| Clone Name | bags34a22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154G15, full insert sequence Length = 1948 Score = 494 bits (249), Expect = e-136 Identities = 408/461 (88%) Strand = Plus / Plus Query: 1 tcctcgcccacccaggacgccatcatggccgacctcggcctcaccctctccgagttctct 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 359 tcctcgcccacccaggacgccatcatctccgacctcggcctcaccctctccgagttctcg 418 Query: 61 ttattcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatc 120 | ||||| || ||||| ||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 419 ctgttcgggtcgctgtcgaacgtcggggcaatggtgggcgccatcgccagcggccagatc 478 Query: 121 gccgagtacatcggccgtaaagggtctctgatgatcgccgcaatcccgaacatcattggg 180 ||||||||||||||||| || |||||||| |||||||| ||||| || ||||| |||||| Sbjct: 479 gccgagtacatcggccgcaaggggtctctcatgatcgcggcaattcctaacattattggg 538 Query: 181 tggcttgcaatatcatttgcaaatgattcttcattcttgttcatgggccgtctgctggaa 240 ||||| |||||||| |||||||| || || || || ||||| |||||||| |||||||| Sbjct: 539 tggctcgcaatatcttttgcaaaggactcatcctttttgtttatgggccgattgctggaa 598 Query: 241 ggatttggggtcggtgtgatatcctacacggtgccagtttatatagcagaaattgctcca 300 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 599 ggatttggggtcggcgtgatatcctatgtggtgccagtttatatagcagaaattgctcca 658 Query: 301 cagaacatgagaggagctcttggttcagtcaatcagctctctgttacaatcggtatattg 360 || | |||||||||||||||||||||||||||||||| |||||||| || || |||||| Sbjct: 659 caaacaatgagaggagctcttggttcagtcaatcagctttctgttactattggcatattg 718 Query: 361 cttgcctacacattaggcatgtttgttccttggagaattctttctgttcttggcatttta 420 ||||||||| ||||||||||||||||| ||||||||||| || ||||| || |||||| Sbjct: 719 cttgcctacttgttaggcatgtttgttccctggagaattctctccgttctcggtatttta 778 Query: 421 ccttgctcaatcctgatacctgggctgttcttcatccctga 461 || || ||||| ||||||||||| ||||||| |||||||| Sbjct: 779 ccatgttcaattctgatacctggattgttctttatccctga 819
>dbj|AK100792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121D20, full insert sequence Length = 1870 Score = 182 bits (92), Expect = 7e-43 Identities = 266/324 (82%) Strand = Plus / Plus Query: 13 caggacgccatcatggccgacctcggcctcaccctctccgagttctctttattcggatcc 72 |||||||||||||| ||||||| ||||||||||||||||||||| | |||||||| Sbjct: 429 caggacgccatcatccgagacctcgacctcaccctctccgagttctcggtgttcggatcg 488 Query: 73 ctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgccgagtacatc 132 |||||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||| Sbjct: 489 ctgtccaacgtcggcgccatggttggggcgattgccagtggtcagatggccgagtacatt 548 Query: 133 ggccgtaaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaata 192 || || |||||||| ||||||| || ||||| || ||||||||||| |||||||| || Sbjct: 549 gggcgcaaagggtcattgatgattgctgcaattccaaacatcattggttggcttgccatc 608 Query: 193 tcatttgcaaatgattcttcattcttgttcatgggccgtctgctggaaggatttggggtc 252 || |||||||| || || || || | | ||||| || |||| || || ||||| || Sbjct: 609 tcctttgcaaaagactcatcgtttctttatatgggacgattgctcgaggggtttggtgtt 668 Query: 253 ggtgtgatatcctacacggtgccagtttatatagcagaaattgctccacagaacatgaga 312 ||||| || || || |||||||||||||| ||||||||||| | || || ||||||||| Sbjct: 669 ggtgtcatctcttatacggtgccagtttacatagcagaaatatcacctcaaaacatgaga 728 Query: 313 ggagctcttggttcagtcaatcag 336 || |||||||| ||||| |||||| Sbjct: 729 ggtgctcttggctcagtgaatcag 752
