ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags34b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome... 48 0.033
2emb|AL591034.5| Human DNA sequence from clone RP11-96J19 on chro... 46 0.13
3emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 i... 44 0.51
4gb|AY240955.1| Plasmodium falciparum DNA mismatch repair enzyme ... 44 0.51
5emb|BX470224.5| Zebrafish DNA sequence from clone DKEY-13N15 in ... 44 0.51
6gb|AC097715.3| Homo sapiens BAC clone RP11-563A13 from 2, comple... 44 0.51
7emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in ... 42 2.0
8gb|AC099591.7| Mus musculus chromosome 19, clone RP23-401D18, co... 42 2.0
9ref|XM_645187.1| Entamoeba histolytica HM-1:IMSS zinc finger pro... 42 2.0
10emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on ch... 42 2.0
11gb|AC093012.9| Homo sapiens 12 BAC RP11-210N13 (Roswell Park Can... 42 2.0
12gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Can... 42 2.0
13gb|AC116154.2| Homo sapiens chromosome 8, clone RP11-927P11, com... 42 2.0
14gb|AC099569.2| Homo sapiens chromosome 1 clone RP5-1007M22, comp... 42 2.0
15gb|AC117503.8| Homo sapiens 12 BAC RP11-338K17 (Roswell Park Can... 42 2.0
16emb|BX571822.6| Zebrafish DNA sequence from clone DKEY-5M24 in l... 42 2.0
17gb|AY186092.1| Homo sapiens interleukin-1 receptor-associated ki... 42 2.0
18emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 ... 42 2.0
19gb|AC105159.15| Mus musculus chromosome 18, clone RP24-503L15, c... 42 2.0
20dbj|AP004389.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.0
21gb|AY510454.1| Aspergillus nomius isolate AN13137 aflatoxin bios... 40 7.9
22gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 7.9
23gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, com... 40 7.9
24gb|AY621075.1| Rattus norvegicus Fanconi anemia D2 protein (Fanc... 40 7.9
25emb|CR388227.9| Zebrafish DNA sequence from clone DKEY-102E1 in ... 40 7.9
26gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome... 40 7.9
27gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosom... 40 7.9
28emb|AL032653.1|CEY54E5B Caenorhabditis elegans YAC Y54E5B, compl... 40 7.9
29gb|AC115123.4| Mus musculus BAC clone RP24-129O20 from 3, comple... 40 7.9
30ref|XM_720922.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 7.9
31gb|AC079763.7| Homo sapiens BAC clone RP11-153N17 from 7, comple... 40 7.9
32gb|AC105950.11| Mus musculus chromosome 12, clone RP24-386J17, c... 40 7.9
33emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in ... 40 7.9
34emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chrom... 40 7.9
35gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 40 7.9
36emb|AL359203.22| Human DNA sequence from clone RP11-547P4 on chr... 40 7.9
37emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on ch... 40 7.9
38emb|AL139803.12| Human DNA sequence from clone RP11-77P3 on chro... 40 7.9
39emb|AL050402.16|HSBA46E17 Human DNA sequence from clone RP11-46E... 40 7.9
40emb|AL035702.7|HS593C16 Human DNA sequence from clone RP4-593C16... 40 7.9
41ref|NM_001001719.1| Rattus norvegicus Fanconi anemia D2 protein ... 40 7.9
42emb|BX927159.10| Zebrafish DNA sequence from clone DKEY-17C23 in... 40 7.9
43emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in ... 40 7.9
44gb|AC146675.3| Callithrix jacchus clone CH259-444F21, complete s... 40 7.9
45gb|AC112219.2| Homo sapiens chromosome 3 clone RP11-433A10, comp... 40 7.9
46gb|AC012609.7| Homo sapiens chromosome 5 clone CTC-531M23, compl... 40 7.9
47dbj|AB075482.1| Homo sapiens neuroblastoma cDNA, clone:Nbla00104... 40 7.9
48gb|AC089984.23| Homo sapiens 12q BAC RP11-2H8 (Roswell Park Canc... 40 7.9
49gb|AF259841.1| Ambrosiodmus aegir 12S ribosomal RNA gene, partia... 40 7.9
50gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, com... 40 7.9
51gb|AC026406.5| Homo sapiens chromosome 5 clone CTC-365E16, compl... 40 7.9
52gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromoso... 40 7.9
53gb|AC104832.8| Mus Musculus Strain C57BL6/J Chromosome 12 BAC, R... 40 7.9
54gb|AC015912.16| Homo sapiens chromosome 17, clone RP11-670E13, c... 40 7.9
55gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, c... 40 7.9
56ref|XM_579063.1| PREDICTED: Rattus norvegicus Fanconi anemia D2 ... 40 7.9
57gb|AC134661.4| Homo sapiens chromosome 15, clone CTD-3098H5, com... 40 7.9
58gb|AC022308.17|AC022308 Homo sapiens chromosome 15 clone RP11-34... 40 7.9
59dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21,... 40 7.9
60emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chr... 40 7.9
61emb|BX950195.14| Zebrafish DNA sequence from clone CH211-232M10 ... 40 7.9
62emb|BX957258.12| Zebrafish DNA sequence from clone DKEY-285J17 i... 40 7.9
63gb|AC007204.1|AC007204 Homo sapiens chromosome 19, BAC 273239 (C... 40 7.9
64dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.9
65gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, com... 40 7.9
66dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 7.9
67emb|BX470094.10| Mouse DNA sequence from clone RP23-130F16 on ch... 40 7.9
68emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, com... 40 7.9
69gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, c... 40 7.9
70emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 ... 40 7.9 
>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence
          Length = 194243

