ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags34c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 125 2e-25
3emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102... 125 2e-25
4gb|AY107573.1| Zea mays PCO077294 mRNA sequence 72 2e-09
5dbj|AK099694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
6gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence 46 0.12
7gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.47
8gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.47
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.47
11gb|AE002154.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 42 1.9
12gb|AC087886.11| Homo sapiens 12 BAC RP11-578A9 (Roswell Park Can... 42 1.9
13gb|AC016256.19| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Canc... 42 1.9
14emb|BX255895.6| Zebrafish DNA sequence from clone CH211-241M14 i... 42 1.9
15emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on ch... 40 7.4
16gb|AC169833.4| Rhesus Macaque BAC CH250-207J10 (Children's Hosp... 40 7.4
17emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 ... 40 7.4
18gb|DQ271456.1| Mustela vison clone IX1I13 microsatellite sequence 40 7.4
19gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, co... 40 7.4
20gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chrom... 40 7.4
21emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 40 7.4
22ref|XM_624020.1| PREDICTED: Apis mellifera similar to MGC68929 p... 40 7.4
23gb|AY552027.1| Dictyocaulus viviparus isolate L3ni16 paramyosin ... 40 7.4
24gb|AF194984.1|AF194984 Bos grunniens alpha s2 casein gene, promo... 40 7.4
25dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.4
26emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4... 40 7.4
27dbj|AP006395.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 7.4
28emb|AL772159.12| Mouse DNA sequence from clone RP23-107H15 on ch... 40 7.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                           
Query: 403     caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 462
               ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 5064675 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 5064734

                                              
Query: 463     atcatggggaagattgggtccccaatggata 493
               ||||||||||||||||||||| |||||||||
Sbjct: 5064735 atcatggggaagattgggtccgcaatggata 5064765



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 98      gcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaacttttgttgact 157
               ||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 5064057 gcagcctgtgatgaaacatcagaaaaatcggaacgggcatttgtccaacttttgttgact 5064116

                 
Query: 158     tc 159
               ||
Sbjct: 5064117 tc 5064118



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                           
Query: 326     actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 385
               |||||||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||
Sbjct: 5064489 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 5064548



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                          
Query: 2       atgcttcatccaaccggtcgtctaattgcatttgcaattcttcatcagagctattcctc 60
               ||||||||||| || |||||  | ||||||||||| |||||||| ||||| ||||||||
Sbjct: 5062264 atgcttcatcctactggtcggttgattgcatttgctattcttcaccagagttattcctc 5062322



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 195     agtcagctgtagattacgtaaatgagcctgtttctgcatcacagg 239
               ||||||||||||||||| |||||| | ||| ||||||||| ||||
Sbjct: 5064275 agtcagctgtagattacataaatgggtctgattctgcatctcagg 5064319
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                           
Query: 403     caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 462
               ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 5064657 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 5064716

                                              
Query: 463     atcatggggaagattgggtccccaatggata 493
               ||||||||||||||||||||| |||||||||
Sbjct: 5064717 atcatggggaagattgggtccgcaatggata 5064747



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 98      gcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaacttttgttgact 157
               ||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 5064039 gcagcctgtgatgaaacatcagaaaaatcggaacgggcatttgtccaacttttgttgact 5064098

                 
Query: 158     tc 159
               ||
Sbjct: 5064099 tc 5064100



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                           
Query: 326     actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 385
               |||||||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||
Sbjct: 5064471 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 5064530



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                          
Query: 2       atgcttcatccaaccggtcgtctaattgcatttgcaattcttcatcagagctattcctc 60
               ||||||||||| || |||||  | ||||||||||| |||||||| ||||| ||||||||
Sbjct: 5062246 atgcttcatcctactggtcggttgattgcatttgctattcttcaccagagttattcctc 5062304



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 195     agtcagctgtagattacgtaaatgagcctgtttctgcatcacagg 239
               ||||||||||||||||| |||||| | ||| ||||||||| ||||
Sbjct: 5064257 agtcagctgtagattacataaatgggtctgattctgcatctcagg 5064301
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>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112231

 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                         
Query: 403   caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 462
             ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 35328 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 35387

                                            
Query: 463   atcatggggaagattgggtccccaatggata 493
             ||||||||||||||||||||| |||||||||
Sbjct: 35388 atcatggggaagattgggtccgcaatggata 35418



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 98    gcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaacttttgttgact 157
             ||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 34710 gcagcctgtgatgaaacatcagaaaaatcggaacgggcatttgtccaacttttgttgact 34769