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 109 bits (55), Expect = 8e-21 Identities = 64/67 (95%) Strand = Plus / Minus Query: 270 ggtgccagtttatatagcagaaattgctccacagaacatgagaggagctcttggttcagt 329 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 29968 ggtgccagtttatatagcagaaattgctccacaaacaatgagaggagctcttggttcagt 29909 Query: 330 caatcag 336 ||||||| Sbjct: 29908 caatcag 29902 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 31272 ttcgggtcgctgtcgaacgtcggggcaatggtgggcgccatcgccagcggccagatcgcc 31213 Query: 124 gagtacatcggccg 137 |||||||||||||| Sbjct: 31212 gagtacatcggccg 31199 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 1 tcctcgcccacccaggacgccatcatggccgacctcggcctcaccctctccgag 54 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31439 tcctcgcccacccaggacgccatcatctccgacctcggcctcaccctctccgag 31386 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 333 tcagctctctgttacaatcggtatattgcttgcctacacattaggcatgtttgttccttg 392 |||||| |||||||| || || ||||||||||||||| ||||||||||||||||| || Sbjct: 29813 tcagctttctgttactattggcatattgcttgcctacttgttaggcatgtttgttccctg 29754 Query: 393 gagaattctttctgttct 410 ||||||||| || ||||| Sbjct: 29753 gagaattctctccgttct 29736 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 217 ttgttcatgggccgtctgctggaaggatttggggtcggtgtgatatccta 266 ||||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 30773 ttgtttatgggccgattgctggaaggatttggggtcggcgtgatatccta 30724 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 144 gtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 |||||| |||||||| ||||| || ||||| ||||||||||| |||||||| |||||||| Sbjct: 30934 gtctctcatgatcgcggcaattcctaacattattgggtggctcgcaatatcttttgcaaa 30875 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 415 attttaccttgctcaatcctgatacctgggctgttcttcatccctga 461 |||||||| || ||||| ||||||||||| ||||||| |||||||| Sbjct: 29581 attttaccatgttcaattctgatacctggattgttctttatccctga 29535
>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence Length = 99587 Score = 109 bits (55), Expect = 8e-21 Identities = 64/67 (95%) Strand = Plus / Minus Query: 270 ggtgccagtttatatagcagaaattgctccacagaacatgagaggagctcttggttcagt 329 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 17259 ggtgccagtttatatagcagaaattgctccacaaacaatgagaggagctcttggttcagt 17200 Query: 330 caatcag 336 ||||||| Sbjct: 17199 caatcag 17193 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 18563 ttcgggtcgctgtcgaacgtcggggcaatggtgggcgccatcgccagcggccagatcgcc 18504 Query: 124 gagtacatcggccg 137 |||||||||||||| Sbjct: 18503 gagtacatcggccg 18490 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 1 tcctcgcccacccaggacgccatcatggccgacctcggcctcaccctctccgag 54 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 18730 tcctcgcccacccaggacgccatcatctccgacctcggcctcaccctctccgag 18677 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 333 tcagctctctgttacaatcggtatattgcttgcctacacattaggcatgtttgttccttg 392 |||||| |||||||| || || ||||||||||||||| ||||||||||||||||| || Sbjct: 17104 tcagctttctgttactattggcatattgcttgcctacttgttaggcatgtttgttccctg 17045 Query: 393 gagaattctttctgttct 410 ||||||||| || ||||| Sbjct: 17044 gagaattctctccgttct 17027 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 217 ttgttcatgggccgtctgctggaaggatttggggtcggtgtgatatccta 266 ||||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 18064 ttgtttatgggccgattgctggaaggatttggggtcggcgtgatatccta 18015 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 144 gtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 |||||| |||||||| ||||| || ||||| ||||||||||| |||||||| |||||||| Sbjct: 18225 gtctctcatgatcgcggcaattcctaacattattgggtggctcgcaatatcttttgcaaa 18166 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 415 attttaccttgctcaatcctgatacctgggctgttcttcatccctga 461 |||||||| || ||||| ||||||||||| ||||||| |||||||| Sbjct: 16872 attttaccatgttcaattctgatacctggattgttctttatccctga 16826
