ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33o24 |
|---|---|
| Clone Library Name | barley_pub |
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 108 bits (271), Expect = 9e-24 Identities = 50/68 (73%), Positives = 56/68 (82%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 568 P + KTN +GTLNMLGLAKR+GA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CY Sbjct: 172 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 Query: 569 DEGKRTAE 592 DEGKR AE Sbjct: 232 DEGKRVAE 239
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 108 bits (271), Expect = 9e-24 Identities = 50/68 (73%), Positives = 56/68 (82%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 568 P + KTN +GTLNMLGLAKR+GA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CY Sbjct: 172 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 Query: 569 DEGKRTAE 592 DEGKR AE Sbjct: 232 DEGKRVAE 239
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 108 bits (271), Expect = 9e-24 Identities = 50/68 (73%), Positives = 56/68 (82%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 568 P + KTN +GTLNMLGLAKR+GA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CY Sbjct: 172 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 Query: 569 DEGKRTAE 592 DEGKR AE Sbjct: 232 DEGKRVAE 239
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 108 bits (271), Expect = 9e-24 Identities = 50/68 (73%), Positives = 56/68 (82%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 568 P + KTN +GTLNMLGLAKR+GA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CY Sbjct: 172 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 231 Query: 569 DEGKRTAE 592 DEGKR AE Sbjct: 232 DEGKRVAE 239
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 108 bits (271), Expect = 9e-24 Identities = 50/68 (73%), Positives = 56/68 (82%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 568 P + KTN +GTLNMLGLAKR+GA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CY Sbjct: 173 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACY 232 Query: 569 DEGKRTAE 592 DEGKR AE Sbjct: 233 DEGKRVAE 240
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 108 bits (270), Expect = 1e-23 Identities = 50/68 (73%), Positives = 56/68 (82%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY 568 P + KTN +GTLNMLGLAKR+GA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CY Sbjct: 170 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACY 229 Query: 569 DEGKRTAE 592 DEGKR AE Sbjct: 230 DEGKRVAE 237
>GAL10_YEAST (P04397) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 699 Score = 35.8 bits (81), Expect = 0.095 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 6/61 (9%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIG-AKFLLTSTSEVYGDPLQHPQV-----ETYWGNVNPI 550 P R++ N++GT+ +L L ++ +KF+ +S++ VYGD + P + E G NP Sbjct: 104 PLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPY 163 Query: 551 G 553 G Sbjct: 164 G 164
>EXOB_RHILT (Q59745) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 327 Score = 35.0 bits (79), Expect = 0.16 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAK-FLLTSTSEVYGDPLQHPQVETY-WGNVNPIG 553 P +++ NV+GTL +L A+ G F+ +ST YG P P ET+ +NP G Sbjct: 88 PVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVPINPYG 144
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 34.3 bits (77), Expect = 0.28 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFL-LTSTSEVYG 496 P + N+VG+ NML LAK I K L L STS +YG Sbjct: 96 PKAYVDANLVGSWNMLELAKAIAPKHLMLASTSSIYG 132
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 33.9 bits (76), Expect = 0.36 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +2 Query: 404 KTNVVGTLNMLGLAKRIG-AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 580 +TNV GT +L A R G A F+ ST EVYG L+H W P+ S Y K Sbjct: 100 RTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYSASK 154 Query: 581 RTAE 592 + + Sbjct: 155 ASGD 158
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 33.5 bits (75), Expect = 0.47 Identities = 20/44 (45%), Positives = 25/44 (56%) Frame = +2 Query: 368 NGLCDP*PSRWHKTNVVGTLNMLGLAKRIGAKFLLTSTSEVYGD 499 N L DP P + TN VGT +L A++ +F ST EVYGD Sbjct: 90 NSLKDPSPFIY--TNFVGTYILLEAARKYDIRFHHVSTDEVYGD 131
