ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33p22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481577.1| Oryza sativa (japonica cultivar-group), mRNA 418 e-114
2dbj|AK121802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-114
3gb|BT017230.1| Zea mays clone EL01N0302G09.c mRNA sequence 361 2e-96
4dbj|AK104999.2| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
6dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
7dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
8gb|AY111002.1| Zea mays CL3259_1 mRNA sequence 143 7e-31
9ref|NM_180670.1| Arabidopsis thaliana RNA binding / nucleic acid... 74 5e-10
10ref|NM_148717.2| Arabidopsis thaliana RNA binding / nucleic acid... 74 5e-10
11gb|AY123003.1| Arabidopsis thaliana unknown protein (At3g13224) ... 74 5e-10
12gb|AY080630.1| Arabidopsis thaliana unknown protein (At3g13224) ... 74 5e-10
13gb|AY093378.1| Arabidopsis thaliana unknown protein (MJH23.3) mR... 74 5e-10
14gb|AY062696.1| Arabidopsis thaliana Unknown protein (MJH23.3) mR... 74 5e-10
15dbj|AK221448.1| Arabidopsis thaliana mRNA for hypothetical prote... 74 5e-10
16gb|BT014265.1| Lycopersicon esculentum clone 133490R, mRNA sequence 58 3e-05
17gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, comple... 44 0.46
18ref|NM_123413.2| Arabidopsis thaliana RNA binding / nucleic acid... 42 1.8
19gb|BT018297.1| Zea mays clone EL01T0206A04.c mRNA sequence 42 1.8
20gb|BT013798.1| Lycopersicon esculentum clone 132719F, mRNA sequence 42 1.8
21gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, comp... 42 1.8
22gb|AC079791.5| Homo sapiens BAC clone RP11-500M10 from 7, comple... 42 1.8
23gb|AY136466.1| Arabidopsis thaliana ribonucleoprotein-like (At5g... 42 1.8
24gb|AC092060.2| Homo sapiens chromosome 3 clone RP11-582M4, compl... 42 1.8
25dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
26dbj|AP002042.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.8
27dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.8
28dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
29gb|AY106573.1| Zea mays PCO117989 mRNA sequence 42 1.8
30emb|CT030180.3| M.truncatula DNA sequence from clone MTH2-177C12... 42 1.8
31ref|NM_105218.3| Arabidopsis thaliana GTB1; RNA binding / hydrol... 40 7.2
32ref|XM_483105.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.2
33ref|XM_507277.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 7.2
34gb|BC081878.1| Rattus norvegicus heterogeneous nuclear ribonucle... 40 7.2
35gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence 40 7.2
36gb|AE014309.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 7.2
37gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete se... 40 7.2
38gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete seq... 40 7.2
39gb|AY363227.1| Rattus norvegicus heterogeneous nuclear ribonucle... 40 7.2
40gb|AY363226.1| Rattus norvegicus heterogeneous nuclear ribonucle... 40 7.2
41emb|AL356376.9| Human DNA sequence from clone RP11-155N20 on chr... 40 7.2
42gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's ... 40 7.2
43emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12... 40 7.2
44emb|BX294150.1| Pirellula sp. strain 1 complete genome; segment ... 40 7.2
45ref|NM_198132.2| Rattus norvegicus heterogeneous nuclear ribonuc... 40 7.2
46gb|AC018499.3| Homo sapiens chromosome 3 clone RP11-267L16 map 3... 40 7.2
47ref|NM_062835.2| Caenorhabditis elegans CPEB polyA binding famil... 40 7.2
48dbj|AP000041.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 7.2
49gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 se... 40 7.2
50ref|XM_344132.2| PREDICTED: Rattus norvegicus similar to Hnrpa3 ... 40 7.2
51ref|XM_238069.3| PREDICTED: Rattus norvegicus similar to Hnrpa3 ... 40 7.2
52ref|XM_574918.1| PREDICTED: Rattus norvegicus similar to Hnrpa3 ... 40 7.2
53ref|XM_237842.3| PREDICTED: Rattus norvegicus similar to heterog... 40 7.2
54emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, c... 40 7.2
55emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in... 40 7.2
56emb|AL954213.1| Pan troglodytes chromosome 22 clone RP43-040C07 ... 40 7.2
57emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 ... 40 7.2
58dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
59dbj|AK100101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
60dbj|AK071053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
61dbj|AK060178.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
62emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 40 7.2
63gb|AF053720.1|AF053720 Canine calicivirus RNA polymerase gene, p... 40 7.2
64dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.2
65gb|U20948.1|ITU20948 Ipomoea trifida receptor protein kinase (IR... 40 7.2
66gb|AC018502.6| Homo sapiens chromosome 3 clone RP11-327H17 map 3... 40 7.2
67dbj|AB070225.1| Canine calicivirus orf1, orf2, orf3 genes for no... 40 7.2
68dbj|AP000287.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.2
69dbj|AP000185.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.2
70dbj|AP000109.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 7.2 
>ref|XM_481577.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1053