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 109 bits (55), Expect = 8e-21 Identities = 64/67 (95%) Strand = Plus / Minus Query: 270 ggtgccagtttatatagcagaaattgctccacagaacatgagaggagctcttggttcagt 329 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 28602176 ggtgccagtttatatagcagaaattgctccacaaacaatgagaggagctcttggttcagt 28602117 Query: 330 caatcag 336 ||||||| Sbjct: 28602116 caatcag 28602110 Score = 99.6 bits (50), Expect = 8e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 28603480 ttcgggtcgctgtcgaacgtcggggcaatggtgggcgccatcgccagcggccagatcgcc 28603421 Query: 124 gagtacatcggccg 137 |||||||||||||| Sbjct: 28603420 gagtacatcggccg 28603407 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 1 tcctcgcccacccaggacgccatcatggccgacctcggcctcaccctctccgag 54 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 28603647 tcctcgcccacccaggacgccatcatctccgacctcggcctcaccctctccgag 28603594 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 |||||||| |||||||||||||| |||||||| || || ||||||||||| ||||| ||| Sbjct: 28045140 ttcggatcgctgtccaacgtcggcgccatggttggggcgattgccagtggtcagatggcc 28045199 Query: 124 gagtacatcggccgtaaaggg 144 |||||||| || || |||||| Sbjct: 28045200 gagtacattgggcgcaaaggg 28045220 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 333 tcagctctctgttacaatcggtatattgcttgcctacacattaggcatgtttgttccttg 392 |||||| |||||||| || || ||||||||||||||| ||||||||||||||||| || Sbjct: 28602021 tcagctttctgttactattggcatattgcttgcctacttgttaggcatgtttgttccctg 28601962 Query: 393 gagaattctttctgttct 410 ||||||||| || ||||| Sbjct: 28601961 gagaattctctccgttct 28601944 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 217 ttgttcatgggccgtctgctggaaggatttggggtcggtgtgatatccta 266 ||||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 28602981 ttgtttatgggccgattgctggaaggatttggggtcggcgtgatatccta 28602932 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 ||||| || |||||||||||||| |||||||| || || || |||||||| ||||| || Sbjct: 28038587 ttcggttcgctgtccaacgtcggcgccatggtcggagcgatcgccagtgggcagatggcg 28038646 Query: 124 gagtacatcggccgtaaaggg 144 |||||||| ||||| |||||| Sbjct: 28038647 gagtacattggccggaaaggg 28038667 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 144 gtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 |||||| |||||||| ||||| || ||||| ||||||||||| |||||||| |||||||| Sbjct: 28603142 gtctctcatgatcgcggcaattcctaacattattgggtggctcgcaatatcttttgcaaa 28603083 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 270 ggtgccagtttatatagcagaaattgctccacagaacatgagaggagctcttggttcagt 329 |||||||||||| ||||||||||| | || || ||||||||||| |||||||| ||||| Sbjct: 28046160 ggtgccagtttacatagcagaaatatcacctcaaaacatgagaggtgctcttggctcagt 28046219 Query: 330 caatcag 336 |||||| Sbjct: 28046220 gaatcag 28046226 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 415 attttaccttgctcaatcctgatacctgggctgttcttcatccctga 461 |||||||| || ||||| ||||||||||| ||||||| |||||||| Sbjct: 28601789 attttaccatgttcaattctgatacctggattgttctttatccctga 28601743 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 149 tgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 ||||||| || ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 28045774 tgatgattgctgcaattccaaacatcattggttggcttgccatctcctttgcaaa 28045828 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 13 caggacgccatcatggccgacctcggcctcaccctctccgag 54 |||||||||||||| ||||||| |||||||||||||||| Sbjct: 28044991 caggacgccatcatccgagacctcgacctcaccctctccgag 28045032 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 taggcatgtttgttccttggag 395 |||||||||||||||||||||| Sbjct: 28039756 taggcatgtttgttccttggag 28039777 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 tcctcgcccacccaggacgccatcat 26 ||||| |||||||||||||||||||| Sbjct: 28038427 tcctcacccacccaggacgccatcat 28038452 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ggcatgtttgttccttggag 395 |||||||||||||||||||| Sbjct: 28046369 ggcatgtttgttccttggag 28046388