>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| Length = 328 Score = 33.5 bits (75), Expect = 0.47 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGA-KFLLTSTSEVYGDPLQHPQVETY-WGNVNPIG 553 P+ ++ NV+GTL +L A G F+ +ST YG P P E++ +NP G Sbjct: 88 PAAFYDNNVIGTLTLLSAALAAGIDAFVFSSTCATYGLPDSVPMDESHKQAPINPYG 144
>GALE_ERWAM (P35673) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 337 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGA-KFLLTSTSEVYGDPLQHPQVET--YWGNVNPIG 553 P +++ NV GTL +L + G +F+ +S++ VYG P VET G +P G Sbjct: 93 PLEYYQNNVTGTLVLLEEMRSAGVNQFIFSSSATVYGADAPVPYVETTPIGGTTSPYG 150
>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 32.7 bits (73), Expect = 0.81 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +2 Query: 416 VGTLNMLGLAKRIG----AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 580 VGTL +L K G KF STSE+YG + PQ ET P RS Y K Sbjct: 130 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAK 183
>QA1S_NEUCR (P11637) Quinate repressor| Length = 919 Score = 32.3 bits (72), Expect = 1.1 Identities = 27/81 (33%), Positives = 39/81 (48%) Frame = -1 Query: 592 FSCTLALVVATPDTDGVDIAPVGLHLRVLEGITVDLASAGEEELGTDPLGQSKHVECTNH 413 F+ LAL V+ GVDI + + + +E I DLA++ E T PL Sbjct: 312 FTYALALPVSALLDKGVDIQELDVGVDAIEIIVDDLATS--ESGPTSPL----------- 358 Query: 412 IGLVPSRRSRITQTISERRRN 350 GL P R S I++ + E RR+ Sbjct: 359 -GLAPHRASEISRVVGEIRRD 378
>GMDS_MOUSE (Q8K0C9) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +2 Query: 416 VGTLNMLGLAKRIG----AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 580 VGTL +L K G KF STSE+YG + PQ ET P RS Y K Sbjct: 130 VGTLRLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAK 183
>GMDS_CRIGR (Q8K3X3) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) (GMD) Length = 372 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +2 Query: 416 VGTLNMLGLAKRIG----AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 580 VGTL +L K G KF STSE+YG + PQ ET P RS Y K Sbjct: 130 VGTLRLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAK 183
>GALE3_ARATH (Q9T0A7) Probable UDP-glucose 4-epimerase At4g23920 (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 350 Score = 31.2 bits (69), Expect = 2.3 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLL-TSTSEVYGDPLQHPQVETYWGNVNPIGVRSC 565 P ++ N+VGT+ +L + + G K L+ +S++ VYG P + P E +PI + Sbjct: 98 PLLYYNNNIVGTVTLLEVMAQYGCKNLVFSSSATVYGWPKEVPCTEE-----SPISATNP 152 Query: 566 YDEGK 580 Y K Sbjct: 153 YGRTK 157
>UBIG_BORBR (Q7WGT9) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 241 Score = 30.8 bits (68), Expect = 3.1 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = -1 Query: 577 ALVVATPDTDGVDIAPVGLHLRVLEG----ITVDLASAGEEELGTDPLGQSKHVECTNHI 410 ++ VA G+D+A L + L G + VD + EEL T+ GQ V C + Sbjct: 75 SMAVAGAQVTGIDLAEKSLKIARLHGLESGVKVDYRAVPVEELATEQPGQYDVVTCMEML 134 Query: 409 GLVPSRRS 386 VP S Sbjct: 135 EHVPDPAS 142
>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 334 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLG-LAKRIGAKFLLTSTSEVYGDPLQHPQVET 526 P +++ NV+GT +L + + K + +ST+ YG+P+Q P E+ Sbjct: 85 PIEYYENNVIGTHTLLKKMLEHDVKKIVFSSTAATYGEPVQIPIQES 131
>POLG_CRPV (P13418) Genome polyprotein (Fragment)| Length = 895 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Frame = +3 Query: 321 QPSYYYYDAILRLLSEMVCVILDLRDGTRP-------MWLVHS-TCLDWPRGSVPSSSSP 476 Q YYYY S + ++ + +DGT W V L S+ S+SS Sbjct: 725 QFDYYYYLYAFWRGSMRIKMVAETQDGTGTPRKKTNFTWFVRMFNSLQDSFNSLISTSSS 784 Query: 477 ALARSTVIPSSTLRWRPTGAMSTPSVSGV 563 A+ +TV+PS T+ P+ + P+V G+ Sbjct: 785 AVT-TTVLPSGTINMGPSTQVIDPTVEGL 812
>RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 30.0 bits (66), Expect = 5.2 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 10/52 (19%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLA----------KRIGAKFLLTSTSEVYGDPLQHP 514 P+ + +TN+VGT +L +A K+ +F ST EVYGD L HP Sbjct: 93 PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGD-LPHP 143
