>YJ23_SCHPO (Q9USJ3) Hypothetical protein C4B3.03c in chromosome III precursor|
          Length = 679

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
 Frame = +1

Query: 97  ILQRSGTDSEKAQAATILPVVQK-QHQLLVTLLLCNAVAMEALPIFLDRIFHPXX-XXXX 270
           +L++SG  SE+  A  +L ++++ +H +LVTLLL N +  E LPI  D I          
Sbjct: 96  VLEQSGDASERVHARKVLKLLRRGKHWVLVTLLLGNVIVNETLPIVFDSIIGGGWPAVLI 155

Query: 271 XXXXXXXXGEVIPQAICTRYGLAVGANFVWLVRILMXMCYPIAYP 405
                   GEVIPQA C RYGL++GA    +V  +M + +PIAYP
Sbjct: 156 STAMIVIFGEVIPQATCVRYGLSIGAKLEPIVLFMMYLLWPIAYP 200

>SCML2_HUMAN (Q9UQR0) Sex comb on midleg-like protein 2|
          Length = 700

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
 Frame = -1

Query: 356 TKLAPTAN-PYLVQIACGITSPKARTNVTDKTTATTG*KILSR--NIGRASMATALHSSR 186
           TK +P    PY+V ++  +  PK +   ++      G   + +  N+   S +++L+S  
Sbjct: 496 TKRSPQQTVPYVVPLSPKL--PKTKEYASEGEPLFAGGSAIPKEENLSEDSKSSSLNSGN 553

Query: 185 VTRSWCCF*TTGRIVAACAFSESVPLRWRISSSTRPSDMSPRVSPDMIPAKSTRKQEMPA 6
                C          +  FS SVP     +SS    D+SP+ SP  +  +  RK E P+
Sbjct: 554 YLNPACRNPMYIHTSVSQDFSRSVP---GTTSSPLVGDISPKSSPHEVKFQMQRKSEAPS 610

Query: 5   Y 3
           Y
Sbjct: 611 Y 611

>TX13A_CUPSA (P83919) Neurotoxic enhancer CSTX-13 A chain|
          Length = 34

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 240 DFSSCCRCRLVSDICSCFW 296
           D  SCCR ++  D+C+CF+
Sbjct: 13  DRHSCCRSKMFKDVCTCFY 31

>ABDA_SCHGR (P29556) Homeobox protein abdominal-A homolog (Fragment)|
          Length = 157

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = -2

Query: 298 LQKQEQMSLTRRQRQQDEKSCQGI*EEPPWQQHYTV 191
           L++Q+Q    ++Q+QQ ++  Q   ++PP QQH+T+
Sbjct: 93  LEQQQQQQQQQQQQQQQQQQQQAPPQQPP-QQHHTI 127

>SET2_CAEEL (Q18221) Protein set-2|
          Length = 1507

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 221  RASMATALHSSRVTRSWCCF*TTGRIVAACAFSESVPLRWRISSSTRPSDMSP 63
            +AS++T +HSS  +R+     T  R V+  + S S     R+S     SD +P
Sbjct: 868  KASVSTPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSARVSEDESDSDSTP 920

>MURI_YERPE (Q8ZAA2) Glutamate racemase (EC 5.1.1.3)|
          Length = 287

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 145 ILPVVQKQHQLLVTLLLCNAVAMEALPIFLDRIFHP 252
           I+  VQ++H L + ++ CN  +  +LP   +R   P
Sbjct: 79  IVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFP 114

>PARC_MYCGE (P47446) DNA topoisomerase 4 subunit A (EC 5.99.1.-) (Topoisomerase|
           IV subunit A)
          Length = 781

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 264 DSDNRMKNPVKEYRKSLHGNSITQ*QGDKKLVLLLNNWKDS 142
           D DN       E R SL+G  + +   DKKLV  +NN+ DS
Sbjct: 113 DGDNAAAMRYTETRLSLYGFELLK-DIDKKLVSFINNFDDS 152

>TR240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein complex 240 kDa|
            component (Trap240) (Thyroid hormone receptor-associated
            protein 1) (Vitamin D3 receptor-interacting protein
            complex component DRIP250) (DRIP 250)
            (Activator-recruited cofac
          Length = 2174

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 66   PEGEPRHDPGEEHQEAGDAG 7
            P G P H PG  +   GDAG
Sbjct: 2019 PTGSPVHSPGSHYPHGGDAG 2038

>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type|
           coiled-coil domain protein 1)
          Length = 970

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -1

Query: 236 SRNIGRASMATALHSS-RVTRSWCCF*TTGRIVAACAFSESVPLRWRISSSTRPSDMSPR 60
           S ++ RA     LH   RV R W     TGR+ A       V  RW++     P+D +PR
Sbjct: 723 SADLKRAQKDKGLHVEVRVNREWY----TGRVTAVEVGKHVV--RWKVKFDYVPTDTTPR 776

>OXAA_SHEON (Q8EKT6) Inner membrane protein oxaA|
          Length = 541

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 341 WVLTLYGLYVSSWXCAILLLTL 406
           W+L  Y  +V +W  AI+L+TL
Sbjct: 341 WLLMFYQSFVGNWGVAIILITL 362

>SCNNH_XENLA (O13263) Amiloride-sensitive sodium channel gamma-2-subunit|
           (Epithelial Na(+) channel gamma-2 subunit) (Gamma-2
           ENAC) (Nonvoltage-gated sodium channel 1 gamma-2
           subunit) (SCNEG2) (Gamma-2 NACH)
          Length = 663

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 335 WRW-VLTLYGLYVSSWXCAILLLT 403
           W W VLTL  + +  W CA+LL+T
Sbjct: 55  WIWIVLTLIAVALIFWQCALLLMT 78

>Y1621_ARCFU (O28652) Hypothetical UPF0324 membrane protein AF1621|
          Length = 328

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = +1

Query: 133 QAATILPVVQKQHQLLVTLLLCNAVAM------EAL-PIFLDRIF 246
           + A  LPV +K  Q+L+ LLLC A A        AL P+FL  +F
Sbjct: 9   EVARELPVSRKNLQMLLLLLLCGAAAYIINLADPALEPLFLALVF 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,906,416
Number of Sequences: 219361
Number of extensions: 867623
Number of successful extensions: 2636
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2633
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)