 Score =  418 bits (211), Expect = e-114
 Identities = 352/399 (88%)
 Strand = Plus / Plus

                                                                       
Query: 129 catgggtacgttcaaagagtactttgggaagtatggggagatagtcgatgcggtaataat 188
           ||||||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 81  catgggtactttcaaagaatactttgggaagtatggggagatagttgatgccgtcataat 140

                                                                       
Query: 189 gaaggaacgccatacccaaaagcccagaggctttggatttattacctattcagatcctgc 248
           |||||| |||  |||||| || |||||||| |||||||||||||||| | ||||||||||
Sbjct: 141 gaaggaccgctttacccagaaacccagaggatttggatttattacctttgcagatcctgc 200

                                                                       
Query: 249 tattgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaa 308
           | ||||||||||||||||||| || |||||||| ||  |||| ||| |||||||||||||
Sbjct: 201 tgttgttgacagagtgattgaggacaaccatgttattaatggaaaggaggttgaaattaa 260

                                                                       
Query: 309 aaggactatcccgaagggtgctgctcccctgaaagatttcaagacaaagaagatttttgt 368
            || ||||| || ||||||||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 261 gagaactattccaaagggtgctgcccccctaaaagatttcaagacgaagaaaatatttgt 320

                                                                       
Query: 369 tggtggattgcctactgctctaagagatgatgaattcaaggacttcttttcaaagtttgg 428
           ||||||||| ||  ||||| | | ||| |||||||||||||| |||||||| || |||||
Sbjct: 321 tggtggattaccatctgctttgaaagaagatgaattcaaggagttcttttcgaaatttgg 380

                                                                       
Query: 429 aaaggtggtggaacatgagatcatctgtgaccattcgaccaaccggtcacgaggatttgg 488
           |||||||||||||||||| |||||  |||||||||| || ||||||||||||||||||||
Sbjct: 381 aaaggtggtggaacatgaaatcattcgtgaccattcaactaaccggtcacgaggatttgg 440

                                                  
Query: 489 atttatagtgtttgatgcagaaaaaactgtagatgaatt 527
           |||| |||| |||||||||||||||||||||||||||||
Sbjct: 441 atttgtagtctttgatgcagaaaaaactgtagatgaatt 479
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>dbj|AK121802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097J11, full
           insert sequence
          Length = 1427

 Score =  418 bits (211), Expect = e-114
 Identities = 352/399 (88%)
 Strand = Plus / Plus

                                                                       
Query: 129 catgggtacgttcaaagagtactttgggaagtatggggagatagtcgatgcggtaataat 188
           ||||||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 139 catgggtactttcaaagaatactttgggaagtatggggagatagttgatgccgtcataat 198

                                                                       
Query: 189 gaaggaacgccatacccaaaagcccagaggctttggatttattacctattcagatcctgc 248
           |||||| |||  |||||| || |||||||| |||||||||||||||| | ||||||||||
Sbjct: 199 gaaggaccgctttacccagaaacccagaggatttggatttattacctttgcagatcctgc 258

                                                                       
Query: 249 tattgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaa 308
           | ||||||||||||||||||| || |||||||| ||  |||| ||| |||||||||||||
Sbjct: 259 tgttgttgacagagtgattgaggacaaccatgttattaatggaaaggaggttgaaattaa 318

                                                                       
Query: 309 aaggactatcccgaagggtgctgctcccctgaaagatttcaagacaaagaagatttttgt 368
            || ||||| || ||||||||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 319 gagaactattccaaagggtgctgcccccctaaaagatttcaagacgaagaaaatatttgt 378

                                                                       
Query: 369 tggtggattgcctactgctctaagagatgatgaattcaaggacttcttttcaaagtttgg 428
           ||||||||| ||  ||||| | | ||| |||||||||||||| |||||||| || |||||
Sbjct: 379 tggtggattaccatctgctttgaaagaagatgaattcaaggagttcttttcgaaatttgg 438

                                                                       
Query: 429 aaaggtggtggaacatgagatcatctgtgaccattcgaccaaccggtcacgaggatttgg 488
           |||||||||||||||||| |||||  |||||||||| || ||||||||||||||||||||
Sbjct: 439 aaaggtggtggaacatgaaatcattcgtgaccattcaactaaccggtcacgaggatttgg 498

                                                  
Query: 489 atttatagtgtttgatgcagaaaaaactgtagatgaatt 527
           |||| |||| |||||||||||||||||||||||||||||
Sbjct: 499 atttgtagtctttgatgcagaaaaaactgtagatgaatt 537
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>gb|BT017230.1| Zea mays clone EL01N0302G09.c mRNA sequence
          Length = 1374

 Score =  361 bits (182), Expect = 2e-96
 Identities = 371/434 (85%)
 Strand = Plus / Minus

                                                                        
Query: 91   gccaagatgttcatcggcgggctctccaggcagacaagcatgggtacgttcaaagagtac 150
            |||||||| ||||| ||||||||||||| | | ||||||||| |||| ||||||||  | 
Sbjct: 1257 gccaagatcttcattggcgggctctccaaggatacaagcatgagtacattcaaagaacat 1198

