| Clone Name | bags35e03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 tactatgtcagtttcatcg 144 ||||||||||||||||||| Sbjct: 46049 tactatgtcagtttcatcg 46031
>emb|AL135912.7| Human DNA sequence from clone RP3-447N10 on chromosome 6 Contains a CpG island, complete sequence Length = 90577 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 154 tatttggttgtcttgtaat 172 ||||||||||||||||||| Sbjct: 28760 tatttggttgtcttgtaat 28742
>gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete sequence Length = 125894 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 atggtctttggtggaagct 29 ||||||||||||||||||| Sbjct: 41083 atggtctttggtggaagct 41101
>gb|AC021224.7|AC021224 Homo sapiens chromosome 18, clone RP11-158N19, complete sequence Length = 151794 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 atggtctttggtggaagct 29 ||||||||||||||||||| Sbjct: 65547 atggtctttggtggaagct 65529
>gb|AC153905.5| Mus musculus 6 BAC RP23-215A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215955 Score = 38.2 bits (19), Expect = 9.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 75 cagaaatgangcctccaaagct 96 ||||||||| |||||||||||| Sbjct: 79621 cagaaatgatgcctccaaagct 79642
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 tactatgtcagtttcatcg 144 ||||||||||||||||||| Sbjct: 9169394 tactatgtcagtttcatcg 9169376
>gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228174 Score = 38.2 bits (19), Expect = 9.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 75 cagaaatgangcctccaaagct 96 ||||||||| |||||||||||| Sbjct: 211422 cagaaatgatgcctccaaagct 211443
>gb|DQ299901.1| Solanum sogarandinum zinc finger B-box protein mRNA, complete cds Length = 1243 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 atatttggttgtcttgtaa 171 ||||||||||||||||||| Sbjct: 946 atatttggttgtcttgtaa 928
>emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chromosome 15, complete sequence Length = 170132 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 aaagcttcaagcgcctctt 109 ||||||||||||||||||| Sbjct: 153037 aaagcttcaagcgcctctt 153019 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,052,222 Number of Sequences: 3902068 Number of extensions: 1052222 Number of successful extensions: 61611 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61562 Number of HSP's gapped (non-prelim): 49 length of query: 194 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 172 effective length of database: 17,147,199,772 effective search space: 2949318360784 effective search space used: 2949318360784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)