>dbj|AK065497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023P09, full insert sequence Length = 2266 Score = 103 bits (52), Expect = 5e-19 Identities = 217/272 (79%) Strand = Plus / Plus Query: 1 tcctcgcccacccaggacgccatcatggccgacctcggcctcaccctctccgagttctct 60 ||||| |||||||||||||||||||| ||||||| ||| || ||||||||||||| Sbjct: 323 tcctcacccacccaggacgccatcatccgcgacctcaagctctccatctccgagttctcg 382 Query: 61 ttattcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatc 120 ||||| || |||||||||||||| |||||||| || || || |||||||| ||||| Sbjct: 383 gctttcggttcgctgtccaacgtcggcgccatggtcggagcgatcgccagtgggcagatg 442 Query: 121 gccgagtacatcggccgtaaagggtctctgatgatcgccgcaatcccgaacatcattggg 180 || |||||||| ||||| |||||||| |||| || || || | || ||||||||||| Sbjct: 443 gcggagtacattggccggaaagggtcgttgataattgcggcggttcctaacatcattggt 502 Query: 181 tggcttgcaatatcatttgcaaatgattcttcattcttgttcatgggccgtctgctggaa 240 |||||||| || || |||||||| || | ||||| || | |||||| || |||| ||| Sbjct: 503 tggcttgccatctcctttgcaaaagacgcgtcatttttatacatgggacgcttgcttgaa 562 Query: 241 ggatttggggtcggtgtgatatcctacacggt 272 || ||||| || ||||| ||||| || ||||| Sbjct: 563 ggttttggtgttggtgttatatcatatacggt 594 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 taggcatgtttgttccttggag 395 |||||||||||||||||||||| Sbjct: 918 taggcatgtttgttccttggag 939
>gb|U43629.1|BVU43629 Beta vulgaris integral membrane protein mRNA, complete cds Length = 2020 Score = 87.7 bits (44), Expect = 3e-14 Identities = 179/224 (79%) Strand = Plus / Plus Query: 139 aaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcattt 198 ||||||||| ||||||| || || ||||| ||||| ||||| |||||||| ||||||||| Sbjct: 538 aaagggtctttgatgattgctgctatccccaacataattggatggcttgctatatcattt 597 Query: 199 gcaaatgattcttcattcttgttcatgggccgtctgctggaaggatttggggtcggtgtg 258 || || ||||||||||| ||| ||||| | || ||||||| ||||| || || | Sbjct: 598 gccaaagattcttcatttctgtatatgggaaggatgttggaaggttttggcgtgggaata 657 Query: 259 atatcctacacggtgccagtttatatagcagaaattgctccacagaacatgagaggagct 318 ||||| |||||||| || || || || | ||||| || |||||||| |||| |||||| Sbjct: 658 atatcttacacggttcctgtgtacatttctgaaatagcaccacagaatttgaggggagct 717 Query: 319 cttggttcagtcaatcagctctctgttacaatcggtatattgct 362 | |||||||| || ||||| || ||||||||||||||| |||| Sbjct: 718 ttgggttcagtaaaccagctatccgttacaatcggtataatgct 761
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 |||||||| |||||||||||||| |||||||| || || ||||||||||| ||||| ||| Sbjct: 125305 ttcggatcgctgtccaacgtcggcgccatggttggggcgattgccagtggtcagatggcc 125364 Query: 124 gagtacatcggccgtaaaggg 144 |||||||| || || |||||| Sbjct: 125365 gagtacattgggcgcaaaggg 125385 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 ||||| || |||||||||||||| |||||||| || || || |||||||| ||||| || Sbjct: 118752 ttcggttcgctgtccaacgtcggcgccatggtcggagcgatcgccagtgggcagatggcg 118811 Query: 124 gagtacatcggccgtaaaggg 144 |||||||| ||||| |||||| Sbjct: 118812 gagtacattggccggaaaggg 118832 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 270 ggtgccagtttatatagcagaaattgctccacagaacatgagaggagctcttggttcagt 329 |||||||||||| ||||||||||| | || || ||||||||||| |||||||| ||||| Sbjct: 126325 ggtgccagtttacatagcagaaatatcacctcaaaacatgagaggtgctcttggctcagt 126384 Query: 330 caatcag 336 |||||| Sbjct: 126385 gaatcag 126391 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 149 tgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 ||||||| || ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 125939 tgatgattgctgcaattccaaacatcattggttggcttgccatctcctttgcaaa 125993 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 13 caggacgccatcatggccgacctcggcctcaccctctccgag 54 |||||||||||||| ||||||| |||||||||||||||| Sbjct: 125156 caggacgccatcatccgagacctcgacctcaccctctccgag 125197 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 taggcatgtttgttccttggag 395 |||||||||||||||||||||| Sbjct: 119921 taggcatgtttgttccttggag 119942 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 tcctcgcccacccaggacgccatcat 26 ||||| |||||||||||||||||||| Sbjct: 118592 tcctcacccacccaggacgccatcat 118617 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ggcatgtttgttccttggag 395 |||||||||||||||||||| Sbjct: 126534 ggcatgtttgttccttggag 126553
>dbj|AK108622.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D06, full insert sequence Length = 1631 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 64 ttcggatccctgtccaacgtcggggccatggtgggcgccattgccagtggccagatcgcc 123 |||||||| |||||||||||||| |||||||| || || ||||||||||| ||||| ||| Sbjct: 722 ttcggatcgctgtccaacgtcggcgccatggttggggcgattgccagtggtcagatggcc 781 Query: 124 gagtacatcggccgtaaaggg 144 |||||||| || || |||||| Sbjct: 782 gagtacattgggcgcaaaggg 802 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 149 tgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 ||||||| || ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 1356 tgatgattgctgcaattccaaacatcattggttggcttgccatctcctttgcaaa 1410 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 13 caggacgccatcatggccgacctcggcctcaccctctccgag 54 |||||||||||||| ||||||| |||||||||||||||| Sbjct: 577 caggacgccatcatccgagacctcgacctcaccctctccgag 618
>ref|NM_106178.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT1G75220 mRNA, complete cds Length = 1911 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 103 attgccagtggccagatcgccgagtacatcggccgtaaagggtctctgatgatcgccgca 162 ||||||||||| ||||| || || ||||| || || ||||||||||| ||||| || ||| Sbjct: 532 attgccagtggtcagattgcagaatacattggacgaaaagggtctcttatgattgctgca 591 Query: 163 atcccgaacatcattgggtggcttgcaatatcatttgcaaatgattcttc 212 || || || |||||||| |||||| |||||||||||||| ||| |||| Sbjct: 592 attcccaatatcattggatggctttgcatatcatttgcaaaagatacttc 641
>gb|AY124845.1| Arabidopsis thaliana At1g75220/F22H5_6 mRNA, complete cds Length = 1464 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 103 attgccagtggccagatcgccgagtacatcggccgtaaagggtctctgatgatcgccgca 162 ||||||||||| ||||| || || ||||| || || ||||||||||| ||||| || ||| Sbjct: 307 attgccagtggtcagattgcagaatacattggacgaaaagggtctcttatgattgctgca 366 Query: 163 atcccgaacatcattgggtggcttgcaatatcatttgcaaatgattcttc 212 || || || |||||||| |||||| |||||||||||||| ||| |||| Sbjct: 367 attcccaatatcattggatggctttgcatatcatttgcaaaagatacttc 416
>gb|AF412060.1|AF412060 Arabidopsis thaliana At1g75220/F22H5_6 mRNA, complete cds Length = 1695 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 103 attgccagtggccagatcgccgagtacatcggccgtaaagggtctctgatgatcgccgca 162 ||||||||||| ||||| || || ||||| || || ||||||||||| ||||| || ||| Sbjct: 318 attgccagtggtcagattgcagaatacattggacgaaaagggtctcttatgattgctgca 377 Query: 163 atcccgaacatcattgggtggcttgcaatatcatttgcaaatgattcttc 212 || || || |||||||| |||||| |||||||||||||| ||| |||| Sbjct: 378 attcccaatatcattggatggctttgcatatcatttgcaaaagatacttc 427
>ref|NM_101801.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT1G19450 mRNA, complete cds Length = 1953 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 139 aaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcattt 198 ||||||||||||||||| || ||||| || || || ||||| |||||| | ||||||||| Sbjct: 595 aaagggtctctgatgattgctgcaattcccaatattattggatggctttcgatatcattt 654 Query: 199 gcaaatgattcttc 212 ||||| ||| |||| Sbjct: 655 gcaaaagatacttc 668 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 tcctacacggtgccagtttatatagcagaaattgctccacagaacatgagaggagctctt 321 ||||| ||||| || || |||||||| || || |||||||||| |||||||||||| | Sbjct: 718 tcctatacggttcccgtatatatagctgagatcgctccacagaccatgagaggagcctta 777 Query: 322 ggttcagtcaatcagctctctgttacaat 350 |||||||| || ||||| ||||| ||||| Sbjct: 778 ggttcagttaaccagctttctgtaacaat 806
