| Clone Name | bags33o09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E17, full insert sequence Length = 1827 Score = 557 bits (281), Expect = e-155 Identities = 485/553 (87%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| || Sbjct: 609 tattactcttatgtccacgaactcaccagcagccttgctgaaattcgtggaactcttctg 668 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | |||||||| ||||||||||| || | |||||||||||| ||||||||||| || ||| Sbjct: 669 gcattgcacagaatggcaactttacatcgtgatgagcttggtcaggaaactctactcaac 728 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 |||||||||||||| ||||||||||||||| | |||||||| |||||||| |||||||| Sbjct: 729 ctgcttcttcgcaactacctgcactacaacttgtatgaccaagcagaaaagcttaggtcc 788 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 789 aaggcaccgcgttttgaagcacattctaatcagcagttctgcaggtatctgttctacttg 848 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 ||||||||||| ||||||||| | || ||||||||||| || || ||||| |||||||| Sbjct: 849 ggaaaaattaggacaattcagttggagtacactgatgcaaaggaaagcctactgcaagct 908 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || || || ||||||||| |||||||||| ||||| | ||||||||||| |||||||| Sbjct: 909 gctcgaaaggcacccactacagctcgtgggttccgagttcagtgcaacaagtgggctatc 968 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| || |||||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 969 atagtgagattacttttaggagaaataccagagagaactgtttttatgcagaaaggaatg 1028 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1029 aaggctgctttggcaccatattttgagcttacaaatgctgttcgagttggggaccttgaa 1088 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggacatccaat 560 ||||||||| || ||||| ||||||| |||||||| || || || ||||| |||| Sbjct: 1089 ttgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaat 1148 Query: 561 ttgatcgtgaggc 573 ||||| ||||||| Sbjct: 1149 ttgatagtgaggc 1161
>dbj|AK100985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D07, full insert sequence Length = 1824 Score = 557 bits (281), Expect = e-155 Identities = 485/553 (87%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| || Sbjct: 571 tattactcttatgtccacgaactcaccagcagccttgctgaaattcgtggaactcttctg 630 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | |||||||| ||||||||||| || | |||||||||||| ||||||||||| || ||| Sbjct: 631 gcattgcacagaatggcaactttacatcgtgatgagcttggtcaggaaactctactcaac 690 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 |||||||||||||| ||||||||||||||| | |||||||| |||||||| |||||||| Sbjct: 691 ctgcttcttcgcaactacctgcactacaacttgtatgaccaagcagaaaagcttaggtcc 750 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 751 aaggcaccgcgttttgaagcacattctaatcagcagttctgcaggtatctgttctacttg 810 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 ||||||||||| ||||||||| | || ||||||||||| || || ||||| |||||||| Sbjct: 811 ggaaaaattaggacaattcagttggagtacactgatgcaaaggaaagcctactgcaagct 870 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || || || ||||||||| |||||||||| ||||| | ||||||||||| |||||||| Sbjct: 871 gctcgaaaggcacccactacagctcgtgggttccgagttcagtgcaacaagtgggctatc 930 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| || |||||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 931 atagtgagattacttttaggagaaataccagagagaactgtttttatgcagaaaggaatg 990 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 991 aaggctgctttggcaccatattttgagcttacaaatgctgttcgagttggggaccttgaa 1050 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggacatccaat 560 ||||||||| || ||||| ||||||| |||||||| || || || ||||| |||| Sbjct: 1051 ttgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaat 1110 Query: 561 ttgatcgtgaggc 573 ||||| ||||||| Sbjct: 1111 ttgatagtgaggc 1123
>dbj|AB031299.1| Oryza sativa (japonica cultivar-group) Os21D7 mRNA, complete cds Length = 1776 Score = 557 bits (281), Expect = e-155 Identities = 485/553 (87%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| || Sbjct: 544 tattactcttatgtccacgaactcaccagcagccttgctgaaattcgtggaactcttctg 603 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | |||||||| ||||||||||| || | |||||||||||| ||||||||||| || ||| Sbjct: 604 gcattgcacagaatggcaactttacatcgtgatgagcttggtcaggaaactctactcaac 663 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 |||||||||||||| ||||||||||||||| | |||||||| |||||||| |||||||| Sbjct: 664 ctgcttcttcgcaactacctgcactacaacttgtatgaccaagcagaaaagcttaggtcc 723 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct: 724 aaggcaccgcgttttgaagcacattctaatcagcagttctgcaggtatctgttctacttg 783 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 ||||||||||| ||||||||| | || ||||||||||| || || ||||| |||||||| Sbjct: 784 ggaaaaattaggacaattcagttggagtacactgatgcaaaggaaagcctactgcaagct 843 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || || || ||||||||| |||||||||| ||||| | ||||||||||| |||||||| Sbjct: 844 gctcgaaaggcacccactacagctcgtgggttccgagttcagtgcaacaagtgggctatc 903 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| || |||||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 904 atagtgagattacttttaggagaaataccagagagaactgtttttatgcagaaaggaatg 963 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 964 aaggctgctttggcaccatattttgagcttacaaatgctgttcgagttggggaccttgaa 1023 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggacatccaat 560 ||||||||| || ||||| ||||||| |||||||| || || || ||||| |||| Sbjct: 1024 ttgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaat 1083 Query: 561 ttgatcgtgaggc 573 ||||| ||||||| Sbjct: 1084 ttgatagtgaggc 1096
