ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags35f18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT019071.1| Zea mays clone Contig637.F mRNA sequence 202 1e-48
2gb|AY112385.1| Zea mays CL7234_1 mRNA sequence 194 2e-46
3ref|NM_196065.1| Oryza sativa (japonica cultivar-group) unknown ... 141 3e-30
4ref|XM_470578.1| Oryza sativa (japonica cultivar-group), predic... 123 7e-25
5dbj|AK069314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
6gb|AY105087.1| Zea mays PCO115466 mRNA sequence 70 1e-08
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 2e-07
8gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 66 2e-07
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
10dbj|AK101966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
11gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 geno... 64 6e-07
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 64 6e-07
14dbj|AK109451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
15gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.036
16gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, co... 44 0.55
17gb|DQ083922.1| Cortinarius splendens voucher TF2001-122 RNA poly... 42 2.2
18gb|AF538972.1| Homo sapiens CARD15 gene, promoter region and 5' ... 42 2.2
19emb|AJ303140.1|HSA303140 Homo sapiens NOD2 gene for LRR-containi... 42 2.2
20gb|AC007728.4|AC007728 Homo sapiens chromosome 16 clone RP11-327... 42 2.2
21gb|AC007608.7| Homo sapiens chromosome 16 clone RP11-401P9, comp... 42 2.2
22gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, com... 40 8.7
23gb|DQ083923.1| Cortinarius splendificus voucher TF2002-041 RNA p... 40 8.7
24gb|DQ083917.1| Cortinarius quercus-ilicis voucher TSJ2003-050 RN... 40 8.7
25gb|DQ083916.1| Cortinarius quercus-ilicis voucher TSJ2002-075 RN... 40 8.7
26gb|DQ083878.1| Cortinarius alcalinophilus voucher TSJ2003-097 RN... 40 8.7
27gb|DQ083877.1| Cortinarius alcalinophilus voucher TSJ2003-020 RN... 40 8.7
28gb|DQ083876.1| Cortinarius alcalinophilus voucher TF2001-086 RNA... 40 8.7
29gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 8.7
30gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 8.7
31ref|XM_868941.1| PREDICTED: Bos taurus similar to interleukin 28... 40 8.7
32emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, comple... 40 8.7
33gb|AC100154.9| Mus musculus chromosome 7, clone RP23-43N5, compl... 40 8.7
34gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome... 40 8.7
35gb|AC122169.24| Medicago truncatula clone mth2-9m5, complete seq... 40 8.7
36gb|AC145372.7| Medicago truncatula clone mth2-5f4, complete sequ... 40 8.7
37gb|AC162878.2| Mus musculus chromosome 7, clone RP24-316O13, com... 40 8.7
38gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, co... 40 8.7
39emb|BX470262.7| Zebrafish DNA sequence from clone CH211-120K20 i... 40 8.7
40gb|AC011131.6| Homo sapiens chromosome 8, clone RP11-351E7, comp... 40 8.7
41gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, com... 40 8.7
42gb|AC150889.3| Medicago truncatula chromosome 7 BAC clone mte1-6... 40 8.7
43gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 40 8.7
44emb|AL772302.20| Mouse DNA sequence from clone RP23-450F9 on chr... 40 8.7
45gb|AC090181.9| Homo sapiens chromosome 15, clone RP11-797A18, co... 40 8.7
46dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.7
47emb|AJ131740.1|CLA131740 Cuphea lanceolata FatB3 gene 40 8.7
48gb|AC136188.2| Homo sapiens 12 BAC RP11-633L8 (Roswell Park Canc... 40 8.7
49gb|AC007628.3|AC007628 Genomic sequence of Homo sapiens clone N0... 40 8.7
50gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, co... 40 8.7
51gb|AC138302.3| Mus musculus BAC clone RP24-554C14 from 3, comple... 40 8.7
52gb|AC145911.4| Gallus gallus BAC clone CH261-47H12 from chromoso... 40 8.7 
>gb|BT019071.1| Zea mays clone Contig637.F mRNA sequence
          Length = 951

 Score =  202 bits (102), Expect = 1e-48
 Identities = 264/318 (83%)
 Strand = Plus / Minus

