ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags34m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 190 4e-45
2gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 190 4e-45
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
4dbj|AK058992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
5gb|AY106592.1| Zea mays PCO063726 mRNA sequence 82 3e-12
6gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cance... 46 0.14
7gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome 44 0.55
8dbj|AK047629.1| Mus musculus adult male corpus striatum cDNA, RI... 44 0.55
9gb|AC113964.18| Mus musculus chromosome 16, clone RP23-31O16, co... 44 0.55
10gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, comp... 42 2.2
11gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chrom... 42 2.2
12gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, comp... 42 2.2
13gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromo... 42 2.2
14gb|AC127517.2| Homo sapiens chromosome 8, clone RP13-830M24, com... 42 2.2
15gb|AC105242.4| Homo sapiens chromosome 8, clone CTD-2386G14, com... 42 2.2
16gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete ... 42 2.2
17gb|AC137733.5| Homo sapiens chromosome 8, clone CTD-3061M5, comp... 42 2.2
18dbj|AP006276.1| Homo sapiens genomic DNA, chromosome 8q13.3, clo... 42 2.2
19ref|NM_001036229.1| Arabidopsis thaliana heat shock protein bind... 40 8.6
20ref|NM_106643.2| Arabidopsis thaliana heat shock protein binding... 40 8.6
21gb|AC005736.1| Homo sapiens chromosome 16, BAC clone 462G18 (LAN... 40 8.6
22gb|AC004647.1| Homo sapiens chromosome 16, cosmid clone 443G8 (L... 40 8.6
23gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
24gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom... 40 8.6
25gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 8.6
26ref|NM_021431.2| Mus musculus nudix (nucleoside diphosphate link... 40 8.6
27gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, co... 40 8.6
28gb|AY152853.1| Mus musculus diphosphoinositol polyphosphate phos... 40 8.6
29gb|AC009171.6| Homo sapiens chromosome 16 clone RP11-95P2, compl... 40 8.6
30emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chro... 40 8.6
31emb|CR749434.1| Homo sapiens mRNA; cDNA DKFZp781F1053 (from clon... 40 8.6
32dbj|AK036077.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.6
33emb|BX465866.13| Mouse DNA sequence from clone RP23-128L16 on ch... 40 8.6
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
35gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 40 8.6
36gb|AC087370.26| Homo sapiens chromosome 8, clone RP11-533K17, co... 40 8.6
37gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.6
38gb|AC117709.16| Mus musculus chromosome 8, clone RP23-475N7, com... 40 8.6
39gb|BC071274.1| Mus musculus nudix (nucleoside diphosphate linked... 40 8.6
40emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in... 40 8.6
41gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 40 8.6
42dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.6
43gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, comp... 40 8.6
44gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
45dbj|AB041576.1| Mus musculus brain cDNA, clone MNCb-1696 40 8.6
46dbj|AP004582.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.6 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  190 bits (96), Expect = 4e-45
 Identities = 148/164 (90%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                           
Query: 4       cggatcccg-aagatgctactctggaagcatactgtgatgaatcaggaacaggcctagag 62
               ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 9376696 cggatcccggaagatgctactttagaagcatactgtgatgaatcaggaacaggcctagag 9376755

                                                                           
Query: 63      attattgtccctaaacaccgtgctggacctgaagaacatgaagtccatgtgtccctgagg 122
               |||||||| || ||| |||||| ||| ||||||||||||||||| ||||||||| |||||
Sbjct: 9376756 attattgttccaaaataccgtgttggtcctgaagaacatgaagttcatgtgtccatgagg 9376815

                                                           
Query: 123     cctccctcgtcatggtgccaatgaaaacatgttgaaggtgtgtg 166
               || ||||||||||||||||| |   |||||||| ||||||||||
Sbjct: 9376816 cccccctcgtcatggtgccagtcttaacatgttcaaggtgtgtg 9376859



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 368     ttgtagggacatgctacaggccacaaggaacatatctggatta 410
               |||||||  |||||||||   ||||||||||||||||||||||
Sbjct: 9377062 ttgtaggaccatgctacatatcacaaggaacatatctggatta 9377104