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 540   tcattgattattttagtattcctgattt 567
             |||||||||||||||| |||||||||||
Sbjct: 68048 tcattgattattttaggattcctgattt 68021
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>emb|AL591034.5| Human DNA sequence from clone RP11-96J19 on chromosome 6 Contains a 60S
             ribosomal protein L31 (RPL31) pseudogene, a replication
             protein A3 (RPA3) pseudogene and the gene for a novel
             protein, complete sequence
          Length = 94727

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 470   atttgtttaacctggtattcatttgag 496
             |||||||||||||||| ||||||||||
Sbjct: 44399 atttgtttaacctggtcttcatttgag 44425
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>emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 in linkage group 1,
             complete sequence
          Length = 103132

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 487   ttcatttgagtgcagcaacagtggca 512
             ||||| ||||||||||||||||||||
Sbjct: 22915 ttcatgtgagtgcagcaacagtggca 22890
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>gb|AY240955.1| Plasmodium falciparum DNA mismatch repair enzyme (MutS2) gene,
            complete cds
          Length = 2622

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  atttttggaaagctttatgaat 316
            ||||||||||||||||||||||
Sbjct: 2410 atttttggaaagctttatgaat 2389
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>emb|BX470224.5| Zebrafish DNA sequence from clone DKEY-13N15 in linkage group 5, complete
              sequence
          Length = 244492

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 308    tttatgaatgtgtatgttatat 329
              ||||||||||||||||||||||
Sbjct: 212235 tttatgaatgtgtatgttatat 212256
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>gb|AC097715.3| Homo sapiens BAC clone RP11-563A13 from 2, complete sequence
          Length = 143642

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 310    tatgaatgtgtatgttatatat 331
              ||||||||||||||||||||||
Sbjct: 129264 tatgaatgtgtatgttatatat 129285
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>emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in linkage group 9, complete
              sequence
          Length = 155321

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    tatagaaataatagttttcag 377
              |||||||||||||||||||||
Sbjct: 113483 tatagaaataatagttttcag 113463
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>gb|AC099591.7| Mus musculus chromosome 19, clone RP23-401D18, complete sequence
          Length = 191578

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 63     gcagagatgggaagggatgag 83
              |||||||||||||||||||||
Sbjct: 130322 gcagagatgggaagggatgag 130342
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>ref|XM_645187.1| Entamoeba histolytica HM-1:IMSS zinc finger protein (231.t00009)
           partial mRNA
          Length = 930