                                                                       
Query: 13  ggggacttcgccggcggcgccttcgtcggatctatctttggatatggacaaggtttgcta 72
           ||||||||||  |||||||||||||| ||||| ||||| |||||||||||||| ||| | 
Sbjct: 761 ggggacttcggtggcggcgccttcgttggatccatcttcggatatggacaaggcttgatc 702

                                                                       
Query: 73  actaagaagggcttcaagggctcactcggcaatgcagggtcttctgccaaaagttttgcg 132
           || |||||||| || ||||||||| || ||||||||||||| |||||||| | |||||| 
Sbjct: 701 accaagaagggttttaagggctcattcagcaatgcagggtcctctgccaagacttttgca 642

                                                                       
Query: 133 gttctatctggtgtccagagtttggttttgtgcttgttgaggaagctgcgtgggaaagat 192
            |||| ||||| || |||||||||||||||||||||||| | | ||| ||||| || |||
Sbjct: 641 attctctctggcgttcagagtttggttttgtgcttgttgcgaaggctacgtggcaaggat 582

                                                                       
Query: 193 gatattatcaattccggcattgctggttgttgcacaggtcttgctttgagttttccaggt 252
           || ||| ||||| | || || ||||||||||| || || || |||||| | |||||||| 
Sbjct: 581 gacattgtcaatgctggtatagctggttgttgtactggcctcgctttgggctttccaggg 522

                                                                       
Query: 253 acaccacaagcgctgcttcagaattgcgccaccttcgcagcattctcgtgcatcatggag 312
            | ||||| ||  |||| || |  || |||||||||||||||||||| ||||||||||||
Sbjct: 521 gcgccacaggcattgctccaaagctgtgccaccttcgcagcattctcatgcatcatggag 462

                             
Query: 313 gggttgaacaagcagcag 330
           ||| | || |||||||||
Sbjct: 461 gggctcaataagcagcag 444
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>gb|AY112385.1| Zea mays CL7234_1 mRNA sequence
          Length = 729

 Score =  194 bits (98), Expect = 2e-46
 Identities = 254/306 (83%)
 Strand = Plus / Plus

                                                                       
Query: 25  ggcggcgccttcgtcggatctatctttggatatggacaaggtttgctaactaagaagggc 84
           |||||||||||||| ||||| ||||| |||||||||||||| ||| | || |||||||| 
Sbjct: 145 ggcggcgccttcgttggatccatcttcggatatggacaaggcttgatcaccaagaagggt 204

                                                                       
Query: 85  ttcaagggctcactcggcaatgcagggtcttctgccaaaagttttgcggttctatctggt 144
           || ||||||||| || ||||||||||| | |||||||| | |||||| ||||| ||||| 
Sbjct: 205 tttaagggctcattcagcaatgcaggggcctctgccaagacttttgcagttctctctggc 264

                                                                       
Query: 145 gtccagagtttggttttgtgcttgttgaggaagctgcgtgggaaagatgatattatcaat 204
           || ||||||||||||||| |||||||| | | ||| ||||| || ||||| ||| |||||
Sbjct: 265 gttcagagtttggttttgcgcttgttgcgaaggctacgtggcaaggatgacattgtcaat 324

                                                                       
Query: 205 tccggcattgctggttgttgcacaggtcttgctttgagttttccaggtacaccacaagcg 264
            | || || |||||||||||||| || || |||||| | ||||||||  | ||||| || 
Sbjct: 325 gctggtatagctggttgttgcactggcctcgctttgggctttccaggggcgccacaggca 384

                                                                       
Query: 265 ctgcttcagaattgcgccaccttcgcagcattctcgtgcatcatggaggggttgaacaag 324
            |||| || |  || || ||||||||||||||||||||||||||||||||| | || |||
Sbjct: 385 ttgctccaaagctgtgctaccttcgcagcattctcgtgcatcatggaggggctcaataag 444

                 
Query: 325 cagcag 330
           ||||||
Sbjct: 445 cagcag 450
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>ref|NM_196065.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0089F16.6), mRNA
          Length = 868