                                                                        
Query: 151  tttgggaagtatggggagatagtcgatgcggtaataatgaaggaacgccatacccaaaag 210
            ||||||||||||||||| ||| | ||||| || ||||||||||| ||| | || ||||||
Sbjct: 1197 tttgggaagtatggggatataattgatgctgtcataatgaaggaccgctacacacaaaag 1138

                                                                        
Query: 211  cccagaggctttggatttattacctattcagatcctgctattgttgacagagtgattgaa 270
            |||||||||||||| |||||||| | | | |||||  || ||||||||||||||||||| 
Sbjct: 1137 cccagaggctttggctttattacttttgctgatcccactgttgttgacagagtgattgag 1078

                                                                        
Query: 271  gataaccatgtcatcgatggcaagcaggttgaaattaaaaggactatcccgaagggtgct 330
            ||| | ||||| ||| |||| || | |||||||||||| || || ||||| ||||| |||
Sbjct: 1077 gatgaacatgttatcaatggaaaaccggttgaaattaagagaacgatccctaagggagct 1018

                                                                        
Query: 331  gctcccctgaaagatttcaagacaaagaagatttttgttggtggattgcctactgctcta 390
            |||||  |||||||||||||||| ||||||||||||||||||||||| ||  | ||||||
Sbjct: 1017 gctcctttgaaagatttcaagacgaagaagatttttgttggtggattaccctcagctcta 958

                                                                        
Query: 391  agagatgatgaattcaaggacttcttttcaaagtttggaaaggtggtggaacatgagatc 450
            | ||| |||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||
Sbjct: 957  aaagaagatgaattcaaggaattcttttccaagtttgggaaggttgtggagcatgaaatc 898

                                                                        
Query: 451  atctgtgaccattcgaccaaccggtcacgaggatttggatttatagtgtttgatgcagaa 510
            ||| |||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 897  atccgtgaccatgcaaccaaccggtcacgtggatttggttttatagtctttgatgcagaa 838

                          
Query: 511  aaaactgtagatga 524
            ||| | ||||||||
Sbjct: 837  aaagcagtagatga 824
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>dbj|AK104999.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-E11, full
           insert sequence
          Length = 1178

 Score =  202 bits (102), Expect = 8e-49
 Identities = 162/182 (89%)
 Strand = Plus / Plus

                                                                       
Query: 346 ttcaagacaaagaagatttttgttggtggattgcctactgctctaagagatgatgaattc 405
           |||||||| ||||| || |||||||||||||| ||  ||||| | | ||| |||||||||
Sbjct: 1   ttcaagacgaagaaaatatttgttggtggattaccatctgctttgaaagaagatgaattc 60

                                                                       
Query: 406 aaggacttcttttcaaagtttggaaaggtggtggaacatgagatcatctgtgaccattcg 465
           ||||| |||||||| || ||||||||||||||||||||||| |||||  |||||||||| 
Sbjct: 61  aaggagttcttttcgaaatttggaaaggtggtggaacatgaaatcattcgtgaccattca 120

                                                                       
Query: 466 accaaccggtcacgaggatttggatttatagtgtttgatgcagaaaaaactgtagatgaa 525
           || |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 121 actaaccggtcacgaggatttggatttgtagtctttgatgcagaaaaaactgtagatgaa 180

             
Query: 526 tt 527
           ||
Sbjct: 181 tt 182
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  180 bits (91), Expect = 3e-42
 Identities = 121/131 (92%)
 Strand = Plus / Plus

                                                                            
Query: 397      gatgaattcaaggacttcttttcaaagtttggaaaggtggtggaacatgagatcatctgt 456
                |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||  ||
Sbjct: 13926071 gatgaattcaaggagttcttttcgaaatttggaaaggtggtggaacatgaaatcattcgt 13926130

                                                                            
Query: 457      gaccattcgaccaaccggtcacgaggatttggatttatagtgtttgatgcagaaaaaact 516
                |||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 13926131 gaccattcaactaaccggtcacgaggatttggatttgtagtctttgatgcagaaaaaact 13926190

                           
Query: 517      gtagatgaatt 527
                |||||||||||
Sbjct: 13926191 gtagatgaatt 13926201



 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                            
Query: 133      ggtacgttcaaagagtactttgggaagtatggggagatagtcgatgcggtaataatgaag 192
                ||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 13925517 ggtactttcaaagaatactttgggaagtatggggagatagttgatgccgtcataatgaag 13925576

                                                                            
Query: 193      gaacgccatacccaaaagcccagaggctttggatttattacctattcagatcctgctatt 252
                || |||  |||||| || |||||||| |||||||||||||||| | ||||||||||| ||
Sbjct: 13925577 gaccgctttacccagaaacccagaggatttggatttattacctttgcagatcctgctgtt 13925636

                                             
Query: 253      gttgacagagtgattgaagataaccatgt 281
                ||||||||||||||||| || ||||||||
Sbjct: 13925637 gttgacagagtgattgaggacaaccatgt 13925665



