| Clone Name | bags34i07 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 286 bits (731), Expect = 3e-77 Identities = 139/169 (82%), Positives = 146/169 (86%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P T ENYRLLYDTKGRFRLH +RDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP Sbjct: 93 PKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 152 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVED 386 LIKANDTIK+DLETNKIVDFIKFD IKNREKHKG+FETIHVED Sbjct: 153 LIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVED 212 Query: 387 AQGHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 + GHQFATR+GNVFTIGKG KPW+SLPKGKGIKL+IIEEQRKRDAAAQA Sbjct: 213 SLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQA 261
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 277 bits (708), Expect = 2e-74 Identities = 133/168 (79%), Positives = 144/168 (85%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P T EN+RLLYDTKGRFRLHS+RDE++KFKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP Sbjct: 89 PKTNENFRLLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP 148 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVED 386 LIKANDTIKLDLETNKI DFIKFD IKNREKHKG+FETIHV+D Sbjct: 149 LIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQD 208 Query: 387 AQGHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQ 530 A GH+FATRLGNVFTIGKGTKPW+SLPKGKGIKLTI+EE +KR AAAQ Sbjct: 209 ATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKRQAAAQ 256
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 273 bits (698), Expect = 2e-73 Identities = 131/169 (77%), Positives = 145/169 (85%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P T EN+RLLYDTKGRFRLHS+RDE++KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP Sbjct: 93 PKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 152 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVED 386 LIKANDTIKLDLE+NKIVDFIKFD IKNREKHKG+FET+H++D Sbjct: 153 LIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQD 212 Query: 387 AQGHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 +QGH+FATRLGNVFT+GKGTKPW+SLPKGKGIKLTIIE+ RKR AA A Sbjct: 213 SQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKRLAAQSA 261
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 269 bits (688), Expect = 3e-72 Identities = 129/169 (76%), Positives = 143/169 (84%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P T EN+RLLYDTKGRFRLHS++DE+AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDP Sbjct: 93 PKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDP 152 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVED 386 LIK NDTIKLDLE NKIV+FIKFD IKNREKHKG+FETIH++D Sbjct: 153 LIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD 212 Query: 387 AQGHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 + GH+FATRLGNV+TIGKGTKPW+SLPKGKGIKLTIIEE RKR A+ QA Sbjct: 213 STGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQA 261
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 258 bits (660), Expect = 6e-69 Identities = 127/169 (75%), Positives = 139/169 (82%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P T E++RLLYDTKGRF LH++ ++ KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP Sbjct: 93 PKTNEDFRLLYDTKGRFCLHAITGDETKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 152 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVED 386 LIKANDTIKLDLE+NKIVDFIKFD IKNREKHKG+FETIHV+D Sbjct: 153 LIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQD 212 Query: 387 AQGHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 A GH+FATRLGNVFTIGKGTKPW+SLPK KGIKL+IIEE RKR AA A Sbjct: 213 AAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKRLAAQNA 261
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 215 bits (548), Expect = 5e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 215 bits (547), Expect = 7e-56 Identities = 101/167 (60%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 212 bits (540), Expect = 5e-55 Identities = 100/167 (59%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 211 bits (538), Expect = 8e-55 Identities = 100/167 (59%), Positives = 123/167 (73%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 211 bits (538), Expect = 8e-55 Identities = 100/167 (59%), Positives = 123/167 (73%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 210 bits (535), Expect = 2e-54 Identities = 97/167 (58%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YD KGRF +H + +E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DL+T KI DFIKF+ I NREKH G+F+ +HV+D+ Sbjct: 154 KVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSI 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKG++LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKRLAAKQS 260