>gb|AY093274.1| Arabidopsis thaliana similar to integral membrane protein (At1g19450) mRNA, complete cds Length = 1557 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 139 aaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcattt 198 ||||||||||||||||| || ||||| || || || ||||| |||||| | ||||||||| Sbjct: 346 aaagggtctctgatgattgctgcaattcccaatattattggatggctttcgatatcattt 405 Query: 199 gcaaatgattcttc 212 ||||| ||| |||| Sbjct: 406 gcaaaagatacttc 419 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 tcctacacggtgccagtttatatagcagaaattgctccacagaacatgagaggagctctt 321 ||||| ||||| || || |||||||| || || |||||||||| |||||||||||| | Sbjct: 469 tcctatacggttcccgtatatatagctgagatcgctccacagaccatgagaggagcctta 528 Query: 322 ggttcagtcaatcagctctctgttacaat 350 |||||||| || ||||| ||||| ||||| Sbjct: 529 ggttcagttaaccagctttctgtaacaat 557
>gb|AF462803.1|AF462803 Arabidopsis thaliana At1g19450/F18O14_20 mRNA sequence Length = 1914 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 139 aaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcattt 198 ||||||||||||||||| || ||||| || || || ||||| |||||| | ||||||||| Sbjct: 596 aaagggtctctgatgattgctgcaattcccaatattattggatggctttcgatatcattt 655 Query: 199 gcaaatgattcttc 212 ||||| ||| |||| Sbjct: 656 gcaaaagatacttc 669 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 tcctacacggtgccagtttatatagcagaaattgctccacagaacatgagaggagctctt 321 ||||| ||||| || || |||||||| || || |||||||||| |||||||||||| | Sbjct: 719 tcctatacggttcccgtatatatagctgagatcgctccacagaccatgagaggagcctta 778 Query: 322 ggttcagtcaatcagctctctgttacaat 350 |||||||| || ||||| ||||| ||||| Sbjct: 779 ggttcagttaaccagctttctgtaacaat 807
>gb|AY059848.1| Arabidopsis thaliana similar to integral membrane protein (At1g19450; F18O14.22) mRNA, complete cds Length = 1866 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 139 aaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcattt 198 ||||||||||||||||| || ||||| || || || ||||| |||||| | ||||||||| Sbjct: 594 aaagggtctctgatgattgctgcaattcccaatattattggatggctttcgatatcattt 653 Query: 199 gcaaatgattcttc 212 ||||| ||| |||| Sbjct: 654 gcaaaagatacttc 667 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 tcctacacggtgccagtttatatagcagaaattgctccacagaacatgagaggagctctt 321 ||||| ||||| || || |||||||| || || |||||||||| |||||||||||| | Sbjct: 717 tcctatacggttcccgtatatatagctgagatcgctccacagaccatgagaggagcctta 776 Query: 322 ggttcagtcaatcagctctctgttacaat 350 |||||||| || ||||| ||||| ||||| Sbjct: 777 ggttcagttaaccagctttctgtaacaat 805
>emb|BX815012.1|CNS0ACUK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1837 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 262 tcctacacggtgccagtttatatagcagaaattgctccacagaacatgagaggagctctt 321 ||||| ||||| || || |||||||| || || |||||||||| |||||||||||| | Sbjct: 657 tcctatacggttcccgtatatatagctgagatcgctccacagaccatgagaggagcctta 716 Query: 322 ggttcagtcaatcagctctctgttacaat 350 |||||||| || ||||| ||||| ||||| Sbjct: 717 ggttcagttaaccagctttctgtaacaat 745 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 139 aaagggtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcattt 198 ||||||||||||||||| || ||||| || || || ||||| |||||| | ||||||||| Sbjct: 534 aaagggtctctgatgattgctgcaattcccaatattattggatggctttcgatatcattt 593 Query: 199 gc 200 || Sbjct: 594 gc 595
