ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33p21 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 247 bits (631), Expect = 8e-66 Identities = 114/131 (87%), Positives = 126/131 (96%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+KVG+YVDVKVNGA+HKGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 400 TGR+WNVTKRA+GVE+NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK KND+LKA AK Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120 Query: 401 ARGEVISTKRQ 433 A GE ISTKRQ Sbjct: 121 ANGETISTKRQ 131
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 159 bits (403), Expect = 2e-39 Identities = 80/131 (61%), Positives = 100/131 (76%), Gaps = 1/131 (0%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 MP +G R+RTR LFAR F+ G + L+TYL +K+GEYVDV N AVHKGMP K+YHGR Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 400 TG VWNVTKRAIGVEINK+V +RII+KRIHVR++HV+ S C + F R +ND++K +A Sbjct: 61 TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120 Query: 401 -ARGEVISTKR 430 A+ V STKR Sbjct: 121 VAKLPVPSTKR 131
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 155 bits (392), Expect = 4e-38 Identities = 73/131 (55%), Positives = 96/131 (73%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 M HG RSRTR +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 400 TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 401 ARGEVISTKRQ 433 A+G + KRQ Sbjct: 121 AQGVAVQLKRQ 131
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 154 bits (390), Expect = 7e-38 Identities = 72/131 (54%), Positives = 100/131 (76%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 400 TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 401 ARGEVISTKRQ 433 A+G+ + +RQ Sbjct: 121 AQGKTVQLRRQ 131
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 154 bits (390), Expect = 7e-38 Identities = 72/131 (54%), Positives = 100/131 (76%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 400 TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 401 ARGEVISTKRQ 433 A+G+ + +RQ Sbjct: 121 AQGKTVQLRRQ 131
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 154 bits (389), Expect = 9e-38 Identities = 72/131 (54%), Positives = 96/131 (73%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 M HG RSRTR +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 400 TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 401 ARGEVISTKRQ 433 A+G + KRQ Sbjct: 121 AQGVAVQLKRQ 131
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 146 bits (368), Expect = 2e-35 Identities = 68/126 (53%), Positives = 91/126 (72%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 415 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 416 ISTKRQ 433 + KRQ Sbjct: 125 VQLKRQ 130
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 145 bits (365), Expect = 5e-35 Identities = 67/126 (53%), Positives = 91/126 (72%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G R TR +F+RP+RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 415 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 416 ISTKRQ 433 + KRQ Sbjct: 125 VQLKRQ 130
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 144 bits (362), Expect = 1e-34 Identities = 67/125 (53%), Positives = 90/125 (72%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 415 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 416 ISTKR 430 + KR Sbjct: 125 VQLKR 129
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 141 bits (355), Expect = 8e-34 Identities = 66/126 (52%), Positives = 89/126 (70%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 415 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 416 ISTKRQ 433 + Q Sbjct: 125 VQLNGQ 130
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 131 bits (330), Expect = 6e-31 Identities = 61/121 (50%), Positives = 85/121 (70%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 GLR TR +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++ Sbjct: 5 GLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIF 64 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 415 NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R ND+ + AK+ G+ Sbjct: 65 NVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQP 124 Query: 416 I 418 + Sbjct: 125 V 125
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 128 bits (321), Expect = 7e-30 Identities = 62/127 (48%), Positives = 82/127 (64%), Gaps = 7/127 (5%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 MP +G RTR LF RPFR G +T L TYKVG+YV + N ++ G+P+K +HG+ Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKV-------KND 379 TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK +N Sbjct: 61 TGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNI 120 Query: 380 QLKAEAK 400 QLK E K Sbjct: 121 QLKKEGK 127
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 121 bits (304), Expect = 6e-28 Identities = 57/122 (46%), Positives = 86/122 (70%) Frame = +2 Query: 68 RTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 247 R D+F++ FR++G IPL YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ Sbjct: 8 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQ 67 Query: 248 RAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTK 427 A+G+ +NKQV RII KRI+VR+EH++ S+ F R +N++ + EA+ + ++ K Sbjct: 68 HAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLK 127 Query: 428 RQ 433 RQ Sbjct: 128 RQ 129
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 114 bits (285), Expect = 1e-25 Identities = 54/126 (42%), Positives = 87/126 (69%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G R TR LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV+ Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVY 64 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 415 +V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R + ++ +A++RG V Sbjct: 65 DVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVV 124 Query: 416 ISTKRQ 433 ++ ++ Sbjct: 125 LAPSKR 130