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                            
Query: 294      gcaggttgaaattaaaaggactatcccgaagggtgctgctcccctgaaagatttcaagac 353
                ||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 13925875 gcaggttgaaattaagagaactattccaaagggtgctgcccccctaaaagatttcaagac 13925934

                                        
Query: 354      aaagaagatttttgttggtggatt 377
                 ||||| || ||||||||||||||
Sbjct: 13925935 gaagaaaatatttgttggtggatt 13925958



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 408     ggacttcttttcaaagtttgg 428
               |||||||||||||||||||||
Sbjct: 6183474 ggacttcttttcaaagtttgg 6183454



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 466      accaaccggtcacgaggatttggatttatagt 497
                ||||| || |||||||| ||||||||||||||
Sbjct: 24309296 accaagcgttcacgaggctttggatttatagt 24309265
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>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0465H09
          Length = 148590

 Score =  180 bits (91), Expect = 3e-42
 Identities = 121/131 (92%)
 Strand = Plus / Plus

                                                                          
Query: 397    gatgaattcaaggacttcttttcaaagtttggaaaggtggtggaacatgagatcatctgt 456
              |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||  ||
Sbjct: 133790 gatgaattcaaggagttcttttcgaaatttggaaaggtggtggaacatgaaatcattcgt 133849

                                                                          
Query: 457    gaccattcgaccaaccggtcacgaggatttggatttatagtgtttgatgcagaaaaaact 516
              |||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 133850 gaccattcaactaaccggtcacgaggatttggatttgtagtctttgatgcagaaaaaact 133909

                         
Query: 517    gtagatgaatt 527
              |||||||||||
Sbjct: 133910 gtagatgaatt 133920



 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                          
Query: 133    ggtacgttcaaagagtactttgggaagtatggggagatagtcgatgcggtaataatgaag 192
              ||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 133236 ggtactttcaaagaatactttgggaagtatggggagatagttgatgccgtcataatgaag 133295

                                                                          
Query: 193    gaacgccatacccaaaagcccagaggctttggatttattacctattcagatcctgctatt 252
              || |||  |||||| || |||||||| |||||||||||||||| | ||||||||||| ||
Sbjct: 133296 gaccgctttacccagaaacccagaggatttggatttattacctttgcagatcctgctgtt 133355

                                           
Query: 253    gttgacagagtgattgaagataaccatgt 281
              ||||||||||||||||| || ||||||||
Sbjct: 133356 gttgacagagtgattgaggacaaccatgt 133384



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                          
Query: 294    gcaggttgaaattaaaaggactatcccgaagggtgctgctcccctgaaagatttcaagac 353
              ||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 133594 gcaggttgaaattaagagaactattccaaagggtgctgcccccctaaaagatttcaagac 133653

                                      
Query: 354    aaagaagatttttgttggtggatt 377
               ||||| || ||||||||||||||
Sbjct: 133654 gaagaaaatatttgttggtggatt 133677
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>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1136_D12
          Length = 105521

 Score =  180 bits (91), Expect = 3e-42
 Identities = 121/131 (92%)
 Strand = Plus / Plus

                                                                         
Query: 397   gatgaattcaaggacttcttttcaaagtttggaaaggtggtggaacatgagatcatctgt 456
             |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||  ||
Sbjct: 70466 gatgaattcaaggagttcttttcgaaatttggaaaggtggtggaacatgaaatcattcgt 70525

                                                                         
Query: 457   gaccattcgaccaaccggtcacgaggatttggatttatagtgtttgatgcagaaaaaact 516
             |||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 70526 gaccattcaactaaccggtcacgaggatttggatttgtagtctttgatgcagaaaaaact 70585

                        
Query: 517   gtagatgaatt 527
             |||||||||||
Sbjct: 70586 gtagatgaatt 70596



 Score =  168 bits (85), Expect = 1e-38
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                         
Query: 133   ggtacgttcaaagagtactttgggaagtatggggagatagtcgatgcggtaataatgaag 192
             ||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 69912 ggtactttcaaagaatactttgggaagtatggggagatagttgatgccgtcataatgaag 69971

                                                                         
Query: 193   gaacgccatacccaaaagcccagaggctttggatttattacctattcagatcctgctatt 252
             || |||  |||||| || |||||||| |||||||||||||||| | ||||||||||| ||
Sbjct: 69972 gaccgctttacccagaaacccagaggatttggatttattacctttgcagatcctgctgtt 70031

                                          
Query: 253   gttgacagagtgattgaagataaccatgt 281
             ||||||||||||||||| || ||||||||
Sbjct: 70032 gttgacagagtgattgaggacaaccatgt 70060



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 294   gcaggttgaaattaaaaggactatcccgaagggtgctgctcccctgaaagatttcaagac 353
             ||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 70270 gcaggttgaaattaagagaactattccaaagggtgctgcccccctaaaagatttcaagac 70329

