ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags34e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 662 0.0
2dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 662 0.0
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
4dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
5ref|NM_193993.1| Oryza sativa (japonica cultivar-group), predic... 246 7e-62
6ref|NM_100172.2| Arabidopsis thaliana unknown protein AT1G02910 ... 72 2e-09
7emb|BX815720.1|CNS0ADV7 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
8emb|BX813549.1|CNS0ADM3 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
9gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 geno... 56 1e-04
10emb|BX816140.1|CNS0ADB7 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
11emb|AL359313.11| Human DNA sequence from clone RP1-321C2 on chro... 44 0.48
12gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park C... 44 0.48
13gb|AY744675.1| Homo sapiens matrix metalloproteinase 10 (stromel... 42 1.9
14gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosom... 42 1.9
15ref|XM_649970.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box h... 42 1.9
16gb|AF525010.1| Acacia galpinii psbA gene, partial sequence; psbA... 42 1.9
17gb|AF524971.1| Enterolobium contortisiliquum psbA gene, partial ... 42 1.9
18gb|AF524970.1| Ebenopsis ebano psbA gene, partial sequence; psbA... 42 1.9
19emb|Z99111.2|BSUB0008 Bacillus subtilis complete genome (section... 42 1.9
20emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k1... 42 1.9
21gb|AF012285.1|AF012285 Bacillus subtilis mobA-nprE gene region 42 1.9
22gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 42 1.9
23dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 1.9
24dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 1.9
25gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete... 40 7.5
26gb|BC094614.1| Mus musculus profilin family, member 4, mRNA (cDN... 40 7.5
27gb|AC079274.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.5
28gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.5
29gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 7.5
30gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosom... 40 7.5
31gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosom... 40 7.5
32gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, compl... 40 7.5
33ref|XM_503978.1| Yarrowia lipolytica CLIB122, YALI0E15334g predi... 40 7.5
34emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chr... 40 7.5
35emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2 40 7.5
36gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 7.5
37gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, comp... 40 7.5
38gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.5
39gb|AC020687.6| Homo sapiens chromosome 15, clone RP11-648K4, com... 40 7.5
40gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.5
41gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, c... 40 7.5
42gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, c... 40 7.5
43dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
44ref|NM_211718.1| Eremothecium gossypii AGL010Wp (AGL010W), mRNA 40 7.5
45gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 ... 40 7.5
46gb|AF052173.1|AF052173 Homo sapiens clone 24417 mRNA sequence 40 7.5
47emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 7.5
48gb|S48551.1|S48551 {tandem repeat P1 monomer} [Cacatua goffini=g... 40 7.5 
>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full
            insert sequence
          Length = 1683

 Score =  662 bits (334), Expect = 0.0
 Identities = 496/550 (90%)
 Strand = Plus / Plus

                                                                        
Query: 6    attagtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcatt 65
            ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 597  attagtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaact 656

                                                                        
Query: 66   gcagcggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggt 125
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 657  gcagcagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggt 716

                                                                        
Query: 126  ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
            || |||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||
Sbjct: 717  ggcgatggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggt 776

                                                                        
Query: 186  attgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagattaca 245
            |||||||||||||||||||| | | ||||||||||||||||||||||  ||||||| |||
Sbjct: 777  attgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagatcaca 836

                                                                        
Query: 246  aatatctctcgtaatgaaaccctttcaaggttacctgtgcgtctgtcaaccaatcgcata 305
             | || ||||| |||||||||||||||||||||||||| || ||||||||||||||||| 
Sbjct: 837  caaatttctcgcaatgaaaccctttcaaggttacctgtccgcctgtcaaccaatcgcatt 896

                                                                        
Query: 306  actgaacttgtgcaactccgggacattactaggccagttatattggcaggttcaaaagca 365
            | ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 897  attgagcttgtgcaactccgggacattactaggccagttatactggcaggttcaaaagca 956

