| Clone Name | bags34d07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128A13, full insert sequence Length = 1321 Score = 626 bits (316), Expect = e-176 Identities = 546/623 (87%) Strand = Plus / Plus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 154 gagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctc 213 Query: 65 ggcaagctcaaggaggagaatgtgagcacattgacgattctggtgatggggaagggcggt 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 214 ggcaagctcaaggaggagaatgtgagcacattgacaattctggtgatggggaagggcggg 273 Query: 125 gtggggaagtcatccactgtcaactccattgtcggggagagggtcgcaaacgtcagcgcg 184 ||||||||||||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 274 gtggggaagtcatccaccgtcaactccatcgttggcgagagggtcgctactgtcagcgcc 333 Query: 185 ttccagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttg 244 |||||||| |||||||| | ||| |||||||| || |||||||||||||| ||||||||| Sbjct: 334 ttccagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttg 393 Query: 245 aacattatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgag 304 |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 394 aacattattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgag 453 Query: 305 atcataaagaggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttg 364 |||||||| ||||||||||||| |||||||||||||||||||| || || ||||| ||| Sbjct: 454 atcataaaaaggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattg 513 Query: 365 gatacatatagaatggatacattggatgaacaagttataagagccatcactagttcactt 424 ||| |||| |||||||| || |||||||| |||||||| ||||| |||| | |||| || Sbjct: 514 gatgcatacagaatggacacgttggatgatcaagttattagagctgtcaccaattcattt 573 Query: 425 gggaaggccatttggagaagaaccttggttgtattgacccatgcccaactctccccacct 484 || |||||||||||| ||||||| ||||||||||| || ||||| || ||||| |||||| Sbjct: 574 ggaaaggccatttggcgaagaacattggttgtattaacacatgctcagctctcaccacct 633 Query: 485 gatggaatcgactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatc 544 |||||| | |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || Sbjct: 634 gatggacttgactataacgatttctttacaaaaagatctgagtcacttttgcgatacatt 693 Query: 545 cgttctggtgcaggaatcggcaaaagagaatatgcggattttcccttgccaatagctttg 604 ||| ||||||||||| || ||||| ||||| || |||||||||||||||||| || ||| Sbjct: 694 cgtgctggtgcaggagtcagcaaacgagaacttggggattttcccttgccaattgcattg 753 Query: 605 gcagagaacagtggaaggtgcaa 627 | |||||||||||||||||||| Sbjct: 754 gtggagaacagtggaaggtgcaa 776
>gb|AY107292.1| Zea mays PCO067487 mRNA sequence Length = 1391 Score = 615 bits (310), Expect = e-173 Identities = 546/625 (87%) Strand = Plus / Plus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| || ||||| || ||| ||||||| ||||||||| Sbjct: 197 gagtgggtcgggctgcagcagtttcctccggccacccagaccgagctgcacgagctcctc 256 Query: 65 ggcaagctcaaggaggagaatgtgagcacattgacgattctggtgatggggaagggcggt 124 |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 257 ggcaagctcaaggaggaggatgtgagcacattgacaattctggtgatggggaaaggcgga 316 Query: 125 gtggggaagtcatccactgtcaactccattgtcggggagagggtcgcaaacgtcagcgcg 184 |||||||||||||| ||||| |||||||| |||||||||||| |||| | |||||||| Sbjct: 317 gtggggaagtcatctactgttaactccatcgtcggggagaggatcgccactgtcagcgct 376 Query: 185 ttccagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttg 244 ||||||||||||||||||| || |||||||| || ||||| |||||||| ||||||||| Sbjct: 377 ttccagtctgagggtctgagaccgatgatgtggtcgcgcacaagggcagggttcaccttg 436 Query: 245 aacattatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgag 304 ||||||||||||||||||||||| ||||||||||| || || ||||||||||| ||||| Sbjct: 437 aacattatcgacactcctgggcttattgaaggtggatacattaatgagcaggccgttgac 496 Query: 305 atcataaagaggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttg 364 ||||| ||||| |||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct: 497 atcattaagagatttcttctaggcaagactattgatgttctcctgtacgtggatcgtttg 556 Query: 365 gatacatatagaatggatacattggatgaacaagttataagagccatcactagttcactt 424 ||| | ||||||||||||||| |||||||||| ||||||||||||||||| | |||| || Sbjct: 557 gatgcgtatagaatggatacactggatgaacaggttataagagccatcaccaattcattt 616 Query: 425 gggaaggccatttggagaagaaccttggttgtattgacccatgcccaactctccccacct 484 || || | |||||| ||||| | |||||||| ||||||||||| |||||||| |||||| Sbjct: 