ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags34d18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G11, full insert sequence Length = 1638 Score = 444 bits (224), Expect = e-121 Identities = 398/456 (87%) Strand = Plus / Plus Query: 142 ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 201 |||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||| Sbjct: 197 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 256 Query: 202 ggccctcatgtctttgaagcctgaactttttgaaggtttgaggtttgattttacaaagat 261 |||||||||||| ||||| ||||||||||||||||| ||||||||||| || || || Sbjct: 257 ggccctcatgtcgttgaaacctgaactttttgaaggattgaggtttgacttcactaaagg 316 Query: 262 gttaacccagaagtttgctcttagccatagtgtccttatgggctccctggaagttccatc 321 |||| |||||||| | || ||||| ||||| ||||||| ||| | ||||||||||| Sbjct: 317 attaaatcagaagttctcactcagccacagtgtttttatgggttccttagaagttccatc 376 Query: 322 tcagtcagctgatgttataaaagtcccaacatcacagtatgaatttggtgccaacttttt 381 ||||||| |||| ||||||||| ||||||||||| || ||||| |||||||| ||| | Sbjct: 377 tcagtcaactgaaactataaaagttccaacatcacattacgaattcggtgccaattttat 436 Query: 382 agatccaaagttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgt 441 ||||||||||||||| ||| | |||||| ||||||| |||||||| |||||||||||||| Sbjct: 437 agatccaaagttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgt 496 Query: 442 gaaatgtgatctgacagagaatctcgcgctgaaaataaatgcgcagcttactagcgagcc 501 |||||||||||||||||| |||| | |||||||||||||| ||||||||| ||||| Sbjct: 497 gaaatgtgatctgacagatgatcttactctgaaaataaatgcacagcttactcatgagcc 556 Query: 502 tcattactctcaagggatgttcaactttgactacaagggcacagactaccgagcacagtt 561 |||||||| ||||| ||||| ||||||||||||||||| |||||||||||||| || || Sbjct: 557 gcattactcccaaggaatgtttaactttgactacaaggggacagactaccgagctcaatt 616 Query: 562 tcaaattggaaataatgcgttctatggggcaaatta 597 |||||||||||||||||||||||||||||||||||| Sbjct: 617 tcaaattggaaataatgcgttctatggggcaaatta 652
>gb|BT018673.1| Zea mays clone EL01N0510E07.d mRNA sequence Length = 1429 Score = 381 bits (192), Expect = e-102 Identities = 441/524 (84%) Strand = Plus / Plus Query: 74 gcgccgccgtatgggcatgggctcgccggcatcctccctccgaagtcggatggggatgat 133 |||||||| || |||| ||||||||||| |||||||| | || |||| | ||||| || Sbjct: 110 gcgccgccctacgggcccgggctcgccgggatcctcccgcagatgtcgaagggggaggag 169 Query: 134 aagaaggaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatc 193 |||||||| ||||||||||||||||||||||| || ||||||||||| | |||||||||| Sbjct: 170 aagaaggatgagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatc 229 Query: 194 cagcgcgaggccctcatgtctttgaagcctgaactttttgaaggtttgaggtttgatttt 253 ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| || Sbjct: 230 cagcgcgaggctctcatgtctttgaagcctgaactttttgaaggattgagatttgtcttc 289 Query: 254 acaaagatgttaacccagaagtttgctcttagccatagtgtccttatgggctccctggaa 313 ||||| || | ||||||||| |||||||||| || | ||||||||||| | ||| Sbjct: 290 acaaaaggattgaatcagaagttttctcttagccacagcatttttatgggctccttagaa 349 Query: 314 gttccatctcagtcagctgatgttataaaagtcccaacatcacagtatgaatttggtgcc 373 |||||| | ||| || |||| ||| ||||| ||||| |||| ||||||||||| ||| Sbjct: 350 gttccagcccaggcatctgaaactattaaagttccaactgcacattatgaatttggcgcc 409 Query: 374 aactttttagatccaaagttaatgcttatcggaaggttgatgactgatggaaggctgaat 433 || ||||||||||||||||||||||| || |||||| ||||||| ||||||||||| ||| Sbjct: 410 aattttttagatccaaagttaatgctcattggaagggtgatgacagatggaaggcttaat 469 Query: 434 gctcgtgtgaaatgtgatctgacagagaatctcgcgctgaaaataaatgcgcagcttact 493 |||||||||||||||||| ||||||| ||||| || ||||| ||||||| |||||||| Sbjct: 470 gctcgtgtgaaatgtgatttgacagacaatctgacgttgaaagtaaatgcacagcttacc 529 Query: 494 agcgagcctcattactctcaagggatgttcaactttgactacaagggcacagactaccga 553 ||| | |||||||| ||||||||||| ||||| ||||||||||| | ||||| ||| Sbjct: 530 caagaggcacattactcacaagggatgtttaacttcgactacaagggaagtgactatcga 589 Query: 554 gcacagtttcaaattggaaataatgcgttctatggggcaaatta 597 ||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 590 gcacaattccaaattgggaacaatgcattctatggtgcaaatta 633
>gb|AY109381.1| Zea mays CL3204_1 mRNA sequence Length = 1476 Score = 226 bits (114), Expect = 7e-56 Identities = 337/414 (81%), Gaps = 1/414 (0%) Strand = Plus / Minus Query: 184 cgaggagatccagcgcgaggccctcatgtctttgaagcctgaactttttgaaggtttgag 243 ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| Sbjct: 1238 cgaggagatccagcgcgaggctctcatgtctttgaagcctgaacnnnnngaaggattgag 1179 Query: 244 gtttgattttacaaagatgttaacccagaagtttgctcttagccatagtgtccttatggg 303 |||||| || ||||| || | || |||||| |||||||||| || ||||||| Sbjct: 1178 gtttgacttcacaaaaggattgaatcaaaagttttctcttagccacagcanttttatggg 1119 Query: 304 ctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcacagtatga 363 |||| | ||||||||| | ||| || |||| ||| ||||| ||||| |||| ||||| Sbjct: 1118 ctccttagaagttccagcccaggcatctgaaactattaaagttccaactgcacattatga 1059 Query: 364 atttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgactgatgg 423 ||||| ||||| |||||||||||||||||| || |||||| ||||||| ||||| Sbjct: 1058 -tttggcgccaannnnnnagatccaaagttaatgctcattggaagggtgatgacagatgg 1000 Query: 424 aaggctgaatgctcgtgtgaaatgtgatctgacagagaatctcgcgctgaaaataaatgc 483 |||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||||||| Sbjct: 999 aaggcttaatgctcgtgtgaaatgtgatttgacagacaatctgacgttgaaagtaaatgc 940 Query: 484 gcagcttactagcgagcctcattactctcaagggatgttcaactttgactacaagggcac 543 |||||||| ||| | |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 939 acagcttacccaagaggcacattactcacaagggatgtttaacttcgactacaagggaag 880 Query: 544 agactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatta 597 ||||| |||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 879 tgactatcgagcacaattccaaattgggaacaatgcattctatggtgcaaatta 826