 Score =  141 bits (71), Expect = 3e-30
 Identities = 242/299 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  ggggacttcgccggcggcgccttcgtcggatctatctttggatatggacaaggtttgcta 72
           |||||| |||||| ||||||||||||||| ||  || | ||||| || ||||||||||| 
Sbjct: 170 ggggacctcgccgccggcgccttcgtcggctccctcgtcggatacgggcaaggtttgctc 229

                                                                       
Query: 73  actaagaagggcttcaagggctcactcggcaatgcagggtcttctgccaaaagttttgcg 132
           ||||| || ||  | ||||| |||||| ||| ||| || ||||||||||| | ||| || 
Sbjct: 230 actaacaaaggtatgaagggttcactcagcagtgctggatcttctgccaagactttcgca 289

                                                                       
Query: 133 gttctatctggtgtccagagtttggttttgtgcttgttgaggaagctgcgtgggaaagat 192
           |  || ||||||||||| |||||  |  |||||||| |||| |   |||| |||||||||
Sbjct: 290 gcactgtctggtgtccaaagttttatcctgtgcttgctgagaagattgcgagggaaagat 349

                                                                       
Query: 193 gatattatcaattccggcattgctggttgttgcacaggtcttgctttgagttttccaggt 252
           ||||| |||||| | ||| | ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 350 gatatgatcaatgctggcgtggctggttgttgcacaggacttgctttgagctttccaggt 409

                                                                      
Query: 253 acaccacaagcgctgcttcagaattgcgccaccttcgcagcattctcgtgcatcatgga 311
            |||| |||||| || | || |  || | ||||||||| |||||||| |||||||||||
Sbjct: 410 gcaccgcaagcgatgttccacagctgtgtcaccttcgcggcattctcttgcatcatgga 468
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>ref|XM_470578.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 585

 Score =  123 bits (62), Expect = 7e-25
 Identities = 152/182 (83%)
 Strand = Plus / Plus

                                                                       
Query: 149 agagtttggttttgtgcttgttgaggaagctgcgtgggaaagatgatattatcaattccg 208
           ||||| ||||| ||||||||||||| | |||||| || |||||||| ||| | ||| | |
Sbjct: 251 agagtctggttgtgtgcttgttgagaaggctgcgcggcaaagatgacattgttaatgctg 310

                                                                       
Query: 209 gcattgctggttgttgcacaggtcttgctttgagttttccaggtacaccacaagcgctgc 268
           | || |||||||||||||| || ||||||||||| |||||||| |||||||||||  |||
Sbjct: 311 ggatagctggttgttgcactggccttgctttgagctttccaggaacaccacaagccttgc 370

                                                                       
Query: 269 ttcagaattgcgccaccttcgcagcattctcgtgcatcatggaggggttgaacaagcagc 328
           | || |  || || ||||| ||||||||||| ||||||||||||||| | ||||| ||||
Sbjct: 371 tccaaagctgtgcaacctttgcagcattctcatgcatcatggaggggctcaacaaacagc 430

             
Query: 329 ag 330
           ||
Sbjct: 431 ag 432



 Score =  117 bits (59), Expect = 5e-23
 Identities = 95/107 (88%)
 Strand = Plus / Plus

                                                                       
Query: 16  gacttcgccggcggcgccttcgtcggatctatctttggatatggacaaggtttgctaact 75
           ||||||||||| ||||||||| ||||||||||| | |||||||||||||||||| | |||
Sbjct: 145 gacttcgccggtggcgccttcatcggatctatcgtcggatatggacaaggtttgttcact 204

                                                          
Query: 76  aagaagggcttcaagggctcactcggcaatgcagggtcttctgccaa 122
           |||||||| || ||||||||| || |||  |||||||||||||||||
Sbjct: 205 aagaagggatttaagggctcattcagcaccgcagggtcttctgccaa 251



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 433 tcagatgctttctcttcgtgctgccaggcctt 464
           ||||||||||| ||||| ||||||||| ||||
Sbjct: 532 tcagatgctttatcttcatgctgccagccctt 563
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>dbj|AK069314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011A15, full
            insert sequence
          Length = 2282

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 162/201 (80%), Gaps = 3/201 (1%)
 Strand = Plus / Plus