>dbj|AK059017.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A11, full insert sequence Length = 1019 Score = 454 bits (229), Expect = e-124 Identities = 397/453 (87%) Strand = Plus / Plus Query: 121 ggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacc 180 ||||||||||||| || ||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 3 ggcaggaaactctactcaacctgcttcttcgcaactacctgcactacaacttgtatgacc 62 Query: 181 aggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcagcagttct 240 | |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 63 aagcagaaaagcttaggtccaaggcaccgcgttttgaagcacattctaatcagcagttct 122 Query: 241 gccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacactgatgcta 300 || | |||||||||||||||||||||||||| ||||||||| | || ||||||||||| | Sbjct: 123 gcaggtatctgttctacttgggaaaaattaggacaattcagttggagtacactgatgcaa 182 Query: 301 aagagagcctcttgcaagctgcacggaaagcacccactgcagctcgtggattccgcatcc 360 | || ||||| |||||||||| || || ||||||||| |||||||||| ||||| | | Sbjct: 183 aggaaagcctactgcaagctgctcgaaaggcacccactacagctcgtgggttccgagttc 242 Query: 361 agtgcaacaaatgggctatactagtaaggctacttttaggggagataccagagagaactg 420 |||||||||| |||||||| |||| || |||||||||| || |||||||||||||||| Sbjct: 243 agtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaactg 302 Query: 421 ttttcatgcagaaaggaatgaaggcggctttgacaccatattttgagcttacaaatgctg 480 |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 303 tttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatgctg 362 Query: 481 ttcgcgttggggacctagaagtgttcagagttgttgcagataaatttgggagcactttta 540 |||| ||||||||||| ||| ||||||||| || ||||| ||||||| |||||||| | Sbjct: 363 ttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactttca 422 Query: 541 gtgctgacaggacatccaatttgatcgtgaggc 573 | || || ||||| ||||||||| ||||||| Sbjct: 423 gcgcggataggacgcgcaatttgatagtgaggc 455
>gb|BT016664.1| Zea mays clone Contig497 mRNA sequence Length = 1385 Score = 341 bits (172), Expect = 2e-90 Identities = 409/488 (83%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| ||||| |||| || |||||||||||||||||||| || || | ||| ||| Sbjct: 249 tattactcttatgtgtatgagcttaccaacagccttgctgaaatccgcgggaatctgctt 308 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | | ||||| |||||||||||||| | ||| ||||| || ||||||||||| || || Sbjct: 309 gctctacacagaatggcaactttgcatcgtgacgagctcggccaggaaactctgctgaat 368 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 || || || ||||||||||| ||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 369 cttctcctccgcaattacctccactacaacttgtatgatcaggcagaaaagcttagatca 428 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 |||| ||| |||||||||||||||||||| || || |||||||| || ||||||||||| Sbjct: 429 aaggtacctcgttttgaagcacattccaaccaacaattctgccgatacttgttctacttg 488 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 || |||||||| ||||||||| | || ||||||||||||||||| |||||| |||||||| Sbjct: 489 ggcaaaattaggacaattcagttggagtacactgatgctaaagaaagcctcctgcaagct 548 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || || || ||||| || | || ||||| || || ||||||||||||||||||||||| Sbjct: 549 gctcgtaaggcaccaacaactgcccgtggttttcggatccagtgcaacaaatgggctatc 608 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| ||||| || | || ||||| |||||||| |||||||||||||||||||||||| Sbjct: 609 atagtgaggctgctgcttggtgagattccagagaggactgttttcatgcagaaaggaatg 668 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 ||| ||| ||||||| ||||||||||| ||||||||||| | ||||||||||| ||| Sbjct: 669 aagaaagctctgacaccttattttgagctcacaaatgctgtcagggttggggaccttgaa 728 Query: 501 gtgttcag 508 ||||||| Sbjct: 729 ctgttcag 736
>ref|XM_483674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 339 bits (171), Expect = 6e-90 Identities = 456/551 (82%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 554 tattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgggaatctgcta 613 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | || ||||| ||||||||| | |||| ||||| ||||| ||||||||| | || ||| Sbjct: 614 gccttacacagaatggcaactcttcaccgcgatgaacttggccaggaaactttgctcaac 673 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 |||||||||||||||||||| || || || | ||||| || ||||| |||||||||||| Sbjct: 674 ctgcttcttcgcaattacctccattataatttgtatgatcaagcagagaaacttaggtca 733 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 || || || ||||||||||| || |||||||| || ||||| || || |||||||||||| Sbjct: 734 aaagctcctcgttttgaagcccactccaatcaacaattctgtcgatacctgttctacttg 793 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 || ||||| || ||||||||| | || |||||||||||||| || ||||| |||||||| Sbjct: 794 ggtaaaatcaggacaattcagttggagtacactgatgctaaggaaagccttctgcaagct 853 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || ||||| ||||||| | |||||||||| || || || |||||||||||||||||||| Sbjct: 854 gctcggaaggcacccattacagctcgtggctttcgtattcagtgcaacaaatgggctatt 913 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| || |||||| | || ||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 914 atagtgagactacttctcggagagattccagagaggactgtgttcatgcagaagggaatg 973 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 |||| || ||||||| || || ||||||||||||||||| | | || || || ||| Sbjct: 974 aaggaagcactgacaccctacttcgagcttacaaatgctgtcaggatcggtgatcttgaa 1033 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggacatccaat 560 |||| || | ||| || || ||||||| |||||||||||||||||||||||| |||| Sbjct: 1034 ttgtttagggctgtcgccgacaaatttgtgagcacttttagtgctgacaggactcgcaat 1093 Query: 561 ttgatcgtgag 571 ||||| ||||| Sbjct: 1094 ttgattgtgag 1104
>dbj|AK061287.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H08, full insert sequence Length = 1694 Score = 339 bits (171), Expect = 6e-90 Identities = 456/551 (82%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 554 tattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgggaatctgcta 613 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | || ||||| ||||||||| | |||| ||||| ||||| ||||||||| | || ||| Sbjct: 614 gccttacacagaatggcaactcttcaccgcgatgaacttggccaggaaactttgctcaac 673 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 |||||||||||||||||||| || || || | ||||| || ||||| |||||||||||| Sbjct: 674 ctgcttcttcgcaattacctccattataatttgtatgatcaagcagagaaacttaggtca 733 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 || || || ||||||||||| || |||||||| || ||||| || || |||||||||||| Sbjct: 734 aaagctcctcgttttgaagcccactccaatcaacaattctgtcgatacctgttctacttg 793 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 || ||||| || ||||||||| | || |||||||||||||| || ||||| |||||||| Sbjct: 794 ggtaaaatcaggacaattcagttggagtacactgatgctaaggaaagccttctgcaagct 853 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || ||||| ||||||| | |||||||||| || || || |||||||||||||||||||| Sbjct: 854 gctcggaaggcacccattacagctcgtggctttcgtattcagtgcaacaaatgggctatt 913 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| || |||||| | || ||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 914 atagtgagactacttctcggagagattccagagaggactgtgttcatgcagaagggaatg 973 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 |||| || ||||||| || || ||||||||||||||||| | | || || || ||| Sbjct: 974 aaggaagcactgacaccctacttcgagcttacaaatgctgtcaggatcggtgatcttgaa 1033 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggacatccaat 560 |||| || | ||| || || ||||||| |||||||||||||||||||||||| |||| Sbjct: 1034 ttgtttagggctgtcgccgacaaatttgtgagcacttttagtgctgacaggactcgcaat 1093 Query: 561 ttgatcgtgag 571 ||||| ||||| Sbjct: 1094 ttgattgtgag 1104