                                                                        
Query: 366  tctgttactcaagcaatgcaaagagctgagaggtaccgaactgaactgctcaaacgaggc 425
            ||  |||||| ||||||||||||||||||||| || || ||||||||||| |||||||| 
Sbjct: 957  tccattactcgagcaatgcaaagagctgagagatatcggactgaactgctgaaacgaggt 1016

                                                                        
Query: 426  gttcttctaattcctgtgatctttggtgcttcacaaaaagtccaaggcaaaccaaaaggc 485
            |||||||||||||||||||||||||||||||| || |||| |||| | || |||| ||||
Sbjct: 1017 gttcttctaattcctgtgatctttggtgcttctcagaaagcccaaagtaagccaagaggc 1076

                                                                        
Query: 486  ttcggtactacaagatctgctgcatcagctccttcaattgggggcgactttgaaaaacgt 545
            || || | | |||||||||||||||||||||||||| ||||||  |||||||| || |||
Sbjct: 1077 tttggaagttcaagatctgctgcatcagctccttcagttggggatgactttgagaagcgt 1136

                      
Query: 546  actgaatcta 555
            ||||||||||
Sbjct: 1137 actgaatcta 1146
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>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full
            insert sequence
          Length = 1542

 Score =  662 bits (334), Expect = 0.0
 Identities = 496/550 (90%)
 Strand = Plus / Plus

                                                                        
Query: 6    attagtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcatt 65
            ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 599  attagtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaact 658

                                                                        
Query: 66   gcagcggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggt 125
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 659  gcagcagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggt 718

                                                                        
Query: 126  ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
            || |||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||
Sbjct: 719  ggcgatggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggt 778

                                                                        
Query: 186  attgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagattaca 245
            |||||||||||||||||||| | | ||||||||||||||||||||||  ||||||| |||
Sbjct: 779  attgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagatcaca 838

                                                                        
Query: 246  aatatctctcgtaatgaaaccctttcaaggttacctgtgcgtctgtcaaccaatcgcata 305
             | || ||||| |||||||||||||||||||||||||| || ||||||||||||||||| 
Sbjct: 839  caaatttctcgcaatgaaaccctttcaaggttacctgtccgcctgtcaaccaatcgcatt 898

                                                                        
Query: 306  actgaacttgtgcaactccgggacattactaggccagttatattggcaggttcaaaagca 365
            | ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 899  attgagcttgtgcaactccgggacattactaggccagttatactggcaggttcaaaagca 958

                                                                        
Query: 366  tctgttactcaagcaatgcaaagagctgagaggtaccgaactgaactgctcaaacgaggc 425
            ||  |||||| ||||||||||||||||||||| || || ||||||||||| |||||||| 
Sbjct: 959  tccattactcgagcaatgcaaagagctgagagatatcggactgaactgctgaaacgaggt 1018

                                                                        
Query: 426  gttcttctaattcctgtgatctttggtgcttcacaaaaagtccaaggcaaaccaaaaggc 485
            |||||||||||||||||||||||||||||||| || |||| |||| | || |||| ||||
Sbjct: 1019 gttcttctaattcctgtgatctttggtgcttctcagaaagcccaaagtaagccaagaggc 1078

                                                                        
Query: 486  ttcggtactacaagatctgctgcatcagctccttcaattgggggcgactttgaaaaacgt 545
            || || | | |||||||||||||||||||||||||| ||||||  |||||||| || |||
Sbjct: 1079 tttggaagttcaagatctgctgcatcagctccttcagttggggatgactttgagaagcgt 1138

                      
Query: 546  actgaatcta 555
            ||||||||||
Sbjct: 1139 actgaatcta 1148
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  248 bits (125), Expect = 2e-62
 Identities = 167/181 (92%)
 Strand = Plus / Minus

                                                                            
Query: 6        attagtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcatt 65
                ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 14493181 attagtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaact 14493122

                                                                            
Query: 66       gcagcggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggt 125
                ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 14493121 gcagcagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggt 14493062