                                                                        
Query: 50   ttggatatggacaaggtttgctaactaagaagggcttcaagggctcactcggcaatgcag 109
            |||||||||||||||||||| | ||||||| ||| || |||||||   || |||   |||
Sbjct: 1937 ttggatatggacaaggtttgttcactaagaggggatttaagggcttgttcagcacc-cag 1995

                                                                        
Query: 110  ggtcttctgccaaaagttttgcggttctatctggtgtccagagtttggttttgtgcttgt 169
            |||| ||||||||  ||||||| ||||| ||||| |||||  || | ||| ||||| |||
Sbjct: 1996 ggtcctctgccaa--gttttgcagttctctctggcgtccattgtctagttgtgtgcctgt 2053

                                                                        
Query: 170  tgaggaagctgcgtgggaaagatgatattatcaattccggcattgctggttgttgcacag 229
            |||| | ||||||||| |||||||| ||| | ||| | || || ||||||||||||||  
Sbjct: 2054 tgagaaggctgcgtggcaaagatgacattgttaatgctggaatagctggttgttgcacta 2113

                                 
Query: 230  gtcttgctttgagttttccag 250
            | |||||| |||| |||||||
Sbjct: 2114 gccttgctctgagctttccag 2134
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>gb|AY105087.1| Zea mays PCO115466 mRNA sequence
          Length = 698

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 178 ctgcgtgggaaagatgatattatcaattccggcattgctggttgttgcacaggtcttgct 237
           ||||||||||||||||| || |||||| | || || || ||||||||||||||  |||||
Sbjct: 342 ctgcgtgggaaagatgacatgatcaatgcgggtatggcaggttgttgcacaggcattgct 401

                          
Query: 238 ttgagttttccaggt 252
           ||||| |||||||||
Sbjct: 402 ttgagctttccaggt 416
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                           
Query: 126     ttttgcggttctatctggtgtccagagtttggttttgtgcttgttgaggaagctgcgtgg 185
               |||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||| ||
Sbjct: 4878756 ttttgcagttctctctggcgtccagagtctggttgtgtgcttgttgagaaggctgcgcgg 4878815

                        
Query: 186     gaaagatga 194
                ||||||||
Sbjct: 4878816 caaagatga 4878824



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                           
Query: 58      ggacaaggtttgctaactaagaagggcttcaagggctcactcggcaatgcagggtcttct 117
               |||||||||||| | ||||||||||| || ||||||||| || |||  ||||||||||||
Sbjct: 4878604 ggacaaggtttgttcactaagaagggatttaagggctcattcagcaccgcagggtcttct 4878663

                    
Query: 118     gccaa 122
               |||||
Sbjct: 4878664 gccaa 4878668



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                               
Query: 283     accttcgcagcattctcgtgcatcatggaggggttgaacaagcagcag 330
               ||||| ||||||||||| ||||||||||||||| | ||||| ||||||
Sbjct: 4880147 acctttgcagcattctcatgcatcatggaggggctcaacaaacagcag 4880194



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                       
Query: 214     gctggttgttgcacaggtcttgctttgagttttccaggta 253
               |||||||||||||| || ||||||||||| ||||||||||
Sbjct: 4878954 gctggttgttgcactggccttgctttgagctttccaggta 4878993



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 16      gacttcgccggcggcgccttcgtcggatctatctttggatatgg 59
               ||||||||||| ||||||||| ||||||||||| | ||||||||
Sbjct: 4878129 gacttcgccggtggcgccttcatcggatctatcgtcggatatgg 4878172



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 214     gctggttgttgcacaggtcttgctttgagttttccaggta 253
               ||||||||||||||  | ||||||||||| ||||||||||
Sbjct: 4454462 gctggttgttgcactagccttgctttgagctttccaggta 4454423



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 433     tcagatgctttctcttcgtgctgccaggcctt 464
               ||||||||||| ||||| ||||||||| ||||
Sbjct: 4880294 tcagatgctttatcttcatgctgccagccctt 4880325
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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 58     ggacaaggtttgctaactaagaagggcttcaagggctcactcggcaatgcagggtcttct 117
              |||||||||||| | ||||||||||| || ||||||||| || |||  ||||||||||||
Sbjct: 116943 ggacaaggtttgttcactaagaagggatttaagggctcattcagcaccgcagggtcttct 116884

