| Clone Name | bags35a22 |
|---|---|
| Clone Library Name | barley_pub |
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/72 (37%), Positives = 44/72 (61%) Frame = +1 Query: 7 QFKYVTWQLQAALTNLPHNCFQISDEVQEEVDLVRGQLKREMEKKGALDLNIFSKIHDIL 186 +F+ V QL+ AL ++P+N ISDEV+E+V+LV QLKR E+ +D+ +D+L Sbjct: 122 KFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKER---IDMPDDEFYNDLL 178 Query: 187 AHHVDNVGSQSE 222 + + N +E Sbjct: 179 SVYDKNYDPSAE 190
>GRPE_ACHLA (Q8L399) Protein grpE (HSP-70 cofactor)| Length = 190 Score = 31.2 bits (69), Expect = 1.2 Identities = 11/43 (25%), Positives = 22/43 (51%) Frame = +1 Query: 103 LVRGQLKREMEKKGALDLNIFSKIHDILAHHVDNVGSQSEEPN 231 ++R Q K +E +G +++ ++ D HH S ++PN Sbjct: 112 MIRDQFKSVLENEGVVEIKALGEVFDAKVHHAIEKESNKDKPN 154
>ZBT11_HUMAN (O95625) Zinc finger and BTB domain-containing protein 11| Length = 1053 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/87 (25%), Positives = 42/87 (48%) Frame = +1 Query: 19 VTWQLQAALTNLPHNCFQISDEVQEEVDLVRGQLKREMEKKGALDLNIFSKIHDILAHHV 198 V+ + ++AL+++ C S E VDL+ + E+E + N S IH L+ Sbjct: 388 VSSEAESALSSV--GCIADSHPEMESVDLITKNNQTELETSNNRENNTVSNIHPKLSK-- 443 Query: 199 DNVGSQSEEPNSQPETLPLENVSSDHL 279 +NV S S E + + E++ ++ + Sbjct: 444 ENVISSSPEDSGMGNDISAEDICAEDI 470
>EFTU_WIGBR (Q8D240) Elongation factor Tu (EF-Tu)| Length = 394 Score = 30.0 bits (66), Expect = 2.6 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = +1 Query: 91 EEVDLVRGQLKREMEKKGALDLNIFSKIHDILAHHVDNVGSQSEEPNSQPETLPLENVSS 270 +E+ ++RG + +EK D KI D L+ H+DN + + QP LP+E+V S Sbjct: 166 DEIPIIRGSALKALEK----DPIWIQKIID-LSEHLDNYIPEPKRIIDQPFLLPIEDVFS 220
>HEMA_IAPUE (P03452) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 566 Score = 29.3 bits (64), Expect = 4.4 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -1 Query: 248 NVSGWLFGSSDCDPTL 201 N++GWL G+ +CDP L Sbjct: 73 NIAGWLLGNPECDPLL 88
>EFTU_CHLPN (Q9Z9A7) Elongation factor Tu (EF-Tu)| Length = 393 Score = 29.3 bits (64), Expect = 4.4 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 15/81 (18%) Frame = +1 Query: 73 ISDEVQEEVDLVRGQLKREMEKKG----------AL-----DLNIFSKIHDILAHHVDNV 207 IS E E +DLV +L +E+KG AL D N K+ +++ DN+ Sbjct: 140 ISQEDAELIDLVEMELSELLEEKGYKGCPIIRGSALKALEGDANYIEKVRELMQAVDDNI 199 Query: 208 GSQSEEPNSQPETLPLENVSS 270 + E + +P +P+E+V S Sbjct: 200 PTPEREID-KPFLMPIEDVFS 219
>MIS6_SCHPO (P87227) Inner centromere protein mis6| Length = 672 Score = 28.9 bits (63), Expect = 5.8 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 226 VLQIVTRHYQHDELRYHEFLKKYLDQGHPSSPFL 125 +L ++T+HY R H+ L Y G+ + P+L Sbjct: 153 LLVLLTKHYHVKSFRIHQLLALYQKPGNTADPYL 186
>EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts)| Length = 287 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 112 GQLKREMEKKGALDLNIFSKIHDILAHHVDNVGS 213 G+L ++ KGALD + + I+DI+A +N+GS Sbjct: 95 GKLAEQVATKGALDESAQTAINDIIATLGENMGS 128
>JHD1_CAEEL (Q95Q98) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1076 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 79 DEVQEEVDLVRGQLKREMEK-KGALDLNIFSKIHDILAHHVDNVGSQSEEPNSQPE 243 D E + L GQLK K K ++L+I ++ I GSQS E + +PE Sbjct: 755 DPRMEMMKLGTGQLKSAYRKTKNNVELHIEKNLYKIEPKRGSEEGSQSREQSMEPE 810
>EFTU_CHLCV (Q822I4) Elongation factor Tu (EF-Tu)| Length = 393 Score = 28.1 bits (61), Expect = 9.9 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 15/81 (18%) Frame = +1 Query: 73 ISDEVQEEVDLVRGQLKREMEKKG----------AL-----DLNIFSKIHDILAHHVDNV 207 IS E E VDLV +L +E+KG AL D + KI +++ DN+ Sbjct: 140 ISQEDAELVDLVEMELSELLEEKGYKGCPIIRGSALKALEGDASYVEKIRELMQAVDDNI 199 Query: 208 GSQSEEPNSQPETLPLENVSS 270 + E + +P +P+E+V S Sbjct: 200 PTPEREVD-KPFLMPIEDVFS 219 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.129 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,910,275 Number of Sequences: 219361 Number of extensions: 945373 Number of successful extensions: 2017 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1974 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2017 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)