ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags34h22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507305.1| PREDICTED Oryza sativa (japonica cultivar-group... 416 e-113
2ref|XM_483502.1| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
3dbj|AK105383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
4dbj|AK073679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
5gb|AY106901.1| Zea mays PCO090197 mRNA sequence 355 1e-94
6gb|BT017794.1| Zea mays clone EL01N0504H02.c mRNA sequence 347 2e-92
7gb|BT016449.1| Zea mays clone Contig282 mRNA sequence 325 9e-86
8gb|AY105272.1| Zea mays PCO090198 mRNA sequence 325 9e-86
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
10dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
11gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 123 7e-25
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
13gb|DQ099084.1| Arachis stenosperma clone AS1RN13D04 microsatelli... 50 0.008
14dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 44 0.49
15gb|AY596303.1| Chlamydomonas reinhardtii unknown mRNA 42 1.9
16gb|AY297781.1| Alcaligenes faecalis strain NCIB 8687 arsenite ox... 42 1.9
17emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.9
18gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 ... 42 1.9
19gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC... 42 1.9
20gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, comple... 42 1.9
21gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome... 40 7.7
22gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome... 40 7.7
23gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, co... 40 7.7
24gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete se... 40 7.7
25emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 7.7
26gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 7.7
27gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, compl... 40 7.7
28gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 40 7.7
29gb|AC027688.5| Homo sapiens chromosome 16 clone RP11-883G14, com... 40 7.7
30gb|AC023819.7| Homo sapiens chromosome 16 clone RP11-1102H15, co... 40 7.7
31emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chr... 40 7.7 
>ref|XM_507305.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.27 mRNA
          Length = 946

 Score =  416 bits (210), Expect = e-113
 Identities = 306/338 (90%)
 Strand = Plus / Plus

                                                                       
Query: 230 cccggctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtgga 289
           |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 207 cccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtgga 266

                                                                       
Query: 290 atacgagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggca 349
            || ||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 267 gtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggca 326

                                                                       
Query: 350 ttatagcgaggatggggtggatcttgtggttaaagattctaatggagcccaagtccgaga 409
           |||||||||||| || ||||||||||||||||| ||| ||||||| || |||||||| ||
Sbjct: 327 ttatagcgaggacggagtggatcttgtggttaaggatcctaatggtgctcaagtccgtga 386

                                                                       
Query: 410 ttctcgtgacaaaactagtgacaaatttgagttcatagttcagaagagaggtgtccatcg 469
           |||||||||||| |||||||| || |||||||||||||||||||||||||| || |||||
Sbjct: 387 ttctcgtgacaagactagtgataagtttgagttcatagttcagaagagaggcgtacatcg 446

                                                                       
Query: 470 cttctgcttcaccaataaatccccatatcacgaaaccatagacttcgacgtgcatgttgg 529
           ||||||||||||||||||||||||||| || |||||  |||| || || |||||||||||
Sbjct: 447 cttctgcttcaccaataaatccccataccatgaaactgtagattttgatgtgcatgttgg 506

                                                 
Query: 530 acattattcgtattttgatcagcatgccaaagatgaac 567
            |||| |||||| |||||||||||||| ||||||||||
Sbjct: 507 ccatttttcgtactttgatcagcatgcgaaagatgaac 544
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>ref|XM_483502.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 920

 Score =  416 bits (210), Expect = e-113
 Identities = 306/338 (90%)
 Strand = Plus / Plus

                                                                       
Query: 230 cccggctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtgga 289
           |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 91  cccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtgga 150

                                                                       
Query: 290 atacgagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggca 349
            || ||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 151 gtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggca 210

                                                                       
Query: 350 ttatagcgaggatggggtggatcttgtggttaaagattctaatggagcccaagtccgaga 409
           |||||||||||| || ||||||||||||||||| ||| ||||||| || |||||||| ||
Sbjct: 211 ttatagcgaggacggagtggatcttgtggttaaggatcctaatggtgctcaagtccgtga 270