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 272 gaatgaaatatttatgatttt 292
           |||||||||||||||||||||
Sbjct: 511 gaatgaaatatttatgatttt 491
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>emb|AL357873.17| Human DNA sequence from clone RP11-344F13 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 143508

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 429    tgcttctgatgcatttttctt 449
              |||||||||||||||||||||
Sbjct: 119403 tgcttctgatgcatttttctt 119383
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>gb|AC093012.9| Homo sapiens 12 BAC RP11-210N13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 118572

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   aaatatttatgattttgaatt 297
             |||||||||||||||||||||
Sbjct: 39772 aaatatttatgattttgaatt 39752
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>gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 130027

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gagatgggaagggatgagcaa 86
              |||||||||||||||||||||
Sbjct: 122917 gagatgggaagggatgagcaa 122897
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>gb|AC116154.2| Homo sapiens chromosome 8, clone RP11-927P11, complete sequence
          Length = 196518

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   tgatgcatttttcttcaaact 455
             |||||||||||||||||||||
Sbjct: 83463 tgatgcatttttcttcaaact 83443
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>gb|AC099569.2| Homo sapiens chromosome 1 clone RP5-1007M22, complete sequence
          Length = 126833

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   tatttatgattttgaattttt 300
             |||||||||||||||||||||
Sbjct: 57437 tatttatgattttgaattttt 57457
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>gb|AC117503.8| Homo sapiens 12 BAC RP11-338K17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 218476

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    gagagcagagatgggaaggga 79
             |||||||||||||||||||||
Sbjct: 92873 gagagcagagatgggaaggga 92853
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>emb|BX571822.6| Zebrafish DNA sequence from clone DKEY-5M24 in linkage group 25,
             complete sequence
          Length = 163788

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   tgagcagtgaacatactgtac 353
             |||||||||||||||||||||
Sbjct: 95912 tgagcagtgaacatactgtac 95932
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>gb|AY186092.1| Homo sapiens interleukin-1 receptor-associated kinase 4 (IRAK4) gene,
             complete cds
          Length = 33033

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   aaatatttatgattttgaatt 297
             |||||||||||||||||||||
Sbjct: 15758 aaatatttatgattttgaatt 15738
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>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12,
             complete sequence
          Length = 161610

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   aatatttatgattttgaattt 298
             |||||||||||||||||||||
Sbjct: 65812 aatatttatgattttgaattt 65832
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>gb|AC105159.15| Mus musculus chromosome 18, clone RP24-503L15, complete sequence
          Length = 149806

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   atgtgtatgttatatatttga 335
             |||||||||||||||||||||
Sbjct: 38081 atgtgtatgttatatatttga 38061
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>dbj|AP004389.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1995B9
          Length = 161124

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   tgatgcatttttcttcaaact 455
             |||||||||||||||||||||
Sbjct: 20509 tgatgcatttttcttcaaact 20489
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>gb|AY510454.1| Aspergillus nomius isolate AN13137 aflatoxin biosynthesis gene
            cluster, complete sequence
          Length = 75352

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  aacaggttatggttgaggac 200
            ||||||||||||||||||||
Sbjct: 6856 aacaggttatggttgaggac 6875
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>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 540    tcattgattattttagtatt 559
              ||||||||||||||||||||
Sbjct: 432059 tcattgattattttagtatt 432078
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>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    gagcagagatgggaagggat 80
             ||||||||||||||||||||
Sbjct: 22810 gagcagagatgggaagggat 22791
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>gb|AY621075.1| Rattus norvegicus Fanconi anemia D2 protein (Fancd2) mRNA, complete
           cds
          Length = 4365

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 51  ttgaatgcgagagcagagatggga 74
           ||||| ||||||||||||||||||
Sbjct: 494 ttgaaagcgagagcagagatggga 517
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>emb|CR388227.9| Zebrafish DNA sequence from clone DKEY-102E1 in linkage group 12,
             complete sequence
          Length = 137630