                   
Query: 118    gccaa 122
              |||||
Sbjct: 116883 gccaa 116879



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                          
Query: 126    ttttgcggttctatctggtgtccagagtttggttttgtgcttgttgaggaagctgcgtgg 185
              |||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||| ||
Sbjct: 116791 ttttgcagttctctctggcgtccagagtctggttgtgtgcttgttgagaaggctgcgcgg 116732

                       
Query: 186    gaaagatga 194
               ||||||||
Sbjct: 116731 caaagatga 116723



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 16     gacttcgccggcggcgccttcgtcggatctatctttggatatgg 59
              ||||||||||| ||||||||| ||||||||||| | ||||||||
Sbjct: 117418 gacttcgccggtggcgccttcatcggatctatcgtcggatatgg 117375



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                      
Query: 214    gctggttgttgcacaggtcttgctttgagttttccaggta 253
              |||||||||||||| || ||||||||||| ||||||||||
Sbjct: 116593 gctggttgttgcactggccttgctttgagctttccaggta 116554



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 283    accttcgcagcattctcgtgcatcatggaggggttgaacaagcagcag 330
              ||||| ||||||||||| ||||||||||||||| | ||||| ||||||
Sbjct: 115400 acctttgcagcattctcatgcatcatggaggggctcaacaaacagcag 115353



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 433    tcagatgctttctcttcgtgctgccaggcctt 464
              ||||||||||| ||||| ||||||||| ||||
Sbjct: 115253 tcagatgctttatcttcatgctgccagccctt 115222
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                           
Query: 126     ttttgcggttctatctggtgtccagagtttggttttgtgcttgttgaggaagctgcgtgg 185
               |||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||| ||
Sbjct: 4877971 ttttgcagttctctctggcgtccagagtctggttgtgtgcttgttgagaaggctgcgcgg 4878030

                        
Query: 186     gaaagatga 194
                ||||||||
Sbjct: 4878031 caaagatga 4878039



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                           
Query: 58      ggacaaggtttgctaactaagaagggcttcaagggctcactcggcaatgcagggtcttct 117
               |||||||||||| | ||||||||||| || ||||||||| || |||  ||||||||||||
Sbjct: 4877819 ggacaaggtttgttcactaagaagggatttaagggctcattcagcaccgcagggtcttct 4877878

                    
Query: 118     gccaa 122
               |||||
Sbjct: 4877879 gccaa 4877883



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                               
Query: 283     accttcgcagcattctcgtgcatcatggaggggttgaacaagcagcag 330
               ||||| ||||||||||| ||||||||||||||| | ||||| ||||||
Sbjct: 4879362 acctttgcagcattctcatgcatcatggaggggctcaacaaacagcag 4879409



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                       
Query: 214     gctggttgttgcacaggtcttgctttgagttttccaggta 253
               |||||||||||||| || ||||||||||| ||||||||||
Sbjct: 4878169 gctggttgttgcactggccttgctttgagctttccaggta 4878208



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 16      gacttcgccggcggcgccttcgtcggatctatctttggatatgg 59
               ||||||||||| ||||||||| ||||||||||| | ||||||||
Sbjct: 4877344 gacttcgccggtggcgccttcatcggatctatcgtcggatatgg 4877387



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 214     gctggttgttgcacaggtcttgctttgagttttccaggta 253
               ||||||||||||||  | ||||||||||| ||||||||||
Sbjct: 4454577 gctggttgttgcactagccttgctttgagctttccaggta 4454538



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 433     tcagatgctttctcttcgtgctgccaggcctt 464
               ||||||||||| ||||| ||||||||| ||||
Sbjct: 4879509 tcagatgctttatcttcatgctgccagccctt 4879540
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>dbj|AK101966.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H08, full
           insert sequence
          Length = 997

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                       
Query: 181 cgtgggaaagatgatattatcaattccggcattgctggttgttgcacaggtcttgctttg 240
           ||||||||||||||| || ||||| | || ||||| || |||||||| || |||||  ||
Sbjct: 474 cgtgggaaagatgatgttctcaatgctggaattgcaggctgttgcactggccttgccctg 533

