ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags34p01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK066212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058D20, full insert sequence Length = 1895 Score = 575 bits (290), Expect = e-161 Identities = 373/401 (93%) Strand = Plus / Plus Query: 1 gcgtacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 60 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 gcgtacgcggggatatcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 215 Query: 61 ctcgggctcatgtcgctcggcctcgtcgagctcgagatcctccagcgcagcggcaccgac 120 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 216 ctcggcctcatgtcgctcggcctcgtcgagctggagatcctccagcgcagcggcaccgat 275 Query: 121 tccgagaaggcgcaggctgctactatccttccagttgttcaaaagcagcaccagcttctt 180 |||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||| Sbjct: 276 gccgagaaggcccaggctgctgccatcctcccagttgttcaaaagcagcaccagcttctt 335 Query: 181 gtcaccctgctactgtgtaatgctgttgccatggaggctcttcctatattccttgacagg 240 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 336 gtcaccctgctcttgtgtaatgcttgtgccatggaggctcttcctatattccttgacagg 395 Query: 241 atttttcatcctgttgtcgctgtcgtcttgtcagtgacatttgttcttgcttttggagag 300 ||||||||||||||||| ||||| |||| ||||| || ||||||||||||||||||||| Sbjct: 396 atttttcatcctgttgttgctgttatcttatcagtaacgtttgttcttgcttttggagag 455 Query: 301 gttataccacaagcaatctgtactaggtatgggttggcggtgggtgctaactttgtatgg 360 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 456 gttataccacaagcaatctgtactaggtatggattggctgtgggtgctaactttgtatgg 515 Query: 361 cttgtacgtatcctcatggncatgtgctatcctattgctta 401 |||||||| ||||||||| ||| |||||||||||| |||| Sbjct: 516 cttgtacgcatcctcatgatcatctgctatcctatttctta 556
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 212 bits (107), Expect = 7e-52 Identities = 131/139 (94%) Strand = Plus / Plus Query: 1 gcgtacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 60 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101470 gcgtacgcggggatatcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 101529 Query: 61 ctcgggctcatgtcgctcggcctcgtcgagctcgagatcctccagcgcagcggcaccgac 120 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 101530 ctcggcctcatgtcgctcggcctcgtcgagctggagatcctccagcgcagcggcaccgat 101589 Query: 121 tccgagaaggcgcaggctg 139 |||||||||| ||||||| Sbjct: 101590 gccgagaaggcccaggctg 101608 Score = 151 bits (76), Expect = 2e-33 Identities = 96/103 (93%) Strand = Plus / Plus Query: 299 aggttataccacaagcaatctgtactaggtatgggttggcggtgggtgctaactttgtat 358 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 103771 aggttataccacaagcaatctgtactaggtatggattggctgtgggtgctaactttgtat 103830 Query: 359 ggcttgtacgtatcctcatggncatgtgctatcctattgctta 401 |||||||||| ||||||||| ||| |||||||||||| |||| Sbjct: 103831 ggcttgtacgcatcctcatgatcatctgctatcctatttctta 103873 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 215 aggctcttcctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| Sbjct: 103605 aggctcttcctatattccttgacaggatttttcatcctgttgttgctgttatcttatcag 103664 Query: 275 tgacatttgttcttgcttttggagaggt 302 | || ||||||||||||||||||||||| Sbjct: 103665 taacgtttgttcttgcttttggagaggt 103692 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 145 atccttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgct 204 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102559 atcctcccagttgttcaaaagcagcaccagcttcttgtcaccctgctcttgtgtaatgct 102618 Query: 205 gttgccatggagg 217 ||||||||||| Sbjct: 102619 tgtgccatggagg 102631
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 212 bits (107), Expect = 7e-52 Identities = 131/139 (94%) Strand = Plus / Plus Query: 1 gcgtacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 60 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10725 gcgtacgcggggatatcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 10784 Query: 61 ctcgggctcatgtcgctcggcctcgtcgagctcgagatcctccagcgcagcggcaccgac 120 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10785 ctcggcctcatgtcgctcggcctcgtcgagctggagatcctccagcgcagcggcaccgat 10844 Query: 121 tccgagaaggcgcaggctg 139 |||||||||| ||||||| Sbjct: 10845 