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 209 bits (532), Expect = 4e-54 Identities = 100/166 (60%), Positives = 121/166 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR G K IP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI++DLET KI DFIKFD I NREKH G+F+ +HV+DA Sbjct: 154 KMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQ 530 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQ 259
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 209 bits (531), Expect = 5e-54 Identities = 98/167 (58%), Positives = 123/167 (73%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT++++LET KI DFIKFD I NREKH G+F+ +HV+DA Sbjct: 154 KVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 207 bits (526), Expect = 2e-53 Identities = 94/167 (56%), Positives = 124/167 (74%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YD KGRF +H + +E+AK+KLCKV+ + G KGIP+L T+D RTIRYPDP+I Sbjct: 94 TGENFRLIYDVKGRFTVHRITNEEAKYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 KANDT+++DLET KI +FIKFD I NRE+H G+F+ +HV+D+ Sbjct: 154 KANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDST 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IGKG K W+S+P+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKRLAAKQS 260
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 203 bits (516), Expect = 3e-52 Identities = 93/167 (55%), Positives = 122/167 (73%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+I Sbjct: 94 TGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI++FIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ EE+ KR A Q+ Sbjct: 214 GNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQS 260
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 202 bits (514), Expect = 5e-52 Identities = 93/167 (55%), Positives = 121/167 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+I Sbjct: 94 TGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL + KI FIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDAS 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 202 bits (514), Expect = 5e-52 Identities = 92/167 (55%), Positives = 122/167 (73%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+I Sbjct: 94 TGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI++FIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATR+ N+F IG G KPW+SLP+GKGI+LT+ EE+ KR A Q+ Sbjct: 214 GNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQS 260
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 201 bits (512), Expect = 8e-52 Identities = 93/167 (55%), Positives = 121/167 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF + + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI++FIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR A Q+ Sbjct: 214 GNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLATKQS 260
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 201 bits (510), Expect = 1e-51 Identities = 93/167 (55%), Positives = 120/167 (71%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI FIKFD + NRE+H G+ + +HV+DA Sbjct: 154 KVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 201 bits (510), Expect = 1e-51 Identities = 92/167 (55%), Positives = 121/167 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+I Sbjct: 94 TGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI++FIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ E+ KR A Q+ Sbjct: 214 GNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQS 260
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 201 bits (510), Expect = 1e-51 Identities = 92/167 (55%), Positives = 121/167 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDP+I Sbjct: 94 TGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI++FIKFD I NRE+H G+F+ +HV+DA Sbjct: 154 KVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ E+ KR A Q+ Sbjct: 214 GNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQS 260