                                                                            
Query: 126      ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
                || |||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||
Sbjct: 14493061 ggcgatggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggt 14493002

                 
Query: 186      a 186
                |
Sbjct: 14493001 a 14493001



 Score =  206 bits (104), Expect = 6e-50
 Identities = 149/164 (90%)
 Strand = Plus / Minus

                                                                            
Query: 182      aggtattgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagat 241
                |||||||||||||||||||||||| | | ||||||||||||||||||||||  |||||||
Sbjct: 14492154 aggtattgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagat 14492095

                                                                            
Query: 242      tacaaatatctctcgtaatgaaaccctttcaaggttacctgtgcgtctgtcaaccaatcg 301
                 ||| | || ||||| |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 14492094 cacacaaatttctcgcaatgaaaccctttcaaggttacctgtccgcctgtcaaccaatcg 14492035

                                                            
Query: 302      cataactgaacttgtgcaactccgggacattactaggccagtta 345
                ||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 14492034 cattattgagcttgtgcaactccgggacattactaggccagtta 14491991



 Score =  204 bits (103), Expect = 2e-49
 Identities = 166/187 (88%)
 Strand = Plus / Minus

                                                                            
Query: 342      gttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgagaggtac 401
                |||||| |||||||||||||||||||  |||||| ||||||||||||||||||||| || 
Sbjct: 14491877 gttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgagagatat 14491818

                                                                            
Query: 402      cgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgcttcacaa 461
                || ||||||||||| |||||||| |||||||||||||||||||||||||||||||| || 
Sbjct: 14491817 cggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgcttctcag 14491758

                                                                            
Query: 462      aaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagctccttca 521
                |||| |||| | || |||| |||||| || | | ||||||||||||||||||||||||||
Sbjct: 14491757 aaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagctccttca 14491698

                       
Query: 522      attgggg 528
                 ||||||
Sbjct: 14491697 gttgggg 14491691



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       tcttttatgtggcgttcatt 65
                ||||||||||||||||||||
Sbjct: 29973941 tcttttatgtggcgttcatt 29973922
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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score =  248 bits (125), Expect = 2e-62
 Identities = 167/181 (92%)
 Strand = Plus / Minus

                                                                         
Query: 6     attagtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcatt 65
             ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 52494 attagtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaact 52435

                                                                         
Query: 66    gcagcggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggt 125
             ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 52434 gcagcagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggt 52375

                                                                         
Query: 126   ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
             || |||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||
Sbjct: 52374 ggcgatggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggt 52315

              
Query: 186   a 186
             |
Sbjct: 52314 a 52314



 Score =  206 bits (104), Expect = 6e-50
 Identities = 149/164 (90%)
 Strand = Plus / Minus

                                                                         
Query: 182   aggtattgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagat 241
             |||||||||||||||||||||||| | | ||||||||||||||||||||||  |||||||
Sbjct: 51467 aggtattgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagat 51408

                                                                         
Query: 242   tacaaatatctctcgtaatgaaaccctttcaaggttacctgtgcgtctgtcaaccaatcg 301
              ||| | || ||||| |||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 51407 cacacaaatttctcgcaatgaaaccctttcaaggttacctgtccgcctgtcaaccaatcg 51348

                                                         
Query: 302   cataactgaacttgtgcaactccgggacattactaggccagtta 345
             ||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 51347 cattattgagcttgtgcaactccgggacattactaggccagtta 51304



 Score =  204 bits (103), Expect = 2e-49
 Identities = 166/187 (88%)
 Strand = Plus / Minus

                                                                         
Query: 342   gttatattggcaggttcaaaagcatctgttactcaagcaatgcaaagagctgagaggtac 401
             |||||| |||||||||||||||||||  |||||| ||||||||||||||||||||| || 
Sbjct: 51190 gttatactggcaggttcaaaagcatccattactcgagcaatgcaaagagctgagagatat 51131