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 142 ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 201 |||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||| Sbjct: 11715910 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 11715969 Query: 202 ggccctca 209 |||||||| Sbjct: 11715970 ggccctca 11715977 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 390 agttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgtgaaatgtg 449 ||||||| ||| | |||||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 11717546 agttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgtgaaatgtg 11717605 Query: 450 atctgacagagaatctcgcgctgaaaataaatgc 483 |||||||||| |||| | |||||||||||||| Sbjct: 11717606 atctgacagatgatcttactctgaaaataaatgc 11717639 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 537 agggcacagactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatt 596 |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 11717920 aggggacagactaccgagctcaatttcaaattggaaataatgcgttctatggggcaaatt 11717979 Query: 597 a 597 | Sbjct: 11717980 a 11717980 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 297 ttatgggctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcac 356 ||||||| ||| | |||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 11717369 ttatgggttccttagaagttccatctcagtcaactgaaactataaaagttccaacatcac 11717428 Query: 357 agtatgaatttggtgccaactttttagatccaaag 391 | || ||||| |||||||| ||| ||||||||||| Sbjct: 11717429 attacgaattcggtgccaattttatagatccaaag 11717463 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaaggtttgaggtttga 249 |||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 11717211 tgtcgttgaaacctgaactttttgaaggattgaggtttga 11717250 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 497 gagcctcattactctcaagggatgttcaactttgactacaagg 539 ||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 11717738 gagccgcattactcccaaggaatgtttaactttgactacaagg 11717780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 21689897 gcagcgccgccaccgccttct 21689877
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 142 ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 201 |||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||| Sbjct: 105005 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 105064 Query: 202 ggccctca 209 |||||||| Sbjct: 105065 ggccctca 105072 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 390 agttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgtgaaatgtg 449 ||||||| ||| | |||||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 106641 agttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgtgaaatgtg 106700 Query: 450 atctgacagagaatctcgcgctgaaaataaatgc 483 |||||||||| |||| | |||||||||||||| Sbjct: 106701 atctgacagatgatcttactctgaaaataaatgc 106734 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 537 agggcacagactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatt 596 |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 107015 aggggacagactaccgagctcaatttcaaattggaaataatgcgttctatggggcaaatt 107074 Query: 597 a 597 | Sbjct: 107075 a 107075 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 297 ttatgggctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcac 356 ||||||| ||| | |||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 106464 ttatgggttccttagaagttccatctcagtcaactgaaactataaaagttccaacatcac 106523 Query: 357 agtatgaatttggtgccaactttttagatccaaag 391 | || ||||| |||||||| ||| ||||||||||| Sbjct: 106524 attacgaattcggtgccaattttatagatccaaag 106558 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaaggtttgaggtttga 249 |||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 106306 tgtcgttgaaacctgaactttttgaaggattgaggtttga 106345 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 497 gagcctcattactctcaagggatgttcaactttgactacaagg 539 ||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 106833 gagccgcattactcccaaggaatgtttaactttgactacaagg 106875
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 142 ggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgcga 201 |||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||| Sbjct: 11712673 ggagaaggtggactacctcaacctcccctgccccgtgcccttcgaggagatccagcgcga 11712732 Query: 202 ggccctca 209 |||||||| Sbjct: 11712733 ggccctca 11712740 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 390 agttaatgcttatcggaaggttgatgactgatggaaggctgaatgctcgtgtgaaatgtg 449 ||||||| ||| | |||||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 11714309 agttaattcttgtaggaagggtgatgacagatggaagactgaatgctcgtgtgaaatgtg 11714368 Query: 450 atctgacagagaatctcgcgctgaaaataaatgc 483 |||||||||| |||| | |||||||||||||| Sbjct: 11714369 atctgacagatgatcttactctgaaaataaatgc 11714402 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 537 agggcacagactaccgagcacagtttcaaattggaaataatgcgttctatggggcaaatt 596 |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 11714683 aggggacagactaccgagctcaatttcaaattggaaataatgcgttctatggggcaaatt 11714742 Query: 597 a 597 | Sbjct: 11714743 a 11714743 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 297 ttatgggctccctggaagttccatctcagtcagctgatgttataaaagtcccaacatcac 356 ||||||| ||| | |||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 11714132 ttatgggttccttagaagttccatctcagtcaactgaaactataaaagttccaacatcac 11714191 Query: 357 agtatgaatttggtgccaactttttagatccaaag 391 | || ||||| |||||||| ||| ||||||||||| Sbjct: 11714192 attacgaattcggtgccaattttatagatccaaag 11714226 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaaggtttgaggtttga 249 |||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 11713974 tgtcgttgaaacctgaactttttgaaggattgaggtttga 11714013 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 497 gagcctcattactctcaagggatgttcaactttgactacaagg 539 ||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 11714501 gagccgcattactcccaaggaatgtttaactttgactacaagg 11714543 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 21682926 gcagcgccgccaccgccttct 21682906
