ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags34o08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161718.1|AF161718 Triticum aestivum Sec61p (sec61) mRNA, complete cds Length = 1630 Score = 1021 bits (515), Expect = 0.0 Identities = 536/543 (98%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 45 ggctttcttgccggaagtgcagagtgctgacaggaaaataccatttagagaaaaagtgat 104 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105 ctacaccgtcatttctctcttcattttcctggtgtgcagtcagctcccgctctatggcat 164 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 ccattcaaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 224 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 284 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 285 tctagtgggatccaagattattgaagttgacaacagtgtgagagaggatcgtgctctgct 344 Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 gaatggtgcacagaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 404 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 405 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgccattctcatcat 464 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 524 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcat 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 525 ctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaatatcat 584 Query: 551 ctg 553 ||| Sbjct: 585 ctg 587
>dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G12, full insert sequence Length = 1970 Score = 773 bits (390), Expect = 0.0 Identities = 504/542 (92%) Strand = Plus / Plus Query: 12 gctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatc 71 |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gctttcctgcctgaagtacagagtgctgataggaaaataccatttagagaaaaagtgatc 252 Query: 72 tacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatc 131 ||||| || ||||| || ||||||||||| || ||||| ||||| || || ||||||||| Sbjct: 253 tacactgttatttccctattcattttcctggtatgcagccagctaccactgtatggcatc 312 Query: 132 cattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgt 191 ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 313 cattcaactactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgt 372 Query: 192 ggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaactt 251 |||||||| |||||||||||||| || ||||||||||||||||| ||||| ||||||||| Sbjct: 373 ggtactgttatggagctgggtatcactccaattgtgacatctggcatggtaatgcaactt 432 Query: 252 ctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctg 311 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 433 ctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctg 492 Query: 312 aatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgtt 371 ||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 493 aatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgtt 552 Query: 372 ctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcata 431 |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct: 553 ttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattata 612 Query: 432 cttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaaggc 491 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 613 cttcagcttttctttgctggcatcattgtcatctgtctggatgaacttctccagaaaggt 672 Query: 492 tatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcatc 551 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 673 tatggtttgggttctggcatttctctctttattgctaccaatatctgtgagaatatcatc 732 Query: 552 tg 553 || Sbjct: 733 tg 734
>dbj|AK100597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A15, full insert sequence Length = 2132 Score = 751 bits (379), Expect = 0.0 Identities = 502/543 (92%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 197 ggctttcttgccagaagtacagagcgctgataggaaaataccattcagagaaaaagtgat 256 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 ||| ||||| || ||||||||||||||||| |||||||||||||| || |||||||| || Sbjct: 257 ctataccgttatctctctcttcattttcctggtgtgcagtcagctaccactctatggaat 316 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 || || || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 317 tcactcaactactggagcagatcctttctactggatgcgtgttattcttgcttcaaaccg 376 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 377 tggtactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaact 436 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| || || Sbjct: 437 tctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgcacttct 496 Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 497 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 556 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 557 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 616 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 617 cctccagcttttctttgctggcatcattgtcatctgtcttgatgaacttctccagaaagg 676 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcat 550 |||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 677 ctatggtttgggttctggcatttcattgtttattgctaccaatatctgtgagaatatcat 736 Query: 551 ctg 553 ||| Sbjct: 737 ctg 739
>gb|BT016615.1| Zea mays clone Contig448 mRNA sequence Length = 1755 Score = 720 bits (363), Expect = 0.0 Identities = 498/543 (91%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| || |||||||| || |||||||| |||||||| ||||||||||| || Sbjct: 146 ggctttcttgccagaggtgcagagcgcggataggaagataccattcagagaaaaagttat 205 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 206 ctacactgttatttctctcttcatttttctggtgtgcagccagctcccactctatggcat 265 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 266 tcattcgacgactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 325 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||| ||||| |||||| |||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 326 tggcactgtgatggagttgggtattactccaattgtgacctctggtatggtaatgcaact 385 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 ||| || ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 386 tcttgtcggatcgaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 445 Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 ||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||| Sbjct: 446 gaatggtgcacaaaagttgcttggtatcttgatcgctattggggaagctgtggcatatgt 505 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||| ||||| |||||||||||||| || |||||||||||||| || Sbjct: 506 cctgtctggaatgtatggtagtgtaagccaacttggaacagggaatgctattctcattat 565 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 566 acttcagcttttctttgctggcatcattgtcatctgtttggatgaacttctccagaaagg 625 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcat 550 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 626 ttatggtttgggatctggtatttctctgttcattgctaccaatatctgtgagaatatcat 685 Query: 551 ctg 553 ||| Sbjct: 686 ctg 688
>gb|BT024137.1| Zea mays clone EL01N0446B05 mRNA sequence Length = 1756 Score = 720 bits (363), Expect = 0.0 Identities = 498/543 (91%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| || |||||||| || |||||||| |||||||| |||||||||| ||| Sbjct: 123 ggctttcttgccagaggtgcagagcgcggataggaagataccattcagagaaaaagggat 182 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 183 ctacactgttatttctctcttcatttttctggtgtgcagccagctcccactctatggcat 242 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 243 tcattcgacgactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 302 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||| ||||| |||||| |||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 303 tggcactgtgatggagttgggtattactccaattgtgacctctggtatggtaatgcaact 362 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 ||| || ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 363 tcttgtcggatcgaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 422 Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 ||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||| Sbjct: 423 gaatggtgcacaaaagttgcttggtatcttgatcgctattggggaagctgtggcatatgt 482 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||| ||||| |||||||||||||| || |||||||||||||| || Sbjct: 483 cctgtctggaatgtatggtagtgtaagccaacttggaacagggaatgctattctcattat 542 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 543 acttcagcttttctttgctggcatcattgtcatctgtttggatgaacttctccagaaagg 602 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcat 550 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 603 ttatggtttgggatctgggatttctctgttcattgctaccaatatctgtgagaatatcat 662 Query: 551 ctg 553 ||| Sbjct: 663 ctg 665
>gb|AY106354.1| Zea mays PCO109407 mRNA sequence Length = 1769 Score = 720 bits (363), Expect = 0.0 Identities = 498/543 (91%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| || |||||||| || |||||||| |||||||| ||||||||||| || Sbjct: 145 ggctttcttgccagaggtgcagagcgcggataggaagataccattcagagaaaaagttat 204 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 205 ctacactgttatttctctcttcatttttctggtgtgcagccagctcccactctatggcat 264 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 265 tcattcgacgactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 324 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||| ||||| |||||| |||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 325 tggcactgtgatggagttgggtattactccaattgtgacctctggtatggtaatgcaact 384 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 ||| || ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 385 tcttgtcggatcgaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 444 Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 ||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||| Sbjct: 445 gaatggtgcacaaaagttgcttggtatcttgatcgctattggggaagctgtggcatatgt 504 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||| ||||| |||||||||||||| || |||||||||||||| || Sbjct: 505 cctgtctggaatgtatggtagtgtaagccaacttggaacagggaatgctattctcattat 564 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 565 acttcagcttttctttgctggcatcattgtcatctgtttggatgaacttctccagaaagg 624 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcat 550 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 625 ttatggtttgggatctggtatttctctgttcattgctaccaatatctgtgagaatatcat 684 Query: 551 ctg 553 ||| Sbjct: 685 ctg 687
>dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E03, full insert sequence Length = 1621 Score = 702 bits (354), Expect = 0.0 Identities = 459/494 (92%) Strand = Plus / Plus Query: 60 gaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccg 119 ||||||||||||||||| || ||||| || ||||||||||| || ||||| ||||| || Sbjct: 1 gaaaaagtgatctacactgttatttccctattcattttcctggtatgcagccagctacca 60 Query: 120 ctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgttattctt 179 || |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 61 ctgtatggcatccattcaactactggagctgatcctttctactggatgcgtgttatcctt 120 Query: 180 gcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacatctggaatg 239 |||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| Sbjct: 121 gcatcaaaccgtggtactgttatggagctgggtatcactccaattgtgacatctggcatg 180 Query: 240 gttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgagagaggat 299 || |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 181 gtaatgcaacttctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggat 240 Query: 300 cgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgccattggggaagct 359 ||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 241 cgtgctctgctgaatggcgcacaaaagttacttggtatcctgattgcaattggggaagct 300 Query: 360 gtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgct 419 |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 301 gtggcatatgttttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgcc 360 Query: 420 attctcatcatacttcagcttttctttgctggcatcattgtcatctgtctagatgaactt 479 || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 361 atcctcattatacttcagcttttctttgctggcatcattgtcatctgtctggatgaactt 420 Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 421 ctccagaaaggttatggtttgggttctggcatttctctctttattgctaccaatatctgt 480 Query: 540 gagaacatcatctg 553 ||||| |||||||| Sbjct: 481 gagaatatcatctg 494
>gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds Length = 1864 Score = 682 bits (344), Expect = 0.0 Identities = 491/540 (90%) Strand = Plus / Plus Query: 14 tttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatcta 73 |||||| |||||||| |||||||||||||||| ||| ||||| ||||||||| | ||||| Sbjct: 169 tttcttaccggaagtacagagtgctgataggagaattccattcagagaaaaactcatcta 228 Query: 74 caccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatcca 133 ||| || ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 229 cactgttatttccctcttcattttcctagtgtgcagccagctcccgctctatggcatcca 288 Query: 134 ttcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtgg 193 ||| || ||||||||||| |||||||||||| |||||| |||||||||||| |||||||| Sbjct: 289 ttcaactactggagctgaccctttctactggttgcgtgctattcttgcatccaaccgtgg 348 Query: 194 tactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaacttct 253 |||| |||||||||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 349 atctgttatggagctgggtatcactccaattgtgacatctgggatggtgatgcaacttct 408 Query: 254 agtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaa 313 || ||||| ||||| |||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 409 ggtaggatcaaagatcattgaagttgacaacagtgtgagagaggatcgtgcacttctgaa 468 Query: 314 tggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgttct 373 |||||||||||||||||| |||||||| ||||| || || |||||||||||||||||| | Sbjct: 469 tggtgcacaaaagttgcttggtatcctcattgctatcggagaagctgtggcatatgtttt 528 Query: 374 gtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcatact 433 |||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 529 gtctggaatgtatggcagtgtgagccaactaggaacagggaatgctattctcattatact 588 Query: 434 tcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaaggcta 493 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 589 tcaacttttctttgctggcatcattgtcatctgtctggatgaacttctccagaaaggata 648 Query: 494 tggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcatctg 553 |||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 649 tggtttgggttctggcatttctctattcatcgctaccaacatctgtgagaatatcatctg 708