               
Query: 158   tc 159
             ||
Sbjct: 34770 tc 34771



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 326   actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 385
             |||||||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||
Sbjct: 35142 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 35201



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2     atgcttcatccaaccggtcgtctaattgcatttgcaattcttcatcagagctattcctc 60
             ||||||||||| || |||||  | ||||||||||| |||||||| ||||| ||||||||
Sbjct: 32917 atgcttcatcctactggtcggttgattgcatttgctattcttcaccagagttattcctc 32975



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 195   agtcagctgtagattacgtaaatgagcctgtttctgcatcacagg 239
             ||||||||||||||||| |||||| | ||| ||||||||| ||||
Sbjct: 34928 agtcagctgtagattacataaatgggtctgattctgcatctcagg 34972
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>gb|AY107573.1| Zea mays PCO077294 mRNA sequence
          Length = 1110

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 92/111 (82%), Gaps = 6/111 (5%)
 Strand = Plus / Plus

                                                                       
Query: 329 gttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcaga---- 384
           |||||| |||||||||| ||||||||  | | |||||||||||| |||||||||||    
Sbjct: 119 gttagaagtgctataccagatccagacgtccgtcaaagttgtgcaaattcatcagagtct 178

                                                              
Query: 385 --gatatcagcgcctgaaagcaaacaaaaatctgcttccgatgatagagat 433
             ||||||| | |||| ||||||||| |||||||| || ||||||||||||
Sbjct: 179 tcgatatcaccacctggaagcaaacagaaatctgcgtctgatgatagagat 229
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>dbj|AK099694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074F01, full
           insert sequence
          Length = 1577

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 309 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaagtt 368
           |||||||||||   |||||||||||| ||| ||| || |||||||||||  ||||||| |
Sbjct: 583 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaagct 642

                                  
Query: 369 gtgccaattcatcagagatatca 391
           |  |  |||||||||||||||||
Sbjct: 643 gcactgattcatcagagatatca 665



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 27  ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 86
           |||||||  |||||||||||||  | ||||||||||||   | |||||||| ||||||||
Sbjct: 301 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 360

                                                        
Query: 87  tgctgttaaatgcagcttgtgatgaatcatcagataaatcagaac 131
           |  |  || |||| |||||||||||| | || |||||| ||||||
Sbjct: 361 taataatacatgctgcttgtgatgaaacctctgataaaccagaac 405
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>gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence
          Length = 1802

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 101/127 (79%)
 Strand = Plus / Plus

                                                                       
Query: 27  ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 86
           |||||||||||||||| |||||  | ||||||||||||   | |||||| | | ||||||
Sbjct: 261 ttgcatttgcaattctacatcaaggttattcctcacagttggcaaatccatttcttcctc 320

                                                                       
Query: 87  tgctgttaaatgcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaac 146
           |  |  ||||||| || ||||||||| | || ||  || |||||| ||||||| ||||||
Sbjct: 321 ttttaataaatgctgcatgtgatgaaacttctgaggaagcagaacaagcatttctccaac 380

                  
Query: 147 ttttgtt 153
           || ||||
Sbjct: 381 ttctgtt 387
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>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0122P24, complete sequence
          Length = 136104

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 309   gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 366
             |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 35390 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 35333



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 27    ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 86
             |||||||  |||||||||||||  | ||||||||||||   | |||||||| ||||||||
Sbjct: 38199 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 38140

              
Query: 87    t 87
             |
Sbjct: 38139 t 38139
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>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0042K08, from chromosome 2, complete sequence
          Length = 164628

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 309  gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 366
            |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 4070 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 4013



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                        
Query: 27   ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 86
            |||||||  |||||||||||||  | ||||||||||||   | |||||||| ||||||||
Sbjct: 6879 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 6820

             
Query: 87   t 87
            |
Sbjct: 6819 t 6819
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 309     gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 366
               |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 7435408 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 7435465



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                           
Query: 27      ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 86
               |||||||  |||||||||||||  | ||||||||||||   | |||||||| ||||||||
Sbjct: 7432599 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 7432658

                
Query: 87      t 87
               |
Sbjct: 7432659 t 7432659
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 309     gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 366
               |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 7505494 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 7505551



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                           
Query: 27      ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 86
               |||||||  |||||||||||||  | ||||||||||||   | |||||||| ||||||||
Sbjct: 7502685 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 7502744

                
Query: 87      t 87
               |
Sbjct: 7502745 t 7502745
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>gb|AE002154.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 55 of 59 of
           the complete genome
          Length = 19497

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  taattgcatttgcaattcttc 44
           |||||||||||||||||||||
Sbjct: 117 taattgcatttgcaattcttc 137
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>gb|AC087886.11| Homo sapiens 12 BAC RP11-578A9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191923