gccgagaaggcccaggctg 10863 Score = 151 bits (76), Expect = 2e-33 Identities = 96/103 (93%) Strand = Plus / Plus Query: 299 aggttataccacaagcaatctgtactaggtatgggttggcggtgggtgctaactttgtat 358 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 13026 aggttataccacaagcaatctgtactaggtatggattggctgtgggtgctaactttgtat 13085 Query: 359 ggcttgtacgtatcctcatggncatgtgctatcctattgctta 401 |||||||||| ||||||||| ||| |||||||||||| |||| Sbjct: 13086 ggcttgtacgcatcctcatgatcatctgctatcctatttctta 13128 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 215 aggctcttcctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| Sbjct: 12860 aggctcttcctatattccttgacaggatttttcatcctgttgttgctgttatcttatcag 12919 Query: 275 tgacatttgttcttgcttttggagaggt 302 | || ||||||||||||||||||||||| Sbjct: 12920 taacgtttgttcttgcttttggagaggt 12947 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 145 atccttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgct 204 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 11814 atcctcccagttgttcaaaagcagcaccagcttcttgtcaccctgctcttgtgtaatgct 11873 Query: 205 gttgccatggagg 217 ||||||||||| Sbjct: 11874 tgtgccatggagg 11886
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 212 bits (107), Expect = 7e-52 Identities = 131/139 (94%) Strand = Plus / Plus Query: 1 gcgtacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 60 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19088827 gcgtacgcggggatatcctgcttcctggtgctcttcgccgggatcatgtcggggctcacc 19088886 Query: 61 ctcgggctcatgtcgctcggcctcgtcgagctcgagatcctccagcgcagcggcaccgac 120 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19088887 ctcggcctcatgtcgctcggcctcgtcgagctggagatcctccagcgcagcggcaccgat 19088946 Query: 121 tccgagaaggcgcaggctg 139 |||||||||| ||||||| Sbjct: 19088947 gccgagaaggcccaggctg 19088965 Score = 151 bits (76), Expect = 2e-33 Identities = 96/103 (93%) Strand = Plus / Plus Query: 299 aggttataccacaagcaatctgtactaggtatgggttggcggtgggtgctaactttgtat 358 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 19091128 aggttataccacaagcaatctgtactaggtatggattggctgtgggtgctaactttgtat 19091187 Query: 359 ggcttgtacgtatcctcatggncatgtgctatcctattgctta 401 |||||||||| ||||||||| ||| |||||||||||| |||| Sbjct: 19091188 ggcttgtacgcatcctcatgatcatctgctatcctatttctta 19091230 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 215 aggctcttcctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcag 274 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| Sbjct: 19090962 aggctcttcctatattccttgacaggatttttcatcctgttgttgctgttatcttatcag 19091021 Query: 275 tgacatttgttcttgcttttggagaggt 302 | || ||||||||||||||||||||||| Sbjct: 19091022 taacgtttgttcttgcttttggagaggt 19091049 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 145 atccttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgct 204 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 19089916 atcctcccagttgttcaaaagcagcaccagcttcttgtcaccctgctcttgtgtaatgct 19089975 Query: 205 gttgccatggagg 217 ||||||||||| Sbjct: 19089976 tgtgccatggagg 19089988
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 8590 ctggtgctcttcgcggggctcatgtcggggctcaccctggggctcatgtccctcagcctc 8649 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 8650 gtcgacctcgaggtcctc 8667
>ref|XM_469251.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1808 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 276 ctggtgctcttcgcggggctcatgtcggggctcaccctggggctcatgtccctcagcctc 335 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 336 gtcgacctcgaggtcctc 353 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 199 aatgctgttgccatggaggctcttcctatattccttga 236 ||||||| |||||||||||||| || ||||||||||| Sbjct: 450 aatgctgcagccatggaggctctgcccatattccttga 487
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 26360549 ctggtgctcttcgcggggctcatgtcggggctcaccctggggctcatgtccctcagcctc 26360608 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 26360609 gtcgacctcgaggtcctc 26360626 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 1456247 ctggtgatgttcgccgggctcatgtcggggctcaccctcggcctcatgtcgctcagcctc 1456306 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 1456307 gtcgacctcgaggtcctc 1456324