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 199 bits (505), Expect = 5e-51 Identities = 96/163 (58%), Positives = 118/163 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YD KGRF +H + E+AK+KLCKV+ VQ G KG+P+L T+DGRTIRYPDPLI Sbjct: 95 TGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLI 154 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTIKL+LETNKI FIKFD I +RE H G+FE IHV+DA Sbjct: 155 KVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDAL 214 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R A Sbjct: 215 DREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRRA 257
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 198 bits (504), Expect = 7e-51 Identities = 91/164 (55%), Positives = 121/164 (73%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE +RL+YD KGRF +H + E+AK+KLCKV+ Q G KG+P+L T+DGRTIRYPDPLI Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 AND++++D+ + KI D+IKFD + NRE+H G+F+ +H++D+Q Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQ 214 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAA 524 GH FATRL NVF IGKG KP++SLPKGKG+KL+I EE+ KR AA Sbjct: 215 GHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAA 258
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 198 bits (503), Expect = 9e-51 Identities = 96/163 (58%), Positives = 118/163 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YD KGRF +H + E+AK+KLCKV+ VQ G KG+P+L T+DGRTIRYPDPLI Sbjct: 95 TGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLI 154 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTIKL+LETNKI FIKFD I +RE H G+FE IHV+DA Sbjct: 155 KVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDAL 214 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R A Sbjct: 215 DREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRA 257
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 198 bits (503), Expect = 9e-51 Identities = 96/163 (58%), Positives = 118/163 (72%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+YD KGRF +H + E+AK+KLCKV+ VQ G KG+P+L T+DGRTIRYPDPLI Sbjct: 95 TGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLI 154 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTIKL+LETNKI FIKFD I +RE H G+FE IHV+DA Sbjct: 155 KVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDAL 214 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R A Sbjct: 215 DREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRA 257
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 196 bits (499), Expect = 3e-50 Identities = 92/167 (55%), Positives = 119/167 (71%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGE++RL+Y+TKG F +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 94 TGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+++DL T KI FIKFD I NRE+H G+ + +HV+DA Sbjct: 154 KVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDAN 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQA 533 G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR AA Q+ Sbjct: 214 GNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 260
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 190 bits (482), Expect = 2e-48 Identities = 91/163 (55%), Positives = 116/163 (71%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YD KGRF +H + DE+A +KL KV+ VQ G+KGIPYL T+DGRTIRYPDPLI Sbjct: 95 TGENFRLVYDVKGRFAVHRITDEEAAYKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLI 154 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+K+DL T KI F+KF+ I +RE+H+G F+ +H++DA Sbjct: 155 KVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDAL 214 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 +QF TRL NVF IG+G K +SLPKGKGIKL+I EE+ R A Sbjct: 215 DNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDARRA 257
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 184 bits (467), Expect = 1e-46 Identities = 86/163 (52%), Positives = 115/163 (70%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 T EN+RL+YD KGRF +H + DE+A +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP I Sbjct: 94 TNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDT+K+DL + KI DFIKFD I ++E+H G F+ +H++D+ Sbjct: 154 KVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSL 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 + F TRL NVF IG+ KP++SLPKGKGIKL+I EE+ +R A Sbjct: 214 DNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRA 256