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +3 Query: 402 TRPMWLVHSTCLDWPRGSVPSSSSPALARSTVIPSSTLRWRPTGAMSTPSVS 557 T P+W+ +T +V SS P + + ++T + TG+M+TPS S Sbjct: 3828 TPPVWISTTTTPTTSGSTVTPSSIPGTTHTPTVLTTTTQPVATGSMATPSSS 3879 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 402 TRPMWLVHSTCLDWPRGSVPSSSSPALARSTVIPSSTLRWRPTGAMSTPSVS 557 T P+W+ +T +V SS P + + ++T TG+M+TPS S Sbjct: 3299 TPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSS 3350 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 402 TRPMWLVHSTCLDWPRGSVPSSSSPALARSTVIPSSTLRWRPTGAMSTPSVS 557 T P+W+ +T +V SS P + + ++T TG+M+TPS S Sbjct: 2601 TPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSS 2652 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +3 Query: 393 RDGTRPMWLVHSTCLDWPRGSVPSSSSPALARSTVIPSSTLRWRPTGAMSTPSVS 557 R T P+W+ +T +V SS P + + ++T TG+M+TPS S Sbjct: 2069 RARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSS 2123
>GM4D1_VIBCH (Q06952) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) Length = 373 Score = 29.6 bits (65), Expect = 6.8 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +2 Query: 410 NVVGTLNMLGLAKRIG----AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEG 577 + +GTL +L + +G KF STSE+YG + PQ ET P RS Y Sbjct: 107 DAIGTLRLLEAIRFLGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVA 161 Query: 578 KRTA 589 K A Sbjct: 162 KMYA 165
>GM4D2_VIBCH (Q56598) Probable GDP-mannose 4,6-dehydratase (EC 4.2.1.47)| (GDP-D-mannose dehydratase) Length = 372 Score = 29.6 bits (65), Expect = 6.8 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +2 Query: 410 NVVGTLNMLGLAKRIG----AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEG 577 + +GTL +L + +G KF STSE+YG + PQ ET P RS Y Sbjct: 106 DAMGTLRLLEAIRLLGLEKTTKFYQASTSELYGLVQETPQKET-----TPFYPRSPYAVA 160 Query: 578 KRTA 589 K A Sbjct: 161 KMYA 164
>XRN2_HUMAN (Q9H0D6) 5'-3' exoribonuclease 2 (EC 3.1.11.-) (DHM1-like protein)| (DHP protein) Length = 950 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +2 Query: 50 CGICRPVVHFTL*SSSNRRREKGRRKQLALCLDLVE-MWS*LNSHIKRVQLKREIQVGAV 226 CG+C H R +KG+ +LA L E + L ++ R L+RE+ + ++ Sbjct: 263 CGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASL 322 Query: 227 PFS 235 PF+ Sbjct: 323 PFT 325
>SEPT1_HUMAN (Q8WYJ6) Septin-1 (LARP) (Serologically defined breast cancer| antigen NY-BR-24) Length = 367 Score = 29.3 bits (64), Expect = 8.9 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 547 GVDIAPVGLHLR-VLEGITVDLASAGEEELGTDPLGQSKHVECTNHIGLVPSRRSRITQT 371 G P LH + V +G L AGE LG L S + VP +R+TQT Sbjct: 7 GFAALPNQLHRKSVKKGFDFTLMVAGESGLGKSTLINSLFLTNLYEDRQVPEASARLTQT 66 Query: 370 ISERRRNI 347 ++ RR + Sbjct: 67 LAIERRGV 74
>GAL10_KLULA (P09609) GAL10 bifunctional protein [Includes: UDP-glucose| 4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase)] Length = 688 Score = 29.3 bits (64), Expect = 8.9 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Frame = +2 Query: 389 PSRWHKTNVVGTLNMLGLAKRIGAKFLL-TSTSEVYGDPLQH----PQVETY-WGNVNPI 550 P ++ N+VGT+N+L K K L+ +S++ VYGD + P ET G NP Sbjct: 97 PLTYYFNNIVGTINLLECMKSHDVKKLVFSSSATVYGDATRFENMIPIPETCPTGPTNPY 156 Query: 551 G 553 G Sbjct: 157 G 157
>FA8A1_HUMAN (Q9UBU6) Protein FAM8A1 (Autosomal highly conserved protein)| Length = 413 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Frame = -2 Query: 438 PSMLSVPTTLVLCHLEGQGSHRPFPKEDAIXXXXXXXXXVRVKPPK--RWLQKYATGRSC 265 PS+ PTT V C + + P +++PP+ R + A+G Sbjct: 26 PSLRGPPTTAVPCPRDDPQAEPQAPGRPTAPGLAAAAAADKLEPPRELRKRGEAASGSGA 85 Query: 264 EVSSKQSCLAEKGTAP 217 E+ + C A + AP Sbjct: 86 ELQEQAGCEAPEAAAP 101
>UTRO_HUMAN (P46939) Utrophin (Dystrophin-related protein 1) (DRP1) (DRP)| Length = 3433 Score = 29.3 bits (64), Expect = 8.9 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +2 Query: 92 SSNRRREKGRRKQLALCLDLVEMWS*LNSHIKRVQLKREIQVGAVP 229 S+ R K RR Q ALCLDL+E+ S N K+ +L + Q+ +VP Sbjct: 2861 SAYRTAIKIRRLQKALCLDLLEL-STTNEIFKQHKLNQNDQLLSVP 2905 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,562,962 Number of Sequences: 219361 Number of extensions: 1811830 Number of successful extensions: 4783 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4579 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4781 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
