ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TENS1_HUMAN (Q9HBL0) Tensin-1 36 0.066
2TENS1_BOVIN (Q9GLM4) Tensin-1 36 0.066
3TENS_CHICK (Q04205) Tensin 34 0.25
4TORA_VIBPA (Q87QI7) Trimethylamine-N-oxide reductase precursor (... 30 6.1
5GAK_HUMAN (O14976) Cyclin G-associated kinase (EC 2.7.11.1) 30 6.1
6GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7) 30 6.1
7YKY5_CAEEL (P49958) Hypothetical protein C14B1.5 29 8.0
8YL177_MIMIV (Q5UPN8) Hypothetical protein L177 29 8.0

>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = +2

Query: 146 VQGDVVLECVHLDLDPEKEVMMFRIMFNTAFIRSNVLMLNSDDVDILWGSKDRYPRNFRA 325
           ++GD++L+C H         ++FR+ F+T  I    ++   +D+D  +   DR+P   + 
Sbjct: 242 LKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAF-KDDRFPEYGKV 300

Query: 326 EVLF 337
           E +F
Sbjct: 301 EFVF 304



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>TENS1_BOVIN (Q9GLM4) Tensin-1|
          Length = 1715

 Score = 36.2 bits (82), Expect = 0.066
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = +2

Query: 146 VQGDVVLECVHLDLDPEKEVMMFRIMFNTAFIRSNVLMLNSDDVDILWGSKDRYPRNFRA 325
           ++GD++L+C H         ++FR+ F+T  I    ++   +D+D  +   DR+P   + 
Sbjct: 242 LKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAF-KDDRFPEYGKV 300

Query: 326 EVLF 337
           E +F
Sbjct: 301 EFVF 304



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>TENS_CHICK (Q04205) Tensin|
          Length = 1744

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 15/64 (23%), Positives = 34/64 (53%)
 Frame = +2

Query: 146 VQGDVVLECVHLDLDPEKEVMMFRIMFNTAFIRSNVLMLNSDDVDILWGSKDRYPRNFRA 325
           ++GD++L+C H         ++FR+ F+T  +    ++   +D+D  +   +R+P   + 
Sbjct: 296 LKGDILLKCYHKKFRSPTRDVIFRVQFHTCAVHDLDIVFGKEDLDEAF-RDERFPEYGKV 354

Query: 326 EVLF 337
           E +F
Sbjct: 355 EFVF 358



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>TORA_VIBPA (Q87QI7) Trimethylamine-N-oxide reductase precursor (EC 1.7.2.3)|
           (TMAO reductase) (Trimethylamine oxidase)
          Length = 820

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 405 VYQLKPFQLFKNSSMMLNGWKAVIMLP 485
           V ++KP +L KN + MLNG K +I  P
Sbjct: 59  VQEIKPLELDKNPTEMLNGIKGIIYSP 85



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>GAK_HUMAN (O14976) Cyclin G-associated kinase (EC 2.7.11.1)|
          Length = 1311

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
 Frame = +2

Query: 89  LRHYRQEDCDVIKIDIQCPVQGDVVLECVHLD------LDPEKEVM-MFRIMFNTAFIRS 247
           +R ++ ED   + I +   VQGDV++   H        L  +   M MF+I F+T F+  
Sbjct: 618 MRDFKIEDGKAV-IPLGVTVQGDVLIVIYHARSTLGGRLQAKMASMKMFQIQFHTGFVPR 676

Query: 248 NVLMLNSDDVDI-LWGSKDRYPRNFRAEVLFCEIGGISPPRAPTATLNGDMKGGLPIEAF 424
           N   +     D+     +++YP  F+  +         P R      N  M+G  P   F
Sbjct: 677 NATTVKFAKYDLDACDIQEKYPDLFQVNLEVEVEPRDRPSREAPPWENSSMRGLNPKILF 736

Query: 425 SAVQE 439
           S+ +E
Sbjct: 737 SSREE 741



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>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 730

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 347 GGISPPRAPTATLNGDMKGGLPIEAFSAVQELFNDVEW 460
           GG   P    A + G   GG P++  + VQ+ F+D+ W
Sbjct: 222 GGSEEPSQLVAGIPGRGAGGDPVDRGAQVQKAFSDIRW 259



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>YKY5_CAEEL (P49958) Hypothetical protein C14B1.5|
          Length = 396

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +2

Query: 5   LIRIFGRNLLGKNASMTDMIFSMPKKKTLRHYRQEDCDVIKIDI-QC-PVQGDVVLECVH 178
           LI     N  GK   +   +  +P  +TLR    +D   I+IDI QC P+    VL C  
Sbjct: 137 LIDCVKENFQGKRLVVVSTVQFIPSLQTLRTTFNKDDSSIRIDIPQCKPLSPGEVLGCTS 196

Query: 179 LDLDPEK 199
             LD  K
Sbjct: 197 PRLDASK 203



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>YL177_MIMIV (Q5UPN8) Hypothetical protein L177|
          Length = 379

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 256 QYI*TNKSSIKHYPEHHNFLFWIKIKMHTLQNNISLDWTLDINFYHITV 110
           +YI   K+S K Y   +N++++ KIK    Q  I +D+     F    V
Sbjct: 18  KYIKQTKNSYKLYLSDNNYIYFDKIKTQDCQKYIEVDFNNSFEFLKFIV 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,213,135
Number of Sequences: 219361
Number of extensions: 1623250
Number of successful extensions: 3874
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3873
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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