617 ggaaaagatatttggcgaagatcattggttgtgttgacccatgctcaactctcaccacct 676 Query: 485 gatggaatcgactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatc 544 |||||||||||||||||||||||| || |||||||||||||| | ||| ||||||| ||| Sbjct: 677 gatggaatcgactataatgatttctttacaagaagatcagaggcacttttgcgatacatc 736 Query: 545 cgttctggtgcaggaatcggcaaaagagaatatgcggattttcccttgccaatagctttg 604 | || || ||||||||| ||| ||||||||| |||||| || ||||||||||| ||| Sbjct: 737 cactcgggagcaggaatcaagaaacgagaatatggggatttccctttgccaatagcattg 796 Query: 605 gcagagaacagtggaaggtgcaaga 629 | ||||||||||||||||||||||| Sbjct: 797 gtagagaacagtggaaggtgcaaga 821
>dbj|AK058676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H08, full insert sequence Length = 1406 Score = 611 bits (308), Expect = e-171 Identities = 544/623 (87%) Strand = Plus / Plus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 231 gagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctc 290 Query: 65 ggcaagctcaaggaggagaatgtgagcacattgacgattctggtgatggggaagggcggt 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 291 ggcaagctcaaggaggagaatgtgagcacattgacaattctggtgatggggaagggcggg 350 Query: 125 gtggggaagtcatccactgtcaactccattgtcggggagagggtcgcaaacgtcagcgcg 184 ||||||||||||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 351 gtggggaagtcatccaccgtcaactccatcgttggcgagagggtcgctactgtcagcgcc 410 Query: 185 ttccagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttg 244 |||||||| |||||||| | ||| |||||||| || |||||||||||||| ||||||||| Sbjct: 411 ttccagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttg 470 Query: 245 aacattatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgag 304 |||||||| |||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 471 aacattattgacactcctgggctcattgaaggtggatacaccaatgagcaggctgttgag 530 Query: 305 atcataaagaggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttg 364 |||||||| ||||||||||||| |||||||| ||||||||||| || || ||||| ||| Sbjct: 531 atcataaaaaggtttcttctgggcaagactatcgatgtcctcctttatgtggatcgattg 590 Query: 365 gatacatatagaatggatacattggatgaacaagttataagagccatcactagttcactt 424 ||| |||| |||||||| || |||||||| |||||||| ||||| |||| | |||| || Sbjct: 591 gatgcatacagaatggacacgttggatgatcaagttattagagctgtcaccaattcattt 650 Query: 425 gggaaggccatttggagaagaaccttggttgtattgacccatgcccaactctccccacct 484 || |||||||||||| ||||||| ||||||||||| || ||||| || ||||| |||||| Sbjct: 651 ggaaaggccatttggcgaagaacattggttgtattaacacatgctcagctctcaccacct 710 Query: 485 gatggaatcgactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatc 544 |||||| | |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || Sbjct: 711 gatggacttgactataacgatttctttacaaaaagatctgagtcacttttgcgatacatt 770 Query: 545 cgttctggtgcaggaatcggcaaaagagaatatgcggattttcccttgccaatagctttg 604 ||| ||||||||||| || ||||| ||||| || |||||||||||||||||| || ||| Sbjct: 771 cgtgctggtgcaggagtcagcaaacgagaacttggggattttcccttgccaattgcattg 830 Query: 605 gcagagaacagtggaaggtgcaa 627 | |||||||||||||||||||| Sbjct: 831 gtggagaacagtggaaggtgcaa 853
>emb|AJ271049.1|ZMA271049 Zea mays mRNA for Toc34-2 protein (toc34B gene) Length = 1313 Score = 591 bits (298), Expect = e-165 Identities = 543/625 (86%) Strand = Plus / Plus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| |||||||| | ||||||||||| || |||||| Sbjct: 154 gagtgggtcgggctgcagcagtttccggcggctacacagaccaagctgcacgaactcctc 213 Query: 65 ggcaagctcaaggaggagaatgtgagcacattgacgattctggtgatggggaagggcggt 124 ||||| |||||||||||| ||||||||||||| || ||||||||||||||||| || || Sbjct: 214 ggcaaactcaaggaggaggatgtgagcacattaacaattctggtgatggggaaaggtgga 273 Query: 125 gtggggaagtcatccactgtcaactccattgtcggggagagggtcgcaaacgtcagcgcg 184 |||||||||||||||||||| |||||||| || ||||||||||| || |||||||| Sbjct: 274 gtggggaagtcatccactgttaactccatcgttggggagagggttgcctctgtcagcgct 333 Query: 185 ttccagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttg 244 ||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 334 ttccagtctgagggtctgagaccaatgatgtgctcgcgcacaagggcagggttcactttg 393 Query: 245 aacattatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgag 304 ||||||||||||||||||||||| ||||||||||| || || ||||||||||| ||||| Sbjct: 