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete sequence Length = 134728 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 30091 ctggtgctcttcgcggggctcatgtcggggctcaccctggggctcatgtccctcagcctc 30032 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 30031 gtcgacctcgaggtcctc 30014
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117750 ctggtgatgttcgccgggctcatgtcggggctcaccctcggcctcatgtcgctcagcctc 117809 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 117810 gtcgacctcgaggtcctc 117827
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 26451858 ctggtgctcttcgcggggctcatgtcggggctcaccctggggctcatgtccctcagcctc 26451917 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 26451918 gtcgacctcgaggtcctc 26451935 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 1456245 ctggtgatgttcgccgggctcatgtcggggctcaccctcggcctcatgtcgctcagcctc 1456304 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 1456305 gtcgacctcgaggtcctc 1456322
>dbj|AK102496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095A20, full insert sequence Length = 2186 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 229 ctggtgatgttcgccgggctcatgtcggggctcaccctcggcctcatgtcgctcagcctc 288 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 289 gtcgacctcgaggtcctc 306
>dbj|AK100164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021E03, full insert sequence Length = 2185 Score = 99.6 bits (50), Expect = 7e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 25 ctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctc 84 |||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 227 ctggtgatgttcgccgggctcatgtcggggctcaccctcggcctcatgtcgctcagcctc 286 Query: 85 gtcgagctcgagatcctc 102 ||||| |||||| ||||| Sbjct: 287 gtcgacctcgaggtcctc 304
>gb|AY111105.1| Zea mays CL5949_-4 mRNA sequence Length = 641 Score = 79.8 bits (40), Expect = 6e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 147 ccttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgt 206 ||||||||||||||||||||| |||||||||| ||||||||| | ||||||||| || Sbjct: 546 ccttccagttgttcaaaagcaacaccagcttcatgtcaccctattgttgtgtaatgttgc 487 Query: 207 tgccatggaggc 218 |||||||||||| Sbjct: 486 tgccatggaggc 475 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 64 gggctcatgtcgctcggcctcgtcgagctcgagatcctc 102 |||||||||| |||||||||||||||||| ||||||||| Sbjct: 370 gggctcatgttgctcggcctcgtcgagctggagatcctc 332
>gb|BT018896.1| Zea mays clone EL01T0207A04.d mRNA sequence Length = 2109 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 32 tcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcctcgtcgagc 91 |||||||||| |||||||||| ||||||||||| |||||||| ||| |||||||||| | Sbjct: 381 tcttcgccggcctcatgtcgggcctcaccctcggcctcatgtccctcagcctcgtcgacc 440 Query: 92 tcgag 96 ||||| Sbjct: 441 tcgag 445
>gb|AY106883.1| Zea mays PCO127756 mRNA sequence Length = 547 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 215 aggctcttcctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcag 274 |||| ||||||||||| ||||| ||||| ||||||| |||| | ||||| | ||||||| Sbjct: 468 aggcacttcctatatttcttgataggatgtttcatcatgttcttgctgtaatattgtcag 527 Query: 275 tgacatttgttcttgc 290 |||||||||||||||| Sbjct: 528 tgacatttgttcttgc 543 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/82 (86%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 23 tcctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggcc 82 |||| |||||| |||| ||||||| || |||||||| || |||||| ||||||||||| Sbjct: 350 tcctcgtgctcatcgcatggatcatatctgggctcacactggggctc--gtcgctcggcc 407 Query: 83 tcgtcgagctcgagatcctcca 104 |||||||||| ||||||||||| Sbjct: 408 tcgtcgagctagagatcctcca 429