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   tttatgattttgaatttttg 301
             ||||||||||||||||||||
Sbjct: 85983 tttatgattttgaatttttg 86002
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>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete
            sequence
          Length = 191814

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  cagagatagttaacaggtta 189
            ||||||||||||||||||||
Sbjct: 3866 cagagatagttaacaggtta 3885
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>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence
          Length = 212994

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    gattattttgttcataaatc 259
              ||||||||||||||||||||
Sbjct: 156226 gattattttgttcataaatc 156207
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>emb|AL032653.1|CEY54E5B Caenorhabditis elegans YAC Y54E5B, complete sequence
          Length = 21353

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  ttttgttcataaatctgttc 264
            ||||||||||||||||||||
Sbjct: 5788 ttttgttcataaatctgttc 5769
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>gb|AC115123.4| Mus musculus BAC clone RP24-129O20 from 3, complete sequence
          Length = 181380

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   aatgaaatatttatgattttgaat 296
             ||||||||||||| ||||||||||
Sbjct: 41794 aatgaaatatttaggattttgaat 41817
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>ref|XM_720922.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05545)
            partial mRNA
          Length = 7545

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  tggattattttgttcataaa 257
            ||||||||||||||||||||
Sbjct: 6045 tggattattttgttcataaa 6026
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>gb|AC079763.7| Homo sapiens BAC clone RP11-153N17 from 7, complete sequence
          Length = 157848

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    tatgatccatggattatttt 248
              ||||||||||||||||||||
Sbjct: 100876 tatgatccatggattatttt 100895
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>gb|AC105950.11| Mus musculus chromosome 12, clone RP24-386J17, complete sequence
          Length = 192207

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 310   tatgaatgtgtatgttatatattt 333
             ||||||||||||| ||||||||||
Sbjct: 78030 tatgaatgtgtatattatatattt 78007
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>emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in linkage group 23, complete
              sequence
          Length = 246041

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    attttgttcataaatctgtt 263
              ||||||||||||||||||||
Sbjct: 233162 attttgttcataaatctgtt 233181
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>emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chromosome 13 Contains a CpG
             island, complete sequence
          Length = 43138

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   tacttatatagaaataatag 370
             ||||||||||||||||||||
Sbjct: 20574 tacttatatagaaataatag 20593
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>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 277    aaatatttatgattttgaattttt 300
              ||||| ||||||||||||||||||
Sbjct: 215011 aaataattatgattttgaattttt 214988
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>emb|AL359203.22| Human DNA sequence from clone RP11-547P4 on chromosome 1 Contains a
             pseudogene similar to part of tyrosine
             3-monooxygenase/tryptophan 5-monooxygenase activation
             protein theta polypeptide  (YWHAQ), complete sequence
          Length = 121362

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tatgaatgtgtatgttatat 329
             ||||||||||||||||||||
Sbjct: 93561 tatgaatgtgtatgttatat 93542
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>emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on chromosome 9 Contains a
             novel gene, a ribosomal protein L35a (RPL35A) and a CpG
             island. pseudogene, complete sequence
          Length = 200970

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   acttatatagaaataatagt 371
             ||||||||||||||||||||
Sbjct: 91275 acttatatagaaataatagt 91256
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>emb|AL139803.12| Human DNA sequence from clone RP11-77P3 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 107708

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 275   tgaaatatttatgattttgaattt 298
             ||||||| ||||||||||||||||
Sbjct: 80257 tgaaataattatgattttgaattt 80234
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>emb|AL050402.16|HSBA46E17 Human DNA sequence from clone RP11-46E17 on chromosome 22, complete
             sequence
          Length = 109710

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ttattttgttcataaatctg 261
             ||||||||||||||||||||
Sbjct: 74934 ttattttgttcataaatctg 74953
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>emb|AL035702.7|HS593C16 Human DNA sequence from clone RP4-593C16 on chromosome 1q24.1-25.2
             Contains the 3' end of the RASAL2 gene for RAS protein
             activator like 2, the 3' end of a novel gene and a CpG
             island, complete sequence
          Length = 81971