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 181 bits (458), Expect = 1e-45 Identities = 102/181 (56%), Positives = 117/181 (64%), Gaps = 12/181 (6%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P TGENYRLLYDTKGRFRL SV+DEDAKFKLCKVRSVQFGQKGIPYLNTY T Y Sbjct: 93 PKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYVVPTDTYMAT 152 Query: 207 LI------------KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREK 350 + ++ D +L L ++ D + + + Sbjct: 153 IATRPTSGKRHNQDRSGDQQELRLHQGLMLAMCHGDWRRNTAVWCD---------QQQGE 203 Query: 351 HKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDAAAQ 530 KG+FETIHVEDA GHQFATRLGNVFTIGKG KPW+SLPKGKGIKL+IIE ++ AAAQ Sbjct: 204 AKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEGAKEAGAAAQ 263 Query: 531 A 533 A Sbjct: 264 A 264 Score = 55.5 bits (132), Expect = 9e-08 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = +2 Query: 215 GQRHHQARPGDQQDC*LHQVXXXXXXHGDWWAQHWACWCDQEQGEA*GN 361 G+RH+Q R GDQQ+ LHQ HGD W ++ A WCDQ+QGEA G+ Sbjct: 160 GKRHNQDRSGDQQELRLHQGLMLAMCHGD-WRRNTAVWCDQQQGEAKGS 207
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 177 bits (448), Expect = 2e-44 Identities = 87/164 (53%), Positives = 114/164 (69%), Gaps = 1/164 (0%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 T E++RL YD KG+F +H + E+A +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDPLI Sbjct: 95 TNEHFRLAYDVKGKFAVHRISAEEAVYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPLI 154 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 +ANDT+K+DL T KI FIKFD I +REK +G F+ +H++DA Sbjct: 155 RANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDAL 214 Query: 393 GHQFATRLGNVFTIG-KGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 + F TRL NVF IG + KPW+SLPKGKGIKL+I EE+ +R A Sbjct: 215 ENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRXA 258
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 165 bits (417), Expect = 8e-41 Identities = 78/158 (49%), Positives = 107/158 (67%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 T EN+RLL+D KGRF L + E+AKFKL +V V+ G +GIPY++T DGRTIRYPDP I Sbjct: 94 TKENFRLLFDPKGRFTLQRITPEEAKFKLARVTRVETGNQGIPYVHTDDGRTIRYPDPAI 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 +DTIK+D+E+ KI FI F+ + +REKH G+F+ +HV D Sbjct: 154 SIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTA 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQ 506 GHQFATRL NVF IGK ++ ++SLP GKG++ + ++E+ Sbjct: 214 GHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDER 251
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 162 bits (411), Expect = 4e-40 Identities = 80/163 (49%), Positives = 106/163 (65%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 T E +R+LYDTKGR+ +H ++ +A FKLCKV+SV+ KG+P L T DGRTIRYPDP + Sbjct: 94 TNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHV 153 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDAQ 392 K NDTI ++ T KI D +KF+ I +RE+ G + IH++D+ Sbjct: 154 KVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSA 213 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPKGKGIKLTIIEEQRKRDA 521 GH FATR+ NVF IGKG K +SLP G GI+L+I EE+ KR A Sbjct: 214 GHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKRMA 256
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 149 bits (375), Expect = 6e-36 Identities = 69/119 (57%), Positives = 85/119 (71%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 TGEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLI Sbjct: 76 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 135 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDA 389 K NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 136 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 147 bits (370), Expect = 2e-35 Identities = 68/118 (57%), Positives = 84/118 (71%) Frame = +3 Query: 36 GENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIK 215 GEN+RL+YDTKGRF +H + E+AK+KLCKVR + G KGIP+L T+D RTIRYPDPLIK Sbjct: 77 GENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIK 136 Query: 216 ANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVEDA 389 NDTI++DLET KI DFIKFD I NRE+H G+F+ +HV+DA Sbjct: 137 VNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>RS4E_METTH (O26123) 30S ribosomal protein S4e| Length = 242 Score = 68.2 bits (165), Expect = 1e-11 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P TG+ YR+L D +GR LH + +E+A FKLCK+ + + G LN +DGR D Sbjct: 94 PRTGDVYRVLPDERGRLVLHPIDEENAGFKLCKIVNKTTIKGGRTQLNLHDGRNY-LSDD 152 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTF-ETIHVE 383 + D +KL + +I++ I F+ IK + + T +E Sbjct: 153 EFRVGDVVKLSIPEQEILERIPFEKDSLGLVTGGRHTGEIGKIKKINITRSSMPNTAVIE 212 Query: 384 DAQGHQFATRLGNVFTIGKGTKPWLSLPKGK 476 G F T VF IGK + +SLP GK Sbjct: 213 TGAGKTFLTLKDYVFVIGK-DESVISLPGGK 242