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 424 bits (214), Expect = e-115 Identities = 274/294 (93%) Strand = Plus / Minus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 ||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 10855631 ggctttcctgccagaagtacagagtgctgataggaaaataccattcagagaaaaagtgat 10855572 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 ||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct: 10855571 ctataccgttatctctctcttcattttcctggtgtgcagtcagctcccactctatggaat 10855512 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10855511 tcattcaactactggagcagatcctttctactggatgcgtgttattcttgcatcaaaccg 10855452 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10855451 tggcactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaact 10855392 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgc 304 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 10855391 tctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgc 10855338 Score = 408 bits (206), Expect = e-111 Identities = 272/294 (92%) Strand = Plus / Minus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 10865275 ggctttcttgccagaagtacagagcgctgataggaaaataccattcagagaaaaagtgat 10865216 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 ||| ||||| || ||||||||||||||||| |||||||||||||| || |||||||| || Sbjct: 10865215 ctataccgttatctctctcttcattttcctggtgtgcagtcagctaccactctatggaat 10865156 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 || || || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 10865155 tcactcaactactggagcagatcctttctactggatgcgtgttattcttgcttcaaaccg 10865096 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10865095 tggtactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaact 10865036 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgc 304 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 10865035 tctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgc 10864982 Score = 333 bits (168), Expect = 4e-88 Identities = 213/228 (93%) Strand = Plus / Minus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 10855161 gaatggcgcacaaaagctgctgggtatcttgattgctattggggaagctgtggcatatgt 10855102 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 10855101 gctgtctggaatgtatggtagtgtgagccaacttggaactggcaatgccattctcatcat 10855042 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 || || ||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 10855041 cctacaacttttctttgctggcatcattgttatctgccttgatgaacttctccagaaagg 10854982 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10854981 ctatggtttgggttctggcatttctctgttcattgctaccaatatctg 10854934 Score = 325 bits (164), Expect = 9e-86 Identities = 212/228 (92%) Strand = Plus / Minus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 10864798 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 10864739 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 10864738 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 10864679 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10864678 cctccagcttttctttgctggcatcattgtcatctgtcttgatgaacttctccagaaagg 10864619 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 |||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 10864618 ctatggtttgggttctggcatttcattgtttattgctaccaatatctg 10864571
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 424 bits (214), Expect = e-115 Identities = 274/294 (93%) Strand = Plus / Minus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 ||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 79354 ggctttcctgccagaagtacagagtgctgataggaaaataccattcagagaaaaagtgat 79295 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 ||| ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct: 79294 ctataccgttatctctctcttcattttcctggtgtgcagtcagctcccactctatggaat 79235 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 79234 tcattcaactactggagcagatcctttctactggatgcgtgttattcttgcatcaaaccg 79175 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79174 tggcactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaact 79115 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgc 304 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 79114 tctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgc 79061 Score = 408 bits (206), Expect = e-111 Identities = 272/294 (92%) Strand = Plus / Minus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 88998 ggctttcttgccagaagtacagagcgctgataggaaaataccattcagagaaaaagtgat 88939 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 ||| ||||| || ||||||||||||||||| |||||||||||||| || |||||||| || Sbjct: 88938 ctataccgttatctctctcttcattttcctggtgtgcagtcagctaccactctatggaat 88879 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 || || || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 88878 tcactcaactactggagcagatcctttctactggatgcgtgttattcttgcttcaaaccg 88819 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 88818 tggtactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaact 88759 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgc 304 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 88758 tctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgc 88705 Score = 333 bits (168), Expect = 4e-88 Identities = 213/228 (93%) Strand = Plus / Minus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 78884 gaatggcgcacaaaagctgctgggtatcttgattgctattggggaagctgtggcatatgt 78825 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 78824 gctgtctggaatgtatggtagtgtgagccaacttggaactggcaatgccattctcatcat 78765 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 || || ||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 78764 cctacaacttttctttgctggcatcattgttatctgccttgatgaacttctccagaaagg 78705 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 78704 ctatggtttgggttctggcatttctctgttcattgctaccaatatctg 78657 Score = 325 bits (164), Expect = 9e-86 Identities = 212/228 (92%) Strand = Plus / Minus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 88521 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 88462 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 88461 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 88402 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 88401 cctccagcttttctttgctggcatcattgtcatctgtcttgatgaacttctccagaaagg 88342 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 |||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 88341 ctatggtttgggttctggcatttcattgtttattgctaccaatatctg 88294
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 408 bits (206), Expect = e-111 Identities = 272/294 (92%) Strand = Plus / Minus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 4980 ggctttcttgccagaagtacagagcgctgataggaaaataccattcagagaaaaagtgat 4921 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 ||| ||||| || ||||||||||||||||| |||||||||||||| || |||||||| || Sbjct: 4920 ctataccgttatctctctcttcattttcctggtgtgcagtcagctaccactctatggaat 4861 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 || || || |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 4860 tcactcaactactggagcagatcctttctactggatgcgtgttattcttgcttcaaaccg 4801 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4800 tggtactgttatggagctgggtattaccccaattgtgacatctggaatggtaatgcaact 4741 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgc 304 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 4740 tctagtgggatcaaagattattgaagttgacaacagtgtgagagaggaccgtgc 4687 Score = 325 bits (164), Expect = 9e-86 Identities = 212/228 (92%) Strand = Plus / Minus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 4503 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 4444 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 4443 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 4384 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4383 cctccagcttttctttgctggcatcattgtcatctgtcttgatgaacttctccagaaagg 4324 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 |||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 4323 ctatggtttgggttctggcatttcattgtttattgctaccaatatctg 4276
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 406 bits (205), Expect = e-110 Identities = 277/301 (92%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5865443 ggctttcctgcctgaagtacagagtgctgataggaaaataccatttagagaaaaagtgat 5865502 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||| || ||||||||||| || ||||| ||||| || || |||||||| Sbjct: 5865503 ctacactgttatttccctattcattttcctggtatgcagccagctaccactgtatggcat 5865562 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5865563 ccattcaactactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 5865622 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 5865623 tggtactgttatggagctgggtatcactccaattgtgacatctggcatggtaatgcaact 5865682 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 5865683 tctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 5865742 Query: 311 g 311 | Sbjct: 5865743 g 5865743 Score = 349 bits (176), Expect = 6e-93 Identities = 215/228 (94%) Strand = Plus / Plus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 5865941 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 5866000 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 | |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 5866001 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 5866060 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5866061 acttcagcttttctttgctggcatcattgtcatctgtctggatgaacttctccagaaagg 5866120 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5866121 ttatggtttgggttctggcatttctctctttattgctaccaatatctg 5866168
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 406 bits (205), Expect = e-110 Identities = 277/301 (92%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 94273 ggctttcctgcctgaagtacagagtgctgataggaaaataccatttagagaaaaagtgat 94332 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||| || ||||||||||| || ||||| ||||| || || |||||||| Sbjct: 94333 ctacactgttatttccctattcattttcctggtatgcagccagctaccactgtatggcat 94392 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 94393 ccattcaactactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 94452 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 94453 tggtactgttatggagctgggtatcactccaattgtgacatctggcatggtaatgcaact 94512 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 94513 tctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 94572 Query: 311 g 311 | Sbjct: 94573 g 94573 Score = 349 bits (176), Expect = 6e-93 Identities = 215/228 (94%) Strand = Plus / Plus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 94771 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 94830 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 | |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 94831 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 94890 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 94891 acttcagcttttctttgctggcatcattgtcatctgtctggatgaacttctccagaaagg 94950 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94951 ttatggtttgggttctggcatttctctctttattgctaccaatatctg 94998
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 406 bits (205), Expect = e-110 Identities = 277/301 (92%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 15065 ggctttcctgcctgaagtacagagtgctgataggaaaataccatttagagaaaaagtgat 15124 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||| || ||||||||||| || ||||| ||||| || || |||||||| Sbjct: 15125 ctacactgttatttccctattcattttcctggtatgcagccagctaccactgtatggcat 15184 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 15185 ccattcaactactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 15244 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 15245 tggtactgttatggagctgggtatcactccaattgtgacatctggcatggtaatgcaact 15304 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 15305 tctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 15364 Query: 311 g 311 | Sbjct: 15365 g 15365 Score = 349 bits (176), Expect = 6e-93 Identities = 215/228 (94%) Strand = Plus / Plus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 15563 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 15622 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 | |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 15623 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 15682 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15683 acttcagcttttctttgctggcatcattgtcatctgtctggatgaacttctccagaaagg 15742 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 15743 ttatggtttgggttctggcatttctctctttattgctaccaatatctg 15790
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 406 bits (205), Expect = e-110 Identities = 277/301 (92%) Strand = Plus / Plus Query: 11 ggctttcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgat 70 ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5864656 ggctttcctgcctgaagtacagagtgctgataggaaaataccatttagagaaaaagtgat 5864715 Query: 71 ctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcat 130 |||||| || ||||| || ||||||||||| || ||||| ||||| || || |||||||| Sbjct: 5864716 ctacactgttatttccctattcattttcctggtatgcagccagctaccactgtatggcat 5864775 Query: 131 ccattcgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5864776 ccattcaactactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccg 5864835 Query: 191 tggtactgtcatggagctgggtattaccccaattgtgacatctggaatggttatgcaact 250 ||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 5864836 tggtactgttatggagctgggtatcactccaattgtgacatctggcatggtaatgcaact 5864895 Query: 251 tctagtgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgct 310 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 5864896 tctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgct 5864955 Query: 311 g 311 | Sbjct: 5864956 g 5864956 Score = 349 bits (176), Expect = 6e-93 Identities = 215/228 (94%) Strand = Plus / Plus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 5865154 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 5865213 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 | |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 5865214 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 5865273 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5865274 acttcagcttttctttgctggcatcattgtcatctgtctggatgaacttctccagaaagg 5865333 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 5865334 ttatggtttgggttctggcatttctctctttattgctaccaatatctg 5865381
