ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags34c15 |
|---|---|
| Clone Library Name | barley_pub |
>SEC22_ARATH (Q94AU2) 25.3 kDa vesicle transport protein (AtSEC22)| Length = 218 Score = 302 bits (774), Expect = 5e-82 Identities = 148/165 (89%), Positives = 155/165 (93%) Frame = +1 Query: 172 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 MVK+T+IARVTDGLPLAEGLDDGRD DSD YKQQ K LFKNLS+GQ++ASRMS+ETG Y Sbjct: 1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPY 60 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 531 FHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNG IETAARPYAFIKFDT+I Sbjct: 61 VFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFI 120 Query: 532 QKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 QKTKKLY DTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD Sbjct: 121 QKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 165
>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle| trafficking protein-like 1) Length = 214 Score = 173 bits (438), Expect = 5e-43 Identities = 85/164 (51%), Positives = 119/164 (72%), Gaps = 1/164 (0%) Frame = +1 Query: 175 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 V LTMIARV DGLPLA + +D + +D Y+ QAK LF+ L+ + +R ++E G+ Sbjct: 1 VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 531 FHYIIE VCYL +C+ ++PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDT+I Sbjct: 59 TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118 Query: 532 QKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKL 663 QKTKKLY+D+R +RN+ +N EL +V +IM N++EVL GE L Sbjct: 119 QKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEAL 162
>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle| trafficking protein-like 1) Length = 214 Score = 173 bits (438), Expect = 5e-43 Identities = 85/164 (51%), Positives = 119/164 (72%), Gaps = 1/164 (0%) Frame = +1 Query: 175 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 V LTMIARV DGLPLA + +D + +D Y+ QAK LF+ L+ + +R ++E G+ Sbjct: 1 VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 531 FHYIIE VCYL +C+ ++PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDT+I Sbjct: 59 TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118 Query: 532 QKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKL 663 QKTKKLY+D+R +RN+ +N EL +V +IM N++EVL GE L Sbjct: 119 QKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEAL 162
>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle| trafficking protein-like 1) Length = 214 Score = 173 bits (438), Expect = 5e-43 Identities = 85/164 (51%), Positives = 119/164 (72%), Gaps = 1/164 (0%) Frame = +1 Query: 175 VKLTMIARVTDGLPLAEGL-DDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 V LTMIARV DGLPLA + +D + +D Y+ QAK LF+ L+ + +R ++E G+ Sbjct: 1 VLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAM 58 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTYI 531 FHYIIE VCYL +C+ ++PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDT+I Sbjct: 59 TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFI 118 Query: 532 QKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKL 663 QKTKKLY+D+R +RN+ +N EL +V +IM N++EVL GE L Sbjct: 119 QKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEAL 162
>SEC22_YARLI (Q6C880) Protein transport protein SEC22| Length = 213 Score = 145 bits (367), Expect = 8e-35 Identities = 71/166 (42%), Positives = 113/166 (68%), Gaps = 1/166 (0%) Frame = +1 Query: 172 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 MV T+I R +DGLPL+ +DDG++ K+Q KL+ + LS + A R SIE+G+Y Sbjct: 1 MVLSTLIMRASDGLPLSASVDDGQENLSEQ--KKQCKLVTQKLSA--NSADRASIESGNY 56 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTY 528 HY+++ + Y + + SYP+KLAF YL++L EF++ +G + ++ RPY F++FDT+ Sbjct: 57 VIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTF 116 Query: 529 IQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +QKTK++Y DTR N+ KLN EL +V ++MT+N++++L G LD Sbjct: 117 MQKTKRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDLLHRGHSLD 162
>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22| Length = 209 Score = 142 bits (359), Expect = 7e-34 Identities = 68/153 (44%), Positives = 107/153 (69%), Gaps = 1/153 (0%) Frame = +1 Query: 211 LPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSYFFHYIIEGRVCYL 390 LPLA +DD +++ + +K+QAKL+ K LS + R SIE+G Y FHY+I+ +CYL Sbjct: 7 LPLAASVDDESTERNLESHKKQAKLILKRLSPTSEK--RASIESGDYTFHYLIDNGICYL 64 Query: 391 TMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTYIQKTKKLYLDTRT 567 +C++SYP+KLAF YLE+L EF G + ++ RPYAF++FDT++QK+K++Y R Sbjct: 65 CICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVYNTPRA 124 Query: 568 QRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 N+ KLN EL +V ++MT+N++++L G+ L+ Sbjct: 125 NDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLE 157