>ref|NM_188090.1| Oryza sativa (japonica cultivar-group), Ozsa8522 predicted mRNA Length = 873 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 140 gaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgc 199 |||||||||||||||||| | ||||| || |||||||| || |||||||||||||||||| Sbjct: 127 gaggagaaggtggactacatgaacctcccctgccccgtcccctacgaggagatccagcgc 186 Query: 200 gaggccctcatgtctttgaagcc 222 |||||| ||||||| ||||||| Sbjct: 187 gaggccttcatgtcgctgaagcc 209
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 140 gaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgc 199 |||||||||||||||||| | ||||| || |||||||| || |||||||||||||||||| Sbjct: 9674597 gaggagaaggtggactacatgaacctcccctgccccgtcccctacgaggagatccagcgc 9674538 Query: 200 gaggcc 205 |||||| Sbjct: 9674537 gaggcc 9674532 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gatgataagaaggaggagaaggtg 151 |||||||||||| ||||||||||| Sbjct: 41106712 gatgataagaagaaggagaaggtg 41106689
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 140 gaggagaaggtggactacctcaacctaccttgccccgtgccgtacgaggagatccagcgc 199 |||||||||||||||||| | ||||| || |||||||| || |||||||||||||||||| Sbjct: 112600 gaggagaaggtggactacatgaacctcccctgccccgtcccctacgaggagatccagcgc 112541 Query: 200 gaggcc 205 |||||| Sbjct: 112540 gaggcc 112535
>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence Length = 107448 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaagg 237 |||||||||||||||||||||||||||| Sbjct: 106470 tgtctttgaagcctgaactttttgaagg 106497
>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence Length = 122819 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaagg 237 |||||||||||||||||||||||||||| Sbjct: 78538 tgtctttgaagcctgaactttttgaagg 78565 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaaggtttgaggtttgattt 252 |||||||||||||||| |||||||| |||||| | |||||||| Sbjct: 99668 tgtctttgaagcctgagctttttgagggtttgcgttttgattt 99710
>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence Length = 99712 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 210 tgtctttgaagcctgaactttttgaagg 237 |||||||||||||||||||||||||||| Sbjct: 96522 tgtctttgaagcctgaactttttgaagg 96549
>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence Length = 151594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 210 tgtctttgaagcctgaactttttgaagg 237 |||||||||||||||||||||||||||| Sbjct: 73057 tgtctttgaagcctgaactttttgaagg 73030 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 210 tgtctttgaagcctgaactttttgaaggtttgaggtttgattt 252 |||||||||||||||| |||||||| |||||| | |||||||| Sbjct: 51928 tgtctttgaagcctgagctttttgagggtttgcgttttgattt 51886
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 35 gcgccgccaccgccttctccagcg 58 |||||||||||||||||||||||| Sbjct: 738668 gcgccgccaccgccttctccagcg 738645
>gb|AC158988.3| Mus musculus BAC clone RP23-393E16 from chromosome 14, complete sequence Length = 209710 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 121 ggatggggatgataagaaggaggagaag 148 |||||||||||| ||||||||||||||| Sbjct: 97449 ggatggggatgagaagaaggaggagaag 97422
>gb|DQ459384.1| Nicotiana tabacum mitochondrial import receptor-like protein mRNA, partial cds; nuclear gene for mitochondrial product Length = 564 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 197 cgcgaggccctcatgtctttgaagcctgaactttttgaaggtttgaggtttgattttac 255 ||||| || ||||||||||| ||||| || ||||||||||| ||| | ||||| ||||| Sbjct: 139 cgcgaagctctcatgtctttaaagcccgagctttttgaaggattgcgttttgactttac 197 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 tttggtgccaactttttagatccaaagttaatgcttat 402 |||||||| |||||| ||||||||||| | |||||||| Sbjct: 307 tttggtgctaactttatagatccaaagatgatgcttat 344
>gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, complete sequence Length = 198570 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 agttccatctcagtcagctgat 334 |||||||||||||||||||||| Sbjct: 101983 agttccatctcagtcagctgat 102004
>ref|NM_112890.3| Arabidopsis thaliana TOM40; voltage-gated ion-selective channel AT3G20000 (TOM40) mRNA, complete cds Length = 1343 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 534 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 587 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 375 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 434 Query: 419 gatgg 423 ||||| Sbjct: 435 gatgg 439
>ref|XM_511490.1| PREDICTED: Pan troglodytes similar to JUP protein (LOC454667), mRNA Length = 3510 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 387 cgccgccaccgccttctccagc 366
>gb|AC166973.5| Mus musculus chromosome 1, clone RP24-372J6, complete sequence Length = 146400 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 agttccatctcagtcagctgat 334 |||||||||||||||||||||| Sbjct: 11303 agttccatctcagtcagctgat 11324