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   tatgaatgtgtatgttatatattt 333
             ||||||||||||| ||||||||||
Sbjct: 38066 tatgaatgtgtatattatatattt 38089
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>ref|NM_001001719.1| Rattus norvegicus Fanconi anemia D2 protein (Fancd2), mRNA
          Length = 4365

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 51  ttgaatgcgagagcagagatggga 74
           ||||| ||||||||||||||||||
Sbjct: 494 ttgaaagcgagagcagagatggga 517
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>emb|BX927159.10| Zebrafish DNA sequence from clone DKEY-17C23 in linkage group 17,
             complete sequence
          Length = 169728

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   gaaataatagttttcagttt 380
             ||||||||||||||||||||
Sbjct: 93440 gaaataatagttttcagttt 93459
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>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23,
              complete sequence
          Length = 171486

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    tgattttgaatttttggaaa 305
              ||||||||||||||||||||
Sbjct: 155650 tgattttgaatttttggaaa 155631
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>gb|AC146675.3| Callithrix jacchus clone CH259-444F21, complete sequence
          Length = 188829

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 540    tcattgattattttagtatt 559
              ||||||||||||||||||||
Sbjct: 102454 tcattgattattttagtatt 102473
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>gb|AC112219.2| Homo sapiens chromosome 3 clone RP11-433A10, complete sequence
          Length = 155472

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   aaccaggggtggtgcagaaacaga 148
             |||||||||||| |||||||||||
Sbjct: 21566 aaccaggggtggggcagaaacaga 21589
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>gb|AC012609.7| Homo sapiens chromosome 5 clone CTC-531M23, complete sequence
          Length = 148433

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   atttatgattttgaattttt 300
             ||||||||||||||||||||
Sbjct: 21365 atttatgattttgaattttt 21384
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>dbj|AB075482.1| Homo sapiens neuroblastoma cDNA, clone:Nbla00104, full insert
            sequence
          Length = 2241

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  agttttcagttttctctgta 388
            ||||||||||||||||||||
Sbjct: 1719 agttttcagttttctctgta 1738
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>gb|AC089984.23| Homo sapiens 12q BAC RP11-2H8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147638

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   agttttcagttttctctgta 388
             ||||||||||||||||||||
Sbjct: 22732 agttttcagttttctctgta 22751
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>gb|AF259841.1| Ambrosiodmus aegir 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 339

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 aaatatttatgattttgaat 296
           ||||||||||||||||||||
Sbjct: 170 aaatatttatgattttgaat 151
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>gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, complete sequence
          Length = 239344

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     gagatgggaagggatgagca 85
              ||||||||||||||||||||
Sbjct: 175573 gagatgggaagggatgagca 175554
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>gb|AC026406.5| Homo sapiens chromosome 5 clone CTC-365E16, complete sequence
          Length = 122704

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   atttatgattttgaattttt 300
             ||||||||||||||||||||
Sbjct: 45857 atttatgattttgaattttt 45838
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>gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromosome 7, complete sequence
          Length = 164152

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    tatgatccatggattatttt 248
              ||||||||||||||||||||
Sbjct: 105941 tatgatccatggattatttt 105960
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>gb|AC104832.8| Mus Musculus Strain C57BL6/J Chromosome 12 BAC, RP23-38P6, complete
            sequence
          Length = 179216

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  tatgaatgtgtatgttatatattt 333
            ||||||||||||| ||||||||||
Sbjct: 9528 tatgaatgtgtatattatatattt 9505
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>gb|AC015912.16| Homo sapiens chromosome 17, clone RP11-670E13, complete sequence
          Length = 118172

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   tttcagttttctctgtaaca 391
             ||||||||||||||||||||
Sbjct: 29839 tttcagttttctctgtaaca 29858
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>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence
          Length = 162101

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 60     agagcagagatgggaagggatgag 83
              |||||||||||||||||| |||||
Sbjct: 152463 agagcagagatgggaaggaatgag 152440
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>ref|XM_579063.1| PREDICTED: Rattus norvegicus Fanconi anemia D2 protein (Fancd2),
           mRNA
          Length = 4365