>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22| Length = 214 Score = 131 bits (330), Expect = 2e-30 Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%) Frame = +1 Query: 172 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 M+K T+I R DGLPL +DD D +D K++ K+L + A+ ++E+G+Y Sbjct: 1 MIKSTLIFR-DDGLPLCSSVDDDTDPSLAD-QKKKVKVLISRFTP--QSANEATLESGAY 56 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQ-IETAARPYAFIKFDTY 528 HY+ + V Y+ + +R YP+ LAF YL ++++EFE G++ ++ + RPYAF+ FD + Sbjct: 57 EMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVKPSVRPYAFVSFDNF 116 Query: 529 IQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +QKTKK+Y D R Q N+ +LN +L V QIMT+N++++L G+ LD Sbjct: 117 LQKTKKIYNDKRVQGNLDQLNSDLLGVKQIMTKNIEDLLYRGDSLD 162
>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22| Length = 214 Score = 125 bits (313), Expect = 1e-28 Identities = 66/166 (39%), Positives = 102/166 (61%), Gaps = 1/166 (0%) Frame = +1 Query: 172 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 M++ T+I R DGLPL +DD D + K++ K+L + A+ ++E+G + Sbjct: 1 MIRSTLIFR-EDGLPLCASVDDDTDPSLQE-QKKKVKILISRFTPTS--ANEATVESGDF 56 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETA-ARPYAFIKFDTY 528 HYI V Y+ + +R+YP+ LAF YL D++ EFE G Q+ + RPY F+ FD + Sbjct: 57 EIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNF 116 Query: 529 IQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +QKTKK+Y D R Q N+ +LN +L V QIMT+N++++L G+ LD Sbjct: 117 LQKTKKVYNDKRVQGNMDQLNQDLKGVKQIMTKNIEDLLYRGDSLD 162
>SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)| Length = 214 Score = 118 bits (296), Expect = 1e-26 Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 1/166 (0%) Frame = +1 Query: 172 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 M+K T+I R DGLPL +D+ D + KQ+ K++ L+ A+ ++E+GS+ Sbjct: 1 MIKSTLIYR-EDGLPLCTSVDNENDPSLFE-QKQKVKIVVSRLTP--QSATEATLESGSF 56 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 528 HY+ + V Y +C+ YP+ LAF YL D+ EFE ++ + RPY F+ FD + Sbjct: 57 EIHYLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNF 116 Query: 529 IQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +Q TKK Y D + Q N+ +LN EL V QIM++N++++L G+ LD Sbjct: 117 LQMTKKSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLD 162
>SEC22_CANGA (Q6FWT0) Protein transport protein SEC22| Length = 215 Score = 113 bits (282), Expect = 6e-25 Identities = 59/166 (35%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Frame = +1 Query: 172 MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSKGQHEASRMSIETGSY 351 M+K T++ R DGLPL +DD + K++ K++ ++ A+ ++E+ Sbjct: 1 MIKSTVVYR-DDGLPLCSSVDDDISDLSLNEQKKRIKMVVSRMTP--QSANEATLESKDS 57 Query: 352 FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQI-ETAARPYAFIKFDTY 528 HYI + V Y +C+ YP+ LAF YL D+ EF+ +++ + RPYAF FDT+ Sbjct: 58 EIHYIRQQGVIYFVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTF 117 Query: 529 IQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +Q+TKK Y D + Q N+ +LN EL V QIM++N++++L G+ L+ Sbjct: 118 LQRTKKAYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLE 163
>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)| (Ti-VAMP) (Ti-VAMP/VAMP7) Length = 219 Score = 65.9 bits (159), Expect = 1e-10 Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 1/124 (0%) Frame = +1 Query: 298 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGS 477 L+K E ++++ G+Y FHYI + R+ YL + D + + AF +L ++K F+ GS Sbjct: 32 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS 91 Query: 478 QIETAARPYAF-IKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVG 654 + +TA PYA +F + + K + + + + + ++ E+ IM RN+ V G Sbjct: 92 RAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRG 150 Query: 655 EKLD 666 E+L+ Sbjct: 151 ERLE 154
>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1| Length = 219 Score = 65.5 bits (158), Expect = 1e-10 Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 1/124 (0%) Frame = +1 Query: 298 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGS 477 L+K E ++++ G+Y FHYI + R+ YL + D + + AF +L ++K F+ GS Sbjct: 32 LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS 91 Query: 478 QIETAARPYAF-IKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVG 654 + +TA PYA +F + + K + + + + + ++ E+ IM RN+ V G Sbjct: 92 RAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRG 150 Query: 655 EKLD 666 E+L+ Sbjct: 151 ERLE 154
>YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6| Length = 197 Score = 59.3 bits (142), Expect = 1e-08 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 2/127 (1%) Frame = +1 Query: 292 KNLSKGQHEASRMSIETGSYFFH-YIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERV 468 K +++ + R +E +Y FH Y +C + D+ YP ++A+ L + +EF Sbjct: 45 KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTK 104 Query: 469 N-GSQIETAARPYAFIKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVL 645 N ++ E+ A +F + DTY+ K Y D + I ++ EL E ++ + ++ VL Sbjct: 105 NPRTKWESGAVTLSFPELDTYLSK----YQDPKQADTIMRVQQELDETKDVLHKTIESVL 160 Query: 646 GVGEKLD 666 GEKLD Sbjct: 161 ARGEKLD 167
>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)| Length = 221 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/120 (23%), Positives = 53/120 (44%) Frame = +1 Query: 307 GQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIE 486 G S MS Y FH + L M D + + + F +L+D+ F + G I Sbjct: 38 GNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIH 97 Query: 487 TAARPYAFIKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +A +F + + + Y + ++++ E+ +V +M N+ +VL GE+L+ Sbjct: 98 SAQAYSMNDEFSRVLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLE 157
