ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags34b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
2dbj|AK063787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 5e-25
3ref|XM_479340.1| Oryza sativa (japonica cultivar-group), mRNA 113 5e-22
4gb|BT016940.1| Zea mays clone E04912704F04.c mRNA sequence 111 2e-21
5dbj|AK058954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
6gb|AY111015.1| Zea mays CL4951_1 mRNA sequence 103 5e-19
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
8dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
11dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
12gb|AF269239.1|AF269239 Mus musculus plasmid rescue fragment sequ... 42 1.5
13gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complet... 42 1.5
14gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete... 40 5.9
15gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, comp... 40 5.9
16emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chro... 40 5.9
17emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chro... 40 5.9
18gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, comp... 40 5.9
19gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, compl... 40 5.9
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
21gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, com... 40 5.9
22gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74... 40 5.9
23gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, r... 40 5.9
24gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
25emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.9
26emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.9
27emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on ch... 40 5.9
28emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 5.9
29gb|J05100.1|SRAAFPG Sea raven (H.americanus) antifreeze protein ... 40 5.9 
>dbj|AK122146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138B10, full
           insert sequence
          Length = 534

 Score =  123 bits (62), Expect = 5e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                       
Query: 52  agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 111
           ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 180 agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 239

                                                                       
Query: 112 tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtg 171
           ||| |||||||||||||||||| || ||||| | |||||||||||| ||||| || ||||
Sbjct: 240 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgataggccgtg 299

                                                     
Query: 172 ggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 213
           || | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 300 gggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 341
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>dbj|AK063787.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E01, full
           insert sequence
          Length = 622

 Score =  123 bits (62), Expect = 5e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                       
Query: 52  agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 111
           ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 96  agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 155

                                                                       
Query: 112 tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtg 171
           ||| |||||||||||||||||| || ||||| | |||||||||||| ||||| || ||||
Sbjct: 156 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgataggccgtg 215

                                                     
Query: 172 ggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 213
           || | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 216 gggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 257
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>ref|XM_479340.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 483

 Score =  113 bits (57), Expect = 5e-22
 Identities = 162/197 (82%)
 Strand = Plus / Plus

                                                                       
Query: 14  agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 73
           |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 98  agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 157

                                                                       
Query: 74  gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 133
            | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 158 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 217

                                                                       
Query: 134 tgcgcttgctggctccagcttgttcatgattggtcgtgggatctacaacatgtctaacgg 193
           |||||| |||||| ||||||||||||||||||| |||||  | |||||||||||  ||||
Sbjct: 218 tgcgctggctggcaccagcttgttcatgattggccgtggagtttacaacatgtcccacgg 277

                            
Query: 194 gatcgggaaaaaggagt 210
            || |||||||| ||||
Sbjct: 278 tattgggaaaaaagagt 294



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 336 tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 380
           ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 397 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 441
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>gb|BT016940.1| Zea mays clone E04912704F04.c mRNA sequence
          Length = 462

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 61  atttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcggtcatctccg 120
           ||||||||||| ||| |||||| | | |||| ||||| || ||||||| | ||| |||||
Sbjct: 316 atttccagaacatgaccaagcacacctacctgaaagggcgctacgatgtgatcacctccg 257

                                                                       
Query: 121 ttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtgggatctaca 180
           ||||||| || ||||| ||||||| ||||||| ||||||||||||| |||||  | ||||
Sbjct: 256 ttgccatccctcttgcacttgctgcctccagcatgttcatgattgggcgtggagtttaca 197

                                           
Query: 181 acatgtctaacgggatcgggaaaaaggagtga 212
           |||||||| | || || |||||||||||||||
Sbjct: 196 acatgtctcatggaattgggaaaaaggagtga 165
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>dbj|AK058954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-B01, full
           insert sequence
          Length = 483

 Score =  105 bits (53), Expect = 1e-19
 Identities = 149/181 (82%)
 Strand = Plus / Plus

                                                                       
Query: 30  ccacgtgagaagcttgttcagaagcagcagtatttccagaacttgagcaagcatatccac 89
           ||||||||||||||  || || | ||||| ||||| ||||| || | |||||| | | ||
Sbjct: 114 ccacgtgagaagctgtttaagcaacagcaatattttcagaatttaaccaagcacacctac 173

                                                                       
Query: 90  cttaaaggccgttacgatgcggtcatctccgttgccattccccttgcgcttgctggctcc 149
           || || || |||||||||| | |||  || |||||||||||||||||||| |||||| ||
Sbjct: 174 ctgaaggggcgttacgatgtgatcacatctgttgccattccccttgcgctggctggcacc 233