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 606     ttgtgggcattcttggaaatttcatc 631
               ||||| ||||||||||||||||||||
Sbjct: 9377307 ttgtgagcattcttggaaatttcatc 9377332



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 131     gtcatggtgccaatgaaaacatgt 154
               ||||||||| ||||||||||||||
Sbjct: 9318246 gtcatggtggcaatgaaaacatgt 9318223
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score =  190 bits (96), Expect = 4e-45
 Identities = 148/164 (90%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     cggatcccg-aagatgctactctggaagcatactgtgatgaatcaggaacaggcctagag 62
             ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 74096 cggatcccggaagatgctactttagaagcatactgtgatgaatcaggaacaggcctagag 74155

                                                                         
Query: 63    attattgtccctaaacaccgtgctggacctgaagaacatgaagtccatgtgtccctgagg 122
             |||||||| || ||| |||||| ||| ||||||||||||||||| ||||||||| |||||
Sbjct: 74156 attattgttccaaaataccgtgttggtcctgaagaacatgaagttcatgtgtccatgagg 74215

                                                         
Query: 123   cctccctcgtcatggtgccaatgaaaacatgttgaaggtgtgtg 166
             || ||||||||||||||||| |   |||||||| ||||||||||
Sbjct: 74216 cccccctcgtcatggtgccagtcttaacatgttcaaggtgtgtg 74259



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 368   ttgtagggacatgctacaggccacaaggaacatatctggatta 410
             |||||||  |||||||||   ||||||||||||||||||||||
Sbjct: 74462 ttgtaggaccatgctacatatcacaaggaacatatctggatta 74504



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 606   ttgtgggcattcttggaaatttcatc 631
             ||||| ||||||||||||||||||||
Sbjct: 74707 ttgtgagcattcttggaaatttcatc 74732



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   gtcatggtgccaatgaaaacatgt 154
             ||||||||| ||||||||||||||
Sbjct: 15646 gtcatggtggcaatgaaaacatgt 15623
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  190 bits (96), Expect = 4e-45
 Identities = 148/164 (90%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                           
Query: 4       cggatcccg-aagatgctactctggaagcatactgtgatgaatcaggaacaggcctagag 62
               ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 9374817 cggatcccggaagatgctactttagaagcatactgtgatgaatcaggaacaggcctagag 9374876

                                                                           
Query: 63      attattgtccctaaacaccgtgctggacctgaagaacatgaagtccatgtgtccctgagg 122
               |||||||| || ||| |||||| ||| ||||||||||||||||| ||||||||| |||||
Sbjct: 9374877 attattgttccaaaataccgtgttggtcctgaagaacatgaagttcatgtgtccatgagg 9374936

                                                           
Query: 123     cctccctcgtcatggtgccaatgaaaacatgttgaaggtgtgtg 166
               || ||||||||||||||||| |   |||||||| ||||||||||
Sbjct: 9374937 cccccctcgtcatggtgccagtcttaacatgttcaaggtgtgtg 9374980



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 368     ttgtagggacatgctacaggccacaaggaacatatctggatta 410
               |||||||  |||||||||   ||||||||||||||||||||||
Sbjct: 9375183 ttgtaggaccatgctacatatcacaaggaacatatctggatta 9375225



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 606     ttgtgggcattcttggaaatttcatc 631
               ||||| ||||||||||||||||||||
Sbjct: 9375428 ttgtgagcattcttggaaatttcatc 9375453



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 131     gtcatggtgccaatgaaaacatgt 154
               ||||||||| ||||||||||||||
Sbjct: 9316079 gtcatggtggcaatgaaaacatgt 9316056
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>dbj|AK058992.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F09, full
           insert sequence
          Length = 1002

 Score =  190 bits (96), Expect = 4e-45
 Identities = 148/164 (90%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   cggatcccg-aagatgctactctggaagcatactgtgatgaatcaggaacaggcctagag 62
           ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 584 cggatcccggaagatgctactttagaagcatactgtgatgaatcaggaacaggcctagag 643