>ref|NM_100209.2| Arabidopsis thaliana unknown protein AT1G03270 mRNA, complete cds Length = 1500 Score = 67.9 bits (34), Expect = 2e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 163 aagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttgccatggaggctctt 222 |||||||| || |||||||| || || || || || ||||| | ||| |||||||||||| Sbjct: 265 aagcagcatcaacttcttgtgactctacttctttgcaatgcagctgctatggaggctctt 324 Query: 223 cctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcagtgacattt 282 ||||||| ||| || | ||| || |||||| |||| ||||| | | ||||| || ||| Sbjct: 325 cctatatgcctggataagatattccatccttttgtggctgttttactctcagttactttt 384 Query: 283 gttcttgcttttggagag 300 |||||||||||||||||| Sbjct: 385 gttcttgcttttggagag 402 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 22 ttcctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggc 81 ||||| || ||||||||||| || |||||||| ||||| ||||| || ||||| || || Sbjct: 124 ttcctcgtactcttcgccggaataatgtcgggtctcacactcggactaatgtcccttggt 183 Query: 82 ctcgtcgagctcgagatcctcca 104 ||||| ||||||||||| ||||| Sbjct: 184 ctcgttgagctcgagattctcca 206
>emb|BX815050.1|CNS0AEMC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS29ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1719 Score = 67.9 bits (34), Expect = 2e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 163 aagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttgccatggaggctctt 222 |||||||| || |||||||| || || || || || ||||| | ||| |||||||||||| Sbjct: 318 aagcagcatcaacttcttgtgactctacttctttgcaatgcagctgctatggaggctctt 377 Query: 223 cctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcagtgacattt 282 ||||||| ||| || | ||| || |||||| |||| ||||| | | ||||| || ||| Sbjct: 378 cctatatgcctggataagatattccatccttttgtggctgttttactctcagttactttt 437 Query: 283 gttcttgcttttggagag 300 |||||||||||||||||| Sbjct: 438 gttcttgcttttggagag 455 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 22 ttcctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggc 81 ||||| || ||||||||||| || |||||||| ||||| ||||| || ||||| || || Sbjct: 177 ttcctcgtactcttcgccggaataatgtcgggtctcacactcggactaatgtcccttggt 236 Query: 82 ctcgtcgagctcgagatcctcca 104 ||||| ||||||||||| ||||| Sbjct: 237 ctcgttgagctcgagattctcca 259
>ref|NM_117500.3| Arabidopsis thaliana unknown protein AT4G14230 mRNA, complete cds Length = 1716 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 4 tacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcaccctc 63 |||||||| ||||| || ||||| || ||||||||||| || ||||| || ||||| | Sbjct: 199 tacgccggaatctcttgtttccttgttctcttcgccggaattatgtctggtctcacttta 258 Query: 64 gggctcatgtcgctcggcctcgtcgagctcgagatcctcca 104 ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 259 gggcttatgtctctcggtctcgttgagctcgagattctcca 299 Score = 48.1 bits (24), Expect = 0.022 Identities = 66/80 (82%) Strand = Plus / Plus Query: 293 ttggagaggttataccacaagcaatctgtactaggtatgggttggcggtgggtgctaact 352 ||||||||||||| || ||||| || |||||||| ||||| | || ||||| ||||| | Sbjct: 488 ttggagaggttattcctcaagctatatgtactagatatggactagcagtgggagctaatt 547 Query: 353 ttgtatggcttgtacgtatc 372 | || |||||||| |||||| Sbjct: 548 tggtctggcttgttcgtatc 567
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 4 tacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcaccctc 63 |||||||| ||||| || ||||| || ||||||||||| || ||||| || ||||| | Sbjct: 160914 tacgccggaatctcttgtttccttgttctcttcgccggaattatgtctggtctcacttta 160855 Query: 64 gggctcatgtcgctcggcctcgtcgagctcgagatcctcca 104 ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 160854 gggcttatgtctctcggtctcgttgagctcgagattctcca 160814 Score = 42.1 bits (21), Expect = 1.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 164824 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 164765 Query: 209 ccatggagg 217 | ||||||| Sbjct: 164764 ctatggagg 164756
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 4 tacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcaccctc 63 |||||||| ||||| || ||||| || ||||||||||| || ||||| || ||||| | Sbjct: 100462 tacgccggaatctcttgtttccttgttctcttcgccggaattatgtctggtctcacttta 100403 Query: 64 gggctcatgtcgctcggcctcgtcgagctcgagatcctcca 104 ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 100402 gggcttatgtctctcggtctcgttgagctcgagattctcca 100362 Score = 42.1 bits (21), Expect = 1.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 104372 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 104313 Query: 209 ccatggagg 217 | ||||||| Sbjct: 104312 ctatggagg 104304