>dbj|AB070258.1| Oryza sativa (japonica cultivar-group) OsRPN3 mRNA for 26S proteasome regulatory particle non-ATPase subunit3, partial cds Length = 1458 Score = 339 bits (171), Expect = 6e-90 Identities = 456/551 (82%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct: 292 tattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgggaatctgcta 351 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | || ||||| ||||||||| | |||| ||||| ||||| ||||||||| | || ||| Sbjct: 352 gccttacacagaatggcaactcttcaccgcgatgaacttggccaggaaactttgctcaac 411 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 |||||||||||||||||||| || || || | ||||| || ||||| |||||||||||| Sbjct: 412 ctgcttcttcgcaattacctccattataatttgtatgatcaagcagagaaacttaggtca 471 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 || || || ||||||||||| || |||||||| || ||||| || || |||||||||||| Sbjct: 472 aaagctcctcgttttgaagcccactccaatcaacaattctgtcgatacctgttctacttg 531 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 || ||||| || ||||||||| | || |||||||||||||| || ||||| |||||||| Sbjct: 532 ggtaaaatcaggacaattcagttggagtacactgatgctaaggaaagccttctgcaagct 591 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || ||||| ||||||| | |||||||||| || || || |||||||||||||||||||| Sbjct: 592 gctcggaaggcacccattacagctcgtggctttcgtattcagtgcaacaaatgggctatt 651 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| || |||||| | || ||||| |||||||| ||||| ||||||||||| |||||| Sbjct: 652 atagtgagactacttctcggagagattccagagaggactgtgttcatgcagaagggaatg 711 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 |||| || ||||||| || || ||||||||||||||||| | | || || || ||| Sbjct: 712 aaggaagcactgacaccctacttcgagcttacaaatgctgtcaggatcggtgatcttgaa 771 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggacatccaat 560 |||| || | ||| || || ||||||| |||||||||||||||||||||||| |||| Sbjct: 772 ttgtttagggctgtcgccgacaaatttgtgagcacttttagtgctgacaggactcgcaat 831 Query: 561 ttgatcgtgag 571 ||||| ||||| Sbjct: 832 ttgattgtgag 842
>gb|AY103743.1| Zea mays PCO080586 mRNA sequence Length = 1852 Score = 311 bits (157), Expect = 1e-81 Identities = 439/533 (82%) Strand = Plus / Plus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtggaactctcctt 80 |||||||| ||||| |||| || |||||||||||||||||||| ||||| | | | ||| Sbjct: 635 tattactcttatgtgtatgagcttaccaacagccttgctgaaatccgtgggaatttgctt 694 Query: 81 gggttgcacaggatggcaactttgcaccatgatgagcttgggcaggaaactcttcttaac 140 | | ||||| |||||||||||||| | ||| |||||||| |||||||| || || || Sbjct: 695 gctctacacagaatggcaactttgcatcgtgacgagcttggccaggaaacactgctcaat 754 Query: 141 ctgcttcttcgcaattacctgcactacaacctatatgaccaggcagaaaaacttaggtca 200 || || |||||||||||||| |||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 755 ctcctccttcgcaattacctccactacaatttgtatgatcaggcagaaaagcttagatca 814 Query: 201 aaggcaccgcgttttgaagcacattccaatcagcagttctgccgctatctgttctacttg 260 |||||||| |||||||||||||| |||||||| || |||||||| || ||||||||||| Sbjct: 815 aaggcacctcgttttgaagcacactccaatcaacaattctgccgatacttgttctacttg 874 Query: 261 ggaaaaattagaacaattcagctcgaatacactgatgctaaagagagcctcttgcaagct 320 || ||||| || ||||| ||| | || ||||| ||||||||||| |||||| |||||||| Sbjct: 875 ggtaaaatcaggacaatccagttggagtacaccgatgctaaagaaagcctcctgcaagct 934 Query: 321 gcacggaaagcacccactgcagctcgtggattccgcatccagtgcaacaaatgggctata 380 || || || ||||| | |||| |||| || || || |||||||||||||||||||| Sbjct: 935 gctcgtaaggcaccaataacagcctgtggttttcggattcagtgcaacaaatgggctatc 994 Query: 381 ctagtaaggctacttttaggggagataccagagagaactgttttcatgcagaaaggaatg 440 |||| ||||| || | || ||||| || ||||| |||||||||||||||||||||||| Sbjct: 995 atagtgaggctgctgcttggagagattcctgagaggactgttttcatgcagaaaggaatg 1054 Query: 441 aaggcggctttgacaccatattttgagcttacaaatgctgttcgcgttggggacctagaa 500 ||| ||| ||| ||| ||||||||||| ||||||||||| | ||||||||||| ||| Sbjct: 1055 aagaaagctctgataccttattttgagctcacaaatgctgtcagggttggggaccttgaa 1114 Query: 501 gtgttcagagttgttgcagataaatttgggagcacttttagtgctgacaggac 553 ||||||| | ||||||||| ||||||| ||||| || || || |||||||| Sbjct: 1115 ctgttcagggctgttgcagacaaatttgcaagcacattcagcgcagacaggac 1167
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Minus Query: 233 gcagttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacac 292 |||||||||| | |||||||||||||||||||||||||| ||||||||| | || ||||| Sbjct: 21038536 gcagttctgcaggtatctgttctacttgggaaaaattaggacaattcagttggagtacac 21038477 Query: 293 tgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgtggatt 352 |||||| || || ||||| |||||||||| || || ||||||||| |||||||||| || Sbjct: 21038476 tgatgcaaaggaaagcctactgcaagctgctcgaaaggcacccactacagctcgtgggtt 21038417 Query: 353 ccgcatccagtgcaacaaatgggctatactagtaaggctacttttaggggagataccaga 412 ||| | ||||||||||| |||||||| |||| || |||||||||| || |||||||| Sbjct: 21038416 ccgagttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccaga 21038357 Query: 413 gagaactgttttcatgcagaaaggaatgaaggcggctttgacaccatattttgagcttac 472 |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 21038356 gagaactgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttac 21038297 Query: 473 aaatg 477 ||||| Sbjct: 21038296 aaatg 21038292 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 121 ggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacc 180 ||||||||||||| || ||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 