>gb|AY093047.1| Arabidopsis thaliana putative protein transport protein SEC61 alpha subunit (At1g29310) mRNA, complete cds Length = 1686 Score = 321 bits (162), Expect = 1e-84 Identities = 429/518 (82%) Strand = Plus / Plus Query: 24 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 83 |||||||| |||||||| ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 152 gaagtgcaaagtgctgacaggaagattccatttagagagaaagtgatctacactgtcatc 211 Query: 84 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 143 || |||||||||||||| || || |||||||| || |||||||| |||||||| ||||| Sbjct: 212 tccctcttcattttccttgtttgtagtcagcttcctctctatgggatccattctaccacc 271 Query: 144 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 203 || |||||||| ||||| ||||||||||| ||||| ||||| || ||||| || || ||| Sbjct: 272 ggtgctgatccgttctattggatgcgtgtcattctcgcatcgaatcgtggaacggtgatg 331 Query: 204 gagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatcc 263 ||||| |||||||| || ||||| ||||||||| | || |||||||| ||| || || Sbjct: 332 gagcttggtattactcctattgtcacatctggattagtgatgcaactcttagcagggtca 391 Query: 264 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaa 323 ||||||||||| || ||||||| ||| | |||||||||||||| |||||||||| || Sbjct: 392 aagattattgaggttgacaacaatgttcgtgaggatcgtgctctcttgaatggtgctcag 451 Query: 324 aagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatg 383 ||| | || || || |||||||| ||||| || ||||| ||||||||||| || |||||| Sbjct: 452 aagcttcttgggattctgattgctattggtgaggctgttgcatatgttctttcgggaatg 511 Query: 384 tatggcagtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttc 443 ||||| ||| | |||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 512 tatggtcctgttggtcaacttggtgttggaaatgctattctgatcatcctccagcttttc 571 Query: 444 tttgctggcatcattgtcatctgtctagatgaacttctccagaaaggctatggtttgggt 503 |||||||| ||||| || |||||||| || || ||||| ||||| || |||||| | || Sbjct: 572 tttgctggaatcatcgttatctgtcttgacgagcttcttcagaagggatatggtcttggc 631 Query: 504 tctggcatttctctcttcattgctaccaatatctgtga 541 ||||| || ||||| ||||| || |||||||||||||| Sbjct: 632 tctggaatctctcttttcatagcaaccaatatctgtga 669
>gb|AY087495.1| Arabidopsis thaliana clone 36037 mRNA, complete sequence Length = 1595 Score = 321 bits (162), Expect = 1e-84 Identities = 429/518 (82%) Strand = Plus / Plus Query: 24 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 83 |||||||| |||||||| ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 154 gaagtgcaaagtgctgacaggaagattccatttagagagaaagtgatctacactgtcatc 213 Query: 84 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 143 || |||||||||||||| || || |||||||| || |||||||| |||||||| ||||| Sbjct: 214 tccctcttcattttccttgtttgtagtcagcttcctctctatgggatccattctaccacc 273 Query: 144 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 203 || |||||||| ||||| ||||||||||| ||||| ||||| || ||||| || || ||| Sbjct: 274 ggtgctgatccgttctattggatgcgtgtcattctcgcatcgaatcgtggaacggtgatg 333 Query: 204 gagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatcc 263 ||||| |||||||| || ||||| ||||||||| | || |||||||| ||| || || Sbjct: 334 gagcttggtattactcctattgtcacatctggattagtgatgcaactcttagcagggtca 393 Query: 264 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaa 323 ||||||||||| || ||||||| ||| | |||||||||||||| |||||||||| || Sbjct: 394 aagattattgaggttgacaacaatgttcgtgaggatcgtgctctcttgaatggtgctcag 453 Query: 324 aagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatg 383 ||| | || || || |||||||| ||||| || ||||| ||||||||||| || |||||| Sbjct: 454 aagcttcttgggattctgattgctattggtgaggctgttgcatatgttctttcgggaatg 513 Query: 384 tatggcagtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttc 443 ||||| ||| | |||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 514 tatggtcctgttggtcaacttggttttggaaatgctattctgatcatcctccagcttttc 573 Query: 444 tttgctggcatcattgtcatctgtctagatgaacttctccagaaaggctatggtttgggt 503 |||||||| ||||| || |||||||| || || ||||| ||||| || |||||| | || Sbjct: 574 tttgctggaatcatcgttatctgtcttgacgagcttcttcagaagggatatggtcttggc 633 Query: 504 tctggcatttctctcttcattgctaccaatatctgtga 541 ||||| || ||||| ||||| || |||||||||||||| Sbjct: 634 tctggaatctctcttttcatagcaaccaatatctgtga 671
>dbj|AK062048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A12, full insert sequence Length = 1375 Score = 321 bits (162), Expect = 1e-84 Identities = 201/214 (93%) Strand = Plus / Plus Query: 340 tgattgccattggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagcc 399 ||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1 tgattgctattggggaagctgtggcatatgtgctgtctggaatgtatggtagtgtgagcc 60 Query: 400 aacttggaactggaaatgctattctcatcatacttcagcttttctttgctggcatcattg 459 ||||||||||||| ||||| ||||||||||| || || |||||||||||||||||||||| Sbjct: 61 aacttggaactggcaatgccattctcatcatcctacaacttttctttgctggcatcattg 120 Query: 460 tcatctgtctagatgaacttctccagaaaggctatggtttgggttctggcatttctctct 519 | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 121 ttatctgccttgatgaacttctccagaaaggctatggtttgggttctggcatttctctgt 180 Query: 520 tcattgctaccaatatctgtgagaacatcatctg 553 ||||||||||||||||||||||||| |||||||| Sbjct: 181 tcattgctaccaatatctgtgagaatatcatctg 214
>ref|NM_102671.2| Arabidopsis thaliana protein translocase AT1G29310 mRNA, complete cds Length = 1688 Score = 305 bits (154), Expect = 8e-80 Identities = 427/518 (82%) Strand = Plus / Plus Query: 24 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 83 |||||||| |||||||| ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 154 gaagtgcaaagtgctgacaggaagattccatttagagagaaagtgatctacactgtcatc 213 Query: 84 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 143 || |||||||||||||| || || |||||||| || |||||||| |||||||| ||||| Sbjct: 214 tccctcttcattttccttgtttgtagtcagcttcctctctatgggatccattctaccacc 273 Query: 144 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 203 || |||||||| ||||| ||||||||||| ||||| ||||| || ||||| || || ||| Sbjct: 274 ggtgctgatccgttctattggatgcgtgtcattctcgcatcgaatcgtggaacggtgatg 333 Query: 204 gagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatcc 263 ||||| |||||||| || ||||| ||||||||| | || |||||||| ||| || || Sbjct: 334 gagcttggtattactcctattgtcacatctggattagtgatgcaactcttagcagggtca 393 Query: 264 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaa 323 ||||||||||| || ||||||| ||| | |||||||||||||| |||||||||| || Sbjct: 394 aagattattgaggttgacaacaatgttcgtgaggatcgtgctctcttgaatggtgctcag 453 Query: 324 aagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatg 383 ||| | || | || |||| ||| ||||| || ||||| ||||||||||| || |||||| Sbjct: 454 aagcttctttggattctgagtgctattggtgaggctgttgcatatgttctttcgggaatg 513 Query: 384 tatggcagtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttc 443 ||||| ||| | |||||||| ||||||||||||||| ||||| || ||||||||| Sbjct: 514 tatggtcctgttggtcaacttggtgttggaaatgctattctgatcatcctccagcttttc 573 Query: 444 tttgctggcatcattgtcatctgtctagatgaacttctccagaaaggctatggtttgggt 503 |||||||| ||||| || |||||||| || || ||||| ||||| || |||||| | || Sbjct: 574 tttgctggaatcatcgttatctgtcttgacgagcttcttcagaagggatatggtcttggc 633 Query: 504 tctggcatttctctcttcattgctaccaatatctgtga 541 ||||| || ||||| ||||| || |||||||||||||| Sbjct: 634 tctggaatctctcttttcatagcaaccaatatctgtga 671
>ref|NM_001036399.1| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.2 mRNA, complete cds Length = 1961 Score = 285 bits (144), Expect = 8e-74 Identities = 387/468 (82%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 301 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 360 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 361 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 420 Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 421 gatccattctattggatgcgtgtcattcttgcgtccaaccgtggaactgtcatggagctc 480 Query: 210 ggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagatt 269 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||||| Sbjct: 481 ggtattactcctattgttacatctggacttgtgatgcaactcttggctggttccaagatt 540 Query: 270 attgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaagttg 329 ||||| || ||||||| ||| | ||||||||||| || |||||||||| || ||| | Sbjct: 541 attgaggttgacaacaatgttcgtgaggatcgtgccctcttgaatggtgctcagaagctt 600 Query: 330 ctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggc 389 || ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 601 ctaggtattctgattgccattggtgaggctgttgcatatgttctttctggaatgtatggt 660 Query: 390 agtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttctttgct 449 || | || ||||| ||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 661 cccgttggacagcttggtgttggaaatgccattctgatcatccttcagcttttctttgct 720 Query: 450 ggcatcattgtcatctgtctagatgaacttctccagaaaggctatggt 497 || |||||||| ||||| || |||||||| || ||||| || |||||| Sbjct: 721 ggaatcattgttatctgccttgatgaactccttcagaagggatatggt 768
>ref|NM_128976.2| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.1 mRNA, complete cds Length = 1882 Score = 285 bits (144), Expect = 8e-74 Identities = 387/468 (82%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 228 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 287 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 288 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 347 Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 348 gatccattctattggatgcgtgtcattcttgcgtccaaccgtggaactgtcatggagctc 407 Query: 210 ggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagatt 269 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||||| Sbjct: 408 ggtattactcctattgttacatctggacttgtgatgcaactcttggctggttccaagatt 467 Query: 270 attgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaagttg 329 ||||| || ||||||| ||| | ||||||||||| || |||||||||| || ||| | Sbjct: 468 attgaggttgacaacaatgttcgtgaggatcgtgccctcttgaatggtgctcagaagctt 527 Query: 330 ctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggc 389 || ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 528 ctaggtattctgattgccattggtgaggctgttgcatatgttctttctggaatgtatggt 587 Query: 390 agtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttctttgct 449 || | || ||||| ||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 588 cccgttggacagcttggtgttggaaatgccattctgatcatccttcagcttttctttgct 647 Query: 450 ggcatcattgtcatctgtctagatgaacttctccagaaaggctatggt 497 || |||||||| ||||| || |||||||| || ||||| || |||||| Sbjct: 648 ggaatcattgttatctgccttgatgaactccttcagaagggatatggt 695
>gb|BT000507.1| Arabidopsis thaliana endoplasmic reticulum insertion protein (At2g34250/F13P17.9) mRNA, complete cds Length = 1428 Score = 285 bits (144), Expect = 8e-74 Identities = 387/468 (82%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 64 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 123 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 124 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 183 Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 184 gatccattctattggatgcgtgtcattcttgcgtccaaccgtggaactgtcatggagctc 243 Query: 210 ggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagatt 269 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||||| Sbjct: 244 ggtattactcctattgttacatctggacttgtgatgcaactcttggctggttccaagatt 303 Query: 270 attgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaagttg 329 ||||| || ||||||| ||| | ||||||||||| || |||||||||| || ||| | Sbjct: 304 attgaggttgacaacaatgttcgtgaggatcgtgccctcttgaatggtgctcagaagctt 363 Query: 330 ctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggc 389 || ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 364 ctaggtattctgattgccattggtgaggctgttgcatatgttctttctggaatgtatggt 423 Query: 390 agtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttctttgct 449 || | || ||||| ||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 424 cccgttggacagcttggtgttggaaatgccattctgatcatccttcagcttttctttgct 483 Query: 450 ggcatcattgtcatctgtctagatgaacttctccagaaaggctatggt 497 || |||||||| ||||| || |||||||| || ||||| || |||||| Sbjct: 484 ggaatcattgttatctgccttgatgaactccttcagaagggatatggt 531
>gb|AF367298.1| Arabidopsis thaliana At2g34250/F13P17.9 mRNA, complete cds Length = 1804 Score = 285 bits (144), Expect = 8e-74 Identities = 387/468 (82%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 202 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 261 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 262 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 321 Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 322 gatccattctattggatgcgtgtcattcttgcgtccaaccgtggaactgtcatggagctc 381 Query: 210 ggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagatt 269 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||||| Sbjct: 382 ggtattactcctattgttacatctggacttgtgatgcaactcttggctggttccaagatt 441 Query: 270 attgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaagttg 329 ||||| || ||||||| ||| | ||||||||||| || |||||||||| || ||| | Sbjct: 442 attgaggttgacaacaatgttcgtgaggatcgtgccctcttgaatggtgctcagaagctt 501 Query: 330 ctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggc 389 || ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 502 ctaggtattctgattgccattggtgaggctgttgcatatgttctttctggaatgtatggt 561 Query: 390 agtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttctttgct 449 || | || ||||| ||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 562 cccgttggacagcttggtgttggaaatgccattctgatcatccttcagcttttctttgct 621 Query: 450 ggcatcattgtcatctgtctagatgaacttctccagaaaggctatggt 497 || |||||||| ||||| || |||||||| || ||||| || |||||| Sbjct: 622 ggaatcattgttatctgccttgatgaactccttcagaagggatatggt 669
>gb|AY088235.1| Arabidopsis thaliana clone 4598 mRNA, complete sequence Length = 1821 Score = 285 bits (144), Expect = 8e-74 Identities = 387/468 (82%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 228 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 287 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 288 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 347 Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 348 gatccattctattggatgcgtgtcattcttgcgtccaaccgtggaactgtcatggagctc 407 Query: 210 ggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagatt 269 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||||| Sbjct: 408 ggtattactcctattgttacatctggacttgtgatgcaactcttggctggttccaagatt 467 Query: 270 attgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaagttg 329 ||||| || ||||||| ||| | ||||||||||| || |||||||||| || ||| | Sbjct: 468 attgaggttgacaacaatgttcgtgaggatcgtgccctcttgaatggtgctcagaagctt 527 Query: 330 ctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggc 389 || ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 528 ctaggtattctgattgccattggtgaggctgttgcatatgttctttctggaatgtatggt 587 Query: 390 agtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttctttgct 449 || | || ||||| ||||||||| ||||| ||||| |||||||||||||||||| Sbjct: 588 cccgttggacagcttggtgttggaaatgccattctgatcatccttcagcttttctttgct 647 Query: 450 ggcatcattgtcatctgtctagatgaacttctccagaaaggctatggt 497 || |||||||| ||||| || |||||||| || ||||| || |||||| Sbjct: 648 ggaatcattgttatctgccttgatgaactccttcagaagggatatggt 695
