ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags35f11 |
|---|---|
| Clone Library Name | barley_pub |
>PEAM3_ARATH (Q9C6B9) Putative phosphoethanolamine N-methyltransferase 3 (EC| 2.1.1.103) Length = 490 Score = 33.9 bits (76), Expect = 0.36 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Frame = +3 Query: 198 KRSRVILDVGCGVASFGGYM---FDRDVLTMSFAPKDEHEAQVQFALERGIPAISA---- 356 K + +LDVGCG+ YM FD DV+ + + + FALE I + Sbjct: 280 KPGQKVLDVGCGIGGGDFYMAENFDVDVVGIDLSVN-----MISFALEHAIGLKCSVEFE 334 Query: 357 VMGTKRLPYPSRVFDVIH 410 V + YP FDVI+ Sbjct: 335 VADCTKKEYPDNTFDVIY 352
>PEAMT_SPIOL (Q9M571) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103)| Length = 494 Score = 33.1 bits (74), Expect = 0.62 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Frame = +3 Query: 198 KRSRVILDVGCGVASFGGYM---FDRDVLTMSFAPKDEHEAQVQFALERGIPAISA---- 356 K + +LDVGCG+ YM +D +V+ + + + FALER I A Sbjct: 284 KPGQKVLDVGCGIGGGDFYMAENYDVEVVGIDLSIN-----MISFALERSIGLKCAVEFE 338 Query: 357 VMGTKRLPYPSRVFDVIH 410 V + YP FDVI+ Sbjct: 339 VADCTKKDYPENSFDVIY 356
>PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)| (PEAMT 1) (AtNMT1) Length = 491 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Frame = +3 Query: 198 KRSRVILDVGCGVASFGGYMFDR-DVLTMSFAPKDEHEAQVQFALERGIPAISAV----- 359 K + +LDVGCG+ YM ++ DV + D + FALER I +V Sbjct: 281 KPGQKVLDVGCGIGGGDFYMAEKFDVHVVGI---DLSVNMISFALERAIGLSCSVEFEVA 337 Query: 360 -MGTKRLPYPSRVFDVIH 410 TK YP FDVI+ Sbjct: 338 DCTTKH--YPDNSFDVIY 353
>ACT6_SOLTU (P30168) Actin-71| Length = 377 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D E V+ E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYMVKILTE 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>PEAM2_ARATH (Q944H0) Putative phosphoethanolamine N-methyltransferase 2 (EC| 2.1.1.103) Length = 475 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Frame = +3 Query: 198 KRSRVILDVGCGVASFGGYM---FDRDVLTMSFAPKDEHEAQVQFALERGIPAISA---- 356 K + +LDVGCG+ YM FD V+ + + + FALER I + Sbjct: 265 KPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVN-----MISFALERAIGLKCSVEFE 319 Query: 357 VMGTKRLPYPSRVFDVIH 410 V YP FDVI+ Sbjct: 320 VADCTTKTYPDNSFDVIY 337
>ACT1_PEA (P30164) Actin-1| Length = 376 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D E+ ++ E Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTESLMKILTE 196 Query: 333 RG 338 RG Sbjct: 197 RG 198
>ACT_GOSHI (O81221) Actin| Length = 377 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D +A ++ E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>ACT1_ARATH (P10671) Actin-1/3| Length = 377 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D +A ++ E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>ACT2_SOLTU (P93586) Actin-46 (Fragment)| Length = 336 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A D E V+ E Sbjct: 118 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGADLTEYMVKILTE 177 Query: 333 RG 338 RG Sbjct: 178 RG 179
>ACT_PUCGR (P50138) Actin| Length = 375 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Frame = +3 Query: 138 NGALHYIDTIQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEH 305 N Y+ IQ L A G+ + ++LD G GV + GY +L + A +D Sbjct: 128 NAPAFYV-AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186 Query: 306 EAQVQFALERG 338 + ++ +ERG Sbjct: 187 DYLIKILMERG 197
>ACTC_BRALA (O17503) Actin, cytoplasmic| Length = 375 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D+ + ++ E Sbjct: 136 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDQTDYLMKILTE 195 Query: 333 RG 338 RG Sbjct: 196 RG 197
>ACT1_SCHCO (Q9Y702) Actin-1 (Beta-actin)| Length = 375 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = +3 Query: 138 NGALHYIDTIQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEH 305 N Y+ IQ L A G+ + ++LD G GV + G+ +L + A +D Sbjct: 128 NAPAFYV-AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFALPHAILRLDLAGRDLT 186 Query: 306 EAQVQFALERGIP 344 + ++ +ERG P Sbjct: 187 DFLIKNLMERGYP 199
>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated| protein 10.2) (High sulfur keratin-associated protein 10.2) (Keratin-associated protein 18-2) (Keratin-associated protein 18.2) Length = 255 Score = 29.6 bits (65), Expect = 6.8 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -2 Query: 48 CEERCCTIPCXLPSC 4 C E CC +PC PSC Sbjct: 22 CPESCCELPCGTPSC 36
>PAL1_RUBID (Q9M568) Phenylalanine ammonia-lyase 1 (EC 4.3.1.5) (RiPAL1)| Length = 710 Score = 29.6 bits (65), Expect = 6.8 Identities = 21/54 (38%), Positives = 26/54 (48%) Frame = +1 Query: 391 GFLMSFTVLAAESLGTLKVASFCWN*TDYYVLVVTSSGLPLLFTKSSLKMLKFG 552 G M T LA S+G L A F DYY ++GLP + T SS L +G Sbjct: 400 GVAMDNTRLAIASIGKLIFAQFSELVNDYY-----NNGLPSILTGSSNPSLDYG 448
>ACT2_ECHGR (Q03341) Actin-2| Length = 376 Score = 29.6 bits (65), Expect = 6.8 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + V+LD G GV + GY +L + A +D + V+ E Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDHLVKIMTE 196 Query: 333 RG 338 RG Sbjct: 197 RG 198