21038794 ggcaggaaactctactcaacctgcttcttcgcaactacctgcactacaacttgtatgacc 21038735 Query: 181 aggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcagcag 236 | |||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 21038734 aagcagaaaagcttaggtccaaggcaccgcgttttgaagcacattctaatcagcag 21038679 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtgg 70 |||||||| |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 21039123 tattactcttatgtccacgaactcaccagcagccttgctgaaattcgtgg 21039074 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 477 gctgttcgcgttggggacctagaagtgttcagagttgttgcagataaatttgggagcact 536 |||||||| ||||||||||| ||| ||||||||| || ||||| ||||||| |||||| Sbjct: 21038210 gctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcact 21038151 Query: 537 tttagtgctgacaggacatccaatttgatcgtgaggc 573 || || || || ||||| ||||||||| ||||||| Sbjct: 21038150 ttcagcgcggataggacgcgcaatttgatagtgaggc 21038114 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 84 ttgcacaggatggcaactttgcaccatgatgagcttgggcagg 126 |||||||| ||||||||||| || | |||||||||||| |||| Sbjct: 21038913 ttgcacagaatggcaactttacatcgtgatgagcttggtcagg 21038871
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Minus Query: 233 gcagttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacac 292 |||||||||| | |||||||||||||||||||||||||| ||||||||| | || ||||| Sbjct: 130625 gcagttctgcaggtatctgttctacttgggaaaaattaggacaattcagttggagtacac 130566 Query: 293 tgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgtggatt 352 |||||| || || ||||| |||||||||| || || ||||||||| |||||||||| || Sbjct: 130565 tgatgcaaaggaaagcctactgcaagctgctcgaaaggcacccactacagctcgtgggtt 130506 Query: 353 ccgcatccagtgcaacaaatgggctatactagtaaggctacttttaggggagataccaga 412 ||| | ||||||||||| |||||||| |||| || |||||||||| || |||||||| Sbjct: 130505 ccgagttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccaga 130446 Query: 413 gagaactgttttcatgcagaaaggaatgaaggcggctttgacaccatattttgagcttac 472 |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 130445 gagaactgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttac 130386 Query: 473 aaatg 477 ||||| Sbjct: 130385 aaatg 130381 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 121 ggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacc 180 ||||||||||||| || ||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 130883 ggcaggaaactctactcaacctgcttcttcgcaactacctgcactacaacttgtatgacc 130824 Query: 181 aggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcagcag 236 | |||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 130823 aagcagaaaagcttaggtccaaggcaccgcgttttgaagcacattctaatcagcag 130768 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtgg 70 |||||||| |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 131212 tattactcttatgtccacgaactcaccagcagccttgctgaaattcgtgg 131163 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 477 gctgttcgcgttggggacctagaagtgttcagagttgttgcagataaatttgggagcact 536 |||||||| ||||||||||| ||| ||||||||| || ||||| ||||||| |||||| Sbjct: 130299 gctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcact 130240 Query: 537 tttagtgctgacaggacatccaatttgatcgtgaggc 573 || || || || ||||| ||||||||| ||||||| Sbjct: 130239 ttcagcgcggataggacgcgcaatttgatagtgaggc 130203 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 84 ttgcacaggatggcaactttgcaccatgatgagcttgggcagg 126 |||||||| ||||||||||| || | |||||||||||| |||| Sbjct: 131002 ttgcacagaatggcaactttacatcgtgatgagcttggtcagg 130960
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Minus Query: 233 gcagttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacac 292 |||||||||| | |||||||||||||||||||||||||| ||||||||| | || ||||| Sbjct: 59836 gcagttctgcaggtatctgttctacttgggaaaaattaggacaattcagttggagtacac 59777 Query: 293 tgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgtggatt 352 |||||| || || ||||| |||||||||| || || ||||||||| |||||||||| || Sbjct: 59776 tgatgcaaaggaaagcctactgcaagctgctcgaaaggcacccactacagctcgtgggtt 59717 Query: 353 ccgcatccagtgcaacaaatgggctatactagtaaggctacttttaggggagataccaga 412 ||| | ||||||||||| |||||||| |||| || |||||||||| || |||||||| Sbjct: 59716 ccgagttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccaga 59657 Query: 413 gagaactgttttcatgcagaaaggaatgaaggcggctttgacaccatattttgagcttac 472 |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 59656 gagaactgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttac 59597 Query: 473 aaatg 477 ||||| Sbjct: 59596 aaatg 59592 Score = 159 bits (80), Expect = 1e-35 Identities = 107/116 (92%) Strand = Plus / Minus Query: 121 ggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacc 180 ||||||||||||| || ||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 60094 ggcaggaaactctactcaacctgcttcttcgcaactacctgcactacaacttgtatgacc 60035 Query: 181 aggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcagcag 236 | |||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 60034 aagcagaaaagcttaggtccaaggcaccgcgttttgaagcacattctaatcagcag 59979 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtgg 70 |||||||| |||||||| |||||||||| ||||||||||||||||||||| Sbjct: 60423 tattactcttatgtccacgaactcaccagcagccttgctgaaattcgtgg 60374 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 477 gctgttcgcgttggggacctagaagtgttcagagttgttgcagataaatttgggagcact 536 |||||||| ||||||||||| ||| ||||||||| || ||||| ||||||| |||||| Sbjct: 59510 gctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcact 59451 Query: 537 tttagtgctgacaggacatccaatttgatcgtgaggc 573 || || || || ||||| ||||||||| ||||||| Sbjct: 59450 ttcagcgcggataggacgcgcaatttgatagtgaggc 59414 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 84 ttgcacaggatggcaactttgcaccatgatgagcttgggcagg 126 |||||||| ||||||||||| || | |||||||||||| |||| Sbjct: 60213 ttgcacagaatggcaactttacatcgtgatgagcttggtcagg 60171