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 180 cgtacgaggagatccagcgcgaggccctcatgtc 213 |||| |||| |||||||||||||||| ||||||| Sbjct: 572404 cgtaggaggcgatccagcgcgaggccttcatgtc 572437
>gb|BC007942.2| Homo sapiens synaptonemal complex protein SC65, mRNA (cDNA clone MGC:14267 IMAGE:4130726), complete cds Length = 2028 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 524 cgccgccaccgccttctccagc 503
>gb|AY526388.1| Arachis hypogaea clone PM632 microsatellite sequence Length = 349 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 11 gccgcctccgccgcctccgacgcagcgccgccaccgcc 48 ||||||||||||||| ||| ||| || ||||||||||| Sbjct: 119 gccgcctccgccgccgccgccgccgccccgccaccgcc 156
>ref|NM_006455.2| Homo sapiens synaptonemal complex protein SC65 (SC65), mRNA Length = 2619 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 776 cgccgccaccgccttctccagc 755
>gb|AY117216.1| Arabidopsis thaliana putative membrane import protein (At3g20000) mRNA, complete cds Length = 961 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 439 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 492 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 280 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 339 Query: 419 gatgg 423 ||||| Sbjct: 340 gatgg 344
>gb|AY050925.1| Arabidopsis thaliana putative membrane import protein (At3g20000) mRNA, complete cds Length = 1329 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 504 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 557 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 345 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 404 Query: 419 gatgg 423 ||||| Sbjct: 405 gatgg 409
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 31 cgcagcgccgccaccgccttctccagcgca 60 ||||||| |||||||| ||||||||||||| Sbjct: 281591 cgcagcgacgccaccgacttctccagcgca 281562
>dbj|AK056085.1| Homo sapiens cDNA FLJ31523 fis, clone NT2RI2000282, highly similar to NUCLEOLAR AUTOANTIGEN NO55 Length = 2443 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 959 cgccgccaccgccttctccagc 938
>emb|BX824823.1|CNS0A5JY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1290 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 528 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 581 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 369 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 428 Query: 419 gatgg 423 ||||| Sbjct: 429 gatgg 433
>emb|BX824118.1|CNS0A5LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1026 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 232 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 285 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 73 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 132 Query: 419 gatgg 423 ||||| Sbjct: 133 gatgg 137
>emb|BX822251.1|CNS0A5UN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1301 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 534 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 587 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 375 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 434 Query: 419 gatgg 423 ||||| Sbjct: 435 gatgg 439
>emb|BX824709.1|CNS0A5IA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 518 atgttcaactttgactacaagggcacagactaccgagcacagtttcaaattgga 571 |||||||||||||| |||| ||| |||||||| |||| ||| ||||| ||||| Sbjct: 532 atgttcaactttgattacatgggatcagactacagagctcagcttcaacttgga 585 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 359 tatgaatttggtgccaactttttagatccaaagttaatgcttatcggaaggttgatgact 418 ||||| ||||||||||| | || || |||||||| |||| ||||||||| | |||||| Sbjct: 373 tatgagtttggtgccaattattatgacccaaagttgctgctcatcggaagggtaatgact 432 Query: 419 gatgg 423 ||||| Sbjct: 433 gatgg 437
>dbj|AK222945.1| Homo sapiens mRNA for synaptonemal complex protein SC65 variant, clone: HRC12667 Length = 1944 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 521 cgccgccaccgccttctccagc 500
>gb|AC084575.1|CBRG39N14 Caenorhabditis briggsae cosmid G39N14, complete sequence Length = 45027 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 ggatgataagaaggaggagaag 148 |||||||||||||||||||||| Sbjct: 17352 ggatgataagaaggaggagaag 17373
>gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, complete sequence Length = 178345 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 28489 cgccgccaccgccttctccagc 28510
>emb|AJ250583.1|HSA250583 Homo sapiens mRNA for nucleolar protein No55 (No55 gene) Length = 2079 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 577 cgccgccaccgccttctccagc 556
>gb|BC011701.2| Homo sapiens synaptonemal complex protein SC65, mRNA (cDNA clone MGC:19699 IMAGE:3510378), complete cds Length = 1736 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 508 cgccgccaccgccttctccagc 487
>gb|U47621.1|HSU47621 Homo sapiens nucleolar autoantigen No55 mRNA, complete cds Length = 2347 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 503 cgccgccaccgccttctccagc 482
>gb|BC001047.2| Homo sapiens synaptonemal complex protein SC65, mRNA (cDNA clone MGC:1322 IMAGE:3510406), complete cds Length = 1880 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagc 57 |||||||||||||||||||||| Sbjct: 529 cgccgccaccgccttctccagc 508