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 51  ttgaatgcgagagcagagatggga 74
           ||||| ||||||||||||||||||
Sbjct: 494 ttgaaagcgagagcagagatggga 517
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>gb|AC134661.4| Homo sapiens chromosome 15, clone CTD-3098H5, complete sequence
          Length = 63244

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    agagcagagatgggaagggatgag 83
             |||||||||||||||||| |||||
Sbjct: 14360 agagcagagatgggaaggaatgag 14383
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>gb|AC022308.17|AC022308 Homo sapiens chromosome 15 clone RP11-34L4, complete sequence
          Length = 166226

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    agagcagagatgggaagggatgag 83
             |||||||||||||||||| |||||
Sbjct: 35351 agagcagagatgggaaggaatgag 35328
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>dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21, map 22, complete
              sequences
          Length = 163689

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    aataatagttttcagttttc 382
              ||||||||||||||||||||
Sbjct: 114282 aataatagttttcagttttc 114263
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>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete
             sequence
          Length = 194287

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   tattttgttcataaatctgt 262
             ||||||||||||||||||||
Sbjct: 36357 tattttgttcataaatctgt 36338
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>emb|BX950195.14| Zebrafish DNA sequence from clone CH211-232M10 in linkage group 19,
             complete sequence
          Length = 149624

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   aaatatttatgattttgaattttt 300
             |||||||||||||||| |||||||
Sbjct: 10862 aaatatttatgatttttaattttt 10839
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>emb|BX957258.12| Zebrafish DNA sequence from clone DKEY-285J17 in linkage group 22,
            complete sequence
          Length = 169327

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 340  tgaacatactgtacttatatagaa 363
            ||||||||||||| ||||||||||
Sbjct: 4839 tgaacatactgtatttatatagaa 4862



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 340  tgaacatactgtacttatatagaa 363
            ||||||||||||| ||||||||||
Sbjct: 4261 tgaacatactgtatttatatagaa 4284



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 340 tgaacatactgtacttatatagaa 363
           ||||||||||||| ||||||||||
Sbjct: 804 tgaacatactgtatttatatagaa 827
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>gb|AC007204.1|AC007204 Homo sapiens chromosome 19, BAC 273239 (CIT-B-320G13), complete
             sequence
          Length = 109478

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   attattttgttcataaatct 260
             ||||||||||||||||||||
Sbjct: 19372 attattttgttcataaatct 19353
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>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   aataatagttttcagttttc 382
             ||||||||||||||||||||
Sbjct: 89556 aataatagttttcagttttc 89537
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>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence
          Length = 168722

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   cagagatagttaacaggtta 189
             ||||||||||||||||||||
Sbjct: 90762 cagagatagttaacaggtta 90743
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>dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-636L7, complete
             sequence
          Length = 91242

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   aataatagttttcagttttc 382
             ||||||||||||||||||||
Sbjct: 42694 aataatagttttcagttttc 42675
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>emb|BX470094.10| Mouse DNA sequence from clone RP23-130F16 on chromosome X, complete
            sequence
          Length = 22724

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  tatttatgattttgaatttt 299
            ||||||||||||||||||||
Sbjct: 6025 tatttatgattttgaatttt 6006
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>emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, complete sequence
          Length = 120606

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 559   tcctgatttggagaatgtat 578
             ||||||||||||||||||||
Sbjct: 62700 tcctgatttggagaatgtat 62719
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>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence
          Length = 195993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    ttctgatgcatttttcttca 451
              ||||||||||||||||||||
Sbjct: 122508 ttctgatgcatttttcttca 122527
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>emb|CR381658.11| Zebrafish DNA sequence from clone CH211-245M20 in linkage group 3,
              complete sequence
          Length = 159132

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    aatgtgtatgttatatattt 333
              ||||||||||||||||||||
Sbjct: 128091 aatgtgtatgttatatattt 128110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,226,557
Number of Sequences: 3902068
Number of extensions: 7226557
Number of successful extensions: 168992
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 168766
Number of HSP's gapped (non-prelim): 226
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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