394 aacattatcgacactcctgggcttattgaaggtggatacattaatgagcaggccgttgac 453 Query: 305 atcataaagaggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttg 364 ||||| ||||| |||||||| | |||||||| ||||| ||||||||||| ||||||||| Sbjct: 454 atcattaagagatttcttctaggcaagactatcgatgttctcctgtacgtggatcgtttg 513 Query: 365 gatacatatagaatggatacattggatgaacaagttataagagccatcactagttcactt 424 ||| | ||||||||||||||| |||||||||| ||||||||||||||||| | |||| || Sbjct: 514 gatgcgtatagaatggatacactggatgaacaggttataagagccatcaccaattcattt 573 Query: 425 gggaaggccatttggagaagaaccttggttgtattgacccatgcccaactctccccacct 484 || || | |||||| ||||| | |||||||| ||||||||||| |||||||| |||||| Sbjct: 574 ggaaaagatatttggcgaagatcattggttgtgttgacccatgctcaactctcaccacct 633 Query: 485 gatggaatcgactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatc 544 |||||||||||||||||||||||| || |||||||||||||| | ||| ||||||| ||| Sbjct: 634 gatggaatcgactataatgatttctttacaagaagatcagaggcacttttgcgatacatc 693 Query: 545 cgttctggtgcaggaatcggcaaaagagaatatgcggattttcccttgccaatagctttg 604 | || || ||||||||| |||| ||||||||| |||||| |||||||||||||| ||| Sbjct: 694 cactcaggagcaggaatcaacaaacgagaatatggggatttccccttgccaatagcattg 753 Query: 605 gcagagaacagtggaaggtgcaaga 629 | |||||||||||||||||||||| Sbjct: 754 gtggagaacagtggaaggtgcaaga 778
>emb|AJ245968.2|ZMA245968 Zea mays mRNA for Toc34-1 protein (toc34A gene) Length = 1233 Score = 583 bits (294), Expect = e-163 Identities = 542/625 (86%) Strand = Plus / Plus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| || ||||| || ||| ||||||| ||||||||| Sbjct: 108 gagtgggtcgggctgcagcagtttcctccggccacccagaccgagctgcacgagctcctc 167 Query: 65 ggcaagctcaaggaggagaatgtgagcacattgacgattctggtgatggggaagggcggt 124 |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 168 ggcaagctcaaggaggaggatgtgagcacattgacaattctggtgatggggaaaggcgga 227 Query: 125 gtggggaagtcatccactgtcaactccattgtcggggagagggtcgcaaacgtcagcgcg 184 |||||||||||||| ||||| |||||||| |||||||||||| |||| | |||||||| Sbjct: 228 gtggggaagtcatctactgttaactccatcgtcggggagaggatcgccactgtcagcgct 287 Query: 185 ttccagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttg 244 ||||||||||||||||||| || |||||||| || ||||| |||||||| ||||||||| Sbjct: 288 ttccagtctgagggtctgagaccgatgatgtggtcgcgcacaagggcagggttcaccttg 347 Query: 245 aacattatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgag 304 ||||||||||||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 348 aacattatcgacactcctgggcttattgaaggtggatacattaatgagcaggctgttgac 407 Query: 305 atcataaagaggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttg 364 ||||| ||||| |||||||||| |||||||||||||| |||||||| || ||||||||| Sbjct: 408 atcattaagagatttcttctgggcaagactattgatgttctcctgtatgtggatcgtttg 467 Query: 365 gatacatatagaatggatacattggatgaacaagttataagagccatcactagttcactt 424 ||| | || |||||||||||| | |||| ||| ||||||||||||||||| | |||| || Sbjct: 468 gatgcgtacagaatggatacacttgatggacaggttataagagccatcaccaattcattt 527 Query: 425 gggaaggccatttggagaagaaccttggttgtattgacccatgcccaactctccccacct 484 || || | |||||| ||||| | |||||||| ||||||||||| |||||||| |||||| Sbjct: 528 ggaaaagatatttggcgaagatcattggttgtgttgacccatgctcaactctcaccacct 587 Query: 485 gatggaatcgactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatc 544 ||||||||||| |||||||||||| || ||||||| |||||| | ||| ||||||| ||| Sbjct: 588 gatggaatcgagtataatgatttctttacaagaaggtcagaggcacttttgcgatacatc 647 Query: 545 cgttctggtgcaggaatcggcaaaagagaatatgcggattttcccttgccaatagctttg 604 | || || ||||||||| ||| ||||||||| |||||| || ||||||||||| ||| Sbjct: 648 cactcgggagcaggaatcaagaaacgagaatatggggatttccctttgccaatagcattg 707 Query: 605 gcagagaacagtggaaggtgcaaga 629 | ||||||||||||||||||||||| Sbjct: 708 gtagagaacagtggaaggtgcaaga 732