>gb|AC116810.14| Mus musculus chromosome 1, clone RP24-355J5, complete sequence Length = 147130 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 31486 gaagcctgaactttttgaagg 31466
>gb|DQ213345.1| Taeniopygia guttata clone 0063P0009E11 hypothetical protein FLJ10342-like mRNA, complete sequence Length = 1387 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 agggccgcctccgccgcctcc 28 ||||||||||||||||||||| Sbjct: 301 agggccgcctccgccgcctcc 281
>ref|NM_197834.1| Oryza sativa (japonica cultivar-group) putative nuclear protein (OSJNBa0095C07.4), mRNA Length = 790 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 110 gcagcgccgccaccgccttct 90
>ref|XM_463081.1| Oryza sativa (japonica cultivar-group), mRNA Length = 186 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 37 gcagcgccgccaccgccttct 17
>ref|NM_001040324.1| Danio rerio zgc:136790 (zgc:136790), mRNA Length = 2269 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gatggggatgataagaaggag 142 ||||||||||||||||||||| Sbjct: 1337 gatggggatgataagaaggag 1357
>gb|BC053331.1| Mus musculus crumbs homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5369475), partial cds Length = 4562 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 1612 gaagcctgaactttttgaagg 1632
>ref|XM_801308.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053511839.40) partial mRNA Length = 2592 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 ggatggggatgataagaaggaggag 145 |||||| |||||||||||||||||| Sbjct: 1488 ggatggtgatgataagaaggaggag 1512
>gb|BC026695.1| Mus musculus pellino 1, mRNA (cDNA clone IMAGE:3994888) Length = 1229 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 5 gcgccgccgccgccttctccagcgc 29
>ref|XM_811296.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053511843.70) partial mRNA Length = 2763 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 ggatggggatgataagaaggaggag 145 |||||| |||||||||||||||||| Sbjct: 1275 ggatggtgatgataagaaggaggag 1299
>emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in linkage group 23, complete sequence Length = 184711 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 aagaaggaggagaaggtggac 154 ||||||||||||||||||||| Sbjct: 73733 aagaaggaggagaaggtggac 73753
>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 78142 gcagcgccgccaccgccttct 78122
>ref|XM_950357.1| Theileria annulata strain Ankara hypothetical protein (TA18120) partial mRNA Length = 7218 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gtttgattttacaaagatgtt 264 ||||||||||||||||||||| Sbjct: 987 gtttgattttacaaagatgtt 1007
>gb|AF492496.1| Mus musculus crumbs-like protein 2 (Crb1) mRNA, complete cds Length = 6166 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 3210 gaagcctgaactttttgaagg 3230
>gb|BC115269.1| Danio rerio cDNA clone MGC:136790 IMAGE:7053369, complete cds Length = 2269 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gatggggatgataagaaggag 142 ||||||||||||||||||||| Sbjct: 1337 gatggggatgataagaaggag 1357
>emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chromosome 11 Contains an H+ transporting, mitochondria ATP synthase F0 complex subunit g (Atp5l) pseudogene, the Peli1 gene for pellino 1, a novel pseudogene, a ribosomal protein large P0 (Rplp0) pseudogene, the Vps54 gene for vacuolar protein sorting 54 (yeast), a acyl-Coenzyme A dehydrogenase family (Acad) pseudogene and two CpG islands, complete sequence Length = 206768 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 4745 gcgccgccgccgccttctccagcgc 4769
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 121165 gcagcgccgccaccgccttct 121145
>dbj|AK152997.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830109E24 product:pellino 1, full insert sequence Length = 2560 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 42 gcgccgccgccgccttctccagcgc 66
>dbj|AK152900.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089L10 product:pellino 1, full insert sequence Length = 2594 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 42 gcgccgccgccgccttctccagcgc 66
>gb|AF406641.1|AF406641 Mus musculus crumbs-like protein 1 precursor (Crb1) mRNA, complete cds Length = 4578 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 3334 gaagcctgaactttttgaagg 3354
>dbj|AK151660.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032N07 product:pellino 1, full insert sequence Length = 2689 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 42 gcgccgccgccgccttctccagcgc 66
>dbj|AK153372.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830150E02 product:pellino 1, full insert sequence Length = 2299 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 42 gcgccgccgccgccttctccagcgc 66
>dbj|AK164413.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230013N05 product:crumbs homolog 1 (Drosophila), full insert sequence Length = 3232 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 333 gaagcctgaactttttgaagg 353
>dbj|AK167525.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018J10 product:pellino 1, full insert sequence Length = 2572 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 42 gcgccgccgccgccttctccagcgc 66
>gb|BC031378.1| Mus musculus crumbs homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5358269), partial cds Length = 3368 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 429 gaagcctgaactttttgaagg 449
>dbj|AK045673.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230220E21 product:pellino 1, full insert sequence Length = 2584 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 42 gcgccgccgccgccttctccagcgc 66