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 23     ctaattgcatttgcaattctt 43
              |||||||||||||||||||||
Sbjct: 188827 ctaattgcatttgcaattctt 188847
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>gb|AC016256.19| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 164405

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 23   ctaattgcatttgcaattctt 43
            |||||||||||||||||||||
Sbjct: 2070 ctaattgcatttgcaattctt 2090
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>emb|BX255895.6| Zebrafish DNA sequence from clone CH211-241M14 in linkage group 6,
              complete sequence
          Length = 159627

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 100    agcttgtgatgaatcatcagataaa 124
              |||||||||||||||||||| ||||
Sbjct: 129740 agcttgtgatgaatcatcagctaaa 129716
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>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the
              Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic
              acid oxidase, a novel gene (LOC327969), the 5' end of the
              Sez6 gene for seizure related gene 6 and two CpG islands,
              complete sequence
          Length = 220176

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 429    gagattctgctcttgttgct 448
              ||||||||||||||||||||
Sbjct: 117571 gagattctgctcttgttgct 117590
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>gb|AC169833.4| Rhesus Macaque  BAC CH250-207J10 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 187311

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    gatatacctcaaagttgtgc 372
              ||||||||||||||||||||
Sbjct: 112432 gatatacctcaaagttgtgc 112413
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>emb|BX957346.14| Zebrafish DNA sequence from clone CH211-117K16 in linkage group 25,
             complete sequence
          Length = 149598

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    taattgcatttgcaattctt 43
             ||||||||||||||||||||
Sbjct: 31723 taattgcatttgcaattctt 31704
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>gb|DQ271456.1| Mustela vison clone IX1I13 microsatellite sequence
          Length = 730

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 81  ttcctctgctgttaaatgcagctt 104
           ||||||||||||||| ||||||||
Sbjct: 321 ttcctctgctgttaagtgcagctt 298
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>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence
          Length = 177819

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    attctgctcttgttgcttta 451
              ||||||||||||||||||||
Sbjct: 125236 attctgctcttgttgcttta 125255
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>gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chromosome unknown, complete
              sequence
          Length = 182992

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    gatatacctcaaagttgtgc 372
              ||||||||||||||||||||
Sbjct: 171348 gatatacctcaaagttgtgc 171329
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>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
              complete sequence
          Length = 173690

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     cacagccagtaaatccctat 79
              ||||||||||||||||||||
Sbjct: 155953 cacagccagtaaatccctat 155972
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>ref|XM_624020.1| PREDICTED: Apis mellifera similar to MGC68929 protein (LOC551629),
            partial mRNA
          Length = 3832

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atttgcaattcttcatcaga 50
            ||||||||||||||||||||
Sbjct: 2904 atttgcaattcttcatcaga 2885
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>gb|AY552027.1| Dictyocaulus viviparus isolate L3ni16 paramyosin mRNA, complete cds
          Length = 3215

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 253  ggaacagcttgagaagcaat 272
            ||||||||||||||||||||
Sbjct: 1214 ggaacagcttgagaagcaat 1233
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>gb|AF194984.1|AF194984 Bos grunniens alpha s2 casein gene, promoter region and exon 1
          Length = 990

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 366 gttgtgccaattcatcagagatat 389
           ||||||||||| ||||||||||||
Sbjct: 888 gttgtgccaatccatcagagatat 911
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>dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-217L21, complete
              sequence
          Length = 193828

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    gatatacctcaaagttgtgc 372
              ||||||||||||||||||||
Sbjct: 173502 gatatacctcaaagttgtgc 173483
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>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE
          Length = 136545

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 99    cagcttgtgatgaatcatcagataaatc 126
             |||||||||||  |||||||||||||||
Sbjct: 43953 cagcttgtgatccatcatcagataaatc 43926
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>dbj|AP006395.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT26P21, TM0279a,
             complete sequence
          Length = 61586

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cctgaaagcaaacaaaaatc 414
             ||||||||||||||||||||
Sbjct: 12471 cctgaaagcaaacaaaaatc 12490
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>emb|AL772159.12| Mouse DNA sequence from clone RP23-107H15 on chromosome 2, complete
              sequence
          Length = 188816

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    tttctgcatcacaggcccta 244
              ||||||||||||||||||||
Sbjct: 170522 tttctgcatcacaggcccta 170541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,658,525
Number of Sequences: 3902068
Number of extensions: 4658525
Number of successful extensions: 93893
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93747
Number of HSP's gapped (non-prelim): 144
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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