>gb|AF190652.1|AF190652 Phaseolus vulgaris putative integral membrane protein (sec61) mRNA, sec61-1 allele, complete cds Length = 2150 Score = 281 bits (142), Expect = 1e-72 Identities = 433/530 (81%) Strand = Plus / Plus Query: 21 ccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtc 80 |||||||| |||| |||||| |||||| | ||||||||||| || || || || || || Sbjct: 100 ccggaagttcagactgctgacaggaaagtgccatttagagagaaggtcatatatactgtg 159 Query: 81 atttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgacc 140 || ||||| |||||||| ||||| |||||||||||||| || ||||| || || || || Sbjct: 160 atctctctgttcatttttctcgtttgcagtcagctccctctgtatggaattcactctaca 219 Query: 141 actggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtc 200 |||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||| ||||| Sbjct: 220 actggagcagatccattctattggatgcgtgttatccttgcttcaaaccgtggaactgtt 279 Query: 201 atggagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtggga 260 |||||||| || || ||||| ||||| || ||||| |||| |||||||| | | || Sbjct: 280 atggagctaggaataacccccattgttacttctgggctggtaatgcaactcttggctggg 339 Query: 261 tccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgca 320 || ||||| |||||||||||||||| |||| | |||||||| ||||| | ||||||||| Sbjct: 340 tcaaagataattgaagtggacaacaatgtgcgggaggatcgagctctcttaaatggtgca 399 Query: 321 caaaagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctgga 380 || ||| | || || ||| |||| || ||||| || || || ||||||||||| ||||| Sbjct: 400 cagaagctacttggcatcttgatagctattggtgaggcagttgcatatgttctatctggg 459 Query: 381 atgtatggcagtgtgagccaacttggaactggaaatgctattctcatcatacttcagctt 440 |||||||| |||||| ||||||||||| |||||||| || ||||| || || ||||| Sbjct: 460 atgtatggtagtgtgggccaacttggagtgggaaatgcaatcctcattatcctccagctc 519 Query: 441 ttctttgctggcatcattgtcatctgtctagatgaacttctccagaaaggctatggtttg 500 | ||||| || || ||||| || ||| ||||||| || || |||||||| ||||||||| Sbjct: 520 tgttttgcgggtattattgtgatatgtttagatgagctccttcagaaagggtatggtttg 579 Query: 501 ggttctggcatttctctcttcattgctaccaatatctgtgagaacatcat 550 || ||||| |||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 580 ggatctggaatttctctattcattgctactaatatatgtgaaaacatcat 629
>emb|BX821829.1|CNS0A807 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 232 bits (117), Expect = 1e-57 Identities = 382/469 (81%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 211 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 270 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 271 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 330 Query: 150 gatcctttctactggatgcg-tgttattcttgcatcaaaccgtggtactgtcatggagct 208 ||||| ||||| |||||||| ||| |||||||| || |||||||| |||||||||||||| Sbjct: 331 gatccattctattggatgcgttgtcattcttgcgtccaaccgtggaactgtcatggagct 390 Query: 209 gggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagat 268 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||| Sbjct: 391 cggtattactcctattgttacatctggacttgtgatgcaactcttggctggtcccaagat 450 Query: 269 tattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaagtt 328 |||||| || ||||||| ||| | |||||| |||| || |||||||||| || ||| | Sbjct: 451 tattgaggttgacaacaatgttcgtgaggattgtgccctcttgaatggtgctcagaagct 510 Query: 329 gctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtatgg 388 || ||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 511 tctaggtattctgattgccattggtgaggctgttgcatatgttctttctggaatgtatgg 570 Query: 389 cagtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttctttgc 448 || | || ||||| ||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 571 tcccgttggacagcttggtgttggaaatgccattctgatcatccttcagcttttctttgc 630 Query: 449 tggcatcattgtcatctgtctagatgaacttctccagaaaggctatggt 497 ||| || ||| | |||| || |||||||| || ||||| || |||||| Sbjct: 631 tggaattatttttttctgccttgatgaactccttcagaagggatatggt 679
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 206 bits (104), Expect = 6e-50 Identities = 239/284 (84%) Strand = Plus / Minus Query: 24 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 83 |||||||| |||||||| ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 10671 gaagtgcaaagtgctgacaggaagattccatttagagagaaagtgatctacactgtcatc 10612 Query: 84 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 143 || |||||||||||||| || || |||||||| || |||||||| |||||||| ||||| Sbjct: 10611 tccctcttcattttccttgtttgtagtcagcttcctctctatgggatccattctaccacc 10552 Query: 144 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 203 || |||||||| ||||| ||||||||||| ||||| ||||| || ||||| || || ||| Sbjct: 10551 ggtgctgatccgttctattggatgcgtgtcattctcgcatcgaatcgtggaacggtgatg 10492 Query: 204 gagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatcc 263 ||||| |||||||| || ||||| ||||||||| | || |||||||| ||| || || Sbjct: 10491 gagcttggtattactcctattgtcacatctggattagtgatgcaactcttagcagggtca 10432 Query: 264 aagattattgaagtggacaacagtgtgagagaggatcgtgctct 307 ||||||||||| || ||||||| ||| | |||||||||||||| Sbjct: 10431 aagattattgaggttgacaacaatgttcgtgaggatcgtgctct 10388 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Minus Query: 339 ctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagc 398 |||| ||| ||||| || ||||| ||||||||||| || ||||||||||| ||| | Sbjct: 10283 ctgagtgctattggtgaggctgttgcatatgttctttcgggaatgtatggtcctgttggt 10224 Query: 399 caacttggaactggaaatgctattctcatcatacttcagcttttctttgctggcatcatt 458 |||||||| ||||||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 10223 caacttggtgttggaaatgctattctgatcatcctccagcttttctttgctggaatcatc 10164 Query: 459 gtcatctgtctagatgaacttctccagaaaggctatggtttgggttctggcatttctctc 518 || |||||||| || || ||||| ||||| || |||||| | || ||||| || ||||| Sbjct: 10163 gttatctgtcttgacgagcttcttcagaagggatatggtcttggctctggaatctctctt 10104 Query: 519 ttcattgctaccaatatctg 538 ||||| || ||||||||||| Sbjct: 10103 ttcatagcaaccaatatctg 10084
>ref|NM_106519.1| Arabidopsis thaliana protein translocase AT1G78720 mRNA, complete cds Length = 1428 Score = 182 bits (92), Expect = 8e-43 Identities = 389/488 (79%) Strand = Plus / Plus Query: 54 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 113 |||||||| ||||| || ||||| || || ||||||||||| ||| | || || ||||| Sbjct: 88 tttagagagaaagtcatatacactgtgatctctctcttcatcttcttggtttgtagtcaa 147 Query: 114 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 173 | || || ||||| |||||||| || || || || ||||| ||||| |||||||| || Sbjct: 148 ttgccactttatggaatccattccactacaggcgcggatccattctattggatgcgcgtc 207 Query: 174 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacatct 233 |||||||| |||| ||| |||||||| |||||||| |||||||| ||||| || || || Sbjct: 208 attcttgcttcaagccgaggtactgttatggagcttggtattacaccaatcgtcacctcc 267 Query: 234 ggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgaga 293 |||||||||||||| ||||| | || |||||||| |||||| | || |||| ||| | Sbjct: 268 ggaatggttatgcagcttcttgctggttccaagatcattgaaatcgataacaatgtccgt 327 Query: 294 gaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgccattggg 353 || || ||||| || ||||||||||||| ||| || |||| ||||| || || |||| Sbjct: 328 gaagaccgtgcactcttgaatggtgcacagaagctgttgggaatcctcatcgcggttggc 387 Query: 354 gaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactgga 413 |||| || ||||||||||| ||||| |||||||| ||||| | |||| ||| ||| Sbjct: 388 caagcagttgcatatgttctctctgggatgtatggtagtgttggggaactaggagttggt 447 Query: 414 aatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtctagat 473 ||||||||||| |||||| ||||||| | ||||||| ||| || || | ||| ||||| Sbjct: 448 aatgctattcttatcatagttcagctctgttttgctgccattatcgttctttgtttagat 507 Query: 474 gaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaat 533 || ||||| |||||||| ||||| | |||||||| ||||| || ||||||||||| ||| Sbjct: 508 gagcttcttcagaaaggttatggcctcggttctggtatttcccttttcattgctactaat 567 Query: 534 atctgtga 541 |||||||| Sbjct: 568 atctgtga 575
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 180 bits (91), Expect = 3e-42 Identities = 229/275 (83%) Strand = Plus / Plus Query: 30 cagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttctctc 89 ||||||||||||||||| | ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 33185 cagagtgctgataggaaggttccattcagagagaaggttatctacactgtcatctctctc 33244 Query: 90 ttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactggagct 149 ||||| || || || ||||||||||| || || ||||| |||||||| ||||| || || Sbjct: 33245 ttcatctttcttgtctgcagtcagcttcctctttatggaatccattccaccaccggtgcg 33304 Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 33305 gatccattctattggatgcgtgtcattcttgcgtccaaccgtggaactgtcatggagctc 33364 Query: 210 ggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaagatt 269 |||||||| || ||||| ||||||||| | || |||||||| | | || ||||||||| Sbjct: 33365 ggtattactcctattgttacatctggacttgtgatgcaactcttggctggttccaagatt 33424 Query: 270 attgaagtggacaacagtgtgagagaggatcgtgc 304 ||||| || ||||||| ||| | ||||||||||| Sbjct: 33425 attgaggttgacaacaatgttcgtgaggatcgtgc 33459 Score = 117 bits (59), Expect = 4e-23 Identities = 155/187 (82%) Strand = Plus / Plus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 ||||||||| || ||| | || ||||| |||||||||||||| || ||||| |||||||| Sbjct: 33623 gaatggtgctcagaagcttctaggtattctgattgccattggtgaggctgttgcatatgt 33682 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||| |||||||||||||| || | || ||||| ||||||||| ||||| ||||| Sbjct: 33683 tctttctggaatgtatggtcccgttggacagcttggtgttggaaatgccattctgatcat 33742 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 |||||||||||||||||||| |||||||| ||||| || |||||||| || ||||| || Sbjct: 33743 ccttcagcttttctttgctggaatcattgttatctgccttgatgaactccttcagaaggg 33802 Query: 491 ctatggt 497 |||||| Sbjct: 33803 atatggt 33809
>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence Length = 119718 Score = 147 bits (74), Expect = 4e-32 Identities = 227/278 (81%) Strand = Plus / Plus Query: 24 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 83 ||||| |||| |||||| |||||| | ||||||||||| || || || || || || || Sbjct: 26518 gaagttcagactgctgacaggaaagtgccatttagagagaaggtcatatatactgtgatc 26577 Query: 84 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 143 ||||| ||||||||| | || ||||||||||| || || ||||| || || ||||| || Sbjct: 26578 tctcttttcattttcttggtctgcagtcagcttcctctatatgggatacactcgacaaca 26637 Query: 144 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 203 || || ||||| ||||| |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 26638 ggtgcagatccgttctattggatgcgtgttatccttgcttcaaaccgtggaactgtcatg 26697 Query: 204 gagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatcc 263 ||||| || || || || ||||| || ||||| | || ||||| ||| | | ||||| Sbjct: 26698 gagcttggaatcactcctattgtcacttctgggctcgtcatgcagcttttggctggatca 26757 Query: 264 aagattattgaagtggacaacagtgtgagagaggatcg 301 |||||||||||||||||||||| |||| |||||||||| Sbjct: 26758 aagattattgaagtggacaacaatgtgcgagaggatcg 26795 Score = 89.7 bits (45), Expect = 9e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 366 tatgttctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctc 425 |||||||| || || |||||||| |||||| ||||||||||| |||||||||||| ||| Sbjct: 27324 tatgttctttcagggatgtatggtagtgtgggccaacttggagttggaaatgctatcctc 27383 Query: 426 atcatacttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccag 485 ||||| | ||||| || ||||| || || ||||| || ||| ||||||| ||||| || Sbjct: 27384 atcattgtccagctcttttttgcgggtattattgtgatttgtttagatgagcttcttcaa 27443 Query: 486 aaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||| |||||| | ||||| || ||||| || ||||| || || |||||||| Sbjct: 27444 aaaggatatggtctaggttcgggaatttccctattcatagcgactaatatctg 27496
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 123 bits (62), Expect = 6e-25 Identities = 152/182 (83%) Strand = Plus / Minus Query: 357 gctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactggaaat 416 ||||| || |||||||| |||||||||||||| ||||| |||| |||||| |||||| Sbjct: 25576 gctgttgcctatgttctttctggaatgtatggtagtgtaggccagcttggagtgggaaat 25517 Query: 417 gctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtctagatgaa 476 || || || ||||| || ||||| || ||||| || ||||||||||| ||| ||||||| Sbjct: 25516 gccatccttatcatcctccagctcttttttgccggtatcattgtcatatgtttagatgag 25457 Query: 477 cttctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatc 536 || || || ||||||||||||||||| ||||| |||||||| |||||||| || |||||| Sbjct: 25456 ctccttcaaaaaggctatggtttgggatctggaatttctctattcattgccactaatatc 25397 Query: 537 tg 538 || Sbjct: 25396 tg 25395 Score = 107 bits (54), Expect = 4e-20 Identities = 204/254 (80%) Strand = Plus / Minus Query: 54 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 113 |||||||| || || ||||| || || || || ||||||||||| || || || |||||| Sbjct: 26000 tttagagagaaggtcatctatacggtgatctccctcttcatttttcttgtttgtagtcag 25941 Query: 114 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 173 || || || ||||| || || ||||| || || || ||||| ||||| |||||||||||| Sbjct: 25940 cttcctctgtatggaatacactcgacaacaggtgcagatccattctattggatgcgtgtt 25881 Query: 174 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacatct 233 || ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 25880 atccttgcttcaaaccgtggaactgttatggagcttggaatcacccccattgtcacttct 25821 Query: 234 ggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgaga 293 ||| | || ||||| ||| | | || || ||||| |||||||| ||||||| ||| | Sbjct: 25820 ggacttgtaatgcagcttttggctggttctaagatcattgaagtcgacaacaatgtccgc 25761 Query: 294 gaggatcgtgctct 307 |||||||||||||| Sbjct: 25760 gaggatcgtgctct 25747
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 123 bits (62), Expect = 6e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 357 gctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactggaaat 416 ||||| || |||||||| |||||||||||||| ||||| |||| |||||| |||||| Sbjct: 109225 gctgttgcctatgttctttctggaatgtatggtagtgtaggccagcttggagtgggaaat 109284 Query: 417 gctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtctagatgaa 476 || || || ||||| || ||||| || ||||| || ||||||||||| ||| ||||||| Sbjct: 109285 gccatccttatcatcctccagctcttttttgccggtatcattgtcatatgtttagatgag 109344 Query: 477 cttctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatc 536 || || || ||||||||||||||||| ||||| |||||||| |||||||| || |||||| Sbjct: 109345 ctccttcaaaaaggctatggtttgggatctggaatttctctattcattgccactaatatc 109404 Query: 537 tg 538 || Sbjct: 109405 tg 109406 Score = 107 bits (54), Expect = 4e-20 Identities = 204/254 (80%) Strand = Plus / Plus Query: 54 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 113 |||||||| || || ||||| || || || || ||||||||||| || || || |||||| Sbjct: 108801 tttagagagaaggtcatctatacggtgatctccctcttcatttttcttgtttgtagtcag 108860 Query: 114 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 173 || || || ||||| || || ||||| || || || ||||| ||||| |||||||||||| Sbjct: 108861 cttcctctgtatggaatacactcgacaacaggtgcagatccattctattggatgcgtgtt 108920 Query: 174 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacatct 233 || ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| || ||| Sbjct: 108921 atccttgcttcaaaccgtggaactgttatggagcttggaatcacccccattgtcacttct 108980 Query: 234 ggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgaga 293 ||| | || ||||| ||| | | || || ||||| |||||||| ||||||| ||| | Sbjct: 108981 ggacttgtaatgcagcttttggctggttctaagatcattgaagtcgacaacaatgtccgc 109040 Query: 294 gaggatcgtgctct 307 |||||||||||||| Sbjct: 109041 gaggatcgtgctct 109054