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 78.2 bits (191), Expect = 8e-15 Identities = 34/57 (59%), Positives = 42/57 (73%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTG 226 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 74.7 bits (182), Expect = 9e-14 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 G RS+TR L + R+KG IP L+ + Y GEYV VK+N ++HKGMPH+ YHG+ G V Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV 66 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 334 V KR E+ +G++ + + VR EH+ P Sbjct: 67 --VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 70.1 bits (170), Expect = 2e-12 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 2/106 (1%) Frame = +2 Query: 47 AGHGLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHK-GMPHKFYHGR 220 A G R+RTR L +P R+KG IP L+TYLR Y+VG+ V + +N + GMPH+ +HG Sbjct: 4 APRGYRNRTRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGL 63 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 358 TG V V KR E+ +G + RK + V H++P A E R Sbjct: 64 TGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 66.2 bits (160), Expect = 3e-11 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 G R+RTR L + R++G +P L+ + +K G+YV +K+N +VHKGMPH+ YHG+ G + Sbjct: 7 GYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVI 66 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 328 KR + +G++ K I VR EH+ Sbjct: 67 QG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 65.9 bits (159), Expect = 4e-11 Identities = 36/94 (38%), Positives = 56/94 (59%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G R +TR ++ R++G P+T LR +K GEYV + ++ +VHKGMPH +HGRTG V Sbjct: 7 GFRRKTRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVV 66 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPS 337 RA V++ G + K+I +H++P+ Sbjct: 67 GKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 62.0 bits (149), Expect = 6e-10 Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 G R+R+R L + R++G +P L+ + YK G+ V VK+N +VH+GMPH+ Y G+ G++ Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI 66 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 334 + KR ++ +G++ K I VR EH+ P Sbjct: 67 --IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 62.0 bits (149), Expect = 6e-10 Identities = 37/98 (37%), Positives = 54/98 (55%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G RSRTR + R++G PL + ++ G+ V + ++ +VHKGMPH YHGRTG V Sbjct: 7 GFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVV 66 Query: 236 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAE 349 RA V+I G + K++ V EH++P E Sbjct: 67 GRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 60.8 bits (146), Expect = 1e-09 Identities = 32/96 (33%), Positives = 53/96 (55%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 H R +TR + R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 60.8 bits (146), Expect = 1e-09 Identities = 32/96 (33%), Positives = 53/96 (55%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 H R +TR + R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 60.1 bits (144), Expect = 2e-09 Identities = 31/96 (32%), Positives = 55/96 (57%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 H R +TR ++ R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 V KR + + G+++ K + + H++P + Sbjct: 66 --VGKRGEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 58.5 bits (140), Expect = 7e-09 Identities = 36/100 (36%), Positives = 54/100 (54%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 M G RS+TR + R+KG PLT L+ Y G+ V V ++ +V KGMPH +HG+ Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 TG V V +R + + G + K I R +H++ S+ Sbjct: 61 TGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 58.2 bits (139), Expect = 9e-09 Identities = 31/96 (32%), Positives = 52/96 (54%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 H R +TR ++ R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 V KR + G ++ K + H++P + Sbjct: 66 --VGKRGDAYIVQITDGGKV--KTFFIHPVHLRPQK 97
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 54.7 bits (130), Expect = 9e-08 Identities = 30/97 (30%), Positives = 54/97 (55%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 M G RS+TR + R P+T ++++ G+ V + ++ ++H+G PH +HG+ Sbjct: 1 MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGK 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 331 TGRV + ++ V + GN+ K++ VR EH+Q Sbjct: 61 TGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 52.4 bits (124), Expect = 5e-07 Identities = 32/94 (34%), Positives = 52/94 (55%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 HG R ++ + R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V Sbjct: 6 HGFRFKSGRKLRKKVREKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVV 64 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 334 RA V++ G ++ K + VR EH++P Sbjct: 65 IGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 49.7 bits (117), Expect = 3e-06 Identities = 31/94 (32%), Positives = 49/94 (52%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 HG R +TR L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V Sbjct: 6 HGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTV 65 Query: 233 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 334 + RA +E +G++ +K I EH++P Sbjct: 66 VGIRGRAYVIE--TFLGDK--KKIIITTPEHLKP 95
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/100 (26%), Positives = 53/100 (53%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 M HG + TR + R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGEKRCTRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGS 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 TG+V R+ +E+ GN + K + +H++P + Sbjct: 61 TGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHLKPQK 96