                                                                       
Query: 150 agcttgttcatgattggtcgtgggatctacaacatgtctaacgggatcgggaaaaaggag 209
           ||||||||||||||||| |||||  | |||||||||||  |||| || |||||||| |||
Sbjct: 234 agcttgttcatgattggccgtggagtttacaacatgtcccacggtattgggaaaaaagag 293

            
Query: 210 t 210
           |
Sbjct: 294 t 294



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 336 tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 380
           ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 397 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 441
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>gb|AY111015.1| Zea mays CL4951_1 mRNA sequence
          Length = 656

 Score =  103 bits (52), Expect = 5e-19
 Identities = 127/152 (83%)
 Strand = Plus / Plus

                                                                       
Query: 61  atttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcggtcatctccg 120
           ||||||||||| ||| |||||| | | |||| ||||| || ||||||| | ||| |||||
Sbjct: 133 atttccagaacatgaccaagcacacctacctgaaagggcgctacgatgtgatcacctccg 192

                                                                       
Query: 121 ttgccattccccttgcgcttgctggctccagcttgttcatgattggtcgtgggatctaca 180
           ||||||| || ||||| ||||||| ||||||| ||||||||||||| |||||  | ||||
Sbjct: 193 ttgccatccctcttgcacttgctgcctccagcatgttcatgattgggcgtggagtttaca 252

                                           
Query: 181 acatgtctaacgggatcgggaaaaaggagtga 212
           |||||||| | || || ||||| |||||||||
Sbjct: 253 acatgtctcatggaattgggaagaaggagtga 284
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                            
Query: 14       agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 73
                |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 26987763 agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 26987822

                                                                            
Query: 74       gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 133
                 | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 26987823 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 26987882

                                                
Query: 134      tgcgcttgctggctccagcttgttcatgattg 165
                |||||| |||||| ||||||||||||||||||
Sbjct: 26987883 tgcgctggctggcaccagcttgttcatgattg 26987914



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 336      tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 380
                ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 26988156 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 26988200
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>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1316_A04
          Length = 87144

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                         
Query: 14    agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 73
             |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 52241 agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 52300

                                                                         
Query: 74    gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 133
              | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 52301 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 52360

                                             
Query: 134   tgcgcttgctggctccagcttgttcatgattg 165
             |||||| |||||| ||||||||||||||||||
Sbjct: 52361 tgcgctggctggcaccagcttgttcatgattg 52392



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 336   tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 380
             ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 52634 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 52678
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>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0503D09
          Length = 144443

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 126/152 (82%)
 Strand = Plus / Plus

                                                                          
Query: 14     agaggcaccattttacccacgtgagaagcttgttcagaagcagcagtatttccagaactt 73
              |||||||||||||   ||||||||||||||  || || | ||||| ||||| ||||| ||
Sbjct: 136354 agaggcaccatttgtgccacgtgagaagctgtttaagcaacagcaatattttcagaattt 136413

                                                                          
Query: 74     gagcaagcatatccaccttaaaggccgttacgatgcggtcatctccgttgccattcccct 133
               | |||||| | | |||| || || |||||||||| | |||  || ||||||||||||||
Sbjct: 136414 aaccaagcacacctacctgaaggggcgttacgatgtgatcacatctgttgccattcccct 136473

                                              
Query: 134    tgcgcttgctggctccagcttgttcatgattg 165
              |||||| |||||| ||||||||||||||||||
Sbjct: 136474 tgcgctggctggcaccagcttgttcatgattg 136505



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 336    tttgttggtatttgtggatatttgatgtcagcaaattgatgctaa 380
              ||||||| |||||||  |||| |||||||||||||||||||||||
Sbjct: 136747 tttgttgttatttgtttatatctgatgtcagcaaattgatgctaa 136791
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                           
Query: 52      agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 111
               ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 3345407 agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 3345348

                                                                   
Query: 112     tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgat 163
               ||| |||||||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 3345347 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgat 3345296



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 168     cgtgggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 213
               |||||| | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 3345195 cgtggggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 3345150
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>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_G05
          Length = 141860

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                         
Query: 52    agcagcagtatttccagaacttgagcaagcatatccaccttaaaggccgttacgatgcgg 111
             ||||||||||||| |||||||||| |||||| |   | || ||||| ||||| |||| ||
Sbjct: 94267 agcagcagtattttcagaacttgaccaagcacacgtatctgaaagggcgttatgatgtgg 94208