                                                                       
Query: 410 ttctcgtgacaaaactagtgacaaatttgagttcatagttcagaagagaggtgtccatcg 469
           |||||||||||| |||||||| || |||||||||||||||||||||||||| || |||||
Sbjct: 271 ttctcgtgacaagactagtgataagtttgagttcatagttcagaagagaggcgtacatcg 330

                                                                       
Query: 470 cttctgcttcaccaataaatccccatatcacgaaaccatagacttcgacgtgcatgttgg 529
           ||||||||||||||||||||||||||| || |||||  |||| || || |||||||||||
Sbjct: 331 cttctgcttcaccaataaatccccataccatgaaactgtagattttgatgtgcatgttgg 390

                                                 
Query: 530 acattattcgtattttgatcagcatgccaaagatgaac 567
            |||| |||||| |||||||||||||| ||||||||||
Sbjct: 391 ccatttttcgtactttgatcagcatgcgaaagatgaac 428
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>dbj|AK105383.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C01, full
           insert sequence
          Length = 920

 Score =  416 bits (210), Expect = e-113
 Identities = 306/338 (90%)
 Strand = Plus / Plus

                                                                       
Query: 230 cccggctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtgga 289
           |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 91  cccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtgga 150

                                                                       
Query: 290 atacgagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggca 349
            || ||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 151 gtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggca 210

                                                                       
Query: 350 ttatagcgaggatggggtggatcttgtggttaaagattctaatggagcccaagtccgaga 409
           |||||||||||| || ||||||||||||||||| ||| ||||||| || |||||||| ||
Sbjct: 211 ttatagcgaggacggagtggatcttgtggttaaggatcctaatggtgctcaagtccgtga 270

                                                                       
Query: 410 ttctcgtgacaaaactagtgacaaatttgagttcatagttcagaagagaggtgtccatcg 469
           |||||||||||| |||||||| || |||||||||||||||||||||||||| || |||||
Sbjct: 271 ttctcgtgacaagactagtgataagtttgagttcatagttcagaagagaggcgtacatcg 330

                                                                       
Query: 470 cttctgcttcaccaataaatccccatatcacgaaaccatagacttcgacgtgcatgttgg 529
           ||||||||||||||||||||||||||| || |||||  |||| || || |||||||||||
Sbjct: 331 cttctgcttcaccaataaatccccataccatgaaactgtagattttgatgtgcatgttgg 390

                                                 
Query: 530 acattattcgtattttgatcagcatgccaaagatgaac 567
            |||| |||||| |||||||||||||| ||||||||||
Sbjct: 391 ccatttttcgtactttgatcagcatgcgaaagatgaac 428
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>dbj|AK073679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050B05, full
           insert sequence
          Length = 947

 Score =  416 bits (210), Expect = e-113
 Identities = 306/338 (90%)
 Strand = Plus / Plus

                                                                       
Query: 230 cccggctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtgga 289
           |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 207 cccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtgga 266

                                                                       
Query: 290 atacgagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggca 349
            || ||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 267 gtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggca 326

                                                                       
Query: 350 ttatagcgaggatggggtggatcttgtggttaaagattctaatggagcccaagtccgaga 409
           |||||||||||| || ||||||||||||||||| ||| ||||||| || |||||||| ||
Sbjct: 327 ttatagcgaggacggagtggatcttgtggttaaggatcctaatggtgctcaagtccgtga 386

                                                                       
Query: 410 ttctcgtgacaaaactagtgacaaatttgagttcatagttcagaagagaggtgtccatcg 469
           |||||||||||| |||||||| || |||||||||||||||||||||||||| || |||||
Sbjct: 387 ttctcgtgacaagactagtgataagtttgagttcatagttcagaagagaggcgtacatcg 446

                                                                       
Query: 470 cttctgcttcaccaataaatccccatatcacgaaaccatagacttcgacgtgcatgttgg 529
           ||||||||||||||||||||||||||| || |||||  |||| || || |||||||||||
Sbjct: 447 cttctgcttcaccaataaatccccataccatgaaactgtagattttgatgtgcatgttgg 506