>dbj|AK020915.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930031K15 product:pellino 1, full insert sequence Length = 1108 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 75 gcgccgccgccgccttctccagcgc 99
>gb|AC091421.1|AC091421 Mus musculus chromosome 11 clone MGS1-124L2, complete sequence Length = 84497 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 gcgccgccaccgccttctccagcgc 59 |||||||| |||||||||||||||| Sbjct: 61619 gcgccgccgccgccttctccagcgc 61595
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 22116221 gcagcgccgccaccgccttct 22116201
>dbj|AK070664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056O15, full insert sequence Length = 1844 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 117 gcagcgccgccaccgccttct 97
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 cgcagcgccgccaccgccttctcca 55 ||||||||| ||||||||||||||| Sbjct: 2722075 cgcagcgcctccaccgccttctcca 2722099
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttct 52 ||||||||||||||||||||| Sbjct: 22128284 gcagcgccgccaccgccttct 22128264
>emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on chromosome X, complete sequence Length = 118199 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 tccttatgggctccctggaag 314 ||||||||||||||||||||| Sbjct: 26081 tccttatgggctccctggaag 26061
>ref|NM_133239.1| Mus musculus crumbs homolog 1 (Drosophila) (Crb1), mRNA Length = 4578 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 gaagcctgaactttttgaagg 237 ||||||||||||||||||||| Sbjct: 3334 gaagcctgaactttttgaagg 3354
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete sequence Length = 204206 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 tcatgtctttgaagcctgaactttt 231 ||||||||| ||||||||||||||| Sbjct: 27564 tcatgtcttggaagcctgaactttt 27588
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 2755291 ggccgcctccgccgcctccg 2755310
>ref|XM_483847.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2786 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cgcctccgccgcctccgacg 32 |||||||||||||||||||| Sbjct: 1031 cgcctccgccgcctccgacg 1012
>ref|XM_480259.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1965 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccgacgc 33 |||||||||||||||| ||||||| Sbjct: 840 ggccgcctccgccgccgccgacgc 863
>ref|XM_519410.1| PREDICTED: Pan troglodytes similar to transcriptional intermediary factor 1 alpha isoform b; tripartite motif protein 24 (LOC463762), mRNA Length = 3051 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 33 cgccgccaccgccttctcca 14
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 cgcagcgccgccaccgccttctcc 54 ||||||||||||| |||||||||| Sbjct: 2269984 cgcagcgccgccagcgccttctcc 2270007
>ref|NM_003852.3| Homo sapiens tripartite motif-containing 24 (TRIM24), transcript variant 2, mRNA Length = 3905 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 248 cgccgccaccgccttctcca 229
>ref|NM_015905.2| Homo sapiens tripartite motif-containing 24 (TRIM24), transcript variant 1, mRNA Length = 4007 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 248 cgccgccaccgccttctcca 229
>ref|NM_190065.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1530 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gatgataagaaggaggagaaggtg 151 |||||||||||| ||||||||||| Sbjct: 439 gatgataagaagaaggagaaggtg 462
>gb|AC169698.1| Rhesus Macaque BAC CH250-254N3 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 179377 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 atcggaaggttgatgactga 420 |||||||||||||||||||| Sbjct: 58759 atcggaaggttgatgactga 58740
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 2756151 ggccgcctccgccgcctccg 2756170
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gggctcgccggcatcctccc 111 |||||||||||||||||||| Sbjct: 2545650 gggctcgccggcatcctccc 2545669
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gagggccgcctccgccgcct 26 |||||||||||||||||||| Sbjct: 261717 gagggccgcctccgccgcct 261698
>gb|AC129205.3| Mus musculus BAC clone RP24-235I5 from chromosome 19, complete sequence Length = 165024 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 agtcagctgatgttataaaa 343 |||||||||||||||||||| Sbjct: 90177 agtcagctgatgttataaaa 90158
>ref|XM_454492.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E12067g predicted mRNA Length = 1650 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 atgataagaaggaggagaag 148 |||||||||||||||||||| Sbjct: 1 atgataagaaggaggagaag 20
>gb|AC125055.3| Mus musculus BAC clone RP23-397L11 from chromosome 7, complete sequence Length = 209066 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 ctaccgagcacagtttcaaa 566 |||||||||||||||||||| Sbjct: 120399 ctaccgagcacagtttcaaa 120418
>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence Length = 150128 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagaaggaggagaaggtgga 153 |||||||||||||||||||| Sbjct: 19089 aagaaggaggagaaggtgga 19108
>gb|AC126928.3| Mus musculus BAC clone RP24-337I23 from chromosome 9, complete sequence Length = 187235 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aagaaggaggagaaggtgga 153 |||||||||||||||||||| Sbjct: 45893 aagaaggaggagaaggtgga 45874
>gb|AC005536.2| Homo sapiens BAC clone GS1-115E6 from 7, complete sequence Length = 165527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagaaggaggagaaggtgga 153 |||||||||||||||||||| Sbjct: 49664 aagaaggaggagaaggtgga 49683