                                                                       
Query: 63  attattgtccctaaacaccgtgctggacctgaagaacatgaagtccatgtgtccctgagg 122
           |||||||| || ||| |||||| ||| ||||||||||||||||| ||||||||| |||||
Sbjct: 644 attattgttccaaaataccgtgttggtcctgaagaacatgaagttcatgtgtccatgagg 703

                                                       
Query: 123 cctccctcgtcatggtgccaatgaaaacatgttgaaggtgtgtg 166
           || ||||||||||||||||| |   |||||||| ||||||||||
Sbjct: 704 cccccctcgtcatggtgccagtcttaacatgttcaaggtgtgtg 747



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 368 ttgtagggacatgctacaggccacaaggaacatatctggatta 410
           |||||||  |||||||||   ||||||||||||||||||||||
Sbjct: 950 ttgtaggaccatgctacatatcacaaggaacatatctggatta 992
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>gb|AY106592.1| Zea mays PCO063726 mRNA sequence
          Length = 752

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                       
Query: 40  atgaatcaggaacaggcctagagattattgtccctaaacaccgtgctggacctgaagaac 99
           ||||| |||| ||||| || |||||||||||||| ||   ||| | ||| ||||||| ||
Sbjct: 17  atgaaacagggacagggctggagattattgtcccgaagttccgcgttggccctgaagcac 76

                                                            
Query: 100 atgaagtccatgtgtccctgaggcctccctcgtcatggtgccaatgaaa 148
           | ||||| ||||||||| ||||||| |||||||| ||||||||||||||
Sbjct: 77  acgaagtgcatgtgtccatgaggccaccctcgtcctggtgccaatgaaa 125



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 277 acaacaaatgcagctcagttttgctaatt 305
           |||||||||||||||||||||||||||||
Sbjct: 196 acaacaaatgcagctcagttttgctaatt 224
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>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160421

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 194   tccattattgtcagctgctcttg 216
             |||||||||||||||||||||||
Sbjct: 40229 tccattattgtcagctgctcttg 40207
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>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome
          Length = 1471282

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 498    aaggtttgtagccagcctgctcaata 523
              |||||||||||||||||| |||||||
Sbjct: 718280 aaggtttgtagccagccttctcaata 718305
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>dbj|AK047629.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030003K05
           product:unclassifiable, full insert sequence
          Length = 2095

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 167 atagatgttcatgtagtagtta 188
           ||||||||||||||||||||||
Sbjct: 318 atagatgttcatgtagtagtta 297
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>gb|AC113964.18| Mus musculus chromosome 16, clone RP23-31O16, complete sequence
          Length = 213851

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 167   atagatgttcatgtagtagtta 188
             ||||||||||||||||||||||
Sbjct: 67090 atagatgttcatgtagtagtta 67069
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>gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, complete sequence
          Length = 190776

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   aaggtgtgtgatagatgttca 177
             |||||||||||||||||||||
Sbjct: 24322 aaggtgtgtgatagatgttca 24342
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>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete
            sequence
          Length = 166684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 157  aaggtgtgtgatagatgttca 177
            |||||||||||||||||||||
Sbjct: 9308 aaggtgtgtgatagatgttca 9288
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>gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, complete sequence
          Length = 130280

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   aaggtgtgtgatagatgttca 177
             |||||||||||||||||||||
Sbjct: 37061 aaggtgtgtgatagatgttca 37081
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>gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromosome 7, complete
             sequence
          Length = 160056

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   aaggtgtgtgatagatgttca 177
             |||||||||||||||||||||
Sbjct: 48113 aaggtgtgtgatagatgttca 48133
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>gb|AC127517.2| Homo sapiens chromosome 8, clone RP13-830M24, complete sequence
          Length = 29823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 116  cctgaggcctccctcgtcatg 136
            |||||||||||||||||||||
Sbjct: 7407 cctgaggcctccctcgtcatg 7387
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>gb|AC105242.4| Homo sapiens chromosome 8, clone CTD-2386G14, complete sequence
          Length = 112928

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    cctgaggcctccctcgtcatg 136
              |||||||||||||||||||||
Sbjct: 106615 cctgaggcctccctcgtcatg 106635
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>gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete sequence
          Length = 157183