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 176 bits (89), Expect = 5e-41 Identities = 206/245 (84%) Strand = Plus / Minus Query: 233 gcagttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacac 292 ||||||||| || || |||||||||||||| ||||| || ||||||||| | || ||||| Sbjct: 27582297 gcagttctgtcgatacctgttctacttgggtaaaatcaggacaattcagttggagtacac 27582238 Query: 293 tgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgtggatt 352 ||||||||| || ||||| |||||||||| ||||| ||||||| | |||||||||| || Sbjct: 27582237 tgatgctaaggaaagccttctgcaagctgctcggaaggcacccattacagctcgtggctt 27582178 Query: 353 ccgcatccagtgcaacaaatgggctatactagtaaggctacttttaggggagataccaga 412 || || |||||||||||||||||||| |||| || |||||| | || ||||| ||||| Sbjct: 27582177 tcgtattcagtgcaacaaatgggctattatagtgagactacttctcggagagattccaga 27582118 Query: 413 gagaactgttttcatgcagaaaggaatgaaggcggctttgacaccatattttgagcttac 472 ||| ||||| ||||||||||| |||||||||| || ||||||| || || |||||||| Sbjct: 27582117 gaggactgtgttcatgcagaagggaatgaaggaagcactgacaccctacttcgagcttac 27582058 Query: 473 aaatg 477 ||||| Sbjct: 27582057 aaatg 27582053 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 122 gcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacca 181 |||||||||| | || ||||||||||||||||||||||| || || || | ||||| || Sbjct: 27582641 gcaggaaactttgctcaacctgcttcttcgcaattacctccattataatttgtatgatca 27582582 Query: 182 ggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatca 232 ||||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 27582581 agcagagaaacttaggtcaaaagctcctcgttttgaagcccactccaatca 27582531 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtgg 70 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 27582929 tattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgg 27582880 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 522 aaatttgggagcacttttagtgctgacaggacatccaatttgatcgtgag 571 ||||||| |||||||||||||||||||||||| ||||||||| ||||| Sbjct: 27581933 aaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgag 27581884
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 176 bits (89), Expect = 5e-41 Identities = 206/245 (84%) Strand = Plus / Minus Query: 233 gcagttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacac 292 ||||||||| || || |||||||||||||| ||||| || ||||||||| | || ||||| Sbjct: 64587 gcagttctgtcgatacctgttctacttgggtaaaatcaggacaattcagttggagtacac 64528 Query: 293 tgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgtggatt 352 ||||||||| || ||||| |||||||||| ||||| ||||||| | |||||||||| || Sbjct: 64527 tgatgctaaggaaagccttctgcaagctgctcggaaggcacccattacagctcgtggctt 64468 Query: 353 ccgcatccagtgcaacaaatgggctatactagtaaggctacttttaggggagataccaga 412 || || |||||||||||||||||||| |||| || |||||| | || ||||| ||||| Sbjct: 64467 tcgtattcagtgcaacaaatgggctattatagtgagactacttctcggagagattccaga 64408 Query: 413 gagaactgttttcatgcagaaaggaatgaaggcggctttgacaccatattttgagcttac 472 ||| ||||| ||||||||||| |||||||||| || ||||||| || || |||||||| Sbjct: 64407 gaggactgtgttcatgcagaagggaatgaaggaagcactgacaccctacttcgagcttac 64348 Query: 473 aaatg 477 ||||| Sbjct: 64347 aaatg 64343 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 122 gcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacca 181 |||||||||| | || ||||||||||||||||||||||| || || || | ||||| || Sbjct: 64931 gcaggaaactttgctcaacctgcttcttcgcaattacctccattataatttgtatgatca 64872 Query: 182 ggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatca 232 ||||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 64871 agcagagaaacttaggtcaaaagctcctcgttttgaagcccactccaatca 64821 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 21 tattactcgtatgtccatgaactcaccaacagccttgctgaaattcgtgg 70 |||||||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 65219 tattactcatatgtgcatgaactcaccaacagccttgctgaaatccgtgg 65170 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 522 aaatttgggagcacttttagtgctgacaggacatccaatttgatcgtgag 571 ||||||| |||||||||||||||||||||||| ||||||||| ||||| Sbjct: 64223 aaatttgtgagcacttttagtgctgacaggactcgcaatttgattgtgag 64174
>dbj|D13434.1|DAR21D7A Daucus carota mRNA for 21D7 antigen, complete cds Length = 1816 Score = 167 bits (84), Expect = 5e-38 Identities = 207/248 (83%) Strand = Plus / Plus Query: 57 gctgaaattcgtggaactctccttgggttgcacaggatggcaactttgcaccatgatgag 116 ||||||||||| |||| ||| || | ||||| ||||| ||||| | | |||||||||| Sbjct: 567 gctgaaattcggggaaatctactggccttgcataggattgcaacacttcgccatgatgag 626 Query: 117 cttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatat 176 | || |||||||||||||| || ||||| || |||||||| || |||||||| ||||| Sbjct: 627 ttgggacaggaaactcttctcaatctgctactacgcaattatctccactacaatttatat 686 Query: 177 gaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcagcag 236 ||||||||||| ||||| |||||||||||||| || |||||||| ||||||||||| ||| Sbjct: 687 gaccaggcagagaaactaaggtcaaaggcacctcgatttgaagcccattccaatcaacag 746 Query: 237 ttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacactgat 296 || |||||||| |||| ||| | ||||| |||||||| |||||||| || || |||||| Sbjct: 747 ttttgccgctacttgttttacctaggaaagattagaactattcagctggagtatactgat 806 Query: 297 gctaaaga 304 || ||||| Sbjct: 807 gcgaaaga 814
>dbj|AB001422.1| Nicotiana tabacum mRNA for 21D7, complete cds Length = 1718 Score = 117 bits (59), Expect = 4e-23 Identities = 203/251 (80%) Strand = Plus / Plus Query: 54 cttgctgaaattcgtggaactctccttgggttgcacaggatggcaactttgcaccatgat 113 |||||||||||||| || |||||||| |||||| |||| ||||| || | ||||||| Sbjct: 579 cttgctgaaattcgagggtatctccttgcattgcaccggattgcaacattacgccatgat 638 Query: 114 gagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaaccta 173 ||| | || |||||||| || ||||| ||||| || || ||||| || ||||||||| | Sbjct: 639 gagttgggtcaggaaacactccttaatctgctgctgcggaattatcttcactacaacttg 698 Query: 174 tatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcag 233 || || || ||||| ||| | ||||||||||| || || |||||||| ||||| |||||| Sbjct: 699 tacgatcaagcagagaaattgaggtcaaaggccccccggtttgaagctcattcaaatcag 758 Query: 234 cagttctgccgctatctgttctacttgggaaaaattagaacaattcagctcgaatacact 293 |||||| |||| || || || ||| | ||||| || || ||||| ||||| || |||||| Sbjct: 759 cagttcagccgatacctcttttaccttggaaagatcaggacaatccagctggagtacact 818 Query: 294 gatgctaaaga 304 ||||||||||| Sbjct: 819 gatgctaaaga 829 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Plus Query: 402 gagataccagagagaactgttttcatgcagaaaggaatgaaggcggctttgacaccatat 461 ||||| ||||| || |||||||| ||||||||||| ||| || || || | ||||| Sbjct: 927 gagattccagaaaggactgtttttatgcagaaaggcatggagaaagcattaaggccatac 986 Query: 462 tttgagcttacaaatgctgttcgc 485 |||||||| ||||||||||||||| Sbjct: 987 tttgagctgacaaatgctgttcgc 1010