>RS4E_AERPE (Q9YF85) 30S ribosomal protein S4e| Length = 253 Score = 58.2 bits (139), Expect = 1e-08 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 9/156 (5%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTI--RYPDP 206 TGE +R+L F+LH + +E+ K ++ + + G LN +DGR I R DP Sbjct: 96 TGEKFRMLPYPVKFFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDP 155 Query: 207 ------LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFE 368 + + DT+ + + +I IKF +K+ +K G Sbjct: 156 RNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKR 215 Query: 369 T-IHVEDAQGHQFATRLGNVFTIGKGTKPWLSLPKG 473 T + +EDA G+ F T L VF IG +P +SLP+G Sbjct: 216 TLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250
>RS4E_METJA (P54039) 30S ribosomal protein S4e| Length = 244 Score = 55.8 bits (133), Expect = 7e-08 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 8/145 (5%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGR--TIRYP 200 P ENYR+L+D KGR +L + D KLCK+++ + G LN +DGR I+ Sbjct: 94 PDANENYRVLFDRKGRIKLKPTENPDV--KLCKIKNKTVIKGGHIQLNLHDGRNIVIKVS 151 Query: 201 DP------LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGT 362 DP + K DT+ + + +I I F+ I E+ Sbjct: 152 DPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIY 211 Query: 363 FETIHVEDAQGHQFATRLGNVFTIG 437 + + +E+ G +F T VF +G Sbjct: 212 PDIVTLENMDGEKFKTVKDYVFVVG 236
>RS4_CHLS6 (Q40941) 40S ribosomal protein S4| Length = 242 Score = 52.4 bits (124), Expect = 8e-07 Identities = 33/147 (22%), Positives = 60/147 (40%) Frame = +3 Query: 24 FPXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPD 203 FP ++YR+L G+ ++ + + K+CKV + + T D R ++ Sbjct: 92 FPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINY 151 Query: 204 PLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVE 383 IK D++ + ++IV +KF+ IK K K + IH+E Sbjct: 152 AKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLE 211 Query: 384 DAQGHQFATRLGNVFTIGKGTKPWLSL 464 G + + ++ IG+ LSL Sbjct: 212 KIDGKKLTKKCSDLLVIGESKTSILSL 238
>RS4E_METKA (Q8TW18) 30S ribosomal protein S4e| Length = 260 Score = 52.0 bits (123), Expect = 1e-06 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRT--IRYP 200 P TG+ YR++ + R + + +E+A+ K+C++++ + + G + +DG+ + Sbjct: 97 PRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVRGGNLQITMHDGKNWLVEIE 156 Query: 201 DP------LIKANDTIKLDL------ETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNR 344 DP + D++ L+L E+ K+VD I F+ + Sbjct: 157 DPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEGVWVYAMTGRHSGEVGRVVEI 216 Query: 345 EKHKGTFE-TIHVEDAQGHQFATRLGNVFTIGK 440 + +G E I VE+ +G QF T G + IGK Sbjct: 217 QTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
>RS4E_PYRHO (O59430) 30S ribosomal protein S4e| Length = 243 Score = 50.8 bits (120), Expect = 2e-06 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 6/153 (3%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P TGE+YR+L + G+ LH + +E+A K ++R+ + + LN +DG + P Sbjct: 94 PETGEHYRVLPNRIGKLVLHPISEEEANIKPLRIRNKRMVKGAKVQLNFHDG--TNHLIP 151 Query: 207 LIKAND-----TIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKH-KGTFE 368 L + ++ T+ + + +I++ + F+ I +K G + Sbjct: 152 LTEKDNYFTSYTVLMKVPEREIMEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPD 211 Query: 369 TIHVEDAQGHQFATRLGNVFTIGKGTKPWLSLP 467 + +ED +G F T F +GK KP +SLP Sbjct: 212 VVTIEDEEGELFDTLKEYAFVVGK-DKPKISLP 243
>RS4E_PYRKO (Q5JJG0) 30S ribosomal protein S4e| Length = 243 Score = 50.4 bits (119), Expect = 3e-06 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 5/152 (3%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGR----TIR 194 P TGE+YR+L + G+ LH + +E+AK K ++ + + + LN +DG ++ Sbjct: 94 PETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGAKVQLNLHDGSNHLVSLA 153 Query: 195 YPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXI-KNREKHKGTFET 371 D K + T+ + + +IV + F+ I + R+ G + Sbjct: 154 EKD-AYKTSYTVIMQVPERQIVKVLPFEVGAYVFVTQGKNVARKGKIVEVRQFPMGWPDV 212 Query: 372 IHVEDAQGHQFATRLGNVFTIGKGTKPWLSLP 467 + +ED G F T F IGK KP +SLP Sbjct: 213 VTIEDENGELFDTLKEYAFVIGK-DKPEISLP 243