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 46.6 bits (109), Expect = 3e-05 Identities = 28/94 (29%), Positives = 47/94 (50%) Frame = +2 Query: 50 GHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGR 229 G G R +TRD ++ R++G + +T L+ + + V + + + H GMPH YHG G Sbjct: 6 GKGFRRKTRDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGT 65 Query: 230 VWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 331 V V KR E+ + +K + V H++ Sbjct: 66 V--VGKRGNCYEVELEFNGE--KKLLIVHPAHLK 95
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 44.7 bits (104), Expect = 1e-04 Identities = 26/100 (26%), Positives = 53/100 (53%) Frame = +2 Query: 41 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 220 M HG R TR + R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGERRCTRYKLQKTVRERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGF 60 Query: 221 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 340 TG+V + +R + + GN + K + +H++P + Sbjct: 61 TGKV--IGQRGRSYILAVREGNSM--KEVFSVPQHLKPQK 96
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 44.3 bits (103), Expect = 1e-04 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = +2 Query: 89 RPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAV 184 RPFRK G +PL+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Frame = +2 Query: 56 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 235 G RS +R + + + KG + ++T++VG+ + +N AV GMPH + G TG + Sbjct: 7 GPRSGSRRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVIT 66 Query: 236 NVTKRAIGVEINKQVGN---RIIRKRIHVR 316 + + ++ +VGN ++I +H+R Sbjct: 67 GM--QGSCYILSFKVGNVEKKVIAAPVHLR 94
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 34.7 bits (78), Expect = 0.10 Identities = 16/60 (26%), Positives = 32/60 (53%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 HG RS +R + ++ + +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSAEERKRSVIGRFMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>RL21_THEVO (Q97BZ1) 50S ribosomal protein L21e| Length = 98 Score = 32.7 bits (73), Expect = 0.38 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +2 Query: 53 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 232 HG RS +R + ++ + ++ + G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSKEERKKSIIGRMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIV 65 Query: 233 WNVTKRA--IGVEINKQVGNRIIRKRIHVR 316 +GV++ + +I +H++ Sbjct: 66 EGAQGNCYKVGVKVG-SLTKYVIASPVHLK 94
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 Query: 284 NRIIRKRIHVRVEHVQPSRCAEEFRLR 364 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 29.6 bits (65), Expect = 3.2 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -1 Query: 124 GERDVTLLPEGAREQVARPRPQTMARRHPAPPA 26 GER+ LLP G+R+Q ++ +P+ + P A Sbjct: 623 GEREPGLLPYGSRDQTSKDKPKVKTKGRPRAAA 655
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 393 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 268 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211
>ZN691_HUMAN (Q5VV52) Zinc finger protein 691| Length = 312 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 284 NRIIRKRIHVRVEHVQPSRCAEEFRLR 364 NRI +RIH+ +H + +C E FR R Sbjct: 157 NRIRHERIHLEEKHYKCPKCQESFRRR 183
>YAE1_SCHPO (Q09842) Hypothetical PWWP domain protein C23D3.01| Length = 407 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%) Frame = +2 Query: 65 SRTRDLFARPFRKKG----YIPLTTYLRTYKVGEYVDVKVN 175 S T++L R +KKG Y+P T+ ++YK GEYV K++ Sbjct: 34 SNTKNL--RDVKKKGKQLAYVPRTSPRKSYKNGEYVLAKMS 72
>LEPA_THETN (Q8RB72) GTP-binding protein lepA| Length = 603 Score = 28.1 bits (61), Expect = 9.4 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 11/120 (9%) Frame = +2 Query: 98 RKKGYIPLTTYLRTYKVGEYV--DVKVNGAVHKGMP---HKFYHGRTGRVW------NVT 244 R +GY L + YK + V D+ VNG V + HK GR N+ Sbjct: 466 RTRGYASLDYEFKGYKKSDLVKLDILVNGEVVDALSMIVHKDKAYEKGRKIVEKLKENIP 525 Query: 245 KRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVIST 424 + + I +G+RII + + ++C RK K + + E K R I T Sbjct: 526 RHLFEIPIQAAIGSRIIARETVKALRKNVLAKCYGGDVTRKKKLLEKQKEGKKRMRQIGT 585
>VP40_EHV2 (P52369) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein] Length = 643 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 103 LPEGAREQVARPRPQTMARRHPAPPALFRVAAA 5 LP+ + A+P+PQ + +PAPP F AA Sbjct: 491 LPQPQLQPQAQPQPQPAPQLYPAPPQAFYHPAA 523
>RNPA_STRA5 (Q8E1E7) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 109 Score = 28.1 bits (61), Expect = 9.4 Identities = 8/25 (32%), Positives = 18/25 (72%) Frame = +2 Query: 254 IGVEINKQVGNRIIRKRIHVRVEHV 328 +G+ ++K++GN ++R I ++ HV Sbjct: 42 VGISVSKKLGNAVVRNAIKRKIRHV 66
>RNPA_STRA3 (Q8E6W5) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 109 Score = 28.1 bits (61), Expect = 9.4 Identities = 8/25 (32%), Positives = 18/25 (72%) Frame = +2 Query: 254 IGVEINKQVGNRIIRKRIHVRVEHV 328 +G+ ++K++GN ++R I ++ HV Sbjct: 42 VGISVSKKLGNAVVRNAIKRKIRHV 66
>RNPA_COREF (Q8FSU8) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 133 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 215 GRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 328 G G V + G+ ++K VGN +IR R R+ HV Sbjct: 44 GEKGEVASFGGPRFGLIVSKAVGNAVIRHRTSRRLRHV 81
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 1 LSPPPPETKQEEQDAGGPWSAVADARPVRAPLP 99 L PPPP + P+S A++RP R PLP Sbjct: 542 LPPPPPPDR--------PYSVGAESRPQRRPLP 566 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,936,995 Number of Sequences: 219361 Number of extensions: 1108917 Number of successful extensions: 3887 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3632 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3871 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