                                                                         
Query: 402   cgaactgaactgctcaaacgaggcgttcttctaattcctgtgatctttggtgcttcacaa 461
             || ||||||||||| |||||||| |||||||||||||||||||||||||||||||| || 
Sbjct: 51130 cggactgaactgctgaaacgaggtgttcttctaattcctgtgatctttggtgcttctcag 51071

                                                                         
Query: 462   aaagtccaaggcaaaccaaaaggcttcggtactacaagatctgctgcatcagctccttca 521
             |||| |||| | || |||| |||||| || | | ||||||||||||||||||||||||||
Sbjct: 51070 aaagcccaaagtaagccaagaggctttggaagttcaagatctgctgcatcagctccttca 51011

                    
Query: 522   attgggg 528
              ||||||
Sbjct: 51010 gttgggg 51004
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>ref|NM_193993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 813

 Score =  246 bits (124), Expect = 7e-62
 Identities = 166/180 (92%)
 Strand = Plus / Plus

                                                                       
Query: 6   attagtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcatt 65
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct: 472 attagtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaact 531

                                                                       
Query: 66  gcagcggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggt 125
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 532 gcagcagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggt 591

                                                                       
Query: 126 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
           || |||||||| || ||| | |||||||| | ||||||||||||||| ||||||||||||
Sbjct: 592 ggcgatggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggt 651



 Score =  147 bits (74), Expect = 4e-32
 Identities = 107/118 (90%)
 Strand = Plus / Plus

                                                                       
Query: 353 aggttcaaaagcatctgttactcaagcaatgcaaagagctgagaggtaccgaactgaact 412
           |||||||||||||||  |||||| ||||||||||||||||||||| || || ||||||||
Sbjct: 648 aggttcaaaagcatccattactcgagcaatgcaaagagctgagagatatcggactgaact 707

                                                                     
Query: 413 gctcaaacgaggcgttcttctaattcctgtgatctttggtgcttcacaaaaagtccaa 470
           ||| |||||||| |||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 708 gctgaaacgaggtgttcttctaattcctgtgatctttggtgcttctcagaaagcccaa 765
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>ref|NM_100172.2| Arabidopsis thaliana unknown protein AT1G02910 mRNA, complete cds
          Length = 1557

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 126 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 708 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 767

                   
Query: 186 attgttgt 193
           ||||||||
Sbjct: 768 attgttgt 775
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>emb|BX815720.1|CNS0ADV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZA05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1574

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 126 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 725 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 784

                   
Query: 186 attgttgt 193
           ||||||||
Sbjct: 785 attgttgt 792
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>emb|BX813549.1|CNS0ADM3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB23ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1514

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 126 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 696 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 755

                   
Query: 186 attgttgt 193
           ||||||||
Sbjct: 756 attgttgt 763
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>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
             sequence
          Length = 100239

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 126   ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 185
             ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 35593 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 35652
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>emb|BX816140.1|CNS0ADB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZC04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1492

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 126 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggag 183
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||
Sbjct: 672 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggag 729
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>emb|AL359313.11| Human DNA sequence from clone RP1-321C2 on chromosome 6 Contains part
             of novel gene, complete sequence
          Length = 52461

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 229   aagaagagcagattacaaatat 250
             ||||||||||||||||||||||
Sbjct: 22746 aagaagagcagattacaaatat 22767
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>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177115

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 460   aaaaagtccaaggcaaaccaaaaggc 485
             ||||||| ||||||||||||||||||
Sbjct: 15229 aaaaagtacaaggcaaaccaaaaggc 15254
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>gb|AY744675.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10)
            gene, complete cds
          Length = 13828

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 202  ctttatttgtctgggaaaacaagaaagaa 230
            ||||||||| ||| |||||||||||||||
Sbjct: 1101 ctttatttggctgagaaaacaagaaagaa 1129
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>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence
          Length = 162530

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   cttgcacttcaaggtggtgat 131
             |||||||||||||||||||||
Sbjct: 60272 cttgcacttcaaggtggtgat 60292
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>ref|XM_649970.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative
            (37.t00031) partial mRNA
          Length = 1995