>gb|AY325903.1| Homo sapiens calcipressin 1 large isoform (DSCR1) mRNA, complete cds Length = 2492 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 183 ggccgcctccgccgcctccg 164
>gb|AC025593.6| Homo sapiens chromosome 7 clone RP11-18L16, complete sequence Length = 184453 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 16411 cgccgccaccgccttctcca 16430
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 atgataagaaggaggagaag 148 |||||||||||||||||||| Sbjct: 1066129 atgataagaaggaggagaag 1066148
>emb|AL954693.5| Zebrafish DNA sequence from clone BUSM1-146N9 in linkage group 14 Contains part of a novel gene similar to human GCN1 (general control of amino-acid synthesis 1-like 1 (yeast)), part of anovel gene similar to human RAB35 (member of RAS oncogene family) and four CpG islands, complete sequence Length = 107343 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 gcagcgccgccaccgccttctcca 55 |||||||||||||||||| ||||| Sbjct: 104701 gcagcgccgccaccgcctgctcca 104724
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 209685 ggccgcctccgccgcctccg 209704
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 115454 ggccgcctccgccgcctccg 115473
>gb|BC028689.2| Homo sapiens tripartite motif-containing 24, transcript variant 1, mRNA (cDNA clone MGC:26421 IMAGE:4827559), complete cds Length = 3909 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 146 cgccgccaccgccttctcca 127
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cagcgccgccaccgccttct 52 |||||||||||||||||||| Sbjct: 942683 cagcgccgccaccgccttct 942664
>dbj|AK092184.1| Homo sapiens cDNA FLJ34865 fis, clone NT2NE2014104, highly similar to DOWN SYNDROME CRITICAL REGION PROTEIN 1 Length = 2407 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 112 ggccgcctccgccgcctccg 93
>dbj|AK075306.1| Homo sapiens cDNA FLJ90825 fis, clone Y79AA1001523, highly similar to Homo sapiens transcriptional intermediary factor 1 alpha mRNA Length = 3997 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 248 cgccgccaccgccttctcca 229
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gccaccgccttctccagcgc 59 |||||||||||||||||||| Sbjct: 991592 gccaccgccttctccagcgc 991573
>dbj|AK156441.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830021P09 product:unclassifiable, full insert sequence Length = 1548 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 agtcagctgatgttataaaa 343 |||||||||||||||||||| Sbjct: 393 agtcagctgatgttataaaa 374
>ref|XM_691197.1| PREDICTED: Danio rerio similar to GCN1 general control of amino-acid synthesis 1-like 1 (LOC567890), mRNA Length = 4914 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 gcagcgccgccaccgccttctcca 55 |||||||||||||||||| ||||| Sbjct: 757 gcagcgccgccaccgcctgctcca 734
>gb|AC025280.5| Homo sapiens chromosome 16 clone RP11-254F19, complete sequence Length = 174714 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gtttgaggtttgattttacaaaga 260 |||||||||||| ||||||||||| Sbjct: 73824 gtttgaggtttggttttacaaaga 73847
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cgcctccgccgcctccgacg 32 |||||||||||||||||||| Sbjct: 28373649 cgcctccgccgcctccgacg 28373668 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ggccgcctccgccgcctccgacgc 33 |||||||||||||||| ||||||| Sbjct: 3935902 ggccgcctccgccgccgccgacgc 3935879
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 8500944 ggccgcctccgccgcctccg 8500963
>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence Length = 180623 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gtttgaggtttgattttacaaaga 260 |||||||||||| ||||||||||| Sbjct: 165537 gtttgaggtttggttttacaaaga 165560
>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete sequence Length = 189362 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 tgaagcctgaactttttgaaggtt 239 |||||||| ||||||||||||||| Sbjct: 87640 tgaagcctaaactttttgaaggtt 87617
>dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 26/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 24691 ggccgcctccgccgcctccg 24710
>gb|AC008265.15|AC008265 Homo sapiens chromosome 7 clone RP11-256C24, complete sequence Length = 170537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 50581 cgccgccaccgccttctcca 50562
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gatgataagaaggaggagaaggtg 151 |||||||||||| ||||||||||| Sbjct: 3767 gatgataagaagaaggagaaggtg 3744
>ref|NM_004414.5| Homo sapiens Down syndrome critical region gene 1 (DSCR1), transcript variant 1, mRNA Length = 2457 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 132 ggccgcctccgccgcctccg 113
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 33412 ggccgcctccgccgcctccg 33431
>gb|AY890510.1| Synthetic construct Homo sapiens clone FLH141746.01X transcriptional intermediary factor 1 (TIF1) mRNA, complete cds Length = 3153 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 33 cgccgccaccgccttctcca 14
>dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, map 22, complete sequences Length = 155412 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 72665 ggccgcctccgccgcctccg 72684
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cgcctccgccgcctccgacg 32 |||||||||||||||||||| Sbjct: 102455 cgcctccgccgcctccgacg 102474
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ggccgcctccgccgcctccgacgc 33 |||||||||||||||| ||||||| Sbjct: 23199 ggccgcctccgccgccgccgacgc 23176