                                     
Query: 354   aaagaagatttttgttggtggatt 377
              ||||| || ||||||||||||||
Sbjct: 70330 gaagaaaatatttgttggtggatt 70353
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>gb|AY111002.1| Zea mays CL3259_1 mRNA sequence
          Length = 1526

 Score =  143 bits (72), Expect = 7e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 385  gctctaagagatgatgaattcaaggacttcttttcaaagtttggaaaggtggtggaacat 444
            ||||||| ||| |||||||||||||| |||||||| |||||||| ||||| ||||| |||
Sbjct: 1092 gctctaaaagaagatgaattcaaggaattcttttccaagtttgggaaggttgtggagcat 1033

                                                                        
Query: 445  gagatcatctgtgaccattcgaccaaccggtcacgaggatttggatttatagtgtttgat 504
            || |||||| |||||||| | |||||||||||||| |||||||| |||||||| ||||||
Sbjct: 1032 gaaatcatccgtgaccatgcaaccaaccggtcacgtggatttggttttatagtctttgat 973

                                
Query: 505  gcagaaaaaactgtagatga 524
            ||||| ||| | ||||||||
Sbjct: 972  gcagacaaagcagtagatga 953



 Score =  117 bits (59), Expect = 4e-23
 Identities = 146/175 (83%)
 Strand = Plus / Minus

                                                                        
Query: 151  tttgggaagtatggggagatagtcgatgcggtaataatgaaggaacgccatacccaaaag 210
            ||||||||||||||||| ||| | ||||| || ||||||||||| ||| | || ||||||
Sbjct: 1326 tttgggaagtatggggatataattgatgctgtcataatgaaggaccgctacacacaaaag 1267

                                                                        
Query: 211  cccagaggctttggatttattacctattcagatcctgctattgttgacagagtgattgaa 270
            |||||||||||||| |||||||| | | | |||||  || ||||||||||||||||||| 
Sbjct: 1266 cccagaggctttggctttattacttttgctgatcccactgttgttgacagagtgattgag 1207

                                                                   
Query: 271  gataaccatgtcatcgatggcaagcaggttgaaattaaaaggactatcccgaagg 325
            ||| | ||||| ||| |||| || | |||||||||||| || || ||||| ||||
Sbjct: 1206 gatgaacatgttatcaatggaaaaccggttgaaattaagagaacgatccctaagg 1152
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>ref|NM_180670.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G13224
           transcript variant AT3G13224.1 mRNA, complete cds
          Length = 2179

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 303 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 362

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 363 ggactattccgaaaggtgctg 383



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 405 tcaaaacaaagaagattttcgttggtgg 432
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>ref|NM_148717.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT3G13224
           transcript variant AT3G13224.2 mRNA, complete cds
          Length = 1959

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 311 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 370

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 371 ggactattccgaaaggtgctg 391



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 413 tcaaaacaaagaagattttcgttggtgg 440
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>gb|AY123003.1| Arabidopsis thaliana unknown protein (At3g13224) mRNA, complete cds
          Length = 1108

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 215 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 274

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 275 ggactattccgaaaggtgctg 295



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 317 tcaaaacaaagaagattttcgttggtgg 344
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>gb|AY080630.1| Arabidopsis thaliana unknown protein (At3g13224) mRNA, complete cds
          Length = 1486

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 311 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 370

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 371 ggactattccgaaaggtgctg 391



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 413 tcaaaacaaagaagattttcgttggtgg 440
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>gb|AY093378.1| Arabidopsis thaliana unknown protein (MJH23.3) mRNA, complete cds
          Length = 939

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 215 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 274

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 275 ggactattccgaaaggtgctg 295



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 317 tcaaaacaaagaagattttcgttggtgg 344
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>gb|AY062696.1| Arabidopsis thaliana Unknown protein (MJH23.3) mRNA, complete cds
          Length = 2179

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 303 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 362

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 363 ggactattccgaaaggtgctg 383



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 405 tcaaaacaaagaagattttcgttggtgg 432
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>dbj|AK221448.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL07-13-B04
          Length = 1699

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                       
Query: 251 ttgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaaattaaaa 310
           ||||||||| ||| || |||||||  ||||||||| ||||||| |||||||| || ||||
Sbjct: 306 ttgttgacaaagttatcgaagatactcatgtcatcaatggcaaacaggttgagatcaaaa 365

                                
Query: 311 ggactatcccgaagggtgctg 331
           ||||||| ||||| |||||||
Sbjct: 366 ggactattccgaaaggtgctg 386



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 347 tcaagacaaagaagatttttgttggtgg 374
           |||| |||||||||||||| ||||||||
Sbjct: 408 tcaaaacaaagaagattttcgttggtgg 435
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>gb|BT014265.1| Lycopersicon esculentum clone 133490R, mRNA sequence
          Length = 1724

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 340 aaagatttcaagacaaagaagatttttgt 368
           |||||||||||||||||||||||||||||
Sbjct: 574 aaagatttcaagacaaagaagatttttgt 602
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>gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, complete sequence
          Length = 191211