>RS4E_ARCFU (O28366) 30S ribosomal protein S4e| Length = 235 Score = 49.7 bits (117), Expect = 5e-06 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 2/148 (1%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P ++YR+L+D KGR+ V EDA KL K+ + + G LN +DG I + Sbjct: 89 PKLEKSYRILFDEKGRYIPKEV--EDADLKLYKITNKTLVRGGKVQLNLFDGTNILGSND 146 Query: 207 LIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFETIHVED 386 K D+I L + ++VD +KF+ IK+ + + + + + Sbjct: 147 -YKTKDSILLRIPEKEVVDHLKFEEGALVMITGGTHAGEIGRIKSYKIVRSSAPNLVTVE 205 Query: 387 AQGHQFATRLGNVFTIGK--GTKPWLSL 464 + T VF +GK KP + L Sbjct: 206 GEERDITTIEDYVFVVGKKDSDKPVIDL 233
>RS4E_PYRAB (Q9V1U8) 30S ribosomal protein S4e| Length = 243 Score = 48.9 bits (115), Expect = 9e-06 Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 6/153 (3%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P TGE+YR+L + G+ LH + +E+A K ++R+ + + LN +DG + P Sbjct: 94 PETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDG--TNHLIP 151 Query: 207 LIKAND-----TIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKH-KGTFE 368 L + ++ T+ + + +I++ + F+ I +K G + Sbjct: 152 LSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFPMGWPD 211 Query: 369 TIHVEDAQGHQFATRLGNVFTIGKGTKPWLSLP 467 + +ED +G F T F +G+ KP +SLP Sbjct: 212 VVTIEDEEGELFDTLKEYAFVVGR-DKPRISLP 243
>RS4E_THEAC (Q56230) 30S ribosomal protein S4e| Length = 235 Score = 48.1 bits (113), Expect = 1e-05 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 1/146 (0%) Frame = +3 Query: 36 GENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIK 215 GE+YR++Y+ +G L E A KL KVRS L T+DGRT D K Sbjct: 90 GESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKK 149 Query: 216 ANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKG-TFETIHVEDAQ 392 D + + KI + IK I E +G + +H ++ Sbjct: 150 VGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSANLVHFQEG- 208 Query: 393 GHQFATRLGNVFTIGKGTKPWLSLPK 470 F+T +VF IG ++ P+ Sbjct: 209 ---FSTIKDHVFMIGSSKFSFVLSPE 231
>RS4E_METVA (P14023) 30S ribosomal protein S4e| Length = 244 Score = 47.8 bits (112), Expect = 2e-05 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 8/146 (5%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGR------- 185 P ENY +L+D GR L + E KLCK+ + + G LN +DGR Sbjct: 94 PELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVA 151 Query: 186 -TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGT 362 ++ + + K D++ + L +V ++F+ + EK Sbjct: 152 NALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLY 211 Query: 363 FETIHVEDAQGHQFATRLGNVFTIGK 440 + + +E+ G +F T VF +G+ Sbjct: 212 SDIVTLENKDGEKFKTIKPYVFIVGQ 237
>RS4E_HALSA (Q9HPC2) 30S ribosomal protein S4e| Length = 233 Score = 43.5 bits (101), Expect = 4e-04 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 1/128 (0%) Frame = +3 Query: 15 LFLFPXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIR 194 + FP E YR+ D GR L + + A KL KV G LN +DG + Sbjct: 84 ILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLA 143 Query: 195 YPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGT-FET 371 + D++ +D +TN+IV +++ I G+ T Sbjct: 144 LDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSASNT 203 Query: 372 IHVEDAQG 395 + V+D G Sbjct: 204 VRVDDENG 211
>RS4E_PYRFU (Q8U011) 30S ribosomal protein S4e| Length = 243 Score = 43.1 bits (100), Expect = 5e-04 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGR----TIR 194 P TGE+YR+L + G+ LH + +++A K ++R+ + + LN +DG +I Sbjct: 94 PETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKRMIKGARVQLNFHDGTNHIVSIA 153 Query: 195 YPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKH-KGTFET 371 D + T+ + + +I++ + F+ I ++ G + Sbjct: 154 EKDNYF-TSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKRFPMGWPDV 212 Query: 372 IHVEDAQGHQFATRLGNVFTIGKGTKPWLSLP 467 + +ED +G F T F +G KP +SLP Sbjct: 213 VTIEDEEGELFDTLKEYAFVVGT-DKPKISLP 243
