>OTC_HUMAN (P00480) Ornithine carbamoyltransferase, mitochondrial precursor|
           (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase)
          Length = 354

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +2

Query: 83  GQNQMHHNFR---PLQREKLSKGKDGFVAADFATTEIRGAVPLNPILWFHQAEERMYLCV 253
           G N M  NFR   PLQ +   KG+D     +F   EI+  + L+  L F   ++  YL +
Sbjct: 17  GHNFMVRNFRCGQPLQNKVQLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPL 76

Query: 254 YQHKNLTIL 280
            Q K+L ++
Sbjct: 77  LQGKSLGMI 85

>SYY_AYWBP (Q2NJG7) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 413

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +2

Query: 221 HQAEERMYLCVYQHKNLTILLVIPASSLINGEEGIAHVKRHLLENASQNIVSVEQKLSRG 400
           H  +  M L + +  +L ++LV  A+ LI   +     K   LEN+ QN  S+E +L   
Sbjct: 48  HLIQITMILLMQRQGHLPVILVGGATGLIGDPKETEERKLLSLENSLQNAKSIESQLKTI 107

Query: 401 WGGENAYHVGGYRYI 445
              +    V  Y+++
Sbjct: 108 LLNKQVEFVNNYQWL 122

>SYY_ONYPE (Q6YQA6) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 413

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +2

Query: 221 HQAEERMYLCVYQHKNLTILLVIPASSLINGEEGIAHVKRHLLENASQNIVSVEQKLSRG 400
           H  +  M L + +  +L ++LV  A+ LI   +     K   LEN+ QN  S+E +L   
Sbjct: 48  HLVQITMILLMQRQGHLPVILVGGATGLIGDPKETEERKLLSLENSLQNAKSIECQLKNI 107

Query: 401 WGGENAYHVGGYRYI 445
              +    V  Y+++
Sbjct: 108 LLNKQVEFVNNYQWL 122

>PO210_HUMAN (Q8TEM1) Nuclear pore membrane glycoprotein 210 precursor (POM210)|
            (Nuclear pore protein gp210)
          Length = 1887

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
 Frame = +2

Query: 101  HNFRPLQREKLSKGKDGFV------AADFATTEIRGAVPLNPILWFHQAEERMYLCVYQH 262
            H     QR+ LS  K   V      ++ F+T ++   VP +P L+  QAE    + +  H
Sbjct: 1648 HRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAE----ILLSNH 1703

Query: 263  KNLTILLVIPASSLINGEEGIAHVKRHLLENASQNIVSVEQKLSRGWGGENAYHVG 430
               + + V  A  ++   E         +++ S  +++  ++ S GW     Y VG
Sbjct: 1704 YTSSEIRVFGAPEVLENLE---------VKSGSPAVLAFAKEKSFGWPSFITYTVG 1750


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,134,093
Number of Sequences: 219361
Number of extensions: 1620889
Number of successful extensions: 4377
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4377
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)