                                                 
Query: 530 acattattcgtattttgatcagcatgccaaagatgaac 567
            |||| |||||| |||||||||||||| ||||||||||
Sbjct: 507 ccatttttcgtactttgatcagcatgcgaaagatgaac 544
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>gb|AY106901.1| Zea mays PCO090197 mRNA sequence
          Length = 999

 Score =  355 bits (179), Expect = 1e-94
 Identities = 287/323 (88%)
 Strand = Plus / Plus

                                                                       
Query: 243 atccgctttgtgattgatagggaggagtgtttctctcataacgtggaatacgagggggat 302
           |||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 266 atccgcttcgtgatcgatagggaagagtgcttctcgcataacgtggaatacgagggggat 325

                                                                       
Query: 303 actgttcatgtatcatttgtggtgatcaaggctgacactccgtggcattatagcgaggat 362
           ||||| |||||||| || || || |||||||||||||| ||||||||||| |||||||| 
Sbjct: 326 actgtccatgtatccttcgtcgtcatcaaggctgacaccccgtggcattacagcgaggag 385

                                                                       
Query: 363 ggggtggatcttgtggttaaagattctaatggagcccaagtccgagattctcgtgacaaa 422
           || || |||||||||||||| ||| ||||||| || |||||||| ||||| || || || 
Sbjct: 386 ggcgtcgatcttgtggttaaggatcctaatggcgctcaagtccgtgattcccgagataag 445

                                                                       
Query: 423 actagtgacaaatttgagttcatagttcagaagagaggtgtccatcgcttctgcttcacc 482
           ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 446 actagtgacaagtttgagttcatagttcagaagagaggcgtccatcgcttctgcttcacg 505

                                                                       
Query: 483 aataaatccccatatcacgaaaccatagacttcgacgtgcatgttggacattattcgtat 542
           || |||||||||||||||||||| ||||||||||| || |||||||| |||| ||| |||
Sbjct: 506 aacaaatccccatatcacgaaacgatagacttcgatgttcatgttggccatttttcatat 565

                                  
Query: 543 tttgatcagcatgccaaagatga 565
           || || |||||||||||||||||
Sbjct: 566 ttcgagcagcatgccaaagatga 588
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>gb|BT017794.1| Zea mays clone EL01N0504H02.c mRNA sequence
          Length = 1153

 Score =  347 bits (175), Expect = 2e-92
 Identities = 286/323 (88%)
 Strand = Plus / Plus

                                                                       
Query: 243 atccgctttgtgattgatagggaggagtgtttctctcataacgtggaatacgagggggat 302
           |||||||| ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 277 atccgcttcgtgatcgacagggaagagtgcttctcgcataacgtggaatacgagggggat 336

                                                                       
Query: 303 actgttcatgtatcatttgtggtgatcaaggctgacactccgtggcattatagcgaggat 362
           ||||| |||||||| || || || |||||||||||||| ||||||||||| |||||||| 
Sbjct: 337 actgtccatgtatccttcgtcgtcatcaaggctgacaccccgtggcattacagcgaggag 396

                                                                       
Query: 363 ggggtggatcttgtggttaaagattctaatggagcccaagtccgagattctcgtgacaaa 422
           || || |||||||||||||| ||| ||||||| || |||||||| ||||| || || || 
Sbjct: 397 ggcgtcgatcttgtggttaaggatcctaatggcgctcaagtccgtgattcccgagataag 456

                                                                       
Query: 423 actagtgacaaatttgagttcatagttcagaagagaggtgtccatcgcttctgcttcacc 482
           ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 457 actagtgacaagtttgagttcatagttcagaagagaggcgtccatcgcttctgcttcacg 516

                                                                       
Query: 483 aataaatccccatatcacgaaaccatagacttcgacgtgcatgttggacattattcgtat 542
           || |||||||||||||||||||| ||||||||||| || |||||||| |||| ||| |||
Sbjct: 517 aacaaatccccatatcacgaaacgatagacttcgatgttcatgttggccatttttcatat 576