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   cagctgtggaattgtagggac 377
             |||||||||||||||||||||
Sbjct: 77499 cagctgtggaattgtagggac 77479
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>gb|AC137733.5| Homo sapiens chromosome 8, clone CTD-3061M5, complete sequence
          Length = 28150

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  cctgaggcctccctcgtcatg 136
            |||||||||||||||||||||
Sbjct: 6610 cctgaggcctccctcgtcatg 6630
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>dbj|AP006276.1| Homo sapiens genomic DNA, chromosome 8q13.3, clone: KB1315B7, complete
              sequence
          Length = 147415

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 116    cctgaggcctccctcgtcatg 136
              |||||||||||||||||||||
Sbjct: 131096 cctgaggcctccctcgtcatg 131116
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>ref|NM_001036229.1| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT1G79940 transcript variant AT1G79940.2 mRNA,
           complete cds
          Length = 2308

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tggacctgaagaacatgaag 105
           ||||||||||||||||||||
Sbjct: 939 tggacctgaagaacatgaag 958
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>ref|NM_106643.2| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT1G79940 transcript variant AT1G79940.1 mRNA,
           complete cds
          Length = 2311

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tggacctgaagaacatgaag 105
           ||||||||||||||||||||
Sbjct: 942 tggacctgaagaacatgaag 961
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>gb|AC005736.1| Homo sapiens chromosome 16, BAC clone 462G18 (LANL), complete
            sequence
          Length = 215441

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 91   ctgaagaacatgaagtccatgtgtccct 118
            |||||| ||||||||||||| |||||||
Sbjct: 1975 ctgaagcacatgaagtccatctgtccct 1948
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>gb|AC004647.1| Homo sapiens chromosome 16, cosmid clone 443G8 (LANL), complete
             sequence
          Length = 36700

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 91    ctgaagaacatgaagtccatgtgtccct 118
             |||||| ||||||||||||| |||||||
Sbjct: 19577 ctgaagcacatgaagtccatctgtccct 19550
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>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032M21 map C83B, complete sequence
          Length = 48636

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   atacattgtgtattatcttt 466
             ||||||||||||||||||||
Sbjct: 15300 atacattgtgtattatcttt 15319
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>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10
              map R2918, complete sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    atacattgtgtattatcttt 466
              ||||||||||||||||||||
Sbjct: 132957 atacattgtgtattatcttt 132976
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      tgtgatgaatcaggaacagg 55
               ||||||||||||||||||||
Sbjct: 1010811 tgtgatgaatcaggaacagg 1010792
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>ref|NM_021431.2| Mus musculus nudix (nucleoside diphosphate linked moiety X)-type
            motif 11 (Nudt11), mRNA
          Length = 2649

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  tgttgaaggtgtgtgatagatgtt 175
            |||||||| |||||||||||||||
Sbjct: 2530 tgttgaagctgtgtgatagatgtt 2553
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>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence
          Length = 195598

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tgctggacctgaagaacatg 102
             ||||||||||||||||||||
Sbjct: 14859 tgctggacctgaagaacatg 14878
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>gb|AY152853.1| Mus musculus diphosphoinositol polyphosphate phosphohydrolase type 3
            (Nudt11) mRNA, complete cds
          Length = 2390

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  tgttgaaggtgtgtgatagatgtt 175
            |||||||| |||||||||||||||
Sbjct: 2275 tgttgaagctgtgtgatagatgtt 2298
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>gb|AC009171.6| Homo sapiens chromosome 16 clone RP11-95P2, complete sequence
          Length = 175022

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 91    ctgaagaacatgaagtccatgtgtccct 118
             |||||| ||||||||||||| |||||||
Sbjct: 15249 ctgaagcacatgaagtccatctgtccct 15276
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>emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chromosome 4, complete
             sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   tctgctagttggaagttggcagct 361
             ||||||||||| ||||||||||||
Sbjct: 27069 tctgctagttgtaagttggcagct 27046
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>emb|CR749434.1| Homo sapiens mRNA; cDNA DKFZp781F1053 (from clone DKFZp781F1053)
          Length = 5011