                                
Query: 241 agttttccaggtacaccacaa 261
           |||||||||||| ||||||||
Sbjct: 534 agttttccaggtgcaccacaa 554
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>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete
             sequence
          Length = 154696

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 214   gctggttgttgcacaggtcttgctttgagttttccaggta 253
             ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 27878 gctggttgttgcacaggacttgctttgagctttccaggta 27917



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 282   caccttcgcagcattctcgtgcatcatgga 311
             ||||||||| |||||||| |||||||||||
Sbjct: 30726 caccttcgcggcattctcttgcatcatgga 30755



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 13    ggggacttcgccggcggcgccttcgtcgg 41
             |||||| |||||| |||||||||||||||
Sbjct: 26070 ggggacctcgccgccggcgccttcgtcgg 26098
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 214      gctggttgttgcacaggtcttgctttgagttttccaggta 253
                ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 10869768 gctggttgttgcacaggacttgctttgagctttccaggta 10869807



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 282      caccttcgcagcattctcgtgcatcatgga 311
                ||||||||| |||||||| |||||||||||
Sbjct: 10872616 caccttcgcggcattctcttgcatcatgga 10872645



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 13       ggggacttcgccggcggcgccttcgtcgg 41
                |||||| |||||| |||||||||||||||
Sbjct: 10867960 ggggacctcgccgccggcgccttcgtcgg 10867988
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 214      gctggttgttgcacaggtcttgctttgagttttccaggta 253
                ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 10875808 gctggttgttgcacaggacttgctttgagctttccaggta 10875847



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 282      caccttcgcagcattctcgtgcatcatgga 311
                ||||||||| |||||||| |||||||||||
Sbjct: 10878656 caccttcgcggcattctcttgcatcatgga 10878685



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 13       ggggacttcgccggcggcgccttcgtcgg 41
                |||||| |||||| |||||||||||||||
Sbjct: 10874000 ggggacctcgccgccggcgccttcgtcgg 10874028
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>dbj|AK109451.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E01, full
            insert sequence
          Length = 2482

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 214  gctggttgttgcacaggtcttgctttgagttttccaggta 253
            |||||||||| |||||| ||||||||||| ||||||||||
Sbjct: 1383 gctggttgttacacaggacttgctttgagctttccaggta 1422



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 13  ggggacttcgccggcggcgccttcgtcgg 41
           |||||| |||||| |||||||||||||||
Sbjct: 191 ggggacctcgccgccggcgccttcgtcgg 219
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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 214   gctggttgttgcacaggtcttgctttgagttttccaggta 253
             ||||||||||||||  | ||||||||||| ||||||||||
Sbjct: 59754 gctggttgttgcactagccttgctttgagctttccaggta 59715
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>gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, complete sequence
          Length = 192856

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 251   gtacaccacaagcgctgcttca 272
             ||||||||||||||||||||||
Sbjct: 41893 gtacaccacaagcgctgcttca 41872
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>gb|DQ083922.1| Cortinarius splendens voucher TF2001-122 RNA polymerase II second
           largest subunit (RPB2) gene, partial cds
          Length = 748

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 175 aagctgcgtgggaaagatgatatta 199
           ||||||||| |||||||||||||||
Sbjct: 195 aagctgcgtcggaaagatgatatta 219
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>gb|AF538972.1| Homo sapiens CARD15 gene, promoter region and 5' UTR, partial
            sequence
          Length = 3283

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 149  agagtttggttttgtgcttgt 169
            |||||||||||||||||||||
Sbjct: 1567 agagtttggttttgtgcttgt 1587
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>emb|AJ303140.1|HSA303140 Homo sapiens NOD2 gene for LRR-containing protein, exons 1-11
          Length = 163319

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   agagtttggttttgtgcttgt 169
             |||||||||||||||||||||
Sbjct: 94385 agagtttggttttgtgcttgt 94405
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>gb|AC007728.4|AC007728 Homo sapiens chromosome 16 clone RP11-327F22, complete sequence
          Length = 168271

