>GEA1_YEAST (P47102) ARF guanine-nucleotide exchange factor 1|
          Length = 1408

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = -1

Query: 576  ATLSNHHASVIKINFRHDIRNAKFESW*LFV----NQPRKQNWEYIIHKFSATHELFKTK 409
            A +++H  ++  ++       A+  S+ +F+    + PR    + I H F   +E+F TK
Sbjct: 1079 ALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTK 1138

Query: 408  FFWHEYTEVIPLIWGKNSTNELDQHL 331
            ++  E        WGK   N+L  HL
Sbjct: 1139 YYESE--------WGKQVINDLFTHL 1156

>SYL_CAMJR (Q5HU13) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 809

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = +1

Query: 253 HVPSNTVMTRSQEWAVSCRNFWQIKLQMLV*LICTVLSPDQWYNLSILVPEEL 411
           ++    V  + ++W VS + +W   + M+   IC ++ P +  NL I +PE++
Sbjct: 407 NIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQICGIV-PQKLENLPITLPEDV 458

>YOP1_SCHPO (Q9UU91) Protein yop1|
          Length = 182

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 362 FPQINGITSVYSCQKNFVLNSS*VALNLCMIYSQFCFLGWFTNSYQLSNL 511
           FPQ+N      S +KNF ++   V L    IY+ F FL W    + L+NL
Sbjct: 21  FPQLN------SLEKNFGVSKLYVFLTAAGIYALFLFLNW--GGFLLTNL 62

>POL_SIVGB (P22382) Pol polyprotein [Contains: Protease (Retropepsin) (EC|
           3.4.23.-); Reverse transcriptase/ribonuclease H (EC
           2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)]
          Length = 1009

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 232 KAIAVTGHVPSNTVMTRSQEWAVSCRNFWQIKLQMLV*LICTVLSPDQWYNLSILVPEEL 411
           ++I + G VP   + T  + W      +WQ      V  I T +   +WY+LS   PE L
Sbjct: 542 ESIVIWGFVPKMQIPTTREIWEDWWHEYWQCTWIPEVEFISTPMLEREWYSLS---PEPL 598

>PCK2_SCHPO (P36583) Protein kinase C-like 2 (EC 2.7.11.13)|
          Length = 1016

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
 Frame = -1

Query: 465  NWEYIIHK------FSATHELFKTKFFWHEYTEVIPLIWGKNS--TNELDQHLK 328
            NW+ I HK        + +    TK+F  E+T  +P++   NS  T E+ QH +
Sbjct: 946  NWDDIYHKRTQPPYIPSLNSPTDTKYFDEEFTRELPVLTPVNSILTKEMQQHFE 999


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,121,683
Number of Sequences: 219361
Number of extensions: 1488456
Number of successful extensions: 3759
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3756
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)