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 373  ctcaagcaatgcaaagagctg 393
            |||||||||||||||||||||
Sbjct: 1025 ctcaagcaatgcaaagagctg 1045
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>gb|AF525010.1| Acacia galpinii psbA gene, partial sequence; psbA-trnH intergenic
           spacer, complete sequence; and tRNA-His (trnH) gene,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 487

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  atttcaacattctttaccatt 98
           |||||||||||||||||||||
Sbjct: 186 atttcaacattctttaccatt 206
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>gb|AF524971.1| Enterolobium contortisiliquum psbA gene, partial sequence;
           psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
           genes for chloroplast products
          Length = 483

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  atttcaacattctttaccatt 98
           |||||||||||||||||||||
Sbjct: 187 atttcaacattctttaccatt 207
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>gb|AF524970.1| Ebenopsis ebano psbA gene, partial sequence; psbA-trnH intergenic
           spacer, complete sequence; and tRNA-His (trnH) gene,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 454

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  atttcaacattctttaccatt 98
           |||||||||||||||||||||
Sbjct: 186 atttcaacattctttaccatt 206
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>emb|Z99111.2|BSUB0008 Bacillus subtilis complete genome (section 8 of 21): from 1410943 to
              1602922
          Length = 191980

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 219    aacaagaaagaagaagagcagatta 243
              ||||||||| |||||||||||||||
Sbjct: 101500 aacaagaaaaaagaagagcagatta 101524
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>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE
          Length = 132450

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    tttcaacattctttaccattc 99
             |||||||||||||||||||||
Sbjct: 98223 tttcaacattctttaccattc 98203
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>gb|AF012285.1|AF012285 Bacillus subtilis mobA-nprE gene region
          Length = 46864

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 219   aacaagaaagaagaagagcagatta 243
             ||||||||| |||||||||||||||
Sbjct: 18238 aacaagaaaaaagaagagcagatta 18262
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>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    ctggaaacggctgggaatgct 167
              |||||||||||||||||||||
Sbjct: 108998 ctggaaacggctgggaatgct 108978
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>dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-75I23, complete
             sequence
          Length = 118818

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 202   ctttatttgtctgggaaaacaagaaagaa 230
             ||||||||| ||| |||||||||||||||
Sbjct: 82252 ctttatttggctgagaaaacaagaaagaa 82224
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>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete
             sequence
          Length = 103181

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 202   ctttatttgtctgggaaaacaagaaagaa 230
             ||||||||| ||| |||||||||||||||
Sbjct: 33030 ctttatttggctgagaaaacaagaaagaa 33002
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>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence
          Length = 186002

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gaaagaagaagagcagatta 243
             ||||||||||||||||||||
Sbjct: 64689 gaaagaagaagagcagatta 64708
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>gb|BC094614.1| Mus musculus profilin family, member 4, mRNA (cDNA clone
            IMAGE:6852241), with apparent retained intron
          Length = 4800

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 209  tgtctgggaaaacaagaaagaagaagag 236
            ||||| ||||||||| ||||||||||||
Sbjct: 2925 tgtctcggaaaacaaaaaagaagaagag 2952
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>gb|AC079274.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-142L8, complete
             sequence
          Length = 113724

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   gagcagattacaaatatctc 253
             ||||||||||||||||||||
Sbjct: 98663 gagcagattacaaatatctc 98682
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>gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-15K8, complete
            sequence
          Length = 253000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  gagcagattacaaatatctc 253
            ||||||||||||||||||||
Sbjct: 6173 gagcagattacaaatatctc 6192
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 77      aatttcaacattctttacca 96
               ||||||||||||||||||||
Sbjct: 1620363 aatttcaacattctttacca 1620344
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>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete sequence
          Length = 211336

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    gggaaaacaagaaagaagaa 233
              ||||||||||||||||||||
Sbjct: 190564 gggaaaacaagaaagaagaa 190583
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>gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosome 15, complete
             sequence
          Length = 176561