                                  
Query: 543 tttgatcagcatgccaaagatga 565
           || || |||||||||||||||||
Sbjct: 577 ttcgagcagcatgccaaagatga 599
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>gb|BT016449.1| Zea mays clone Contig282 mRNA sequence
          Length = 1023

 Score =  325 bits (164), Expect = 9e-86
 Identities = 281/320 (87%)
 Strand = Plus / Minus

                                                                       
Query: 246 cgctttgtgattgatagggaggagtgtttctctcataacgtggaatacgagggggatact 305
           ||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 771 cgctttgtgatcgatagagaagagtgcttctcgcataacgtggagtatgagggggatact 712

                                                                       
Query: 306 gttcatgtatcatttgtggtgatcaaggctgacactccgtggcattatagcgaggatggg 365
           || |||||||| || || || |||||||||||||| ||||||||||| ||||| || || 
Sbjct: 711 gtccatgtatccttcgtcgtcatcaaggctgacaccccgtggcattacagcgaagaaggc 652

                                                                       
Query: 366 gtggatcttgtggttaaagattctaatggagcccaagtccgagattctcgtgacaaaact 425
           || |||||||||||||| ||| ||||||| || |||||||| |||||||| || || |||
Sbjct: 651 gttgatcttgtggttaaggatcctaatggcgctcaagtccgtgattctcgagataagact 592

                                                                       
Query: 426 agtgacaaatttgagttcatagttcagaagagaggtgtccatcgcttctgcttcaccaat 485
           ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 591 agtgataagtttgagttcatagttcagaagagaggcgtccatcgcttctgcttcacgaat 532

                                                                       
Query: 486 aaatccccatatcacgaaaccatagacttcgacgtgcatgttggacattattcgtatttt 545
           |||||||| || |||||||| ||||||||||||||||||||||| |||| ||| || || 
Sbjct: 531 aaatccccgtaccacgaaactatagacttcgacgtgcatgttggccatttttcatacttc 472

                               
Query: 546 gatcagcatgccaaagatga 565
           || |||||||||||||||||
Sbjct: 471 gagcagcatgccaaagatga 452
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>gb|AY105272.1| Zea mays PCO090198 mRNA sequence
          Length = 1288

 Score =  325 bits (164), Expect = 9e-86
 Identities = 281/320 (87%)
 Strand = Plus / Plus

                                                                       
Query: 246 cgctttgtgattgatagggaggagtgtttctctcataacgtggaatacgagggggatact 305
           ||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 509 cgctttgtgatcgatagagaagagtgcttctcgcataacgtggagtatgagggggatact 568

                                                                       
Query: 306 gttcatgtatcatttgtggtgatcaaggctgacactccgtggcattatagcgaggatggg 365
           || |||||||| || || || |||||||||||||| ||||||||||| ||||| || || 
Sbjct: 569 gtccatgtatccttcgtcgtcatcaaggctgacaccccgtggcattacagcgaagaaggc 628

                                                                       
Query: 366 gtggatcttgtggttaaagattctaatggagcccaagtccgagattctcgtgacaaaact 425
           || |||||||||||||| ||| ||||||| || |||||||| |||||||| || || |||
Sbjct: 629 gttgatcttgtggttaaggatcctaatggcgctcaagtccgtgattctcgagataagact 688

                                                                       
Query: 426 agtgacaaatttgagttcatagttcagaagagaggtgtccatcgcttctgcttcaccaat 485
           ||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 689 agtgataagtttgagttcatagttcagaagagaggcgtccatcgcttctgcttcacgaat 748

                                                                       
Query: 486 aaatccccatatcacgaaaccatagacttcgacgtgcatgttggacattattcgtatttt 545
           |||||||| || |||||||| ||||||||||||||||||||||| |||| ||| || || 
Sbjct: 749 aaatccccgtaccacgaaactatagacttcgacgtgcatgttggccatttttcatacttc 808

                               
Query: 546 gatcagcatgccaaagatga 565
           || |||||||||||||||||
Sbjct: 809 gagcagcatgccaaagatga 828
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  210 bits (106), Expect = 4e-51
 Identities = 139/150 (92%)
 Strand = Plus / Minus