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 4e-48 Identities = 221/261 (84%) Strand = Plus / Minus Query: 314 aggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttggatacatat 373 ||||||||||||| |||||||||||||||||||| || || ||||| |||||| |||| Sbjct: 7405763 aggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatac 7405704 Query: 374 agaatggatacattggatgaacaagttataagagccatcactagttcacttgggaaggcc 433 |||||||| || |||||||| |||||||| ||||| |||| | |||| |||| |||||| Sbjct: 7405703 agaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggcc 7405644 Query: 434 atttggagaagaaccttggttgtattgacccatgcccaactctccccacctgatggaatc 493 |||||| ||||||| ||||||||||| || ||||| || ||||| |||||||||||| | Sbjct: 7405643 atttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggactt 7405584 Query: 494 gactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatccgttctggt 553 |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || ||| ||||| Sbjct: 7405583 gactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggt 7405524 Query: 554 gcaggaatcggcaaaagagaa 574 |||||| || ||||| ||||| Sbjct: 7405523 gcaggagtcagcaaacgagaa 7405503 Score = 170 bits (86), Expect = 4e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 188 cagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttgaac 247 ||||| |||||||| | ||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 7406905 cagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaac 7406846 Query: 248 attatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgagatc 307 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 7406845 attattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatc 7406786 Query: 308 ataaagaggt 317 ||||| |||| Sbjct: 7406785 ataaaaaggt 7406776 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 81 agaatgtgagcacattgacgattctggtgatggggaagggcggtgtggggaagtcatcca 140 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 7407100 agaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatcca 7407041 Query: 141 ctgtcaactccattgtcggggagagggtcgcaaacgtcagcgcgttccag 190 | ||||||||||| || || ||||||||||| | |||||||| |||||| Sbjct: 7407040 ccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccag 7406991 Score = 85.7 bits (43), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 7407344 gagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctc 7407285 Query: 65 ggcaagctcaaggaggag 82 |||||||||||||||||| Sbjct: 7407284 ggcaagctcaaggaggag 7407267 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 |||||||||||||||||| || |||| |||||||||||||||||||| Sbjct: 7404445 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaa 7404398
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 200 bits (101), Expect = 4e-48 Identities = 221/261 (84%) Strand = Plus / Minus Query: 314 aggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttggatacatat 373 ||||||||||||| |||||||||||||||||||| || || ||||| |||||| |||| Sbjct: 44318 aggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatac 44259 Query: 374 agaatggatacattggatgaacaagttataagagccatcactagttcacttgggaaggcc 433 |||||||| || |||||||| |||||||| ||||| |||| | |||| |||| |||||| Sbjct: 44258 agaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggcc 44199 Query: 434 atttggagaagaaccttggttgtattgacccatgcccaactctccccacctgatggaatc 493 |||||| ||||||| ||||||||||| || ||||| || ||||| |||||||||||| | Sbjct: 44198 atttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggactt 44139 Query: 494 gactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatccgttctggt 553 |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || ||| ||||| Sbjct: 44138 gactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggt 44079 Query: 554 gcaggaatcggcaaaagagaa 574 |||||| || ||||| ||||| Sbjct: 44078 gcaggagtcagcaaacgagaa 44058 Score = 170 bits (86), Expect = 4e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 188 cagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttgaac 247 ||||| |||||||| | ||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 45460 cagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaac 45401 Query: 248 attatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgagatc 307 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 45400 attattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatc 45341 Query: 308 ataaagaggt 317 ||||| |||| Sbjct: 45340 ataaaaaggt 45331 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 81 agaatgtgagcacattgacgattctggtgatggggaagggcggtgtggggaagtcatcca 140 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 45655 agaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatcca 45596 Query: 141 ctgtcaactccattgtcggggagagggtcgcaaacgtcagcgcgttccag 190 | ||||||||||| || || ||||||||||| | |||||||| |||||| Sbjct: 45595 ccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccag 45546 Score = 85.7 bits (43), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 45899 gagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctc 45840 Query: 65 ggcaagctcaaggaggag 82 |||||||||||||||||| Sbjct: 45839 ggcaagctcaaggaggag 45822 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 |||||||||||||||||| || |||| |||||||||||||||||||| Sbjct: 43000 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaa 42953
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 4e-48 Identities = 221/261 (84%) Strand = Plus / Minus Query: 314 aggtttcttctggagaagactattgatgtcctcctgtacgttgatcgtttggatacatat 373 ||||||||||||| |||||||||||||||||||| || || ||||| |||||| |||| Sbjct: 7403598 aggtttcttctgggcaagactattgatgtcctcctttatgtggatcgattggatgcatac 7403539 Query: 374 agaatggatacattggatgaacaagttataagagccatcactagttcacttgggaaggcc 433 |||||||| || |||||||| |||||||| ||||| |||| | |||| |||| |||||| Sbjct: 7403538 agaatggacacgttggatgatcaagttattagagctgtcaccaattcatttggaaaggcc 7403479 Query: 434 atttggagaagaaccttggttgtattgacccatgcccaactctccccacctgatggaatc 493 |||||| ||||||| ||||||||||| || ||||| || ||||| |||||||||||| | Sbjct: 7403478 atttggcgaagaacattggttgtattaacacatgctcagctctcaccacctgatggactt 7403419 Query: 494 gactataatgatttccttgcaagaagatcagagtcgcttgtgcgatatatccgttctggt 553 |||||||| |||||| || ||| |||||| ||||| ||| ||||||| || ||| ||||| Sbjct: 7403418 gactataacgatttctttacaaaaagatctgagtcacttttgcgatacattcgtgctggt 7403359 Query: 554 gcaggaatcggcaaaagagaa 574 |||||| || ||||| ||||| Sbjct: 7403358 gcaggagtcagcaaacgagaa 7403338 Score = 170 bits (86), Expect = 4e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 188 cagtctgagggtctgatgccaatgatgtgctcccgcaccagggcaggattcaccttgaac 247 ||||| |||||||| | ||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 7404740 cagtccgagggtctcaggccgatgatgtgttctcgcaccagggcaggcttcaccttgaac 7404681 Query: 248 attatcgacactcctgggctcattgaaggtgggtatatcaatgagcaggctgttgagatc 307 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 7404680 attattgacactcctgggctcattgaaggtggatacatcaatgagcaggctgttgagatc 7404621 Query: 308 ataaagaggt 317 ||||| |||| Sbjct: 7404620 ataaaaaggt 7404611 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 81 agaatgtgagcacattgacgattctggtgatggggaagggcggtgtggggaagtcatcca 140 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 7404935 agaatgtgagcacattgacaattctggtgatggggaagggcggggtggggaagtcatcca 7404876 Query: 141 ctgtcaactccattgtcggggagagggtcgcaaacgtcagcgcgttccag 190 | ||||||||||| || || ||||||||||| | |||||||| |||||| Sbjct: 7404875 ccgtcaactccatcgttggcgagagggtcgctactgtcagcgccttccag 7404826 Score = 85.7 bits (43), Expect = 2e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 5 gagtgggttggtctgcagcagttcccggcggcccccagnaccaagctgcatgagctcctc 64 |||||||| || ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 7405179 gagtgggtggggctgcagcagtttccggcggctacccagaccaagctgcacgagctcctc 7405120 Query: 65 ggcaagctcaaggaggag 82 |||||||||||||||||| Sbjct: 7405119 ggcaagctcaaggaggag 7405102 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 |||||||||||||||||| || |||| |||||||||||||||||||| Sbjct: 7402280 ggattttcccttgccaattgcattggtggagaacagtggaaggtgcaa 7402233
>gb|DQ228327.1| Solanum tuberosum clone 135F10 GTP-binding-like protein mRNA, complete cds Length = 1129 Score = 83.8 bits (42), Expect = 6e-13 Identities = 126/154 (81%) Strand = Plus / Plus Query: 228 gggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatca 287 |||||| ||| || ||||||||||||||||| || ||||| ||||||| || ||| ||| Sbjct: 260 gggcagaatttacattgaacattatcgacacccccgggctggttgaaggaggatatgtca 319 Query: 288 atgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcctcc 347 |||| |||||| |||| ||||||||||||| || ||| | ||||| |||||||| | | Sbjct: 320 atgaccaggctcttgatctcataaagaggttcctcctgaacaagacaattgatgttttgc 379 Query: 348 tgtacgttgatcgtttggatacatatagaatgga 381 | || || |||||| | |||||||||||| |||| Sbjct: 380 tctatgtggatcgtcttgatacatatagagtgga 413