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 480   aggatttggatttatagtgtttgatg 505
             ||||||||||||| ||||||||||||
Sbjct: 52302 aggatttggatttgtagtgtttgatg 52327
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>ref|NM_123413.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G40490
           mRNA, complete cds
          Length = 1665

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 343 gatttcaagacaaagaagatttttgttggtgga 375
           |||||||| || |||||||| ||||||||||||
Sbjct: 483 gatttcaaaaccaagaagatatttgttggtgga 515



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 288 tggcaagcaggttgaaattaa 308
           |||||||||||||||||||||
Sbjct: 428 tggcaagcaggttgaaattaa 448



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 gatgatgaattcaaggacttcttt 417
           ||||||||||||||||| ||||||
Sbjct: 534 gatgatgaattcaaggagttcttt 557
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>gb|BT018297.1| Zea mays clone EL01T0206A04.c mRNA sequence
          Length = 1600

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 cctgctattgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaa 303
           |||||| ||||||| | |||||| || || || ||||| ||| |||| ||||| ||||||
Sbjct: 275 cctgctgttgttgataaagtgatagaggacaatcatgttatcaatggaaagcaagttgaa 334

                
Query: 304 attaa 308
           |||||
Sbjct: 335 attaa 339



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 343 gatttcaagacaaagaagatttttgttggtgg 374
           ||||||||||| || ||||| |||||||||||
Sbjct: 380 gatttcaagactaaaaagatatttgttggtgg 411
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>gb|BT013798.1| Lycopersicon esculentum clone 132719F, mRNA sequence
          Length = 2204

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 205 caaaagcccagaggctttggatttattac 233
           |||| ||| ||||||||||||||||||||
Sbjct: 704 caaaggcctagaggctttggatttattac 732
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>gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, complete sequence
          Length = 197121

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 342    agatttcaagacaaagaagat 362
              |||||||||||||||||||||
Sbjct: 142293 agatttcaagacaaagaagat 142273
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>gb|AC079791.5| Homo sapiens BAC clone RP11-500M10 from 7, complete sequence
          Length = 103836

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 342   agatttcaagacaaagaagat 362
             |||||||||||||||||||||
Sbjct: 11715 agatttcaagacaaagaagat 11695
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>gb|AY136466.1| Arabidopsis thaliana ribonucleoprotein-like (At5g40490) mRNA,
           complete cds
          Length = 1665

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 343 gatttcaagacaaagaagatttttgttggtgga 375
           |||||||| || |||||||| ||||||||||||
Sbjct: 483 gatttcaaaaccaagaagatatttgttggtgga 515



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 288 tggcaagcaggttgaaattaa 308
           |||||||||||||||||||||
Sbjct: 428 tggcaagcaggttgaaattaa 448



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 394 gatgatgaattcaaggacttcttt 417
           ||||||||||||||||| ||||||
Sbjct: 534 gatgatgaattcaaggagttcttt 557
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>gb|AC092060.2| Homo sapiens chromosome 3 clone RP11-582M4, complete sequence
          Length = 181220

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 386    ctctaagagatgatgaattca 406
              |||||||||||||||||||||
Sbjct: 104467 ctctaagagatgatgaattca 104487
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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 408   ggacttcttttcaaagtttgg 428
             |||||||||||||||||||||
Sbjct: 46867 ggacttcttttcaaagtttgg 46847
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>dbj|AP002042.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJH23
          Length = 6255

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 295  caggttgaaattaaaaggactatcccgaagggtgctg 331
            |||||||| || ||||||||||| ||||| |||||||
Sbjct: 1901 caggttgagatcaaaaggactattccgaaaggtgctg 1937



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 347  tcaagacaaagaagatttttgttggtgg 374
            |||| |||||||||||||| ||||||||
Sbjct: 1959 tcaaaacaaagaagattttcgttggtgg 1986
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>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13
          Length = 85992

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 343  gatttcaagacaaagaagatttttgttggtgga 375
            |||||||| || |||||||| ||||||||||||
Sbjct: 1111 gatttcaaaaccaagaagatatttgttggtgga 1143
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0486F07
          Length = 154926

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 408    ggacttcttttcaaagtttgg 428
              |||||||||||||||||||||
Sbjct: 139491 ggacttcttttcaaagtttgg 139471
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>gb|AY106573.1| Zea mays PCO117989 mRNA sequence
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 cctgctattgttgacagagtgattgaagataaccatgtcatcgatggcaagcaggttgaa 303
           |||||| ||||||| | |||||| || || || ||||| ||| |||| ||||| ||||||
Sbjct: 313 cctgctgttgttgataaagtgatagaggacaatcatgttatcaatggaaagcaagttgaa 372

                
Query: 304 attaa 308
           |||||
Sbjct: 373 attaa 377



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 343 gatttcaagacaaagaagatttttgttggtgg 374
           ||||||||||| || ||||| |||||||||||
Sbjct: 418 gatttcaagactaaaaagatatttgttggtgg 449
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>emb|CT030180.3| M.truncatula DNA sequence from clone MTH2-177C12 on chromosome 3,
             complete sequence
          Length = 141577