                                                                            
Query: 230      cccggctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtgga 289
                |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 26554254 cccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtgga 26554195

                                                                            
Query: 290      atacgagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggca 349
                 || ||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 26554194 gtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggca 26554135

                                              
Query: 350      ttatagcgaggatggggtggatcttgtggt 379
                |||||||||||| || ||||||||||||||
Sbjct: 26554134 ttatagcgaggacggagtggatcttgtggt 26554105



 Score =  206 bits (104), Expect = 6e-50
 Identities = 167/188 (88%)
 Strand = Plus / Minus

                                                                            
Query: 377      ggttaaagattctaatggagcccaagtccgagattctcgtgacaaaactagtgacaaatt 436
                |||||| ||| ||||||| || |||||||| |||||||||||||| |||||||| || ||
Sbjct: 26553341 ggttaaggatcctaatggtgctcaagtccgtgattctcgtgacaagactagtgataagtt 26553282

                                                                            
Query: 437      tgagttcatagttcagaagagaggtgtccatcgcttctgcttcaccaataaatccccata 496
                |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 26553281 tgagttcatagttcagaagagaggcgtacatcgcttctgcttcaccaataaatccccata 26553222

                                                                            
Query: 497      tcacgaaaccatagacttcgacgtgcatgttggacattattcgtattttgatcagcatgc 556
                 || |||||  |||| || || ||||||||||| |||| |||||| ||||||||||||||
Sbjct: 26553221 ccatgaaactgtagattttgatgtgcatgttggccatttttcgtactttgatcagcatgc 26553162

                        
Query: 557      caaagatg 564
                 |||||||
Sbjct: 26553161 gaaagatg 26553154
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>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0702E04
          Length = 190948

 Score =  210 bits (106), Expect = 4e-51
 Identities = 139/150 (92%)
 Strand = Plus / Minus

                                                                          
Query: 230    cccggctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtgga 289
              |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 103121 cccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtgga 103062

                                                                          
Query: 290    atacgagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggca 349
               || ||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 103061 gtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggca 103002

                                            
Query: 350    ttatagcgaggatggggtggatcttgtggt 379
              |||||||||||| || ||||||||||||||
Sbjct: 103001 ttatagcgaggacggagtggatcttgtggt 102972



 Score =  206 bits (104), Expect = 6e-50
 Identities = 167/188 (88%)
 Strand = Plus / Minus

                                                                          
Query: 377    ggttaaagattctaatggagcccaagtccgagattctcgtgacaaaactagtgacaaatt 436
              |||||| ||| ||||||| || |||||||| |||||||||||||| |||||||| || ||
Sbjct: 102208 ggttaaggatcctaatggtgctcaagtccgtgattctcgtgacaagactagtgataagtt 102149

                                                                          
Query: 437    tgagttcatagttcagaagagaggtgtccatcgcttctgcttcaccaataaatccccata 496
              |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 102148 tgagttcatagttcagaagagaggcgtacatcgcttctgcttcaccaataaatccccata 102089

                                                                          
Query: 497    tcacgaaaccatagacttcgacgtgcatgttggacattattcgtattttgatcagcatgc 556
               || |||||  |||| || || ||||||||||| |||| |||||| ||||||||||||||
Sbjct: 102088 ccatgaaactgtagattttgatgtgcatgttggccatttttcgtactttgatcagcatgc 102029

                      
Query: 557    caaagatg 564
               |||||||
Sbjct: 102028 gaaagatg 102021
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>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Minus

                                                                          
Query: 234    gctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtggaatac 293
              ||||| ||||| ||||| ||||| |||||||| ||||| ||||||||||| || || || 
Sbjct: 104306 gctgcagctattcgcttcgtgatcgatagggaagagtgcttctctcataatgttgattat 104247