>CINA_LACPL (Q88UZ3) CinA-like protein| Length = 420 Score = 29.6 bits (65), Expect = 6.8 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 12/66 (18%) Frame = +3 Query: 90 VSGDHLLFPGGGTQFKNGALHYIDTIQQALPD------------IAWGKRSRVILDVGCG 233 VSG +FPGG + N A H + + QA+ D +A G + ++ DVG Sbjct: 294 VSGVSAIFPGGFVTYANEAKHQLVNVPQAIIDAEGVVSEATAKAMASGAKQQLNTDVGIS 353 Query: 234 VASFGG 251 G Sbjct: 354 FTGVAG 359
>ACT7_ARATH (P53492) Actin-7 (Actin-2)| Length = 377 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D ++ ++ E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>ACT2_ORYSA (P17298) Actin-2| Length = 377 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D ++ ++ E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>ACT11_SOLTU (P30171) Actin-97| Length = 377 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D ++ ++ E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>ACT1_NAEGR (Q9NJV4) Actin-1| Length = 374 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D + ++ +E Sbjct: 135 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILME 194 Query: 333 RG 338 RG Sbjct: 195 RG 196
>ACT1_NAEFO (P27131) Actin-1 (Actin I)| Length = 375 Score = 29.6 bits (65), Expect = 6.8 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV+ + GY +L + A +D + ++ +E Sbjct: 136 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILME 195 Query: 333 RG 338 RG Sbjct: 196 RG 197
>KRA95_HUMAN (Q9BYQ1) Keratin-associated protein 9-5 (Keratin-associated protein| 9.5) (Ultrahigh sulfur keratin-associated protein 9.5) (Fragment) Length = 111 Score = 29.3 bits (64), Expect = 8.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 69 PCTLQAWCEERCCTIPCXLPSC 4 PC A CE CC C P+C Sbjct: 80 PCCRPACCETTCCRTTCFQPTC 101
>HEM1_AGRRD (P26505) 5-aminolevulinate synthase (EC 2.3.1.37) (5-aminolevulinic| acid synthase) (Delta-aminolevulinate synthase) (Delta-ALA synthetase) Length = 405 Score = 29.3 bits (64), Expect = 8.9 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = +3 Query: 3 GTRAGXKVWYSNVPHTKLAEYKGHQNWVKVSGDHLLFPGGGTQFKNGALHYIDTIQQALP 182 G R VW SN + + + +K + DH GGT+ +G HY ++Q L Sbjct: 43 GQRKDVTVWCSN-DYLGMGQNPKVIEAMKAAIDHCGAGAGGTRNISGTNHYHVLLEQELA 101 Query: 183 DIAWGKRSRVILDVG 227 D+ GK S +I G Sbjct: 102 DL-HGKESALIFTSG 115
>ACT2_PEA (P30165) Actin-2| Length = 376 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++L+ G GV+ + GY +L + A +D E+ ++ E Sbjct: 137 IQAVLSLYASGRTTGIVLESGDGVSHTVPIYEGYALPHAILRLDLAGRDLTESLMKILTE 196 Query: 333 RG 338 RG Sbjct: 197 RG 198
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 29.3 bits (64), Expect = 8.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 69 PCTLQAWCEERCCTIPCXLPSC 4 PC A CE CC C P+C Sbjct: 143 PCCRPACCETTCCRTTCFQPTC 164
>ACT5_ARATH (Q8RYC2) Putative actin-5| Length = 378 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L + G+ + ++LD G GV+ + GY +L + A +D E + +E Sbjct: 139 IQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMME 198 Query: 333 RG 338 RG Sbjct: 199 RG 200
>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein| 9.9) (Ultrahigh sulfur keratin-associated protein 9.9) Length = 154 Score = 29.3 bits (64), Expect = 8.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 69 PCTLQAWCEERCCTIPCXLPSC 4 PC A CE CC C P+C Sbjct: 123 PCCRPACCETTCCRTTCFQPTC 144
>ACT_VOLCA (P20904) Actin| Length = 377 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV + GY +L + A +D + ++ +E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILME 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>ACT_CHLRE (P53498) Actin| Length = 377 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +3 Query: 165 IQQALPDIAWGKRSRVILDVGCGVAS----FGGYMFDRDVLTMSFAPKDEHEAQVQFALE 332 IQ L A G+ + ++LD G GV + GY +L + A +D + ++ +E Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILME 197 Query: 333 RG 338 RG Sbjct: 198 RG 199
>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein| 9.8) (Ultrahigh sulfur keratin-associated protein 9.8) Length = 159 Score = 29.3 bits (64), Expect = 8.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 69 PCTLQAWCEERCCTIPCXLPSC 4 PC A CE CC C P+C Sbjct: 128 PCCRPACCETTCCRTTCFQPTC 149
>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein| 9.3) (Ultrahigh sulfur keratin-associated protein 9.3) Length = 159 Score = 29.3 bits (64), Expect = 8.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -2 Query: 69 PCTLQAWCEERCCTIPCXLPSC 4 PC A CE CC C P+C Sbjct: 128 PCCRPACCETTCCRTTCFQPTC 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,227,563 Number of Sequences: 219361 Number of extensions: 1879904 Number of successful extensions: 5099 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5093 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