>gb|BT023429.1| Arabidopsis thaliana At4g14230 gene, complete cds Length = 1573 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 4 tacgccggcatctcctgcttcctggtgctcttcgccgggatcatgtcggggctcaccctc 63 |||||||| ||||| || ||||| || ||||||||||| || ||||| || ||||| | Sbjct: 164 tacgccggaatctcttgtttccttgttctcttcgccggaattatgtctggtctcacttta 223 Query: 64 gggctcatgtcgctcggcctcgtcgagctcgagatcctcca 104 ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 224 gggcttatgtctctcggtctcgttgagctcgagattctcca 264 Score = 48.1 bits (24), Expect = 0.022 Identities = 66/80 (82%) Strand = Plus / Plus Query: 293 ttggagaggttataccacaagcaatctgtactaggtatgggttggcggtgggtgctaact 352 ||||||||||||| || ||||| || |||||||| ||||| | || ||||| ||||| | Sbjct: 453 ttggagaggttattcctcaagctatatgtactagatatggactagcagtgggagctaatt 512 Query: 353 ttgtatggcttgtacgtatc 372 | || |||||||| |||||| Sbjct: 513 tggtctggcttgttcgtatc 532
>gb|AC005278.2|F15K9 Arabidopsis thaliana chromosome 1 BAC F15K9 sequence, complete sequence Length = 71097 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 22 ttcctggtgctcttcgccgggatcatgtcggggctcaccctcgggctcatgtcgctcggc 81 ||||| || ||||||||||| || |||||||| ||||| ||||| || ||||| || || Sbjct: 37082 ttcctcgtactcttcgccggaataatgtcgggtctcacactcggactaatgtcccttggt 37023 Query: 82 ctcgtcgagctcgagatcctcca 104 ||||| ||||||||||| ||||| Sbjct: 37022 ctcgttgagctcgagattctcca 37000 Score = 56.0 bits (28), Expect = 9e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 215 aggctcttcctatattccttgacaggatttttcatcctgttgtcgctgtcgtcttgtcag 274 ||||||||||||||| ||| || | ||| || |||||| |||| ||||| | | |||| Sbjct: 36571 aggctcttcctatatgcctggataagatattccatccttttgtggctgttttactctcag 36512 Query: 275 tgacatttgttcttgcttttggagaggt 302 | || ||||||||||||||||||||||| Sbjct: 36511 ttacttttgttcttgcttttggagaggt 36484
>ref|NM_117501.2| Arabidopsis thaliana unknown protein AT4G14240 transcript variant AT4G14240.1 mRNA, complete cds Length = 1914 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 321 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 380 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 381 ctatggaggggcttcctatat 401 Score = 42.1 bits (21), Expect = 1.4 Identities = 72/89 (80%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| |||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 449 acattcgttcttgcttacggtgaggttattcctcaagcgatatgcactaggtatggactc 508 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 509 gcggttggagcgaattttgtctggcttgt 537
>ref|NM_001036556.1| Arabidopsis thaliana unknown protein AT4G14240 transcript variant AT4G14240.2 mRNA, complete cds Length = 1895 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 302 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 361 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 362 ctatggaggggcttcctatat 382 Score = 42.1 bits (21), Expect = 1.4 Identities = 72/89 (80%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| |||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 430 acattcgttcttgcttacggtgaggttattcctcaagcgatatgcactaggtatggactc 489 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 490 gcggttggagcgaattttgtctggcttgt 518
>gb|BT015402.1| Arabidopsis thaliana At4g14240 gene, complete cds Length = 1458 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 230 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 289 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 290 ctatggaggggcttcctatat 310 Score = 42.1 bits (21), Expect = 1.4 Identities = 72/89 (80%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| |||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 358 acattcgttcttgcttacggtgaggttattcctcaagcgatatgcactaggtatggactc 417 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 418 gcggttggagcgaattttgtctggcttgt 446
>emb|BX828497.1|CNS0A3TI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1874 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| ||||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 449 acattcgttcttgctttcggtgaggttattcctcaagcgatatgcactaggtatggactc 508 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 509 gcggttggagcgaattttgtctggcttgt 537 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 321 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 380 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 381 ctatggaggggcttcctatat 401