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 149    agagtttggttttgtgcttgt 169
              |||||||||||||||||||||
Sbjct: 155573 agagtttggttttgtgcttgt 155553
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>gb|AC007608.7| Homo sapiens chromosome 16 clone RP11-401P9, complete sequence
          Length = 169773

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   agagtttggttttgtgcttgt 169
             |||||||||||||||||||||
Sbjct: 16282 agagtttggttttgtgcttgt 16262
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>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence
          Length = 205646

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   acaagggcggcgtcctccct 402
             ||||||||||||||||||||
Sbjct: 68910 acaagggcggcgtcctccct 68891
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>gb|DQ083923.1| Cortinarius splendificus voucher TF2002-041 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 737

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gaagctgcgtgggaaagatgatat 197
           |||||||||| |||||||||||||
Sbjct: 194 gaagctgcgtcggaaagatgatat 217
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>gb|DQ083917.1| Cortinarius quercus-ilicis voucher TSJ2003-050 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gaagctgcgtgggaaagatgatat 197
           |||||||||| |||||||||||||
Sbjct: 194 gaagctgcgtcggaaagatgatat 217
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>gb|DQ083916.1| Cortinarius quercus-ilicis voucher TSJ2002-075 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gaagctgcgtgggaaagatgatat 197
           |||||||||| |||||||||||||
Sbjct: 194 gaagctgcgtcggaaagatgatat 217
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>gb|DQ083878.1| Cortinarius alcalinophilus voucher TSJ2003-097 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 737

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gaagctgcgtgggaaagatgatat 197
           |||||||||| |||||||||||||
Sbjct: 194 gaagctgcgtcggaaagatgatat 217
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>gb|DQ083877.1| Cortinarius alcalinophilus voucher TSJ2003-020 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 732

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gaagctgcgtgggaaagatgatat 197
           |||||||||| |||||||||||||
Sbjct: 189 gaagctgcgtcggaaagatgatat 212
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>gb|DQ083876.1| Cortinarius alcalinophilus voucher TF2001-086 RNA polymerase II
           second largest subunit (RPB2) gene, partial cds
          Length = 682

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gaagctgcgtgggaaagatgatat 197
           |||||||||| |||||||||||||
Sbjct: 194 gaagctgcgtcggaaagatgatat 217
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    gtcttgctttgagttttcca 249
              ||||||||||||||||||||
Sbjct: 296583 gtcttgctttgagttttcca 296564
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     acaggtcttgctttgagttt 245
               ||||||||||||||||||||
Sbjct: 1306945 acaggtcttgctttgagttt 1306964
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>ref|XM_868941.1| PREDICTED: Bos taurus similar to interleukin 28 receptor, alpha
           isoform 1 (LOC616826), mRNA
          Length = 1575

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 ttgttgcacaggtcttgctt 238
           ||||||||||||||||||||
Sbjct: 284 ttgttgcacaggtcttgctt 265
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>emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, complete sequence
          Length = 29688

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  atatgctcaggaaacctagc 537
            ||||||||||||||||||||
Sbjct: 4344 atatgctcaggaaacctagc 4325
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>gb|AC100154.9| Mus musculus chromosome 7, clone RP23-43N5, complete sequence
          Length = 181412

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   tccctcctttcactctcccc 417
             ||||||||||||||||||||
Sbjct: 62116 tccctcctttcactctcccc 62097
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>gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome 3, complete sequence
          Length = 213637

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 395    tcctccctcctttcactctccccc 418
              ||||||||||| ||||||||||||
Sbjct: 140301 tcctccctcctctcactctccccc 140278
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>gb|AC122169.24| Medicago truncatula clone mth2-9m5, complete sequence
          Length = 125652

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    gtaatgtaaattttgctttt 568
              ||||||||||||||||||||
Sbjct: 113054 gtaatgtaaattttgctttt 113073
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>gb|AC145372.7| Medicago truncatula clone mth2-5f4, complete sequence
          Length = 94647

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   tggtgtccagagtttggttt 160
             ||||||||||||||||||||
Sbjct: 71250 tggtgtccagagtttggttt 71231
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>gb|AC162878.2| Mus musculus chromosome 7, clone RP24-316O13, complete sequence
          Length = 198612