>RS4E_THEVO (Q97BW4) 30S ribosomal protein S4e| Length = 235 Score = 40.4 bits (93), Expect = 0.003 Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 1/136 (0%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 +GE+YR++Y+ +G L S + A K +V++ L +DGR + D I Sbjct: 89 SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNKVIAPGNKIQLGFHDGRVMVTEDRSI 148 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNRE-KHKGTFETIHVEDA 389 D + L KI + IK I E K + +H ++ Sbjct: 149 SVGDVVIASLPDMKITEIIKMQPGNKAFITGGSHVGETGTISKIEIKESSSANLVHFDEG 208 Query: 390 QGHQFATRLGNVFTIG 437 F T +VF IG Sbjct: 209 ----FTTVKDHVFVIG 220
>RS4E_METAC (Q8TRT5) 30S ribosomal protein S4e| Length = 235 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/84 (29%), Positives = 41/84 (48%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P E YR+L D KGR LH + + + KLC++ + + G LN DG I + Sbjct: 88 PLVNEAYRMLQDEKGRLTLHKLNETNVN-KLCRINNKTTVKGGKFQLNLNDGTNIIGSNE 146 Query: 207 LIKANDTIKLDLETNKIVDFIKFD 278 D++ L + ++V +KF+ Sbjct: 147 -YGTKDSLILSIPDKQVVKHLKFE 169
>RS4E_PICTO (Q6L1B5) 30S ribosomal protein S4e| Length = 234 Score = 40.0 bits (92), Expect = 0.004 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLI 212 +G +Y + YD KG+ + E KL +V+ + + G ++ +DG T+ I Sbjct: 89 SGNDYLVSYDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDI 148 Query: 213 KANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGTFET-IHVEDA 389 K D++ + + +IVD +KF IK+ E + E +H+ + Sbjct: 149 KNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIATIKSIEIKSSSGENMVHMNEG 208 Query: 390 QGHQFATRLGNVFTIGKGTKPWLSLPK 470 F+T VF +G K S+P+ Sbjct: 209 ----FSTVSSYVFVMG-SPKYTFSMPE 230
>RS4E_METMP (P62428) 30S ribosomal protein S4e| Length = 244 Score = 39.7 bits (91), Expect = 0.005 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 8/146 (5%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGR------- 185 P E Y +L+D GR L D KLCK+ + + G LN +DGR Sbjct: 94 PEMDETYLVLFDESGRISLKKTDKTDV--KLCKIVNKTVVKGGNIQLNLHDGRNQIVKVS 151 Query: 186 -TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNREKHKGT 362 + + + K D++ + + I + F I E Sbjct: 152 DAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALY 211 Query: 363 FETIHVEDAQGHQFATRLGNVFTIGK 440 + + +E+ G +F T VF +G+ Sbjct: 212 SDIVTLENKDGEKFKTVKPYVFIVGQ 237
>RS4E_METMA (Q8PV38) 30S ribosomal protein S4e| Length = 235 Score = 37.4 bits (85), Expect = 0.026 Identities = 24/84 (28%), Positives = 40/84 (47%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P E YR+L D KGR L+ + + + KLC++ + + G LN DG I + Sbjct: 88 PLVNEAYRMLQDEKGRLVLYKLNETNVN-KLCRINNKTTVKGGKIQLNLNDGTNILGSND 146 Query: 207 LIKANDTIKLDLETNKIVDFIKFD 278 D++ L + +V +KF+ Sbjct: 147 -YGTKDSLILSIPDKHVVKHLKFE 169
>RS4E_SULTO (Q975J2) 30S ribosomal protein S4e| Length = 243 Score = 35.4 bits (80), Expect = 0.100 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 8/145 (5%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP 206 P + +R++ D + EDAK+K ++ + + G LN DGR I P Sbjct: 88 PSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNKTTNKNGNIQLNLEDGRNILIPKE 147 Query: 207 LIKAND-----TIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKN---REKHKGT 362 + + T+K+++ + I+ + IK + K Sbjct: 148 KVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIIIGGRNVGLHGVIKTIQYAKYKKRK 207 Query: 363 FETIHVEDAQGHQFATRLGNVFTIG 437 + + +E G T L NV IG Sbjct: 208 YSIVTIEQKNGESVQTNLQNVMVIG 232
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 34.7 bits (78), Expect = 0.17 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 333 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWLSLPKG 473 +K R++H+G ++I+ D GH+F G+VF + KP LS +G Sbjct: 95 LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)| Length = 1117 Score = 33.1 bits (74), Expect = 0.50 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = -1 Query: 377 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELDGV 222 ++ LK + L+P D H N +VA T H + D+ D+++N V ++ E D + Sbjct: 72 IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEVSIKNEGDTI 127
>RS4E_PYRAE (Q8ZTD3) 30S ribosomal protein S4e| Length = 238 Score = 33.1 bits (74), Expect = 0.50 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +3 Query: 33 TGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGR---TIRYPD 203 TGE YR++ D + L + E+A KL +V + G L+ +DGR T Sbjct: 91 TGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLEAG 150 Query: 204 PLIKANDTIKLDLETNKI 257 IK D++ DL I Sbjct: 151 KQIKTFDSVLYDLRNKAI 168