>dbj|AK176768.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-31-I24 Length = 1992 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| ||||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 520 acattcgttcttgctttcggtgaggttattcctcaagcgatatgcactaggtatggactc 579 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 580 gcggttggagcgaattttgtctggcttgt 608 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 392 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 451 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 452 ctatggaggggcttcctatat 472
>dbj|AK176131.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-94-C19 Length = 1902 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| ||||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 430 acattcgttcttgctttcggtgaggttattcctcaagcgatatgcactaggtatggactc 489 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 490 gcggttggagcgaattttgtctggcttgt 518 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 302 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 361 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 362 ctatggaggggcttcctatat 382
>dbj|AK175756.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-31-J09 Length = 1902 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| ||||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 430 acattcgttcttgctttcggtgaggttattcctcaagcgatatgcactaggtatggactc 489 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 490 gcggttggagcgaattttgtctggcttgt 518 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 302 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 361 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 362 ctatggaggggcttcctatat 382
>dbj|AK175696.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-22-L04 Length = 1902 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 277 acatttgttcttgcttttggagaggttataccacaagcaatctgtactaggtatgggttg 336 ||||| ||||||||||| || |||||||| || ||||| || || ||||||||||| | Sbjct: 430 acattcgttcttgctttcggtgaggttattcctcaagcgatatgcactaggtatggactc 489 Query: 337 gcggtgggtgctaactttgtatggcttgt 365 ||||| || || || ||||| |||||||| Sbjct: 490 gcggttggagcgaattttgtctggcttgt 518 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 149 ttccagttgttcaaaagcagcaccagcttcttgtcaccctgctactgtgtaatgctgttg 208 |||| |||||||| || ||||| |||||| | || || ||||| |||||||||||| | | Sbjct: 302 ttccggttgttcagaaacagcatcagcttttagtgacactgcttctgtgtaatgctatgg 361 Query: 209 ccatggaggctcttcctatat 229 | ||||||| |||||||||| Sbjct: 362 ctatggaggggcttcctatat 382
>ref|NM_127015.3| Arabidopsis thaliana unknown protein AT2G14520 mRNA, complete cds Length = 1441 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 196 tgtaatgctgttgccatggaggctcttcctatattccttga 236 |||||||| | ||| |||||||| ||||||||||| ||||| Sbjct: 235 tgtaatgcagctgctatggaggcgcttcctatatttcttga 275
>ref|XM_362160.1| Magnaporthe grisea 70-15 hypothetical protein (MG04605.4) partial cds Length = 1620 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 aaggcgcaggctgctactatccttc 151 ||||||||||||||| ||||||||| Sbjct: 442 aaggcgcaggctgctgctatccttc 466
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 tccagcgcagcggcaccgactccga 125 |||||||||||||||||||| |||| Sbjct: 536115 tccagcgcagcggcaccgacgccga 536091
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cgctcggcctcgtcgagctcg 94 ||||||||||||||||||||| Sbjct: 6558984 cgctcggcctcgtcgagctcg 6559004
>emb|AJ628018.2| Streptomyces sp. SCC 2136 deoxysugar biosynthetic gene cluster Length = 77550 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cgctcggcctcgtcgagctcg 94 ||||||||||||||||||||| Sbjct: 32237 cgctcggcctcgtcgagctcg 32257
>gb|U41538.1| Caenorhabditis elegans cosmid R04E5, complete sequence Length = 33062 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 taggtatgggttggcggtgggtgctaac 351 ||||||||| ||||| |||||||||||| Sbjct: 20873 taggtatggattggcagtgggtgctaac 20900