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 346   ttcaagacaaagaagatttttgttggtgg 374
             ||||| || ||||||||||||||||||||
Sbjct: 55956 ttcaaaactaagaagatttttgttggtgg 55928
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>ref|NM_105218.3| Arabidopsis thaliana GTB1; RNA binding / hydrolase, acting on ester
            bonds AT1G65440 (GTB1) mRNA, complete cds
          Length = 5315

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   ctcgcttccccaaccaccag 46
            ||||||||||||||||||||
Sbjct: 4746 ctcgcttccccaaccaccag 4727
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>ref|XM_483105.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1344

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 466 accaaccggtcacgaggatttggatttatagt 497
           ||||| || |||||||| ||||||||||||||
Sbjct: 460 accaagcgttcacgaggctttggatttatagt 491
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>ref|XM_507277.1| PREDICTED Oryza sativa (japonica cultivar-group), P0686H11.12
           patrial mRNA
          Length = 1387

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 466 accaaccggtcacgaggatttggatttatagt 497
           ||||| || |||||||| ||||||||||||||
Sbjct: 503 accaagcgttcacgaggctttggatttatagt 534
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>gb|BC081878.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3, mRNA
           (cDNA clone MGC:93744 IMAGE:7108128), complete cds
          Length = 2608

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 396 aagaagatttttgttggtgg 415
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>gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence
          Length = 41334

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  tttttgttggtggattgcct 381
            ||||||||||||||||||||
Sbjct: 2767 tttttgttggtggattgcct 2786
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>gb|AE014309.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 6 of
              11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 329    ctgctcccctgaaagatttcaagacaaa 356
              |||| ||| |||||||||||||||||||
Sbjct: 235219 ctgcacccttgaaagatttcaagacaaa 235246
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>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence
          Length = 124069

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   tttgatgcagaaaaaactgt 518
             ||||||||||||||||||||
Sbjct: 64115 tttgatgcagaaaaaactgt 64134
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>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence
          Length = 96063

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   tttgatgcagaaaaaactgt 518
             ||||||||||||||||||||
Sbjct: 89761 tttgatgcagaaaaaactgt 89742
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>gb|AY363227.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3
           variant b mRNA, complete cds; alternatively spliced
          Length = 1100

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 336 aagaagatttttgttggtgg 355
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>gb|AY363226.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3
           variant a mRNA, complete cds; alternatively spliced
          Length = 1166

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 402 aagaagatttttgttggtgg 421
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>emb|AL356376.9| Human DNA sequence from clone RP11-155N20 on chromosome 13, complete
              sequence
          Length = 143683

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 329    ctgctcccctgaaagatttcaagacaaa 356
              |||| ||| |||||||||||||||||||
Sbjct: 131752 ctgcacccttgaaagatttcaagacaaa 131779
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>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    aagaagatttttgttggtgg 374
              ||||||||||||||||||||
Sbjct: 125703 aagaagatttttgttggtgg 125684
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>emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12 on chromosome 6p22.2-22.3,
              complete sequence
          Length = 175555

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 491    ttatagtgtttgatgcagaaaaaa 514
              ||||| ||||||||||||||||||
Sbjct: 162125 ttatactgtttgatgcagaaaaaa 162148
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>emb|BX294150.1| Pirellula sp. strain 1 complete genome; segment 18/24
          Length = 283050

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   tcatcgatggcaagcaggtt 300
             ||||||||||||||||||||
Sbjct: 53436 tcatcgatggcaagcaggtt 53417
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>ref|NM_198132.2| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3
           (Hnrpa3), mRNA
          Length = 2608

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 396 aagaagatttttgttggtgg 415
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>gb|AC018499.3| Homo sapiens chromosome 3 clone RP11-267L16 map 3p, complete sequence
          Length = 198444

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gggctctccaggcagacaag 128
             ||||||||||||||||||||
Sbjct: 57484 gggctctccaggcagacaag 57465
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>ref|NM_062835.2| Caenorhabditis elegans CPEB polyA binding family member (cpb-2)
           (cpb-2) mRNA, complete cds
          Length = 1766

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 tttttgttggtggattgcct 381
           ||||||||||||||||||||
Sbjct: 759 tttttgttggtggattgcct 778
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>dbj|AP000041.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 12/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    gtcccctccggccctcgcttcccc 37
             |||| |||||||||||||||||||
Sbjct: 55549 gtcctctccggccctcgcttcccc 55572
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>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence
          Length = 88292

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ctcgcttccccaaccaccag 46
             ||||||||||||||||||||
Sbjct: 73298 ctcgcttccccaaccaccag 73317
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>ref|XM_344132.2| PREDICTED: Rattus norvegicus similar to Hnrpa3 protein (LOC363971),
           mRNA
          Length = 741