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   tccctcctttcactctcccc 417
             ||||||||||||||||||||
Sbjct: 99861 tccctcctttcactctcccc 99842
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>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence
          Length = 200979

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   ttgaggaagctgcgtgggaa 188
             ||||||||||||||||||||
Sbjct: 70949 ttgaggaagctgcgtgggaa 70930
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>emb|BX470262.7| Zebrafish DNA sequence from clone CH211-120K20 in linkage group 14,
              complete sequence
          Length = 164673

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 558    attttgcttttggataatgt 577
              ||||||||||||||||||||
Sbjct: 128664 attttgcttttggataatgt 128645
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>gb|AC011131.6| Homo sapiens chromosome 8, clone RP11-351E7, complete sequence
          Length = 178705

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    agtttggttttgtgcttgtt 170
              ||||||||||||||||||||
Sbjct: 139498 agtttggttttgtgcttgtt 139517
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>gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, complete sequence
          Length = 204340

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    aagctgcgtgggaaagatga 194
              ||||||||||||||||||||
Sbjct: 181693 aagctgcgtgggaaagatga 181674
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>gb|AC150889.3| Medicago truncatula chromosome 7 BAC clone mte1-61j12, complete sequence
          Length = 116517

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 549    gtaatgtaaattttgctttt 568
              ||||||||||||||||||||
Sbjct: 107021 gtaatgtaaattttgctttt 107002
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>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 383  acaagggcggcgtcctccct 402
            ||||||||||||||||||||
Sbjct: 8008 acaagggcggcgtcctccct 7989
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>emb|AL772302.20| Mouse DNA sequence from clone RP23-450F9 on chromosome 4, complete
             sequence
          Length = 202175

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   gcactagacagcatcattag 502
             ||||||||||||||||||||
Sbjct: 70670 gcactagacagcatcattag 70651
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>gb|AC090181.9| Homo sapiens chromosome 15, clone RP11-797A18, complete sequence
          Length = 157793

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 396   cctccctcctttcactctcccccc 419
             ||||||||||||| ||||||||||
Sbjct: 94682 cctccctcctttctctctcccccc 94659
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    agaccgcgatggcgcacacc 348
              ||||||||||||||||||||
Sbjct: 162560 agaccgcgatggcgcacacc 162579
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>emb|AJ131740.1|CLA131740 Cuphea lanceolata FatB3 gene
          Length = 4096

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 taaattttgcttttggataa 574
           ||||||||||||||||||||
Sbjct: 930 taaattttgcttttggataa 949
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>gb|AC136188.2| Homo sapiens 12 BAC RP11-633L8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70901

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 579   gaaaacctagattgtttgcttttt 602
             |||| |||||||||||||||||||
Sbjct: 17906 gaaagcctagattgtttgcttttt 17883
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>gb|AC007628.3|AC007628 Genomic sequence of Homo sapiens clone N0576M10 from chromosome 18,
             complete sequence
          Length = 140356

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   ttgaggaagctgcgtgggaa 188
             ||||||||||||||||||||
Sbjct: 65677 ttgaggaagctgcgtgggaa 65658
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>gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, complete sequence
          Length = 209515

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    gtttggttttgtgcttgttg 171
              ||||||||||||||||||||
Sbjct: 124098 gtttggttttgtgcttgttg 124117
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>gb|AC138302.3| Mus musculus BAC clone RP24-554C14 from 3, complete sequence
          Length = 152548

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 395   tcctccctcctttcactctccccc 418
             ||||||||||| ||||||||||||
Sbjct: 79900 tcctccctcctctcactctccccc 79923
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>gb|AC145911.4| Gallus gallus BAC clone CH261-47H12 from chromosome unknown, complete
              sequence
          Length = 210020

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 583    acctagattgtttgcttttt 602
              ||||||||||||||||||||
Sbjct: 133719 acctagattgtttgcttttt 133700


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,307,820
Number of Sequences: 3902068
Number of extensions: 5307820
Number of successful extensions: 101238
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100875
Number of HSP's gapped (non-prelim): 360
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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