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gggaaaacaagaaagaagaa 233
             ||||||||||||||||||||
Sbjct: 14730 gggaaaacaagaaagaagaa 14749
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>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence
          Length = 208152

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    gtgctccagattttctggaa 152
              ||||||||||||||||||||
Sbjct: 150919 gtgctccagattttctggaa 150900
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>ref|XM_503978.1| Yarrowia lipolytica CLIB122, YALI0E15334g predicted mRNA
          Length = 6225

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  agcaatgcaaagagctgaga 396
            ||||||||||||||||||||
Sbjct: 2733 agcaatgcaaagagctgaga 2714
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>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33
             Contains the 5' end of a novel gene and the 3' end of a
             novel gene, complete sequence
          Length = 176422

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   gctccagattttctggaaac 154
             ||||||||||||||||||||
Sbjct: 42405 gctccagattttctggaaac 42386
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>emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2
          Length = 37467

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gaaagaagaagagcagatta 243
             ||||||||||||||||||||
Sbjct: 27973 gaaagaagaagagcagatta 27992
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    caaagagctgagaggtaccg 403
              ||||||||||||||||||||
Sbjct: 318472 caaagagctgagaggtaccg 318453
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>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence
          Length = 245991

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    ttcaaaagcatctgttactc 375
              ||||||||||||||||||||
Sbjct: 105128 ttcaaaagcatctgttactc 105109
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    caagatctgctgcatcagct 515
              ||||||||||||||||||||
Sbjct: 887434 caagatctgctgcatcagct 887453
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>gb|AC020687.6| Homo sapiens chromosome 15, clone RP11-648K4, complete sequence
          Length = 169571

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 371    tactcaagcaatgcaaagag 390
              ||||||||||||||||||||
Sbjct: 135243 tactcaagcaatgcaaagag 135262
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    agatctgctgcatcagctcc 517
              ||||||||||||||||||||
Sbjct: 702860 agatctgctgcatcagctcc 702841
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>gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, complete sequence
          Length = 70000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   aagaagaagagcagattaca 245
             ||||||||||||||||||||
Sbjct: 60996 aagaagaagagcagattaca 60977
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>gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, complete sequence
          Length = 195613

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    aagaagaagagcagattaca 245
              ||||||||||||||||||||
Sbjct: 189864 aagaagaagagcagattaca 189883
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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0480C01
          Length = 151100

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     tcttttatgtggcgttcatt 65
              ||||||||||||||||||||
Sbjct: 118499 tcttttatgtggcgttcatt 118480
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>ref|NM_211718.1| Eremothecium gossypii AGL010Wp (AGL010W), mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 agatctgctgcatcagctcc 517
           ||||||||||||||||||||
Sbjct: 70  agatctgctgcatcagctcc 51
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>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete
              sequence
          Length = 203546

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    gaaagaagaagagcagatta 243
              ||||||||||||||||||||
Sbjct: 115241 gaaagaagaagagcagatta 115222
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>gb|AF052173.1|AF052173 Homo sapiens clone 24417 mRNA sequence
          Length = 1545

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  aagaagaagagcagattaca 245
            ||||||||||||||||||||
Sbjct: 1071 aagaagaagagcagattaca 1052
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 377     agcaatgcaaagagctgaga 396
               ||||||||||||||||||||
Sbjct: 1824545 agcaatgcaaagagctgaga 1824564
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>gb|S48551.1|S48551 {tandem repeat P1 monomer} [Cacatua goffini=goffins cockatoo,
           Genomic, 195 nt]
          Length = 195

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 ggaaaacaagaaagaagaag 234
           ||||||||||||||||||||
Sbjct: 14  ggaaaacaagaaagaagaag 33


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,378,751
Number of Sequences: 3902068
Number of extensions: 5378751
Number of successful extensions: 138527
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138286
Number of HSP's gapped (non-prelim): 241
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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