>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)| Length = 219 Score = 50.8 bits (120), Expect = 4e-06 Identities = 28/115 (24%), Positives = 51/115 (44%) Frame = +1 Query: 322 SRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARP 501 S +S Y FH + L M D +++ F +LED+ F R G I +A Sbjct: 42 SHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAY 101 Query: 502 YAFIKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +F + + + Y + I+++ E+ +V +M N+ +L GE+L+ Sbjct: 102 AMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLE 156
>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)| (v-SNARE synaptobrevin 7C) (AtVAMP7C) Length = 219 Score = 48.5 bits (114), Expect = 2e-05 Identities = 28/115 (24%), Positives = 51/115 (44%) Frame = +1 Query: 322 SRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARP 501 S +S Y FH + L M + + +++ F +LED+ F R G + TA Sbjct: 42 SNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAY 101 Query: 502 YAFIKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +F + + Y + I ++ E+ +V +M N+ +VL GE+L+ Sbjct: 102 AMNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLE 156
>VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (AtVAMP721)| (v-SNARE synaptobrevin 7B) (AtVAMP7B) Length = 219 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Frame = +1 Query: 256 SDFYKQQAKLLFKNLSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQY 435 +DF + + L K ++ + + F+Y++E Y + S +++ + Sbjct: 22 TDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSF 81 Query: 436 LEDLKNEF-ERVNGSQIETAARPYAFIKFDTYIQKTKKLYLDTRTQ-RNIAKLNDELYEV 609 LE +K +F +R G + TA +F + +++ + +D + +AK+ ++ EV Sbjct: 82 LERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEV 141 Query: 610 HQIMTRNVQEVLGVGEKLD 666 +M N+++VL GEK++ Sbjct: 142 KGVMMENIEKVLDRGEKIE 160
>VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (AtVAMP722)| (Synaptobrevin-related protein 1) Length = 221 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Frame = +1 Query: 256 SDFYKQQAKLLFKNLSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQY 435 +DF + + L K ++ + + F+Y++E Y + S +++ + Sbjct: 22 TDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAF 81 Query: 436 LEDLKNEF-ERVNGSQIETAARPYAFIKFDTYIQKTKKLYLDTRTQ-RNIAKLNDELYEV 609 LE +K +F +R G + TA +F + +++ + +D + +AK+ ++ EV Sbjct: 82 LERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEV 141 Query: 610 HQIMTRNVQEVLGVGEKLD 666 +M N+++VL GEK++ Sbjct: 142 KGVMMENIEKVLDRGEKIE 160
>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)| Length = 221 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/114 (16%), Positives = 53/114 (46%) Frame = +1 Query: 325 RMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPY 504 R+ Y FH + + +L M + ++ +++ F YLE++ F + G A Sbjct: 44 RLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYA 103 Query: 505 AFIKFDTYIQKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 666 +F + + + + + + ++ E+ E+ +M N+++++ G++++ Sbjct: 104 MNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIE 157
>VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (AtVAMP725)| Length = 285 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/125 (22%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Frame = +1 Query: 298 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEF-ERVNG 474 L K ++ + + F+Y++E Y + S +++ +LE +K +F +R G Sbjct: 101 LQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGG 160 Query: 475 SQIETAARPYAFIKFDTYIQKTKKLYLDTRTQ-RNIAKLNDELYEVHQIMTRNVQEVLGV 651 + TA +F + +++ + +D + +AK+ ++ EV +M N+++VL Sbjct: 161 GKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDR 220 Query: 652 GEKLD 666 GEK++ Sbjct: 221 GEKIE 225
>VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein 726| (AtVAMP726) Length = 220 Score = 39.3 bits (90), Expect = 0.011 Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Frame = +1 Query: 298 LSKGQHEASRMSIETGSYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEF-ERVNG 474 L K ++ + + F+Y+ + Y + S +++ +LE +K +F +R G Sbjct: 36 LQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGG 95 Query: 475 SQIETAARPYAFIKFDTYIQKTKKLYLDTRTQ-RNIAKLNDELYEVHQIMTRNVQEVLGV 651 + TA +F + +++ + D + ++K+ ++ EV +M N+++VL Sbjct: 96 GKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDR 155 Query: 652 GEKLD 666 GEK++ Sbjct: 156 GEKIE 160
>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 893 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -2 Query: 133 LMANRDGGRRARRLETPRPSSGKQIAGGREESG 35 LM GGRR+RR TP P + +Q G+ E+G Sbjct: 380 LMVRSQGGRRSRRARTPMPGAEQQ--EGQPETG 410 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,384,867 Number of Sequences: 219361 Number of extensions: 1692509 Number of successful extensions: 4818 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4801 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