                                                                 
Query: 112   tcatctccgttgccattccccttgcgcttgctggctccagcttgttcatgat 163
             ||| |||||||||||||||||| || ||||| | |||||||||||| |||||
Sbjct: 94207 tcacctccgttgccattcccctcgctcttgccgcctccagcttgtttatgat 94156



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 168   cgtgggatctacaacatgtctaacgggatcgggaaaaaggagtgaa 213
             |||||| | |||||||||||| | ||  ||||||||||||||||||
Sbjct: 94055 cgtggggtgtacaacatgtctcatggagtcgggaaaaaggagtgaa 94010
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>gb|AF269239.1|AF269239 Mus musculus plasmid rescue fragment sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 tattgtcagagaaagactgag 318
           |||||||||||||||||||||
Sbjct: 647 tattgtcagagaaagactgag 667
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>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence
          Length = 190949

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 317    agttcatttccagttctcttttgtt 341
              ||||||||||||| |||||||||||
Sbjct: 173908 agttcatttccagctctcttttgtt 173932
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>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence
          Length = 191907

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    agcaaattgatgctaaactg 384
              ||||||||||||||||||||
Sbjct: 161842 agcaaattgatgctaaactg 161861
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>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence
          Length = 196167

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 317    agttcatttccagttctcttttgt 340
              |||||||||||||||||| |||||
Sbjct: 139750 agttcatttccagttctcatttgt 139773
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>emb|AL135908.13| Human DNA sequence from clone RP1-28O17 on chromosome 6 Contains a
            novel gene, complete sequence
          Length = 148503

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  attgtcagagaaagactgag 318
            ||||||||||||||||||||
Sbjct: 3930 attgtcagagaaagactgag 3911
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>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
              sequence
          Length = 199961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    gcatcattatcctttctgtt 427
              ||||||||||||||||||||
Sbjct: 139987 gcatcattatcctttctgtt 139968
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>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence
          Length = 157442

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  cagcaaattgatgctaaact 383
            ||||||||||||||||||||
Sbjct: 7293 cagcaaattgatgctaaact 7312
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>gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, complete sequence
          Length = 165698

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    caaataatattgtcagagaaagac 314
              |||||||| |||||||||||||||
Sbjct: 127257 caaataattttgtcagagaaagac 127234
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ggatggcgcacgaagaggca 20
              ||||||||||||||||||||
Sbjct: 416147 ggatggcgcacgaagaggca 416128
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>gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, complete sequence
          Length = 192490

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 291  caaataatattgtcagagaaagac 314
            |||||||| |||||||||||||||
Sbjct: 7969 caaataattttgtcagagaaagac 7946
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>gb|AE003665.4| Drosophila melanogaster chromosome 2L, section 74 of 83 of the complete
              sequence
          Length = 157875

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    agcaaattgatgctaaactg 384
              ||||||||||||||||||||
Sbjct: 154663 agcaaattgatgctaaactg 154644
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>gb|AC006215.1|AC006215 Drosophila melanogaster, chromosome 2L, region 38C1-38C2, P1 clones
             DS01096 and DS00956, complete sequence
          Length = 106735

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   agcaaattgatgctaaactg 384
             ||||||||||||||||||||
Sbjct: 74985 agcaaattgatgctaaactg 75004
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ggatggcgcacgaagaggca 20
              ||||||||||||||||||||
Sbjct: 416147 ggatggcgcacgaagaggca 416128
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ggatggcgcacgaagaggca 20
              ||||||||||||||||||||
Sbjct: 149198 ggatggcgcacgaagaggca 149179
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      ggatggcgcacgaagaggca 20
              ||||||||||||||||||||
Sbjct: 130625 ggatggcgcacgaagaggca 130644
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>emb|AL807375.14| Mouse DNA sequence from clone RP23-247H23 on chromosome X, complete
             sequence
          Length = 143779

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   ctcttttgttggtatttgtg 351
             ||||||||||||||||||||
Sbjct: 54460 ctcttttgttggtatttgtg 54479
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    ttggtatttgtggatatttgatgt 363
              ||||||||| ||||||||||||||
Sbjct: 165506 ttggtatttctggatatttgatgt 165529
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>gb|J05100.1|SRAAFPG Sea raven (H.americanus) antifreeze protein type II gene, complete
           cds
          Length = 2420

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 200 gaaaaaggagtgaatttctg 219
           ||||||||||||||||||||
Sbjct: 26  gaaaaaggagtgaatttctg 7


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,826,419
Number of Sequences: 3902068
Number of extensions: 3826419
Number of successful extensions: 73787
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73642
Number of HSP's gapped (non-prelim): 141
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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