                                                                          
Query: 294    gagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggcattat 353
              || || ||||| ||||||||||| ||||| ||||||||||| || || || |||||||||
Sbjct: 104246 gaaggagatacagttcatgtatcctttgttgtgatcaaggcagagacgccatggcattat 104187

                                        
Query: 354    agcgaggatggggtggatcttgtggt 379
              | ||||||||| ||||||||||||||
Sbjct: 104186 accgaggatggcgtggatcttgtggt 104161



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Minus

                                                                          
Query: 435    tttgagttcatagttcagaagagaggtgtccatcgcttctgcttcaccaataaatcccca 494
              ||||| ||||||||||| | |||||| || || |||||||||||||||||||||||||||
Sbjct: 103848 tttgaattcatagttcataggagaggcgttcaccgcttctgcttcaccaataaatcccca 103789

                                                                          
Query: 495    tatcacgaaaccatagacttcgacgtgcatgttggacattattcgtattttgatcagcat 554
              || || |||||  |||| || || || | |||| | || | |||||||| ||| ||||||
Sbjct: 103788 taccatgaaactgtagattttgatgtacttgttagtcacttttcgtattatgaccagcat 103729

                        
Query: 555    gccaaagatg 564
              ||||||||||
Sbjct: 103728 gccaaagatg 103719
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  123 bits (62), Expect = 7e-25
 Identities = 125/146 (85%)
 Strand = Plus / Minus

                                                                            
Query: 234      gctgcggctatccgctttgtgattgatagggaggagtgtttctctcataacgtggaatac 293
                ||||| ||||| ||||| ||||| |||||||| ||||| ||||||||||| || || || 
Sbjct: 19385080 gctgcagctattcgcttcgtgatcgatagggaagagtgcttctctcataatgttgattat 19385021

                                                                            
Query: 294      gagggggatactgttcatgtatcatttgtggtgatcaaggctgacactccgtggcattat 353
                || || ||||| ||||||||||| ||||| ||||||||||| || || || |||||||||
Sbjct: 19385020 gaaggagatacagttcatgtatcctttgttgtgatcaaggcagagacgccatggcattat 19384961

                                          
Query: 354      agcgaggatggggtggatcttgtggt 379
                | ||||||||| ||||||||||||||
Sbjct: 19384960 accgaggatggcgtggatcttgtggt 19384935



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Minus

                                                                            
Query: 435      tttgagttcatagttcagaagagaggtgtccatcgcttctgcttcaccaataaatcccca 494
                ||||| ||||||||||| | |||||| || || |||||||||||||||||||||||||||
Sbjct: 19384622 tttgaattcatagttcataggagaggcgttcaccgcttctgcttcaccaataaatcccca 19384563

                                                                            
Query: 495      tatcacgaaaccatagacttcgacgtgcatgttggacattattcgtattttgatcagcat 554
                || || |||||  |||| || || || | |||| | || | |||||||| ||| ||||||
Sbjct: 19384562 taccatgaaactgtagattttgatgtacttgttagtcacttttcgtattatgaccagcat 19384503

                          
Query: 555      gccaaagatg 564
                ||||||||||
Sbjct: 19384502 gccaaagatg 19384493
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>gb|DQ099084.1| Arachis stenosperma clone AS1RN13D04 microsatellite sequence
          Length = 701

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 471 ttctgcttcaccaataaatccccatatcacgaaaccatagacttcgacgtgcatgttgga 530
           |||||||||| ||| || || || |||||||||||||| || ||||| || ||||| |||
Sbjct: 395 ttctgcttcaacaacaagtctccttatcacgaaaccatcgatttcgatgtacatgtcgga 454

                                                
Query: 531 cattattcgtattttgatcagcatgccaaagatgaac 567
           || |  || || ||||| || |||||||| |||||||
Sbjct: 455 cacttctcttactttgagcaacatgccaaggatgaac 491
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 20     actgcttcttcctccgccgagnaag 44
              ||||||||||||||||||||| |||
Sbjct: 717131 actgcttcttcctccgccgaggaag 717107
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>gb|AY596303.1| Chlamydomonas reinhardtii unknown mRNA
          Length = 2812