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 310 aagaagatttttgttggtgg 329
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>ref|XM_238069.3| PREDICTED: Rattus norvegicus similar to Hnrpa3 protein (LOC292273),
           mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 356 aagaagatttttgttggtgg 375
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>ref|XM_574918.1| PREDICTED: Rattus norvegicus similar to Hnrpa3 protein (LOC499592),
           mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 310 aagaagatttttgttggtgg 329
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>ref|XM_237842.3| PREDICTED: Rattus norvegicus similar to heterogeneous nuclear
           ribonucleoprotein A3 (LOC288146), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 aagaagatttttgttggtgg 374
           ||||||||||||||||||||
Sbjct: 407 aagaagatttttgttggtgg 426
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>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence
          Length = 219044

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    cagaggctttggatttatta 232
              ||||||||||||||||||||
Sbjct: 158126 cagaggctttggatttatta 158145
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>emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in linkage group 20,
             complete sequence
          Length = 159939

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   cagaggctttggatttatta 232
             ||||||||||||||||||||
Sbjct: 91917 cagaggctttggatttatta 91898
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>emb|AL954213.1| Pan troglodytes chromosome 22 clone RP43-040C07 map 22q22.11, complete
             sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    gtcccctccggccctcgcttcccc 37
             |||| |||||||||||||||||||
Sbjct: 37836 gtcctctccggccctcgcttcccc 37859
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>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
              sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     gtcccctccggccctcgcttcccc 37
              |||| |||||||||||||||||||
Sbjct: 191302 gtcctctccggccctcgcttcccc 191325
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>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0686H11
          Length = 135273

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 466   accaaccggtcacgaggatttggatttatagt 497
             ||||| || |||||||| ||||||||||||||
Sbjct: 49600 accaagcgttcacgaggctttggatttatagt 49569
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>dbj|AK100101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I20, full
           insert sequence
          Length = 1874

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 466 accaaccggtcacgaggatttggatttatagt 497
           ||||| || |||||||| ||||||||||||||
Sbjct: 502 accaagcgttcacgaggctttggatttatagt 533
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>dbj|AK071053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078J08, full
           insert sequence
          Length = 1440

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 466 accaaccggtcacgaggatttggatttatagt 497
           ||||| || |||||||| ||||||||||||||
Sbjct: 503 accaagcgttcacgaggctttggatttatagt 534
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>dbj|AK060178.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-A05, full
           insert sequence
          Length = 1399

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 466 accaaccggtcacgaggatttggatttatagt 497
           ||||| || |||||||| ||||||||||||||
Sbjct: 460 accaagcgttcacgaggctttggatttatagt 491
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>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
             complete sequence
          Length = 236784

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   cagaggctttggatttatta 232
             ||||||||||||||||||||
Sbjct: 53909 cagaggctttggatttatta 53890
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>gb|AF053720.1|AF053720 Canine calicivirus RNA polymerase gene, partial cds; capsid protein
            precursor, gene, complete cds; and unknown gene
          Length = 3794

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  ttcttttcaaagtttggaaa 431
            ||||||||||||||||||||
Sbjct: 1177 ttcttttcaaagtttggaaa 1158
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>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     gtcccctccggccctcgcttcccc 37
              |||| |||||||||||||||||||
Sbjct: 320699 gtcctctccggccctcgcttcccc 320722
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>gb|U20948.1|ITU20948 Ipomoea trifida receptor protein kinase (IRK1) mRNA, complete cds
          Length = 3249

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 202  acccaaaagcccagaggctttggattta 229
            ||||||||||||| |||||| |||||||
Sbjct: 1411 acccaaaagcccacaggcttgggattta 1438
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>gb|AC018502.6| Homo sapiens chromosome 3 clone RP11-327H17 map 3p, complete sequence
          Length = 198459

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   gggctctccaggcagacaag 128
             ||||||||||||||||||||
Sbjct: 57493 gggctctccaggcagacaag 57474
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>dbj|AB070225.1| Canine calicivirus orf1, orf2, orf3 genes for non-structural
            polyprotein, capsid protein precursor, hypothetical
            protein, complete cds
          Length = 8513

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 412  ttcttttcaaagtttggaaa 431
            ||||||||||||||||||||
Sbjct: 5896 ttcttttcaaagtttggaaa 5877
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>dbj|AP000287.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:Q77A10, complete sequence
          Length = 22275

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   gtcccctccggccctcgcttcccc 37
            |||| |||||||||||||||||||
Sbjct: 8314 gtcctctccggccctcgcttcccc 8337
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>dbj|AP000185.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 12/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    gtcccctccggccctcgcttcccc 37
             |||| |||||||||||||||||||
Sbjct: 61525 gtcctctccggccctcgcttcccc 61548
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>dbj|AP000109.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 12/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    gtcccctccggccctcgcttcccc 37
             |||| |||||||||||||||||||
Sbjct: 61525 gtcctctccggccctcgcttcccc 61548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,317,479
Number of Sequences: 3902068
Number of extensions: 5317479
Number of successful extensions: 99370
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99109
Number of HSP's gapped (non-prelim): 259
length of query: 530
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 507
effective length of database: 17,143,297,704
effective search space: 8691651935928
effective search space used: 8691651935928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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