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 107 bits (54), Expect = 4e-20 Identities = 180/222 (81%) Strand = Plus / Minus Query: 54 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 113 |||||||| ||||| || ||||| || || ||||||||||| ||| | || || ||||| Sbjct: 72173 tttagagagaaagtcatatacactgtgatctctctcttcatcttcttggtttgtagtcaa 72114 Query: 114 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 173 | || || ||||| |||||||| || || || || ||||| ||||| |||||||| || Sbjct: 72113 ttgccactttatggaatccattccactacaggcgcggatccattctattggatgcgcgtc 72054 Query: 174 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacatct 233 |||||||| |||| ||| |||||||| |||||||| |||||||| ||||| || || || Sbjct: 72053 attcttgcttcaagccgaggtactgttatggagcttggtattacaccaatcgtcacctcc 71994 Query: 234 ggaatggttatgcaacttctagtgggatccaagattattgaa 275 |||||||||||||| ||||| | || |||||||| |||||| Sbjct: 71993 ggaatggttatgcagcttcttgctggttccaagatcattgaa 71952 Score = 95.6 bits (48), Expect = 1e-16 Identities = 183/228 (80%) Strand = Plus / Minus Query: 311 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 370 |||||||||||| ||| || |||| ||||| || || |||| |||| || |||||||| Sbjct: 71824 gaatggtgcacagaagctgttgggaatcctcatcgcggttggccaagcagttgcatatgt 71765 Query: 371 tctgtctggaatgtatggcagtgtgagccaacttggaactggaaatgctattctcatcat 430 ||| ||||| |||||||| ||||| | |||| ||| ||| ||||||||||| ||||| Sbjct: 71764 tctctctgggatgtatggtagtgttggggaactaggagttggtaatgctattcttatcat 71705 Query: 431 acttcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaagg 490 | ||||||| | ||||||| ||| || || | ||| ||||||| ||||| |||||||| Sbjct: 71704 agttcagctctgttttgctgccattatcgttctttgtttagatgagcttcttcagaaagg 71645 Query: 491 ctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||| | |||||||| ||||| || ||||||||||| |||||||| Sbjct: 71644 ttatggcctcggttctggtatttcccttttcattgctactaatatctg 71597
>ref|XM_414364.1| PREDICTED: Gallus gallus similar to Sec61 alpha subunit homolog (LOC416023), mRNA Length = 2667 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgag 542 |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 991 cagaaaggatatggtctcggttctggcatctctctcttcattgctaccaatatctgtgag 1050 Query: 543 a 543 | Sbjct: 1051 a 1051
>gb|BC094530.1| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:105264 IMAGE:7320508), complete cds Length = 3061 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| || Sbjct: 603 gatgaactcctgcagaaaggatatggcttgggctctggcatctctctcttcattgcgact 662 Query: 531 aatatctgtgaga 543 ||||||||||||| Sbjct: 663 aatatctgtgaga 675 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 146 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatgga 205 |||||| || |||||||||||||| || ||||| || || ||| | ||||| | ||||| Sbjct: 281 agctgaccccttctactggatgcgagtgattctggcctctaacagaggtaccttgatgga 340 Query: 206 gctgggtat 214 ||||||||| Sbjct: 341 gctgggtat 349
>ref|NM_199256.2| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3061 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| || Sbjct: 603 gatgaactcctgcagaaaggatatggcttgggctctggcatctctctcttcattgcgact 662 Query: 531 aatatctgtgaga 543 ||||||||||||| Sbjct: 663 aatatctgtgaga 675 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 146 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatgga 205 |||||| || |||||||||||||| || ||||| || || ||| | ||||| | ||||| Sbjct: 281 agctgaccccttctactggatgcgagtgattctggcctctaacagaggtaccttgatgga 340 Query: 206 gctgggtat 214 ||||||||| Sbjct: 341 gctgggtat 349
>gb|M96630.1|RATSEC61B Rattus sp. sec61-like protein mRNA, complete cds Length = 1738 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| || Sbjct: 594 gatgaactcctgcagaaaggatatggcttgggctctggcatctctctcttcattgcgact 653 Query: 531 aatatctgtgaga 543 ||||||||||||| Sbjct: 654 aatatctgtgaga 666 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 146 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatgga 205 |||||| || |||||||||||||| || ||||| || || ||| | ||||| | ||||| Sbjct: 272 agctgaccccttctactggatgcgagtgattctggcctctaacagaggtaccttgatgga 331 Query: 206 gctgggtat 214 ||||||||| Sbjct: 332 gctgggtat 340
>gb|AY103472.1| Notothenia angustata Sec61-alpha mRNA, complete cds Length = 1549 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 |||||||| || |||||| |||||||||| || |||||||||||||| ||||| |||||| Sbjct: 578 ctccagaagggttatggtctgggttctggtatctctctcttcattgcgaccaacatctgt 637 Query: 540 gagaacatcatctg 553 |||| |||| |||| Sbjct: 638 gagaccatcgtctg 651
>ref|NM_016906.2| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3040 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 605 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 664 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 665 aacatctgtgaga 677
>gb|BC006020.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone IMAGE:3488736) Length = 2641 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 189 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 248 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 249 aacatctgtgaga 261
>gb|BC003707.1| Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:5676 IMAGE:3592772), complete cds Length = 2982 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 530 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 589 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 590 aacatctgtgaga 602
>dbj|AK153055.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120D02 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3029 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 594 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 653 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 654 aacatctgtgaga 666
>dbj|AK159349.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420017L22 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 3025 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 592 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 651 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 652 aacatctgtgaga 664
>dbj|AK088473.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018I05 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 3040 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 605 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 664 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 665 aacatctgtgaga 677
>dbj|AK054318.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330014L21 product:SEC61, alpha subunit (S. cerevisiae), full insert sequence Length = 2525 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 1440 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 1499 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 1500 aacatctgtgaga 1512
>gb|AC154038.1| Mus musculus 6 BAC RP23-49L8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213878 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 86219 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 86160 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 86159 aacatctgtgaga 86147
>gb|AF222743.1|AF222743 Mus musculus Sec61 alpha-1 mRNA, complete cds Length = 1482 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 526 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 585 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 586 aacatctgtgaga 598
>gb|AF145253.1|AF145253 Mus musculus Sec61 alpha isoform 1 mRNA, complete cds Length = 1482 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 526 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 585 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 586 aacatctgtgaga 598
>dbj|AK197110.1| Mus musculus cDNA, clone:Y1G0124A20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032168, based on BLAT search Length = 388 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 216 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 275 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 276 aacatctgtgaga 288
>dbj|AB032902.1| Mus musculus Sec61 mRNA, complete cds Length = 1804 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 616 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 675 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 676 aacatctgtgaga 688
>dbj|AK167484.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530016O21 product:Sec61 alpha 1 subunit (S. cerevisiae), full insert sequence Length = 2968 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||||||||||||||| || Sbjct: 534 gatgaacttctgcaaaaagggtacggcttgggctctggcatttctctcttcattgcgact 593 Query: 531 aatatctgtgag 542 || ||||||||| Sbjct: 594 aacatctgtgag 605
>ref|XM_875170.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 11 (LOC614128), mRNA Length = 2468 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_875091.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 10 (LOC614128), mRNA Length = 2477 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_875004.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 9 (LOC614128), mRNA Length = 2474 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874932.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 8 (LOC614128), mRNA Length = 2492 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874850.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 7 (LOC614128), mRNA Length = 2474 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874762.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 6 (LOC614128), mRNA Length = 2477 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874677.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 5 (LOC614128), mRNA Length = 2282 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874591.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 4 (LOC614128), mRNA Length = 2165 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874505.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 3 (LOC614128), mRNA Length = 1412 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_864860.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1 (LOC614128), mRNA Length = 2480 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_424024.1| PREDICTED: Gallus gallus similar to Sec61 alpha isoform 2 (LOC426369), partial mRNA Length = 2070 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||||| || ||||||||||||||| | ||||| | ||||| || Sbjct: 371 gatcctttctactggatgcgagtcattcttgcatcaaacagaggtacattgatggaattg 430 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| | || |||||||||||||| Sbjct: 431 ggtatctctcccattgtgacatctgg 456 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtga 541 |||||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 701 cagaaaggttatgggttgggatctggtatttccctctttattgctaccaatatatgtga 759
>ref|XM_756242.1| Ustilago maydis 521 hypothetical protein (UM05188.1) partial mRNA Length = 1398 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 157 tctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctgggtat 214 |||||||||||||||||||||| || |||||||||||||| | |||||||| ||||| Sbjct: 149 tctactggatgcgtgttattctcgcctcaaaccgtggtacgctgatggagctcggtat 206
>gb|BC112848.1| Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1, mRNA (cDNA clone MGC:137488 IMAGE:8168173), complete cds Length = 1924 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 288 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 347 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 348 ggtatctccccaattgtaacatctgg 373
>gb|AY103471.1| Pagothenia borchgrevinki Sec61-alpha mRNA, complete cds Length = 1550 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 |||||||| || |||||| |||||||||| || ||||||||||| || ||||| |||||| Sbjct: 578 ctccagaagggttatggtctgggttctggtatctctctcttcatcgcgaccaacatctgt 637 Query: 540 gagaacatcatctg 553 |||| |||| |||| Sbjct: 638 gagaccatcgtctg 651
>emb|CR405768.1| Gallus gallus finished cDNA, clone ChEST884d22 Length = 870 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||||| || ||||||||||||||| | ||||| | ||||| || Sbjct: 226 gatcctttctactggatgcgagtcattcttgcatcaaacagaggtacattgatggaattg 285 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| | || |||||||||||||| Sbjct: 286 ggtatctctcccattgtgacatctgg 311
>emb|BX929982.2| Gallus gallus finished cDNA, clone ChEST769e24 Length = 1081 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||||| || ||||||||||||||| | ||||| | ||||| || Sbjct: 184 gatcctttctactggatgcgagtcattcttgcatcaaacagaggtacattgatggaattg 243 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| | || |||||||||||||| Sbjct: 244 ggtatctctcccattgtgacatctgg 269 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtga 541 |||||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 514 cagaaaggttatgggttgggatctggtatttccctctttattgctaccaatatatgtga 572
>gb|AY103476.1| Bovichtus variegatus Sec61-alpha mRNA, complete cds Length = 1551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||| || |||||||| ||||| ||| |||| ||||| || |||||||||||||| ||| Sbjct: 570 gatgagctgctccagaagggctacggtctgggctctggtatctctctcttcattgcgacc 629 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 630 aacatctgtgaga 642
>gb|AY103473.1| Hemitripterus americanus Sec61-alpha mRNA, complete cds Length = 1536 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||| || |||||||| ||||||||| |||| ||||| || ||||||||||| || ||| Sbjct: 555 gatgagctgctccagaagggctatggtctgggctctggtatctctctcttcatcgcaacc 614 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 615 aacatctgtgaga 627
>gb|BC044351.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:55256 IMAGE:3815921), complete cds Length = 2605 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgag 542 |||||||| ||||||||||| ||||| || |||||||||||||| || || ||||||||| Sbjct: 615 cagaaaggttatggtttgggctctggtatctctctcttcattgccactaacatctgtgag 674 Query: 543 a 543 | Sbjct: 675 a 675
>gb|BC066715.1| Danio rerio SEC61, alpha subunit, mRNA (cDNA clone MGC:76848 IMAGE:6960771), complete cds Length = 2580 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgag 542 |||||||| ||||||||||| ||||| || |||||||||||||| || || ||||||||| Sbjct: 573 cagaaaggttatggtttgggctctggtatctctctcttcattgccactaacatctgtgag 632 Query: 543 a 543 | Sbjct: 633 a 633
>gb|AY029527.1| Danio rerio Sec61 alpha form A mRNA, complete cds Length = 2602 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgag 542 |||||||| ||||||||||| ||||| || |||||||||||||| || || ||||||||| Sbjct: 633 cagaaaggttatggtttgggctctggtatctctctcttcattgccactaacatctgtgag 692 Query: 543 a 543 | Sbjct: 693 a 693