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 72   ggagccggacgccagcagcga 92
            |||||||||||||||||||||
Sbjct: 1371 ggagccggacgccagcagcga 1351
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>gb|AY297781.1| Alcaligenes faecalis strain NCIB 8687 arsenite oxidation genes, partial
             sequence
          Length = 71383

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 470   cttctgcttcaccaataaatc 490
             |||||||||||||||||||||
Sbjct: 17431 cttctgcttcaccaataaatc 17451
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      cgacggccgcctgcaggcggt 119
               |||||||||||||||||||||
Sbjct: 3112564 cgacggccgcctgcaggcggt 3112544
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>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete
             sequence
          Length = 79296

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 327   atcaaggctgacactccgtggcattatagcgaggatggggtggatcttgtggt 379
             |||||| ||||| |||  ||||||| || ||||||||| || |||||||||||
Sbjct: 41770 atcaagtctgactctcaatggcattttaacgaggatggtgtagatcttgtggt 41822
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>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
            complete sequence
          Length = 121054

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 327  atcaaggctgacactccgtggcattatagcgaggatggggtggatcttgtggt 379
            |||||| ||||| |||  ||||||| || ||||||||| || |||||||||||
Sbjct: 6804 atcaagtctgactctcaatggcattttaacgaggatggtgtagatcttgtggt 6856
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>gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, complete sequence
          Length = 207362

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 174   gggctgagttggacaagggcttgtgtctt 202
             ||||| |||||||||||||||||| ||||
Sbjct: 82927 gggctaagttggacaagggcttgtttctt 82955
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>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence
          Length = 202934

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tcatggaggggctgagttgg 185
              ||||||||||||||||||||
Sbjct: 160832 tcatggaggggctgagttgg 160813
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>gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome 7, complete sequence
          Length = 183326

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   tcatggaggggctgagttgg 185
             ||||||||||||||||||||
Sbjct: 37141 tcatggaggggctgagttgg 37122
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>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence
          Length = 199993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tgtgtcttggtcctctgcat 214
             ||||||||||||||||||||
Sbjct: 75477 tgtgtcttggtcctctgcat 75496
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>gb|AC143338.29| Medicago truncatula clone mth2-8d13, complete sequence
          Length = 113939

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    attattcgtattttgatcag 551
              ||||||||||||||||||||
Sbjct: 106241 attattcgtattttgatcag 106260
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>emb|BX248359.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              6/8
          Length = 349895

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     cggaagcaccggagccggac 81
              ||||||||||||||||||||
Sbjct: 294739 cggaagcaccggagccggac 294758
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>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    aaaactagtgacaaatttga 439
              ||||||||||||||||||||
Sbjct: 135282 aaaactagtgacaaatttga 135301
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>gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, complete sequence
          Length = 187765

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   aaaactagtgacaaatttga 439
             ||||||||||||||||||||
Sbjct: 82849 aaaactagtgacaaatttga 82868
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>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence
          Length = 202303

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acattattcgtattttgatcagca 553
             ||||||||| ||||||||||||||
Sbjct: 44077 acattattcttattttgatcagca 44054
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>gb|AC027688.5| Homo sapiens chromosome 16 clone RP11-883G14, complete sequence
          Length = 177147

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ccagcagcgatttctccgac 102
             ||||||||||||||||||||
Sbjct: 53287 ccagcagcgatttctccgac 53306
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>gb|AC023819.7| Homo sapiens chromosome 16 clone RP11-1102H15, complete sequence
          Length = 136137

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ccagcagcgatttctccgac 102
             ||||||||||||||||||||
Sbjct: 27330 ccagcagcgatttctccgac 27349
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>emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chromosome 2, complete
             sequence
          Length = 214210

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   tcagaagagaggtgtccatc 468
             ||||||||||||||||||||
Sbjct: 54986 tcagaagagaggtgtccatc 54967


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,092,859
Number of Sequences: 3902068
Number of extensions: 4092859
Number of successful extensions: 72950
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72813
Number of HSP's gapped (non-prelim): 135
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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