>RS4E_SULAC (O05634) 30S ribosomal protein S4e| Length = 244 Score = 32.0 bits (71), Expect = 1.1 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 11/149 (7%) Frame = +3 Query: 27 PXTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTI----- 191 P R++ D ++ EDAK+K ++ + + G+ LN DGR I Sbjct: 88 PSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGE 147 Query: 192 ---RYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXXIKNRE--KHK 356 +Y P + T+K++L KI I + K+K Sbjct: 148 ELSQYNLPTL---TTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLAKYK 204 Query: 357 G-TFETIHVEDAQGHQFATRLGNVFTIGK 440 + + +E G F T L NV IG+ Sbjct: 205 RIKYSLVTLEGKDGSTFQTNLINVMAIGE 233
>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977| Length = 199 Score = 31.2 bits (69), Expect = 1.9 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = -1 Query: 434 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 345 NG H V + GGKL +G+L D LKGSL +L Sbjct: 36 NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) Length = 565 Score = 30.8 bits (68), Expect = 2.5 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +3 Query: 348 KHKGTFETIHVEDAQGHQFATRLGNV 425 KHKGT+ETI E+ GH+ TR+G V Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369
>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV| Length = 547 Score = 30.0 bits (66), Expect = 4.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 357 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 455 GTF T++VE+ G+ +V G G KPW Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546
>EAMA_ECOLI (P31125) Probable amino acid metabolite efflux pump| Length = 299 Score = 29.6 bits (65), Expect = 5.5 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%) Frame = -1 Query: 434 NGEHVAQTGGKLVTLGILNVDGLKGSLMLLPVLDHTNTPSVAPTSHHDD--------VAD 279 NG+HVA G L + G++ ++ H+ P+V VA Sbjct: 136 NGQHVAMLGFMLTLAAAFS--WACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVAS 193 Query: 278 VKLDEVNNLVGLQVELDGVVGLDEWVWVADGAAIIGVQVWDALLAELDRPDLAELELSIL 99 + LD ++ V +D L +++A A I+G +W LL + +A LS+L Sbjct: 194 LILDGSATMIHSLVTIDMTTILS-LMYLAFVATIVGYGIWGTLLGRYETWRVA--PLSLL 250 Query: 98 IPDRVKAEAAL 66 +P A AAL Sbjct: 251 VPVVGLASAAL 261
>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 29.6 bits (65), Expect = 5.5 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = -1 Query: 404 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQV 237 KL LGI VDG+ L + P LD TP + HHD D+++D+ +L V Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQDASLTAYDV 138
>DOT6_YEAST (P40059) Disrupter of telomere silencing protein 6| Length = 670 Score = 29.6 bits (65), Expect = 5.5 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -1 Query: 158 DALLAELDRPDLAELELSILIPDRVKAE 75 DALL E + +L+ +ELSIL+P R + E Sbjct: 444 DALLMENKKRNLSVMELSILLPQRTEVE 471
>PPSA_ARCFU (O29548) Probable phosphoenolpyruvate synthase (EC 2.7.9.2)| (Pyruvate, water dikinase) (PEP synthase) Length = 753 Score = 29.3 bits (64), Expect = 7.2 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +3 Query: 123 KVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIV 260 K+ V+ G+K L DG+T++ P KAN+ + D E K+V Sbjct: 236 KIEEVKIGEKKF-MLTRKDGKTVKVELPPEKANERVLSDEEIEKLV 280
>XYL1_CANSH (Q9P430) NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-) (XR)| Length = 323 Score = 29.3 bits (64), Expect = 7.2 Identities = 22/77 (28%), Positives = 34/77 (44%) Frame = -1 Query: 407 GKLVTLGILNVDGLKGSLMLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELD 228 GK+ ++G+ N G+L+L T P+V HH + KL E VG+ V Sbjct: 162 GKIRSIGVSN---FPGALLLDLFRGATIKPAVLQVEHHPYLQQPKLIEYAQKVGITVTAY 218 Query: 227 GVVGLDEWVWVADGAAI 177 G +V + G A+ Sbjct: 219 SSFGPQSFVEMNQGRAL 235
>YEW3_SCHPO (O14141) Protein C3G6.03c| Length = 236 Score = 28.9 bits (63), Expect = 9.3 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -1 Query: 248 GLQVELDGVVGLDEWVWVADGAAIIGVQVWDALLAELDRPDLAELELSILIPD 90 G +L+ + + W + AD + + V++ L AE D PD+ +ILI D Sbjct: 54 GFPEDLNKSMYITPWEYAADTSVQKAIAVYEKLAAEEDSPDIVVSADTILILD 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,248,497 Number of Sequences: 219361 Number of extensions: 1638136 Number of successful extensions: 5354 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 5070 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5309 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)