>gb|BT014489.1| Lycopersicon esculentum clone 133849F, mRNA sequence Length = 1430 Score = 79.8 bits (40), Expect = 1e-11 Identities = 121/148 (81%) Strand = Plus / Plus Query: 228 gggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatca 287 |||||| ||| || ||||||||||||||||| || ||||| ||||||| || ||| ||| Sbjct: 308 gggcagaatttacattgaacattatcgacacccccgggctggttgaaggaggatatgtca 367 Query: 288 atgagcaggctgttgagatcataaagaggtttcttctggagaagactattgatgtcctcc 347 |||| |||||| |||| ||||||||||||| || ||| | ||||| |||||||| | | Sbjct: 368 atgaccaggctcttgatctcataaagaggttcctcctgaacaagacaattgatgttttgc 427 Query: 348 tgtacgttgatcgtttggatacatatag 375 | || || |||||| | ||||||||||| Sbjct: 428 tttatgtggatcgtcttgatacatatag 455
>emb|Z28341.1|PSCLOEP P.sativum (miranda) mRNA for chloroplast outer envelope protein 34 Length = 1303 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 227 agggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatc 286 |||||||| || || ||||||||||||||||||||||| || |||||||| || || ||| Sbjct: 320 agggcaggttttacattgaacattatcgacactcctggtcttattgaagggggatacatc 379 Query: 287 aatga 291 ||||| Sbjct: 380 aatga 384
>gb|L36856.1|PEAIAP34A Pisum sativum GTP-binding protein (IAP34) mRNA, complete cds Length = 1322 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 227 agggcaggattcaccttgaacattatcgacactcctgggctcattgaaggtgggtatatc 286 |||||||| || || ||||||||||||||||||||||| || |||||||| || || ||| Sbjct: 347 agggcaggttttacattgaacattatcgacactcctggtcttattgaagggggatacatc 406 Query: 287 aatga 291 ||||| Sbjct: 407 aatga 411
>gb|AC149134.2| Medicago truncatula, complete sequence Length = 133336 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 242 ttgaacattatcgacactcctgggctcattgaaggtgggtatatcaatga 291 |||||||||||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 114273 ttgaacattatcgatactcctggtcttattgaaggggggtacatcaatga 114224 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 107 gtgatggggaagggcggtgtggggaagtcatccactgtcaactc 150 ||||||||||| |||||||| || ||||| || ||||| ||||| Sbjct: 114509 gtgatggggaaaggcggtgtcggaaagtcttcaactgtgaactc 114466
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 77365 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaa 77318
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 97078 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaa 97125
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 14704812 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaa 14704859
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 11269377 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaa 11269330
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 9723887 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaa 9723840
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 121367 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaa 121320
>dbj|AK069144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005J09, full insert sequence Length = 3631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 2839 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaa 2886
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 11275817 ggattttcccttgccaataatattggtggagaacagtggaaggtgcaa 11275770
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 14659096 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaa 14659143
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 39273 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaa 39226
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 580 ggattttcccttgccaatagctttggcagagaacagtggaaggtgcaa 627 ||||||||||||||||||||| |||| |||| |||||||||||||| Sbjct: 113987 ggattttcccttgccaatagcattggtggagataagtggaaggtgcaa 113940
>gb|DQ486738.1| Brassica napus chloroplast TOC33-like protein gene, 5' UTR and partial cds; nuclear gene for chloroplast product Length = 613 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 110 atggggaagggcggtgtggggaagtcatccactgtcaactc 150 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 323 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 363