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 122 gcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacca 181 ||||||||| |||||||| || | ||||| || ||||| ||||||||||||||||| || Sbjct: 396 gcaggaaacacttcttaatttgttacttcgtaactacctccactacaacctatatgatca 455 Query: 182 ggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattccaatcagcag 236 |||||| || | ||||| ||||| || || ||||| |||||||| || |||||| Sbjct: 456 ggcagagaagttgaggtcgaaggctccacgatttgaggcacattcaaaccagcag 510 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 83 gttgcacaggatggcaactttgcaccatgatgagcttgggcagg 126 ||||||| |||| || || |||| ||||||||||||||| |||| Sbjct: 282 gttgcaccggattgctaccttgcgccatgatgagcttggtcagg 325
>ref|NM_106248.2| Arabidopsis thaliana unknown protein AT1G75990 mRNA, complete cds Length = 1646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 288 tacactgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgt 347 ||||| ||||| |||||||| ||| | |||||||| |||||||||| |||| ||| Sbjct: 821 tacaccgatgcaaaagagagtctcctccaagctgctaggaaagcacctgttgcatctctg 880 Query: 348 ggattccgcatccagtgcaacaaatgggctat 379 |||||| | |||||||||||||| |||||||| Sbjct: 881 ggattcagaatccagtgcaacaagtgggctat 912
>ref|NM_101873.2| Arabidopsis thaliana EMB2719 AT1G20200 (EMB2719) mRNA, complete cds Length = 1804 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 111 gatgagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaac 170 |||||||| || |||||||| ||||| |||||| | || || || || |||| |||||| Sbjct: 718 gatgagctgggtcaggaaacccttctgaacctgttgctacgtaactatttgcattacaac 777 Query: 171 ctatatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattc 226 || ||||| |||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 778 ctctatgatcaggcagagaagctaagatcaaaggcacctcgctttgaggctcattc 833
>gb|BT015771.1| Arabidopsis thaliana At1g75990 mRNA, complete cds Length = 1464 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 288 tacactgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgt 347 ||||| ||||| |||||||| ||| | |||||||| |||||||||| |||| ||| Sbjct: 763 tacaccgatgcaaaagagagtctcctccaagctgctaggaaagcacctgttgcatctctg 822 Query: 348 ggattccgcatccagtgcaacaaatgggctat 379 |||||| | |||||||||||||| |||||||| Sbjct: 823 ggattcagaatccagtgcaacaagtgggctat 854
>gb|AY230831.1| Arabidopsis thaliana 26S proteasome subunit RPN3a (RPN3a) mRNA, complete cds Length = 1476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 111 gatgagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaac 170 |||||||| || |||||||| ||||| |||||| | || || || || |||| |||||| Sbjct: 589 gatgagctgggtcaggaaacccttctgaacctgttgctacgtaactatttgcattacaac 648 Query: 171 ctatatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattc 226 || ||||| |||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 649 ctctatgatcaggcagagaagctaagatcaaaggcacctcgctttgaggctcattc 704
>gb|AY120740.1| Arabidopsis thaliana putative proteasome regulatory subunit S3 (At1g20200) mRNA, complete cds Length = 1736 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 111 gatgagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaac 170 |||||||| || |||||||| ||||| |||||| | || || || || |||| |||||| Sbjct: 675 gatgagctgggtcaggaaacccttctgaacctgttgctacgtaactatttgcattacaac 734 Query: 171 ctatatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattc 226 || ||||| |||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 735 ctctatgatcaggcagagaagctaagatcaaaggcacctcgctttgaggctcattc 790
>gb|AY057520.1| Arabidopsis thaliana At1g20200/T20H2_4 mRNA, complete cds Length = 1778 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 111 gatgagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaac 170 |||||||| || |||||||| ||||| |||||| | || || || || |||| |||||| Sbjct: 717 gatgagctgggtcaggaaacccttctgaacctgttgctacgtaactatttgcattacaac 776 Query: 171 ctatatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattc 226 || ||||| |||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 777 ctctatgatcaggcagagaagctaagatcaaaggcacctcgctttgaggctcattc 832
>gb|AY057508.1| Arabidopsis thaliana At1g75990/T4O12_21 mRNA, complete cds Length = 1654 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 288 tacactgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgt 347 ||||| ||||| |||||||| ||| | |||||||| |||||||||| |||| ||| Sbjct: 821 tacaccgatgcaaaagagagtctcctccaagctgctaggaaagcacctgttgcatctctg 880 Query: 348 ggattccgcatccagtgcaacaaatgggctat 379 |||||| | |||||||||||||| |||||||| Sbjct: 881 ggattcagaatccagtgcaacaagtgggctat 912
>emb|BX814379.1|CNS0ADJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1247 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 288 tacactgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgt 347 ||||| ||||| |||||||| ||| | |||||||| |||||||||| |||| ||| Sbjct: 495 tacaccgatgcaaaagagagtctcctccaagctgctaggaaagcacctgttgcatctctg 554 Query: 348 ggattccgcatccagtgcaacaaatgggctat 379 |||||| | |||||||||||||| |||||||| Sbjct: 555 ggattcagaatccagtgcaacaagtgggctat 586
>emb|BX817112.1|CNS0AAOL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 288 tacactgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgt 347 ||||| ||||| |||||||| ||| | |||||||| |||||||||| |||| ||| Sbjct: 802 tacaccgatgcaaaagagagtctcctccaagctgctaggaaagcacctgttgcatctctg 861 Query: 348 ggattccgcatccagtgcaacaaatgggctat 379 |||||| | |||||||||||||| |||||||| Sbjct: 862 ggattcagaatccagtgcaacaagtgggctat 893
>gb|AY088940.1| Arabidopsis thaliana clone 101030 mRNA, complete sequence Length = 1795 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 111 gatgagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaac 170 |||||||| || |||||||| ||||| |||||| | || || || || |||| |||||| Sbjct: 711 gatgagctgggtcaggaaacccttctgaacctgttgctacgtaactatttgcattacaac 770 Query: 171 ctatatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattc 226 || ||||| |||||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 771 ctctatgatcaggcagagaagctaagatcaaaggcacctcgctttgaggctcattc 826