>ref|NM_153659.1| Danio rerio SEC61, alpha subunit (sec61a), mRNA Length = 2602 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgag 542 |||||||| ||||||||||| ||||| || |||||||||||||| || || ||||||||| Sbjct: 633 cagaaaggttatggtttgggctctggtatctctctcttcattgccactaacatctgtgag 692 Query: 543 a 543 | Sbjct: 693 a 693
>dbj|AK198895.1| Mus musculus cDNA, clone:Y1G0129H24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032168, based on BLAT search Length = 382 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| || ||||| || || ||||| ||||||||||| ||||||||||| || Sbjct: 237 gatgaacttctgcaaaaagggtacggcttgggctctggcatttccctcttcattgcgact 296 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 297 aacatctgtgaga 309
>gb|BC074553.1| Xenopus tropicalis MGC69436 protein, mRNA (cDNA clone MGC:69436 IMAGE:5335742), complete cds Length = 1986 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||| |||| ||||| || ||||||||||||||||| || ||||| Sbjct: 582 cagaaaggctatggtctgggctctggtatctctctcttcattgctacaaacatctg 637 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctgatcctttctactggatg 167 ||||||||||||||||||||| Sbjct: 249 gctgatcctttctactggatg 269
>ref|XM_965057.1| PREDICTED: Tribolium castaneum similar to CG9539-PA (LOC658693), mRNA Length = 1943 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 474 gaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaat 533 ||||| ||||| |||||||| ||| | |||||||||||||| ||||||||||| ||||| Sbjct: 647 gaactcctccaaaaaggctacggtcttggttctggcatttccctcttcattgcaaccaac 706 Query: 534 atctgtga 541 || ||||| Sbjct: 707 atttgtga 714 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 201 atggagctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtggga 260 |||||| |||||||| |||| ||||| || || ||| || ||||||||||||||| ||| Sbjct: 377 atggagttgggtatttccccgattgttacttccggattgattatgcaacttctagcagga 436 Query: 261 tccaagattattgaagt 277 | ||||| |||||||| Sbjct: 437 gcgaagataattgaagt 453
>ref|NM_001004801.2| Xenopus tropicalis MGC69436 protein (MGC69436), mRNA Length = 2352 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||| |||| ||||| || ||||||||||||||||| || ||||| Sbjct: 577 cagaaaggctatggtctgggctctggtatctctctcttcattgctacaaacatctg 632 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctgatcctttctactggatg 167 ||||||||||||||||||||| Sbjct: 244 gctgatcctttctactggatg 264
>emb|CR848298.2| Xenopus tropicalis finished cDNA, clone TNeu057c05 Length = 2352 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 483 cagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctg 538 ||||||||||||||| |||| ||||| || ||||||||||||||||| || ||||| Sbjct: 577 cagaaaggctatggtctgggctctggtatctctctcttcattgctacaaacatctg 632 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctgatcctttctactggatg 167 ||||||||||||||||||||| Sbjct: 244 gctgatcctttctactggatg 264
>ref|XM_535191.2| PREDICTED: Canis familiaris similar to Sec61, alpha subunit 2 (LOC478007), mRNA Length = 2026 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||||||||| |||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 403 gatcctttctattggatgagagttattcttgcatccaacagaggaactttaatggaattg 462 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 463 ggtatctccccaattgtaacatctgg 488
>ref|XM_341558.2| PREDICTED: Rattus norvegicus Sec61, alpha subunit 2 (S. cerevisiae) (predicted) (Sec61a2_predicted), mRNA Length = 2169 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 380 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 439 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| |||||||| Sbjct: 440 ggtatttccccaattgtaacatctgg 465
>emb|CT033488.1| Platynereis dumerilii EST IB0AAA19BF12EM1 Length = 872 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||||||| Sbjct: 537 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgctacc 596 Query: 531 aa 532 || Sbjct: 597 aa 598
>emb|CT033472.1| Platynereis dumerilii EST IB0AAA19CE06EM1 Length = 921 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||||||| Sbjct: 593 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgctacc 652 Query: 531 aa 532 || Sbjct: 653 aa 654
>emb|CT033433.1| Platynereis dumerilii EST IB0AAA20BF03EM1 Length = 905 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||||||| Sbjct: 554 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgctacc 613 Query: 531 aa 532 || Sbjct: 614 aa 615
>emb|CT033303.1| Platynereis dumerilii EST IB0AAA22DD05EM1 Length = 836 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||||||| Sbjct: 625 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgctacc 684 Query: 531 aa 532 || Sbjct: 685 aa 686
>emb|CT033062.1| Platynereis dumerilii EST IB0AAA27BF01EM1 Length = 887 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||||||| Sbjct: 621 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgctacc 680 Query: 531 aa 532 || Sbjct: 681 aa 682
>emb|CT032306.1| Platynereis dumerilii EST IB0AAA41AB04EM1 Length = 937 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||||||| Sbjct: 593 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgctacc 652 Query: 531 aa 532 || Sbjct: 653 aa 654
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 82198 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 82257 Query: 210 ggtat 214 ||||| Sbjct: 82258 ggtat 82262
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 5863 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 5922 Query: 210 ggtat 214 ||||| Sbjct: 5923 ggtat 5927
>dbj|AB062670.1| Drosophila melanogaster mRNA for DSec61alpha, complete cds Length = 1984 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 266 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 325 Query: 210 ggtat 214 ||||| Sbjct: 326 ggtat 330
>ref|NM_135190.3| Drosophila melanogaster Sec61 CG9539-RA (Sec61alpha), mRNA Length = 2046 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 337 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 396 Query: 210 ggtat 214 ||||| Sbjct: 397 ggtat 401
>gb|AY069569.1| Drosophila melanogaster LD29847 full length cDNA Length = 1652 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 283 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 342 Query: 210 ggtat 214 ||||| Sbjct: 343 ggtat 347
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 262009 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 261950 Query: 210 ggtat 214 ||||| Sbjct: 261949 ggtat 261945
>ref|NM_201577.1| Danio rerio SEC61, beta subunit (sec61b), mRNA Length = 2550 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 ||||| || |||||||| ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct: 573 ctccaaaagggctatggattgggctctggtatctctctcttcatcgccaccaacatctgt 632 Query: 540 gaga 543 |||| Sbjct: 633 gaga 636
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 ||||| || |||||||| ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct: 78264 ctccaaaagggctatggattgggctctggtatctctctcttcatcgccaccaacatctgt 78323 Query: 540 gaga 543 |||| Sbjct: 78324 gaga 78327
>ref|XM_628281.1| Cryptosporidium parvum Iowa II putative Sec61 (cgd7_950), partial mRNA Length = 1422 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 486 aaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtga 541 |||||||||||| | || || || ||||| ||||| |||||||||||||||||||| Sbjct: 520 aaaggctatggtcttggatcaggtatttcactctttattgctaccaatatctgtga 575
>gb|AY034614.1| Danio rerio Sec61 alpha form B mRNA, complete cds Length = 2550 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 ||||| || |||||||| ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct: 573 ctccaaaagggctatggattgggctctggtatctctctcttcatcgccaccaacatctgt 632 Query: 540 gaga 543 |||| Sbjct: 633 gaga 636
>gb|BC048881.1| Danio rerio SEC61, beta subunit, mRNA (cDNA clone MGC:55672 IMAGE:3815496), complete cds Length = 2396 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 480 ctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatctgt 539 ||||| || |||||||| ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct: 574 ctccaaaagggctatggattgggctctggtatctctctcttcatcgccaccaacatctgt 633 Query: 540 gaga 543 |||| Sbjct: 634 gaga 637
>ref|XM_660476.1| Cryptosporidium hominis TU502 Pfsec61 (Chro.70118) partial mRNA Length = 1422 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 489 ggctatggtttgggttctggcatttctctcttcattgctaccaatatctgtgaga 543 ||||||||| | || || || ||||| ||||| |||||||||||||||||||||| Sbjct: 523 ggctatggtcttggatcaggtatttcactctttattgctaccaatatctgtgaga 577
>ref|NM_021305.2| Mus musculus Sec61, alpha subunit 2 (S. cerevisiae) (Sec61a2), mRNA Length = 2369 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 268 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 327 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 328 ggtatttccccaattgtaacgtctgg 353
>gb|BC005458.1| Mus musculus Sec61, alpha subunit 2 (S. cerevisiae), mRNA (cDNA clone MGC:6359 IMAGE:3494001), complete cds Length = 2139 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 211 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 270 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 271 ggtatttccccaattgtaacgtctgg 296
>dbj|AK136447.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030227K22 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 1304 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 247 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 306 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 307 ggtatttccccaattgtaacgtctgg 332
>dbj|AK161316.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930402A17 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 563 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 347 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 406 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 407 ggtatttccccaattgtaacgtctgg 432
>dbj|AK160602.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610019K07 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2362 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 254 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 313 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 314 ggtatttccccaattgtaacgtctgg 339
>dbj|AK077701.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730536E22 product:SEC61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2369 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 268 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 327 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 328 ggtatttccccaattgtaacgtctgg 353
>dbj|AK017615.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730434P03 product:SEC61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2111 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 250 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 309 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 310 ggtatttccccaattgtaacgtctgg 335
>gb|AF222748.1|AF222748 Mus musculus Sec61 alpha-2 mRNA, complete cds Length = 1488 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 205 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 264 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 265 ggtatttccccaattgtaacgtctgg 290
>gb|AF145254.1|AF145254 Mus musculus Sec61 alpha isoform 2 mRNA, complete cds Length = 1487 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 204 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 263 Query: 210 ggtattaccccaattgtgacatctgg 235 |||||| |||||||||| || ||||| Sbjct: 264 ggtatttccccaattgtaacgtctgg 289
>emb|CT033653.1| Platynereis dumerilii EST IB0AAA16CF07EM1 Length = 949 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 623 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgccacc 682 Query: 531 aa 532 || Sbjct: 683 aa 684
>emb|CT033241.1| Platynereis dumerilii EST IB0AAA24BD10EM1 Length = 875 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 621 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgccacc 680 Query: 531 aa 532 || Sbjct: 681 aa 682
>emb|CT033155.1| Platynereis dumerilii EST IB0AAA25DB06EM1 Length = 940 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||||| ||| Sbjct: 621 gatgaacttctgcagaagggatatggattgggatctggtatctcactcttcattgccacc 680 Query: 531 aa 532 || Sbjct: 681 aa 682
>ref|NM_070392.3| Caenorhabditis elegans Y57G11C.15 (Y57G11C.15) mRNA, complete cds Length = 1811 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 477 cttctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatc 536 |||||||| || || |||||| | || || || ||||||||||||||||| ||||| ||| Sbjct: 586 cttctccaaaagggatatggtctcggatccggaatttctctcttcattgccaccaacatc 645 Query: 537 tgtga 541 ||||| Sbjct: 646 tgtga 650 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagct 208 ||||| ||||||||| | ||||||||| | || || |||||||||||| | |||||||| Sbjct: 262 gatccattctactggcttcgtgttattatggcttccaaccgtggtactcttatggagct 320
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Minus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 ||||| || |||||||| ||||| ||| | || ||||| || || ||||||||||| ||| Sbjct: 14348 gatgagctcctccagaagggctacggtcttggctctggtatctcactcttcattgccacc 14289 Query: 531 aatatctgtgaga 543 || |||||||||| Sbjct: 14288 aacatctgtgaga 14276 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccg 190 |||||||||||||||||| | || ||||| || |||||||| Sbjct: 15061 gatcctttctactggatgagagtaattctggcttcaaaccg 15021
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence Length = 313573 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 477 cttctccagaaaggctatggtttgggttctggcatttctctcttcattgctaccaatatc 536 |||||||| || || |||||| | || || || ||||||||||||||||| ||||| ||| Sbjct: 186601 cttctccaaaagggatatggtctcggatccggaatttctctcttcattgccaccaacatc 186542 Query: 537 tgtga 541 ||||| Sbjct: 186541 tgtga 186537 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Minus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagct 208 ||||| ||||||||| | ||||||||| | || || |||||||||||| | |||||||| Sbjct: 186974 gatccattctactggcttcgtgttattatggcttccaaccgtggtactcttatggagct 186916
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 48.1 bits (24), Expect = 0.031 Identities = 96/120 (80%) Strand = Plus / Plus Query: 434 tcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaaggcta 493 |||||| ||| | ||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 42381 tcagctgttcatggctggcatcatcgtcatctgccttgatgagctgctgcagaagggcta 42440 Query: 494 tggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcatctg 553 || |||| || || || || |||||||| || ||||| ||||| ||| ||||||||| Sbjct: 42441 cggcctgggctcgggtatctccctcttcatcgccaccaacatctgcgagtccatcatctg 42500
