDLRRFNTIGSISFDHPDPSIF 295

Query: 291 SILVHHGGVEQAADRDGA--HPRWECLDNLCARQGRRPPSFH 410
           ++L         A+ D A   PRW     L A+   RPP FH
Sbjct: 296 TVLTSPSDTHGTANMDFAIFPPRW-----LVAQHTFRPPWFH 332

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>ODO2_MYCTU (P65633) Dihydrolipoyllysine-residue succinyltransferase component|
           of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
           (E2) (Dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase complex)
          Length = 553

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 119 AEDPALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSP 12
           A+  A P+    P  V +P P PK +P  +PPA  P
Sbjct: 199 ADIGAAPAPKPAPKPVPEPAPTPKAEPAPSPPAAQP 234

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>ODO2_MYCBO (P65634) Dihydrolipoyllysine-residue succinyltransferase component|
           of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
           (E2) (Dihydrolipoamide succinyltransferase component of
           2-oxoglutarate dehydrogenase complex)
          Length = 553

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 119 AEDPALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSP 12
           A+  A P+    P  V +P P PK +P  +PPA  P
Sbjct: 199 ADIGAAPAPKPAPKPVPEPAPTPKAEPAPSPPAAQP 234

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>BSP1_YEAST (Q06604) Protein BSP1 (Binding of synaptojanin polyphosphoinositide|
           phosphatase domain protein 1)
          Length = 576

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
 Frame = -1

Query: 254 VPGKLK-ARPVQQPAMPELIISSFPRSFLNKHKT---KLWTPDRTAKL----LAEDPALP 99
           VP ++K A PV +   P   +SS   + L K K+   ++ TP  T K       +   L 
Sbjct: 232 VPERVKPAPPVSRSTKPASFLSSLEDNKLTKAKSYNSEMETPKTTVKSSHIDYLDSIQLK 291

Query: 98  SEPLKPFLVSKPCPYPKIDPTKAPPAKSPLV 6
              L P + +KP P P   P K  P     +
Sbjct: 292 PTTLSPTMKNKPKPTPPSPPAKRIPRSESFI 322

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>TI17C_DROME (Q9VGA2) Probable mitochondrial import inner membrane translocase|
           subunit Tim17 3
          Length = 222

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
 Frame = +1

Query: 112 SSAKSFAVLSGVQSLVLCLLRKLRGKDDIINSGIAGCCTGLALSFPGTPQALLQNCATFA 291
           S A SFAV     S V C L   R ++D  NS ++G  TG  L+     +A+  +     
Sbjct: 60  SIAGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGC 119

Query: 292 AFSCIMEGLNKQQTAMAHTLAGNALTTF-AHDKG 390
               ++EG            AG A+ T  A DKG
Sbjct: 120 LVLAMIEG------------AGAAVATINAADKG 141

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>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 12/115 (10%)
 Frame = -1

Query: 320 FNPSMMHENAAKVAQF*SSACGVPGKLKAR---------PVQQPAM---PELIISSFPRS 177
           + P+   +N+     F   + G P  L A          P   P     P       P+S
Sbjct: 10  YRPNNNQQNSGGPPNFVPGSQGNPNSLAANMQNLNINRPPPPMPGSGPRPSPPFGQSPQS 69

Query: 176 FLNKHKTKLWTPDRTAKLLAEDPALPSEPLKPFLVSKPCPYPKIDPTKAPPAKSP 12
           F  + + +   P   A+     PA  + P  P  VS+P  +P +    APP+  P
Sbjct: 70  FPQQQQQQQPRPSPMARPGPPPPAAMARPGGPPQVSQPGGFPPVGRPVAPPSNQP 124

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>PGH2_CAVPO (P70682) Prostaglandin G/H synthase 2 precursor (EC 1.14.99.1)|
           (Cyclooxygenase-2) (COX-2) (Prostaglandin-endoperoxide
           synthase 2) (Prostaglandin H2 synthase 2) (PGH synthase
           2) (PGHS-2) (PHS II)
          Length = 604

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 437 SDTSRIGGRVKGGRTPPLSCAKVVKA 360
           S T +I GRV GGR  PL+  +V KA
Sbjct: 411 SFTKQIAGRVAGGRNVPLAVQRVAKA 436

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>HXD10_HETFR (Q9IA14) Homeobox protein Hox-D10|
          Length = 336

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 227 VQQPAMPELIISSFPRSFLNKHKTKLWTPDRTAKLLAEDPALPSEPLKPFLVSKPC 60
           ++QP  P++   SFP S   +    ++  D+ AKL     A+P+ P    LVS+ C
Sbjct: 89  IEQPVTPQMPTCSFPASVKEESTCCMYNSDKRAKL--NPTAIPAYPR---LVSENC 139

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>INT2_HUMAN (Q9H0H0) Integrator complex subunit 2 (Int2)|
          Length = 1204

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 421 ILDVSDAFSSCCQALVVNPKKH*TASLGGRGR-DMLR 528
           + +V D+F+  C+ L+ N ++    SLGGR R D LR
Sbjct: 215 VANVPDSFNEVCRGLIKNGERQDEESLGGRRRTDALR 251

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>17KD_RICTY (P22882) 17 kDa surface antigen precursor|
          Length = 159

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   GTRGDFAGGAFVGSIFGYGQGLLTKKGFKGSLG 102
           GT    AGGA +GS FG+G+G L   G    LG
Sbjct: 32  GTLLGGAGGALLGSQFGHGKGQLVGVGVGALLG 64

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>INT2_MOUSE (Q80UK8) Integrator complex subunit 2 (Int2)|
          Length = 1198

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 421 ILDVSDAFSSCCQALVVNPKKH*TASLGGRGR-DMLR 528
           + +V D+F+  C+ L+ N ++    SLGGR R D LR
Sbjct: 208 VANVPDSFNEVCRGLIKNGERQDEESLGGRRRTDALR 244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,451,325
Number of Sequences: 219361
Number of extensions: 1952472
Number of successful extensions: 6632
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 6085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6596
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result