>gb|AY369784.1| Brassica napus TOC33-like protein gene, complete cds; nuclear gene for chloroplast product Length = 1490 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 110 atggggaagggcggtgtggggaagtcatccactgtcaactc 150 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 206 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 246
>gb|AY332619.1| Brassica napus TOC33 (Toc33) mRNA, complete cds; nuclear gene for chloroplast product Length = 894 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 110 atggggaagggcggtgtggggaagtcatccactgtcaactc 150 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 124 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 164
>gb|AY325803.1| Brassica napus TOC33 (Toc33) mRNA, complete cds Length = 894 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 110 atggggaagggcggtgtggggaagtcatccactgtcaactc 150 ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 124 atgggcaaaggcggtgtgggaaaatcatccactgtcaactc 164
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 tcctcggcaagctcaaggaggag 82 ||||||||||||||||||||||| Sbjct: 231474 tcctcggcaagctcaaggaggag 231452
>gb|DQ397347.1| Uncultured archaeon clone 02N1AC4 16S ribosomal RNA gene, partial sequence Length = 1090 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cgtcagcgcgttccagtctga 195 ||||||||||||||||||||| Sbjct: 569 cgtcagcgcgttccagtctga 549
>gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for chloroplast product Length = 1376 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 110 atggggaagggcggtgtggggaagtcatccactgtcaactc 150 ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 202 atgggtaaaggcggtgtgggaaaatcatcgactgtcaactc 242 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 445 aaccttggttgtattgacccatgcccaactctccccacctgatg 488 ||||||| |||| ||||| ||||| || ||||||||||||||| Sbjct: 690 aaccttgcttgttttgactcatgctcagttctccccacctgatg 733
>emb|AJ719980.1| Gallus gallus mRNA for hypothetical protein, clone 9a23 Length = 1663 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gggaagggcggtgtggggaag 133 ||||||||||||||||||||| Sbjct: 92 gggaagggcggtgtggggaag 112
>ref|NM_001007833.1| Gallus gallus nucleotide binding protein 2 (MinD homolog, E. coli) (NUBP2), mRNA Length = 1663 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gggaagggcggtgtggggaag 133 ||||||||||||||||||||| Sbjct: 92 gggaagggcggtgtggggaag 112
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 ggttgtattgacccatgccca 471 ||||||||||||||||||||| Sbjct: 2113379 ggttgtattgacccatgccca 2113359
>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 194439 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 agaacagtggaaggtgcaaga 629 ||||||||||||||||||||| Sbjct: 92614 agaacagtggaaggtgcaaga 92634
>ref|XM_512123.1| PREDICTED: Pan troglodytes KIAA0427 (LOC455409), mRNA Length = 5226 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 gacccatgcccaactctccccacc 483 ||||||| |||||||||||||||| Sbjct: 3013 gacccatccccaactctccccacc 3036
>ref|XM_369101.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00143.4) partial mRNA Length = 1293 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cctcggcaagctcaaggaggagaa 84 |||||||||||||| ||||||||| Sbjct: 1203 cctcggcaagctcatggaggagaa 1226
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence Length = 176607 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 592 gccaatagctttggcagaga 611 |||||||||||||||||||| Sbjct: 108784 gccaatagctttggcagaga 108765
>ref|XM_983313.1| PREDICTED: Mus musculus similar to ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) (LOC670796), mRNA Length = 8795 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gaggagaatgtgagcacatt 96 |||||||||||||||||||| Sbjct: 7145 gaggagaatgtgagcacatt 7164
>ref|XM_911012.2| PREDICTED: Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) (Arfgef2), mRNA Length = 8795 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gaggagaatgtgagcacatt 96 |||||||||||||||||||| Sbjct: 7145 gaggagaatgtgagcacatt 7164
>ref|XM_130646.7| PREDICTED: Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) (Arfgef2), mRNA Length = 8795 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gaggagaatgtgagcacatt 96 |||||||||||||||||||| Sbjct: 7145 gaggagaatgtgagcacatt 7164