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 48.1 bits (24), Expect = 0.031 Identities = 96/120 (80%) Strand = Plus / Plus Query: 434 tcagcttttctttgctggcatcattgtcatctgtctagatgaacttctccagaaaggcta 493 |||||| ||| | ||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 21094 tcagctgttcatggctggcatcatcgtcatctgccttgatgagctgctgcagaagggcta 21153 Query: 494 tggtttgggttctggcatttctctcttcattgctaccaatatctgtgagaacatcatctg 553 || |||| || || || || |||||||| || ||||| ||||| ||| ||||||||| Sbjct: 21154 cggcctgggctcgggtatctccctcttcatcgccaccaacatctgcgagtccatcatctg 21213
>gb|AY613855.1| Oikopleura dioica clone BACOIKO007 10xi11, complete sequence Length = 104968 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 146 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtact 197 ||||||||| || |||||||| || |||||||| || || |||||||||||| Sbjct: 12715 agctgatcccttttactggatccgagttattctcgcttccaaccgtggtact 12766
>ref|XM_516725.1| PREDICTED: Pan troglodytes similar to Sec61 alpha subunit homolog (LOC460669), mRNA Length = 804 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 610 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 669 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 670 aacatctgtga 680
>gb|BC002951.1| Homo sapiens protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:1086 IMAGE:3510682), complete cds Length = 3571 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 587 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 646 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 647 aacatctgtga 657
>emb|AL832821.1|HSM804132 Homo sapiens mRNA; cDNA DKFZp667E1224 (from clone DKFZp667E1224) Length = 3600 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 613 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 672 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 673 aacatctgtga 683
>emb|CR860842.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0814 (from clone DKFZp469H0814) Length = 3582 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 608 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 667 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 668 aacatctgtga 678
>emb|CR859335.1| Pongo pygmaeus mRNA; cDNA DKFZp469D1920 (from clone DKFZp469D1920) Length = 3576 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 607 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 666 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 667 aacatctgtga 677
>emb|CR623601.1| full-length cDNA clone CS0DI026YB08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1674 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 579 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 638 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 639 aacatctgtga 649
>dbj|AK074928.1| Homo sapiens cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to Canis familiaris sec61 homologue mRNA Length = 3238 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 288 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 347 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 348 aacatctgtga 358
>dbj|AK074706.1| Homo sapiens cDNA FLJ90225 fis, clone NT2RM1000855, highly similar to Protein transport protein Sec61 alpha subunitisoform 1 Length = 3635 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 680 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 739 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 740 aacatctgtga 750
>dbj|AK027423.1| Homo sapiens cDNA FLJ14517 fis, clone NT2RM1000833, highly similar to Homo sapiens sec61 homolog mRNA Length = 3635 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 680 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 739 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 740 aacatctgtga 750
>gb|AF346602.1|AF346602 Homo sapiens Sec61 alpha form 1 mRNA, complete cds Length = 1680 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 562 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 621 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 622 aacatctgtga 632
>ref|NM_013336.3| Homo sapiens Sec61 alpha 1 subunit (S. cerevisiae) (SEC61A1), mRNA Length = 3656 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 680 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 739 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 740 aacatctgtga 750
>gb|AF077032.1| Homo sapiens sec61 homolog mRNA, complete cds Length = 3561 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 586 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 645 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 646 aacatctgtga 656
>gb|AC011311.11| Homo sapiens 3 BAC RP11-525K18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187628 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 19865 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 19806 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 19805 aacatctgtga 19795
>gb|AF084458.1|HSEC61 Homo sapiens sec61 homolog mRNA, complete cds Length = 3561 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 471 gatgaacttctccagaaaggctatggtttgggttctggcatttctctcttcattgctacc 530 |||||||| || || ||||| ||||| | || ||||| ||||||||||||||||| || Sbjct: 586 gatgaactcctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaact 645 Query: 531 aatatctgtga 541 || |||||||| Sbjct: 646 aacatctgtga 656
>emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on chromosome 2, complete sequence Length = 195936 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 150 gatcctttctactggatgcgtgttattcttgcatc 184 ||||| |||||||||||| | |||||||||||||| Sbjct: 100487 gatcccttctactggatgagagttattcttgcatc 100453
>ref|XM_507657.1| PREDICTED: Pan troglodytes similar to Sec61 alpha isoform 2 (LOC450305), mRNA Length = 1714 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 287 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 346 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 347 ggtatctccccaattgtaacatctgg 372
>ref|NM_001004374.1| Gallus gallus hemoglobin, zeta (HBZ), mRNA Length = 429 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 337 tcctgattgccattggggaagctgtg 362 |||||| ||||||||||||||||||| Sbjct: 188 tcctgaatgccattggggaagctgtg 213
>gb|AY298909.1| Trypanosoma cruzi cosmid C2 mucin-like protein and gp85-like protein (gp-85) genes, complete cds; and unknown genes Length = 30331 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 attttcctcgtgtgcagtcagc 114 |||||||||||||||||||||| Sbjct: 7980 attttcctcgtgtgcagtcagc 7959
>gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete sequence Length = 103190 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 337 tcctgattgccattggggaagctgtg 362 |||||| ||||||||||||||||||| Sbjct: 47081 tcctgaatgccattggggaagctgtg 47106
>ref|NM_018144.2| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae) (SEC61A2), mRNA Length = 1892 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 266 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 325 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 326 ggtatctccccaattgtaacatctgg 351
>ref|XM_799853.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511565.15) partial mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 attttcctcgtgtgcagtcagc 114 |||||||||||||||||||||| Sbjct: 565 attttcctcgtgtgcagtcagc 586
>ref|XM_801313.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511611.11) partial mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 attttcctcgtgtgcagtcagc 114 |||||||||||||||||||||| Sbjct: 238 attttcctcgtgtgcagtcagc 259
>ref|XM_816611.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508873.130) partial mRNA Length = 546 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 attttcctcgtgtgcagtcagc 114 |||||||||||||||||||||| Sbjct: 241 attttcctcgtgtgcagtcagc 262
>ref|XM_812768.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506499.120) partial mRNA Length = 549 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 attttcctcgtgtgcagtcagc 114 |||||||||||||||||||||| Sbjct: 244 attttcctcgtgtgcagtcagc 265
>ref|XM_814632.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506763.210) partial mRNA Length = 549 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 attttcctcgtgtgcagtcagc 114 |||||||||||||||||||||| Sbjct: 244 attttcctcgtgtgcagtcagc 265
>emb|V00408.1|GGGL01 Gallus gallus gene coding for embryonic alpha-globin pi-prime Length = 1836 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 337 tcctgattgccattggggaagctgtg 362 |||||| ||||||||||||||||||| Sbjct: 1147 tcctgaatgccattggggaagctgtg 1172
>gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203981 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 195 actgtcatggagctgggtatta 216 |||||||||||||||||||||| Sbjct: 141251 actgtcatggagctgggtatta 141230
>gb|BC026179.1| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae), mRNA (cDNA clone MGC:32910 IMAGE:4823130), complete cds Length = 2220 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 275 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 334 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 335 ggtatctccccaattgtaacatctgg 360
>dbj|AK057532.1| Homo sapiens cDNA FLJ32970 fis, clone TESTI2008840, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2305 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 399 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 458 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 459 ggtatctccccaattgtaacatctgg 484
>dbj|AK022640.1| Homo sapiens cDNA FLJ12578 fis, clone NT2RM4001054, moderately similar to Homo sapiens sec61 homolog mRNA Length = 2026 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 260 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 319 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 320 ggtatctccccaattgtaacatctgg 345
>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11, complete sequence Length = 179563 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 tgctgaatggtgcacaaaagtt 328 |||||||||||||||||||||| Sbjct: 81367 tgctgaatggtgcacaaaagtt 81346
>gb|AF098919.2| Gallus gallus embryonic alpha-type globin pi, adult alpha D globin, and adult alpha A globin genes, complete cds Length = 29615 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 337 tcctgattgccattggggaagctgtg 362 |||||| ||||||||||||||||||| Sbjct: 18575 tcctgaatgccattggggaagctgtg 18600
>emb|CR387670.1| Gallus gallus finished cDNA, clone ChEST660l10 Length = 626 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 337 tcctgattgccattggggaagctgtg 362 |||||| ||||||||||||||||||| Sbjct: 400 tcctgaatgccattggggaagctgtg 375
>gb|AF346603.1|AF346603 Homo sapiens Sec61 alpha form 2 mRNA, complete cds Length = 1893 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 266 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 325 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 326 ggtatctccccaattgtaacatctgg 351
>gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromosome ul, complete sequence Length = 227366 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 337 tcctgattgccattggggaagctgtg 362 |||||| ||||||||||||||||||| Sbjct: 93085 tcctgaatgccattggggaagctgtg 93060
>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233119 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gtgctgataggaaaataccatt 55 |||||||||||||||||||||| Sbjct: 38655 gtgctgataggaaaataccatt 38676
>emb|AL953861.5| Zebrafish DNA sequence from clone CH211-132C16, complete sequence Length = 165789 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 ttttctttgctggcatcattgt 460 |||||||||||||||||||||| Sbjct: 132145 ttttctttgctggcatcattgt 132166
>emb|AL713985.10| Mouse DNA sequence from clone RP23-104K14 on chromosome 10, complete sequence Length = 199286 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 gtgctgataggaaaataccatt 55 |||||||||||||||||||||| Sbjct: 58195 gtgctgataggaaaataccatt 58174
>dbj|AB046850.1| Homo sapiens mRNA for KIAA1630 protein, partial cds Length = 5275 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | |||||||| || || || | || ||| | ||||| || Sbjct: 2865 gatcctttctactggatgagagttattctggcttccaatagaggaactttaatggaattg 2924 Query: 210 ggtattaccccaattgtgacatctgg 235 ||||| |||||||||| |||||||| Sbjct: 2925 ggtatctccccaattgtaacatctgg 2950
>gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, complete sequence Length = 166651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 catttctctcttcattttcct 100 ||||||||||||||||||||| Sbjct: 149219 catttctctcttcattttcct 149239
>gb|AC150557.1| Drosophila melanogaster clone BACR06K04, complete sequence Length = 170918 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tttctctcttcattttcctcg 102 ||||||||||||||||||||| Sbjct: 129890 tttctctcttcattttcctcg 129910
>gb|DQ155538.1| Hepatitis C virus strain D61 NS5b protein gene, partial cds Length = 342 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 gaatgtatggcagtgtgagcc 399 ||||||||||||||||||||| Sbjct: 83 gaatgtatggcagtgtgagcc 63
>gb|BC045117.1| Xenopus laevis protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:53497 IMAGE:5572471), complete cds Length = 1894 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctgatcctttctactggatg 167 ||||||||||||||||||||| Sbjct: 255 gctgatcctttctactggatg 275
>gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, complete sequence Length = 136723 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aaaataccatttagagaaaaa 65 ||||||||||||||||||||| Sbjct: 3584 aaaataccatttagagaaaaa 3564
>gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, complete sequence Length = 132532 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 gtgagccaacttggaactgga 413 ||||||||||||||||||||| Sbjct: 24156 gtgagccaacttggaactgga 24136
>emb|AL353616.14| Human DNA sequence from clone RP11-274B18 on chromosome 9 Contains the 3' end of the PGM5 gene for phosphoglucomutase 5 (PGMRP), a novel gene (MGC34760), a squamous cell carcinoma antigen recognized by T cell (SART2) pseudogene and 2 novel genes, complete sequence Length = 169993 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 tgataggaaaataccatttagagaa 62 |||||||||||||||||||| |||| Sbjct: 141653 tgataggaaaataccatttaaagaa 141677
>gb|AY113841.1| Dissostichus mawsoni Sec61 (SEC61) mRNA, complete cds Length = 1441 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | || ||||| || |||||| | ||||| | |||||||| Sbjct: 178 gatcctttctactggatgagagtcattctggcctcaaacagaggtaccctgatggagctc 237 Query: 210 ggtat 214 ||||| Sbjct: 238 ggtat 242