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  atgaaaacatgttgaaggtg 162
            ||||||||||||||||||||
Sbjct: 1189 atgaaaacatgttgaaggtg 1170
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>dbj|AK036077.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630032L23 product:nudix
            (nucleoside diphosphate linked moiety X)-type motif 10,
            full insert sequence
          Length = 2067

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  tgttgaaggtgtgtgatagatgtt 175
            |||||||| |||||||||||||||
Sbjct: 1861 tgttgaagctgtgtgatagatgtt 1884
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>emb|BX465866.13| Mouse DNA sequence from clone RP23-128L16 on chromosome X, complete
             sequence
          Length = 62496

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   tgttgaaggtgtgtgatagatgtt 175
             |||||||| |||||||||||||||
Sbjct: 38890 tgttgaagctgtgtgatagatgtt 38913
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 447     atacattgtgtattatcttt 466
               ||||||||||||||||||||
Sbjct: 2480860 atacattgtgtattatcttt 2480879
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>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tggacctgaagaacatgaag 105
             ||||||||||||||||||||
Sbjct: 32840 tggacctgaagaacatgaag 32821
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>gb|AC087370.26| Homo sapiens chromosome 8, clone RP11-533K17, complete sequence
          Length = 53432

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   atgaaaacatgttgaaggtg 162
             ||||||||||||||||||||
Sbjct: 14659 atgaaaacatgttgaaggtg 14678
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>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   gtcatggtgccaatgaaaacatgt 154
             ||||||||| ||||||||||||||
Sbjct: 38007 gtcatggtggcaatgaaaacatgt 38030
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>gb|AC117709.16| Mus musculus chromosome 8, clone RP23-475N7, complete sequence
          Length = 187186

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 529   ccatctgtgcaatactctgg 548
             ||||||||||||||||||||
Sbjct: 53973 ccatctgtgcaatactctgg 53954
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>gb|BC071274.1| Mus musculus nudix (nucleoside diphosphate linked moiety X)-type
            motif 11, mRNA (cDNA clone MGC:78376 IMAGE:6331160),
            complete cds
          Length = 2453

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  tgttgaaggtgtgtgatagatgtt 175
            |||||||| |||||||||||||||
Sbjct: 2334 tgttgaagctgtgtgatagatgtt 2357
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>emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in linkage group 12,
             complete sequence
          Length = 140422

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   ggaatacattgtgtattatc 463
             ||||||||||||||||||||
Sbjct: 94370 ggaatacattgtgtattatc 94351
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>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence,
            complete sequence
          Length = 116905

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   tggacctgaagaacatgaag 105
            ||||||||||||||||||||
Sbjct: 8104 tggacctgaagaacatgaag 8123
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>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10
          Length = 155723

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    atgaaaacatgttgaaggtg 162
              ||||||||||||||||||||
Sbjct: 152072 atgaaaacatgttgaaggtg 152091
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>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence
          Length = 171278

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tgctggacctgaagaacatg 102
              ||||||||||||||||||||
Sbjct: 126522 tgctggacctgaagaacatg 126541
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 447     atacattgtgtattatcttt 466
               ||||||||||||||||||||
Sbjct: 2489934 atacattgtgtattatcttt 2489953
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>dbj|AB041576.1| Mus musculus brain cDNA, clone MNCb-1696
          Length = 2399

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  tgttgaaggtgtgtgatagatgtt 175
            |||||||| |||||||||||||||
Sbjct: 2275 tgttgaagctgtgtgatagatgtt 2298
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>dbj|AP004582.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB925E9
          Length = 93034

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   atgaaaacatgttgaaggtg 162
             ||||||||||||||||||||
Sbjct: 45685 atgaaaacatgttgaaggtg 45666


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,309,279
Number of Sequences: 3902068
Number of extensions: 5309279
Number of successful extensions: 101622
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101377
Number of HSP's gapped (non-prelim): 244
length of query: 631
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 608
effective length of database: 17,143,297,704
effective search space: 10423125004032
effective search space used: 10423125004032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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