| Clone Name | bags34e08 |
|---|---|
| Clone Library Name | barley_pub |
>ACON_GRAVE (P49609) Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3)| (Citrate hydro-lyase) (Aconitase) Length = 779 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = -3 Query: 523 IEGADAADLVVPKPFGLPWTFCEAPKITGIRRTPRL 416 + GADA D++V GLPW +APK+ G++ T +L Sbjct: 206 VGGADAVDVMV----GLPWEL-KAPKVIGVKLTGKL 236
>SYV_ZYMMO (Q5NLA8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 884 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Frame = +1 Query: 7 LVKYKHHFVVSGGS--FMWRS---LQRLEFQHSLPFPDLYLH 117 L +Y + ++SG F W + +Q L F +PFP LYLH Sbjct: 479 LGRYPNDVLISGFDILFFWDARMIMQGLHFMKDVPFPKLYLH 520
>Y583_THET8 (P68591) UPF0340 protein TTHA0583 (TT1679)| Length = 196 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +3 Query: 276 LPVRLSTNRITELVQLRDITRPVILAGSKASVTQAMQRAERYRTELLKR 422 +P+RLS +I E V L TRP ++ G++A T R E+LK+ Sbjct: 148 VPLRLSVRKIGEAVLLAAKTRPKLVGGARAVYT---------REEMLKK 187
>Y214_THET2 (Q72L49) UPF0340 protein TT_C0214| Length = 196 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +3 Query: 276 LPVRLSTNRITELVQLRDITRPVILAGSKASVTQAMQRAERYRTELLKR 422 +P+RLS +I E V L TRP ++ G++A T R E+LK+ Sbjct: 148 VPLRLSVRKIGEAVLLAAKTRPKLVGGARAVYT---------REEMLKK 187
>WNT5B_ORYLA (O42122) Protein Wnt-5b precursor| Length = 371 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Frame = -3 Query: 289 RRTGNLERVSLREIFVICSSSFLFSQTNKATSTTIPPI------LMAAFPAVSRKSG 137 RRTG++ + L F+ C+S L N S + PI ++ A P S+ SG Sbjct: 9 RRTGDVRHLLLAAAFLTCNSQLLLVDANSWWSLGLTPIQRPEMYIIGAQPLCSQLSG 65
>CSX2_SCHPO (Q9UUE2) Protein csx2| Length = 870 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/80 (22%), Positives = 34/80 (42%) Frame = +3 Query: 219 NKKEEEQITNISRNETLSRLPVRLSTNRITELVQLRDITRPVILAGSKASVTQAMQRAER 398 N Q+ N+S++ S+ N E +QLR+ P++ + +T Q Sbjct: 24 NDNASLQVHNVSKSPEYSKYSYSRKNNEPIEFIQLREEEGPIVKVEEEDGLTLRFQL--E 81 Query: 399 YRTELLKRGVLLIPVIFGAS 458 + + KR V + ++G S Sbjct: 82 FHAQEGKRDVTNLTCVYGTS 101
>HYLP2_BPH45 (Q54699) Hyaluronoglucosaminidase (EC 3.2.1.35) (Hyaluronidase)| Length = 337 Score = 29.3 bits (64), Expect = 7.9 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +3 Query: 450 GASQKVQGKPKGFGTTRSAASAPSIGGDFEK 542 G++ +++G K GT + PSIG D++K Sbjct: 210 GSAMQLRGSEKALGTLKITHENPSIGADYDK 240
>HAL3A_ARATH (Q9SWE5) Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36)| (Halotolerance protein Hal3a) (AtHal3a) (PPCDC) (AtCoaC) Length = 209 Score = 29.3 bits (64), Expect = 7.9 Identities = 20/69 (28%), Positives = 36/69 (52%) Frame = +3 Query: 240 ITNISRNETLSRLPVRLSTNRITELVQLRDITRPVILAGSKASVTQAMQRAERYRTELLK 419 I +S N TL ++ L N +T +++ D T+P+ +A + ++ ER+ L + Sbjct: 102 IAPLSAN-TLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDE 160 Query: 420 RGVLLIPVI 446 G+ LIP I Sbjct: 161 LGITLIPPI 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,143,889 Number of Sequences: 219361 Number of extensions: 1666361 Number of successful extensions: 4786 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4780 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)