>gb|AY113840.1| Harpagifer antarcticus Sec61 (SEC61) mRNA, complete cds Length = 1453 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 |||||||||||||||||| | || ||||| || |||||| | ||||| | |||||||| Sbjct: 200 gatcctttctactggatgagagtcattctggcctcaaacagaggtaccctgatggagctc 259 Query: 210 ggtat 214 ||||| Sbjct: 260 ggtat 264
>gb|AY103475.1| Gadus ogac Sec61-alpha mRNA, complete cds Length = 2483 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | || || || || || ||| | |||||| ||||||||||| Sbjct: 284 gatccattctactggatgagagtaatcctggcttccaacagaggtactctcatggagctg 343 Query: 210 ggtat 214 ||||| Sbjct: 344 ggtat 348
>gb|AY103474.1| Boreogadus saida Sec61-alpha mRNA, complete cds Length = 2472 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 209 ||||| |||||||||||| | || || || || || ||| | |||||| ||||||||||| Sbjct: 264 gatcccttctactggatgagagtaatcctggcttccaacagaggtactctcatggagctg 323 Query: 210 ggtat 214 ||||| Sbjct: 324 ggtat 328
>gb|AC073160.8| Homo sapiens chromosome 10 clone RP11-348G8, complete sequence Length = 189817 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 gatcctttctactggatgcgtgttattct 178 |||||||||||||||||| | |||||||| Sbjct: 140035 gatcctttctactggatgagagttattct 140063
>gb|AC099309.1| Drosophila melanogaster, chromosome 4, region 101C-101D, BAC clone BACR16H06, complete sequence Length = 157561 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 tttctctcttcattttcctcg 102 ||||||||||||||||||||| Sbjct: 44639 tttctctcttcattttcctcg 44619
>gb|AC010576.16| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACR30L15, complete sequence Length = 175192 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tttctctcttcattttcctcg 102 ||||||||||||||||||||| Sbjct: 160519 tttctctcttcattttcctcg 160539
>gb|AC122764.12| Mus musculus chromosome 15, clone RP24-93B16, complete sequence Length = 209493 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 tcatttctctcttcattttcc 99 ||||||||||||||||||||| Sbjct: 49425 tcatttctctcttcattttcc 49405
>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete sequence Length = 328561 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 tttctctcttcattttcctcg 102 ||||||||||||||||||||| Sbjct: 272858 tttctctcttcattttcctcg 272878
>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence Length = 201383 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 catttctctcttcattttcct 100 ||||||||||||||||||||| Sbjct: 108829 catttctctcttcattttcct 108809
>ref|XM_521283.1| PREDICTED: Pan troglodytes similar to HIV TAT specific factor 1; cofactor required for Tat activation of HIV-1 transcription (LOC465882), mRNA Length = 3627 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 189 tggaaatgctattctcatca 208
>ref|XM_509707.1| PREDICTED: Pan troglodytes similar to FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1; chondrocyte-derived ezrin-like protein (LOC452632), mRNA Length = 6224 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 4072 cagctcccgctctatggcat 4091
>ref|NM_001727.1| Homo sapiens bombesin-like receptor 3 (BRS3), mRNA Length = 1413 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 338 tggaaatgctattctcatca 357
>ref|NM_005766.2| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) (FARP1), transcript variant 1, mRNA Length = 5028 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 2746 cagctcccgctctatggcat 2765
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gattattgaagtggacaaca 285 |||||||||||||||||||| Sbjct: 61931 gattattgaagtggacaaca 61950
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tgggtatcctgattgccatt 350 |||||||||||||||||||| Sbjct: 88612 tgggtatcctgattgccatt 88631
>gb|AY585193.1| Homo sapiens bombesin-like receptor 3 mRNA, complete cds Length = 1200 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 189 tggaaatgctattctcatca 208
>ref|XM_584211.2| PREDICTED: Bos taurus similar to Bombesin receptor subtype-3 (BRS-3) (LOC539011), mRNA Length = 1344 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 333 tggaaatgctattctcatca 352
>gb|AY350447.1| Macaca mulatta bombesin-like receptor subtype 3 (BRS3) mRNA, complete cds Length = 1249 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 220 tggaaatgctattctcatca 239
>ref|NM_001032902.1| Macaca mulatta bombesin-like receptor subtype 3 (BRS3), mRNA Length = 1249 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 220 tggaaatgctattctcatca 239
>ref|XM_849676.1| PREDICTED: Canis familiaris similar to Bombesin receptor subtype-3 (BRS-3) (LOC613002), mRNA Length = 1339 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 328 tggaaatgctattctcatca 347
>emb|BX936436.13| Zebrafish DNA sequence from clone DKEY-16H19 in linkage group 6, complete sequence Length = 200434 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 atgtatggcagtgtgagcca 400 |||||||||||||||||||| Sbjct: 64530 atgtatggcagtgtgagcca 64511
>ref|XM_739092.1| Plasmodium chabaudi chabaudi Pfsec61 (PC000811.01.0) partial mRNA Length = 1413 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 149 tgatcctttctactggatgcgtgttattcttgcatcaaac 188 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 171 tgatccgttttattggatgcgtgttattttagcatcaaac 210
>ref|XM_816912.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508221.350) partial mRNA Length = 1044 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tttcctcgtgtgcagtcagc 114 |||||||||||||||||||| Sbjct: 564 tttcctcgtgtgcagtcagc 583
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gacaacagtgtgagagagga 298 |||||||||||||||||||| Sbjct: 162300 gacaacagtgtgagagagga 162319
>gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complete sequence Length = 205069 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tcatttctctcttcattttc 98 |||||||||||||||||||| Sbjct: 127689 tcatttctctcttcattttc 127708
>ref|XM_725300.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02510) partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 149 tgatcctttctactggatgcgtgttattcttgcatcaaac 188 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 315 tgatccgttttattggatgcgtgttattttagcatcaaac 354
>ref|XM_663982.1| Plasmodium berghei strain ANKA hypothetical protein (PB301116.00.0) partial mRNA Length = 459 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 149 tgatcctttctactggatgcgtgttattcttgcatcaaac 188 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 171 tgatccgttttattggatgcgtgttattttagcatcaaac 210
>gb|AF125953.2| Caenorhabditis elegans cosmid F53E2, complete sequence Length = 11756 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tctcttcattttcctcgtgt 105 |||||||||||||||||||| Sbjct: 7090 tctcttcattttcctcgtgt 7109
>gb|AC136506.10| Medicago truncatula clone mth2-33c8, complete sequence Length = 135457 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 catttctctcttcattttcctcgt 103 |||||||||||||| ||||||||| Sbjct: 123941 catttctctcttcaatttcctcgt 123918
>emb|Z97632.3|HS196E23 Human DNA sequence from clone RP1-196E23 on chromosome Xq26.1-27.2 Contains the VGLL1 gene for vestgial like 1 (Drosophila), the HTATSF1 gene for HIV TAT specific factor 1, the BRS3 gene for bombesin-like receptor 3 and a CpG island, complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 86211 tggaaatgctattctcatca 86192
>emb|AL355343.18| Human DNA sequence from clone RP11-455I14 on chromosome 6 Contains the 5' end of the TIAM2 gene for T-cell lymphoma invasion and metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)), complete sequence Length = 179262 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 tgattgccattggggaagctgtgg 363 |||||||||||||||||| ||||| Sbjct: 39045 tgattgccattggggaaggtgtgg 39068
>emb|AL137249.29| Human DNA sequence from clone RP11-111L24 on chromosome 13q31.3-32.3 Contains the 3' end of the FARP1 gene for (chondrocyte-derived) FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1, a novel gene and the 3' end of the STK24 gene for serine/threonine kinase 24, complete sequence Length = 106578 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 45431 cagctcccgctctatggcat 45450
>gb|BC071592.1| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived), mRNA (cDNA clone MGC:87400 IMAGE:30342239), complete cds Length = 4932 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 2742 cagctcccgctctatggcat 2761
>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the 5' end of the Dbccr1 gene for deleted in bladder cancer 1, complete sequence Length = 186197 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tttctctcttcattttcctc 101 |||||||||||||||||||| Sbjct: 173913 tttctctcttcattttcctc 173932
>emb|AL117530.1|HSM801054 Homo sapiens mRNA; cDNA DKFZp434B172 (from clone DKFZp434B172) Length = 2658 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tgggttctggcatttctctc 518 |||||||||||||||||||| Sbjct: 1005 tgggttctggcatttctctc 986
>gb|AC087240.17| Homo sapiens 12p BAC RP11-752F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198068 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tacttcagcttttctttgct 449 |||||||||||||||||||| Sbjct: 46314 tacttcagcttttctttgct 46295
>ref|XM_934359.1| PREDICTED: Homo sapiens chromosome 3 open reading frame 41, transcript variant 5 (C3orf41), mRNA Length = 2120 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tgggttctggcatttctctc 518 |||||||||||||||||||| Sbjct: 455 tgggttctggcatttctctc 436
>ref|XM_046264.9| PREDICTED: Homo sapiens chromosome 3 open reading frame 41, transcript variant 1 (C3orf41), mRNA Length = 2546 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tgggttctggcatttctctc 518 |||||||||||||||||||| Sbjct: 1686 tgggttctggcatttctctc 1667
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 catggagctgggtattaccc 219 |||||||||||||||||||| Sbjct: 1935947 catggagctgggtattaccc 1935928
>gb|AC092042.2| Homo sapiens chromosome 3 clone RP11-136C24, complete sequence Length = 171974 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tgggttctggcatttctctc 518 |||||||||||||||||||| Sbjct: 92565 tgggttctggcatttctctc 92546
>gb|AC172375.3| Pan troglodytes BAC clone CH251-541M22 from chromosome unknown, complete sequence Length = 207989 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tcatttctctcttcattttc 98 |||||||||||||||||||| Sbjct: 92300 tcatttctctcttcattttc 92281
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tgggtatcctgattgccatt 350 |||||||||||||||||||| Sbjct: 26965168 tgggtatcctgattgccatt 26965187
>gb|AC009312.4| Homo sapiens BAC clone RP11-425F6 from 2, complete sequence Length = 204834 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tcatttctctcttcattttc 98 |||||||||||||||||||| Sbjct: 87842 tcatttctctcttcattttc 87823
>ref|NM_001009215.1| Ovis aries bombesin receptor subtype 3 (BRS-3), mRNA Length = 1405 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 330 tggaaatgctattctcatca 349
>ref|XM_224535.3| PREDICTED: Rattus norvegicus FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) (predicted) (Farp1_predicted), mRNA Length = 5754 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 4423 cagctcccgctctatggcat 4442
>gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chromosome unknown, complete sequence Length = 209305 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tcatttctctcttcattttc 98 |||||||||||||||||||| Sbjct: 195260 tcatttctctcttcattttc 195241
>gb|AF108210.1|AF108210 Ovis aries bombesin receptor subtype 3 (BRS-3) mRNA, complete cds Length = 1405 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 330 tggaaatgctattctcatca 349
>gb|AF108207.1|OABRS3G1 Ovis aries bombesin receptor subtype 3 (BRS-3) gene, exon Length = 779 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 466 tggaaatgctattctcatca 485
>gb|AF238483.1|AF238483 Hepatitis C virus 2a polyprotein gene, complete cds Length = 9416 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gaatgtatggcagtgtgagc 398 |||||||||||||||||||| Sbjct: 8396 gaatgtatggcagtgtgagc 8377
>gb|BC041595.1| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived), transcript variant 1, mRNA (cDNA clone MGC:52223 IMAGE:5443230), complete cds Length = 3546 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 2675 cagctcccgctctatggcat 2694
>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence Length = 160193 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtcatttctctcttcatttt 97 |||||||||||||||||||| Sbjct: 134177 gtcatttctctcttcatttt 134196
>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence Length = 178741 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtcatttctctcttcatttt 97 |||||||||||||||||||| Sbjct: 163601 gtcatttctctcttcatttt 163620
>emb|X67126.1|CPBOMBLR C.porcellus mRNA for bombesin-like receptor Length = 2930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 517 tggaaatgctattctcatca 536
>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete sequence Length = 221351 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtcatttctctcttcatttt 97 |||||||||||||||||||| Sbjct: 75926 gtcatttctctcttcatttt 75945
>dbj|D25536.1|HROSEC61P Halocynthia roretzi mRNA for HRSec61, complete cds Length = 2057 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 201 atggagctgggtattaccccaattgtgacatc 232 ||||| || |||||||| |||||||||||||| Sbjct: 279 atggaacttggtattactccaattgtgacatc 310
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tgggtatcctgattgccatt 350 |||||||||||||||||||| Sbjct: 26891815 tgggtatcctgattgccatt 26891834
>ref|XM_671343.1| Plasmodium berghei strain ANKA Pfsec61 (PB000121.02.0), partial mRNA Length = 1416 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 149 tgatcctttctactggatgcgtgttattcttgcatcaaac 188 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 171 tgatccgttttattggatgcgtgttattttagcatcaaac 210
>emb|X76498.1|HSUBR H.sapiens gene for uterine bombesin receptor Length = 3321 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 1343 tggaaatgctattctcatca 1362
>gb|L08893.1|HUMBOMB3S Human bombesin receptor subtype-3 mRNA, complete cds Length = 1413 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tggaaatgctattctcatca 429 |||||||||||||||||||| Sbjct: 338 tggaaatgctattctcatca 357
>dbj|AB008430.1| Homo sapiens mRNA for CDEP, complete cds Length = 3442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cagctcccgctctatggcat 130 |||||||||||||||||||| Sbjct: 2458 cagctcccgctctatggcat 2477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,391,751 Number of Sequences: 3902068 Number of extensions: 5391751 Number of successful extensions: 105283 Number of sequences better than 10.0: 223 Number of HSP's better than 10.0 without gapping: 221 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 104669 Number of HSP's gapped (non-prelim): 588 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