>gb|AC007396.6|AC007396 Genomic sequence for Arabidopsis thaliana BAC T4O12 from chromosome I, complete sequence Length = 95870 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 288 tacactgatgctaaagagagcctcttgcaagctgcacggaaagcacccactgcagctcgt 347 ||||| ||||| |||||||| ||| | |||||||| |||||||||| |||| ||| Sbjct: 74476 tacaccgatgcaaaagagagtctcctccaagctgctaggaaagcacctgttgcatctctg 74417 Query: 348 ggattccgcatccagtgcaacaaatgggctat 379 |||||| | |||||||||||||| |||||||| Sbjct: 74416 ggattcagaatccagtgcaacaagtgggctat 74385 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 147 cttcgcaattacctgcactacaacctatatgaccaggcaga 187 ||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 74784 cttcgcaattatctacactacaacctgtacgaccaagcaga 74744
>emb|BX815258.1|CNS0ADZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1732 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 111 gatgagcttgggcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaac 170 |||||||| || |||||||| ||||| |||||| | || || || || |||| |||||| Sbjct: 634 gatgagctgggtcaggaaacccttctgaacctgttgctacgtaactatttgcattacaac 693 Query: 171 ctatatgaccaggcagaaaaacttaggtcaaaggcaccgcgttttga 217 || ||||| |||||||| || || || ||||||||||| || ||||| Sbjct: 694 ctctatgatcaggcagagaagctaagatcaaaggcacctcgctttga 740
>gb|BC056598.1| Danio rerio proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:65867 IMAGE:6800231), complete cds Length = 1822 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggcaga 187 |||||||| || ||||| |||||||| |||||||| || ||||||||||| Sbjct: 776 aacctgctgctgcgcaactacctgcagtacaacctgtacgaccaggcaga 825
>ref|NM_200572.1| Danio rerio proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (psmd3), mRNA Length = 1822 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggcaga 187 |||||||| || ||||| |||||||| |||||||| || ||||||||||| Sbjct: 776 aacctgctgctgcgcaactacctgcagtacaacctgtacgaccaggcaga 825
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 50.1 bits (25), Expect = 0.008 Identities = 85/105 (80%) Strand = Plus / Plus Query: 122 gcaggaaactcttcttaacctgcttcttcgcaattacctgcactacaacctatatgacca 181 ||||||||| ||||| |||||| | || || || || |||| |||||||| ||||| || Sbjct: 8943 gcaggaaacccttctgaacctgttgctacgtaactatttgcattacaacctctatgatca 9002 Query: 182 ggcagaaaaacttaggtcaaaggcaccgcgttttgaagcacattc 226 |||||| || || || ||||||||||| || ||||| || ||||| Sbjct: 9003 ggcagagaagctaagatcaaaggcacctcgctttgaggctcattc 9047
>gb|BC003197.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, mRNA (cDNA clone MGC:6405 IMAGE:3586427), complete cds Length = 2167 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 918 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 964
>ref|NM_009439.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (Psmd3), mRNA Length = 2167 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 918 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 964
>dbj|AK145488.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0005F20 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2133 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 907 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 953
>dbj|AK145467.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I0C0050K24 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2135 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 908 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 954
>dbj|AK153505.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830168I21 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2061 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 835 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 881
>dbj|AK164593.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430023L19 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2133 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 907 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 953
>dbj|AK166714.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0006H21 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2132 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 906 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 952
>dbj|AK166683.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0002D17 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2104 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 878 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 924
>dbj|AK165520.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530214E24 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2078 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 853 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 899
>dbj|AK164333.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130052M17 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2851 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 882 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 928
>dbj|AK169690.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007N14 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2133 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 907 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 953
>dbj|AK167285.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0050H01 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2099 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 873 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 919
>dbj|AK167005.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0027F13 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2120 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 893 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 939