>ref|XM_883335.1| PREDICTED: Bos taurus hypothetical protein LOC618277 (LOC618277), partial mRNA Length = 823 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcctggtgctcttcgccg 40 |||||||||||||||||||| Sbjct: 21 cttcctggtgctcttcgccg 40
>gb|AY309227.1| Uncultured bacterium clone MNM-NIFH-125 nitrogen fixing protein (nifH) gene, partial cds Length = 315 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tcgtcgagctcgagatcctc 102 |||||||||||||||||||| Sbjct: 107 tcgtcgagctcgagatcctc 88
>gb|AY309226.1| Uncultured bacterium clone MNM-NIFH-2 nitrogen fixing protein (nifH) gene, partial cds Length = 315 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tcgtcgagctcgagatcctc 102 |||||||||||||||||||| Sbjct: 107 tcgtcgagctcgagatcctc 88
>gb|AY309225.1| Uncultured bacterium clone WIM-NIFH-130 nitrogen fixing protein (nifH) gene, partial cds Length = 315 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tcgtcgagctcgagatcctc 102 |||||||||||||||||||| Sbjct: 107 tcgtcgagctcgagatcctc 88
>gb|AY309224.1| Uncultured bacterium clone WIM-NIFH-77 nitrogen fixing protein (nifH) gene, partial cds Length = 315 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tcgtcgagctcgagatcctc 102 |||||||||||||||||||| Sbjct: 107 tcgtcgagctcgagatcctc 88
>gb|AY309220.1| Uncultured bacterium clone MNM-NIFH-98 nitrogen fixing protein (nifH) gene, partial cds Length = 315 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 tcgtcgagctcgagatcctc 102 |||||||||||||||||||| Sbjct: 107 tcgtcgagctcgagatcctc 88
>gb|AC145955.3| Gallus gallus chromosome UNK clone CH261-13M13, complete sequence Length = 200102 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cttccagttgttcaaaagca 167 |||||||||||||||||||| Sbjct: 164964 cttccagttgttcaaaagca 164945
>gb|AC161939.4| Mus musculus 10 BAC RP24-364P6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162031 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 cttcctatattccttgacaggatt 243 ||||||||||| |||||||||||| Sbjct: 115204 cttcctatattacttgacaggatt 115181
>gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence Length = 167475 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 actatccttccagttgttca 161 |||||||||||||||||||| Sbjct: 33410 actatccttccagttgttca 33391
>gb|AF279141.1|AF279141 Rhodococcus sp. 19070 benzoate dioxygenase large subunit (bopX), benzoate dioxygenase small subunit (bopY), benzoate dioxygenase reductase (bopZ), cis-diol dehydrogenase (bopL), and benzoate transport protein (bopK) genes, complete cds Length = 6058 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 tcgagatcctccagcgcagcggcaccga 119 ||||||||||| ||||| |||||||||| Sbjct: 1712 tcgagatcctcgagcgccgcggcaccga 1739
>gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210970 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 cttcctatattccttgacaggatt 243 ||||||||||| |||||||||||| Sbjct: 39080 cttcctatattacttgacaggatt 39103
>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence Length = 161984 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 cggcaccgactccgagaaggcgcaggct 138 |||||||| ||||| ||||||||||||| Sbjct: 143242 cggcaccgtctccgggaaggcgcaggct 143269
>gb|AE004509.1| Pseudomonas aeruginosa PAO1, section 70 of 529 of the complete genome Length = 11717 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggcatctcctgcttcctggt 29 |||||||||||||||||||| Sbjct: 9590 ggcatctcctgcttcctggt 9571
>gb|AC010442.7| Homo sapiens chromosome 5 clone CTD-2228K2, complete sequence Length = 153197 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 cggcaccgactccgagaaggcgcaggct 138 |||||||| ||||| ||||||||||||| Sbjct: 19216 cggcaccgtctccgggaaggcgcaggct 19243
>dbj|AP000841.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-89J9, complete sequence Length = 103177 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tgccatggaggctcttccta 226 |||||||||||||||||||| Sbjct: 28416 tgccatggaggctcttccta 28435 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,171,965 Number of Sequences: 3902068 Number of extensions: 3171965 Number of successful extensions: 83956 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83640 Number of HSP's gapped (non-prelim): 313 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