>gb|AY369783.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for chloroplast product Length = 1370 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 445 aaccttggttgtattgacccatgcccaactctccccacctgatg 488 ||||||| |||| ||||| ||||| || ||||||||||||||| Sbjct: 688 aaccttgcttgttttgactcatgctcagttctccccacctgatg 731
>emb|BX323064.13| Zebrafish DNA sequence from clone DKEYP-13D12 in linkage group 2, complete sequence Length = 170480 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 atggggaagggcggtgtggggaag 133 |||||||||||| ||||||||||| Sbjct: 118179 atggggaagggcagtgtggggaag 118156
>emb|AL589655.5| Human DNA sequence from clone RP11-420A21 on chromosome 6 Contains a pseudogene similar to an integrin Alpha-E precursor fragment and part of the TEX27 gene for testis expressed sequence 27 (FLJ13222), complete sequence Length = 160789 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 435 tttggagaag-aaccttggttgtattga 461 |||||||||| ||||||||||||||||| Sbjct: 130052 tttggagaagtaaccttggttgtattga 130079
>ref|XM_503499.1| Yarrowia lipolytica CLIB122, YALI0E03432g predicted mRNA Length = 1185 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gagctcctcggcaagctcaa 75 |||||||||||||||||||| Sbjct: 73 gagctcctcggcaagctcaa 92
>gb|AC093567.13| Homo sapiens chromosome 18, clone RP11-484L8, complete sequence Length = 174698 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 gacccatgcccaactctccccacc 483 ||||||| |||||||||||||||| Sbjct: 33697 gacccatccccaactctccccacc 33720
>emb|AL121955.20|HSDJ62D2 Human DNA sequence from clone RP1-62D2 on chromosome 6 Contains the 3' end of the gene for a novel protein similar to synaptonemal complex protein 2 (SYCP2), the ELOVL2 gene for elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (SSC2), a novel gene and a CpG island, complete sequence Length = 125585 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 gctttggcagagaacagtgg 618 |||||||||||||||||||| Sbjct: 6022 gctttggcagagaacagtgg 6041
>emb|AL035670.29|HS347E1 Human DNA sequence from clone RP3-347E1 on chromosome 6p11.2-21.1 Contains the 3' end of the CYP39A1 gene for cytochrome P450 subfamily XXXIX (oxysterol 7 alpha-hydroxylase) polypeptide 1 and a novel gene, complete sequence Length = 96618 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gaggagaatgtgagcacatt 96 |||||||||||||||||||| Sbjct: 71009 gaggagaatgtgagcacatt 70990
>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence Length = 180302 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 gccaatagctttggcagaga 611 |||||||||||||||||||| Sbjct: 159511 gccaatagctttggcagaga 159530
>dbj|AK084239.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230012H19 product:BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 2 (BREFELDIN A-INHIBITED GEP 2) homolog [Homo sapiens], full insert sequence Length = 5321 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gaggagaatgtgagcacatt 96 |||||||||||||||||||| Sbjct: 3779 gaggagaatgtgagcacatt 3798
>emb|AL111885.1|CNS019O5 Botrytis cinerea strain T4 cDNA library Length = 756 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 tgatttccttgcaagaagat 521 |||||||||||||||||||| Sbjct: 423 tgatttccttgcaagaagat 442
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tcacttgggaaggccatttg 438 |||||||||||||||||||| Sbjct: 61578 tcacttgggaaggccatttg 61597
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gagctcctcggcaagctcaa 75 |||||||||||||||||||| Sbjct: 373778 gagctcctcggcaagctcaa 373797
>emb|AL591911.8| Mouse DNA sequence from clone RP23-216D20 on chromosome 2, complete sequence Length = 120937 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gaggagaatgtgagcacatt 96 |||||||||||||||||||| Sbjct: 88088 gaggagaatgtgagcacatt 88107 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,128,596 Number of Sequences: 3902068 Number of extensions: 5128596 Number of successful extensions: 106213 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 105915 Number of HSP's gapped (non-prelim): 293 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)