>dbj|AK003024.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710007M10 product:Warning: possibly reversed clone, full insert sequence Length = 619 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 251 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 205
>dbj|AK077252.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031425O21 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2093 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 867 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 913
>dbj|AK031366.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030413L20 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2895 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 908 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 954
>dbj|AK089933.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430005P21 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, full insert sequence Length = 2107 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 876 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 922
>gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosome unknown, complete sequence Length = 229445 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 420 gttttcatgcagaaaggaatgaa 442 ||||||||||||||||||||||| Sbjct: 13861 gttttcatgcagaaaggaatgaa 13883
>emb|AL590963.11| Mouse DNA sequence from clone RP23-395E10 on chromosome 11, complete sequence Length = 196724 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 168047 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 168001
>gb|M25149.1|MUSANTP91A Mouse Tum-P91A antigen gene, complete cds Length = 13704 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 aacctgcttcttcgcaattacctgcactacaacctatatgaccaggc 184 ||||| || ||||| |||||||||||||||| | | ||||||||||| Sbjct: 8245 aacctcctgcttcggaattacctgcactacagcttgtatgaccaggc 8291
>gb|AF196968.5| Homo sapiens chromosome 3 clone RP1-77H17 map q21.3, complete sequence Length = 103704 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 aaaaattagaacaattcagct 283 ||||||||||||||||||||| Sbjct: 74355 aaaaattagaacaattcagct 74335
>emb|AL449210.5|HS519C2 Homo sapiens chromosome 3 sequence from PAC RPCI-3 519C2 map 3q21 region D3S3607-D3S1587, complete sequence Length = 169774 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 aaaaattagaacaattcagct 283 ||||||||||||||||||||| Sbjct: 113748 aaaaattagaacaattcagct 113728
>gb|AC092549.14| Homo sapiens 3 BAC RP11-571C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95910 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aaaaattagaacaattcagct 283 ||||||||||||||||||||| Sbjct: 57027 aaaaattagaacaattcagct 57047
>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence Length = 142656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tctacttgggaaaaattagaa 273 ||||||||||||||||||||| Sbjct: 137731 tctacttgggaaaaattagaa 137751
>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence Length = 154939 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tctacttgggaaaaattagaa 273 ||||||||||||||||||||| Sbjct: 88719 tctacttgggaaaaattagaa 88739
>gb|AC141634.4| Mus musculus BAC clone RP24-69A18 from chromosome 6, complete sequence Length = 227680 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 aaaaacttaggtcaaaggcac 207 ||||||||||||||||||||| Sbjct: 37117 aaaaacttaggtcaaaggcac 37137
>gb|AC122387.3| Mus musculus BAC clone RP24-76F22 from 6, complete sequence Length = 191058 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 aaaaacttaggtcaaaggcac 207 ||||||||||||||||||||| Sbjct: 172036 aaaaacttaggtcaaaggcac 172056
>gb|AF217273.1| Oncorhynchus mykiss cytochrome P450 11beta2 mRNA, complete cds Length = 1882 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 atgaactcaccaacagcctt 56 |||||||||||||||||||| Sbjct: 1789 atgaactcaccaacagcctt 1808
>gb|AC114536.18| Mus musculus chromosome 1, clone RP23-42M9, complete sequence Length = 193978 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tattttgagcttacaaatgc 478 |||||||||||||||||||| Sbjct: 168967 tattttgagcttacaaatgc 168986
>gb|AC162169.4| Mus musculus chromosome 1, clone RP24-268D20, complete sequence Length = 158792 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tattttgagcttacaaatgc 478 |||||||||||||||||||| Sbjct: 65304 tattttgagcttacaaatgc 65323
>gb|AC183831.2| Pan troglodytes BAC clone CH251-280E18 from chromosome 7, complete sequence Length = 169210 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 caggcagaaaaacttaggtcaaag 203 |||||||||||||| ||||||||| Sbjct: 115573 caggcagaaaaactgaggtcaaag 115596
>emb|AL391277.16| Human DNA sequence from clone RP11-357C3 on chromosome X, complete sequence Length = 194456 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 catgcagaaaggaatgaagg 444 |||||||||||||||||||| Sbjct: 19245 catgcagaaaggaatgaagg 19226
>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence Length = 172123 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 agagcctcttgcaagctgca 323 |||||||||||||||||||| Sbjct: 87078 agagcctcttgcaagctgca 87097
>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence Length = 189732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 agagcctcttgcaagctgca 323 |||||||||||||||||||| Sbjct: 167364 agagcctcttgcaagctgca 167383
>gb|AC006329.5| Homo sapiens BAC clone RP11-132A1 from 7, complete sequence Length = 145253 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 caggcagaaaaacttaggtcaaag 203 |||||||||||||| ||||||||| Sbjct: 101512 caggcagaaaaactgaggtcaaag 101489
>gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p, complete sequence Length = 189723 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 catgcagaaaggaatgaagg 444 |||||||||||||||||||| Sbjct: 58879 catgcagaaaggaatgaagg 58860 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,575,046 Number of Sequences: 3902068 Number of extensions: 4575046 Number of successful extensions: 90274 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90101 Number of HSP's gapped (non-prelim): 168 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)