>dbj|AK119354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-F10, full insert sequence Length = 2786 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cgcctccgccgcctccgacg 32 |||||||||||||||||||| Sbjct: 1031 cgcctccgccgcctccgacg 1012
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 132537 ggccgcctccgccgcctccg 132556
>dbj|AK111027.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H05, full insert sequence Length = 668 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gatgataagaaggaggagaaggtg 151 |||||||||||| ||||||||||| Sbjct: 504 gatgataagaagaaggagaaggtg 527
>gb|AC003681.1|AC003681 Human PAC clone RP3-394A18 from 22q12.1-qter, complete sequence Length = 88528 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 caactttgactacaagggcacaga 546 |||||| ||||||||||||||||| Sbjct: 39400 caacttggactacaagggcacaga 39377
>dbj|AK107422.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-F08, full insert sequence Length = 1552 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagaaggaggagaaggtgga 153 |||||||||||||||||||| Sbjct: 256 aagaaggaggagaaggtgga 275
>dbj|AK107072.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E12, full insert sequence Length = 1804 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 gatgataagaaggaggagaaggtg 151 |||||||||||| ||||||||||| Sbjct: 506 gatgataagaagaaggagaaggtg 529
>dbj|AK066280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066D13, full insert sequence Length = 4143 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 678 ggccgcctccgccgcctccg 697
>gb|AF155932.1| Avena sativa 1,3-beta glucanase (Oglc13) mRNA, partial cds Length = 1045 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctccagcgc 59 ||||||| |||||||||||||||| Sbjct: 666 cgccgcccccgccttctccagcgc 643
>gb|AF119042.1|AF119042 Homo sapiens transcriptional intermediary factor 1 alpha mRNA, complete cds Length = 3807 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 149 cgccgccaccgccttctcca 130
>dbj|AP000870.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H10, complete sequence Length = 179339 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gatggggatgataagaagga 141 |||||||||||||||||||| Sbjct: 134875 gatggggatgataagaagga 134894
>dbj|AP000327.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-31L12, complete sequence Length = 35714 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 23870 ggccgcctccgccgcctccg 23889
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 206900 ggccgcctccgccgcctccg 206919
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 gcgccgccaccgccttctccagcg 58 |||||||||||||||| ||||||| Sbjct: 5285854 gcgccgccaccgccttgtccagcg 5285877
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 1574690 ggccgcctccgccgcctccg 1574671
>gb|U15959.1|ADU15959 Acheta domesticus diuretic hormone receptor mRNA, complete cds Length = 1326 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 gccgcctccgccgcctccgacgca 34 |||||||||||||||||| ||||| Sbjct: 47 gccgcctccgccgcctccaacgca 24
>gb|AC005187.1|AC005187 Homo sapiens chromosome 4 clone B153K6 map 4q25, complete sequence Length = 114621 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aagaaggaggagaaggtgga 153 |||||||||||||||||||| Sbjct: 13086 aagaaggaggagaaggtgga 13105
>gb|AF009353.1|AF009353 Homo sapiens transcription intermediary factor 1 (TIF1) mRNA, complete cds Length = 3039 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccaccgccttctcca 55 |||||||||||||||||||| Sbjct: 33 cgccgccaccgccttctcca 14
>emb|Z81029.1|CEC01A2 Caenorhabditis elegans Cosmid C01A2, complete sequence Length = 40202 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 tttgaagcctgaactttttgaagg 237 |||||||| ||||||||||||||| Sbjct: 7029 tttgaagcatgaactttttgaagg 7006
>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence Length = 190996 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 acagtttcaaattggaaata 575 |||||||||||||||||||| Sbjct: 121831 acagtttcaaattggaaata 121812
>gb|AY048670.1| Streptomyces globisporus enediyne antitumor antibiotic C-1027 biosynthetic gene cluster, complete sequence Length = 85163 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agggccgcctccgccgcctc 27 |||||||||||||||||||| Sbjct: 55034 agggccgcctccgccgcctc 55015
>gb|L14526.1|TALRR58SH Talaromyces mimosinus (FRR 1875) 5.8S rRNA and internal transcribed spacers 1 and 2 Length = 624 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 ccgacgcagcgccgccaccgcctt 50 |||||||||||||||||| ||||| Sbjct: 470 ccgacgcagcgccgccactgcctt 447
>dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 6/9, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggccgcctccgccgcctccg 29 |||||||||||||||||||| Sbjct: 16659 ggccgcctccgccgcctccg 16678
>emb|AL627078.10| Mouse DNA sequence from clone RP23-138K13 on chromosome 4, complete sequence Length = 90129 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 gatggggatgataagaaggaggagaagg 149 ||||||||||||| |||||| ||||||| Sbjct: 59573 gatggggatgatacgaaggatgagaagg 59600 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,350,857 Number of Sequences: 3902068 Number of extensions: 5350857 Number of successful extensions: 135201 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133511 Number of HSP's gapped (non-prelim): 1687 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