>gb|AY107028.1| Zea mays PCO120720 mRNA sequence Length = 643 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 1 tcctcgcccacccaggacgccatcatggccgacctcggcctcaccctctccgagttctct 60 ||||| ||||| |||||||||||||| || ||||| || ||| ||||||| ||||||||| Sbjct: 568 tcctcacccacgcaggacgccatcattgctgaccttggactctccctctctgagttctct 627
>dbj|AP006401.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT18E13, TM0283, complete sequence Length = 112721 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 333 tcagctctctgttacaatcggtatattgcttgc 365 |||||||||||||||||| || ||||||||||| Sbjct: 73295 tcagctctctgttacaattggaatattgcttgc 73327
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 233 tgctggaaggatttggggtcggtgtgatatcctacacggt 272 |||| ||||||||||| || ||||| |||||||||||||| Sbjct: 18532 tgcttgaaggatttggtgttggtgtcatatcctacacggt 18571
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Minus Query: 144 gtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 |||||||||||| || ||||| || || || ||||| |||||| | |||||||||||||| Sbjct: 67131 gtctctgatgattgctgcaattcccaatattattggatggctttcgatatcatttgcaaa 67072 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 280 tatatagcagaaattgctccacagaacatgagaggagc 317 |||||||| || || |||||||||| |||||||||||| Sbjct: 66818 tatatagctgagatcgctccacagaccatgagaggagc 66781
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 cgacctcggcctcaccctctcc 51 |||||||||||||||||||||| Sbjct: 569403 cgacctcggcctcaccctctcc 569382
>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11, complete sequence Length = 175925 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ttggttcagtcaatcagctct 340 ||||||||||||||||||||| Sbjct: 99121 ttggttcagtcaatcagctct 99141
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 tcgcccacccaggacgccatcatggccga 32 |||||||||||||| || ||||||||||| Sbjct: 3151387 tcgcccacccaggaagctatcatggccga 3151415
>emb|AL645726.22| Mouse DNA sequence from clone RP23-45M23 on chromosome 1, complete sequence Length = 231347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tccttggagaattctttctgt 407 ||||||||||||||||||||| Sbjct: 6007 tccttggagaattctttctgt 5987
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ttggcattttaccttgctcaa 430 ||||||||||||||||||||| Sbjct: 13281574 ttggcattttaccttgctcaa 13281554
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 gccgacctcggcctcaccctc 48 ||||||||||||||||||||| Sbjct: 1790256 gccgacctcggcctcaccctc 1790236
>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0622F08 Length = 140628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ttggcattttaccttgctcaa 430 ||||||||||||||||||||| Sbjct: 89501 ttggcattttaccttgctcaa 89481
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ttggcattttaccttgctcaa 430 ||||||||||||||||||||| Sbjct: 6825 ttggcattttaccttgctcaa 6805
>emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chromosome 4, complete sequence Length = 182774 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gcctcaccctctccgagttct 58 ||||||||||||||||||||| Sbjct: 144545 gcctcaccctctccgagttct 144525
>ref|NM_113166.1| Arabidopsis thaliana unknown protein AT3G22670 mRNA, complete cds Length = 1689 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gattcttcattcttgttcat 224 |||||||||||||||||||| Sbjct: 593 gattcttcattcttgttcat 574
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 catcatggccgacctcggcc 40 |||||||||||||||||||| Sbjct: 2295611 catcatggccgacctcggcc 2295630
>ref|XM_507586.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524F03.33 mRNA Length = 1259 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 428 ctcggcctcaccctctccga 447
>ref|XM_482612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 519 ctcggcctcaccctctccga 538
>ref|XM_507242.2| PREDICTED Oryza sativa (japonica cultivar-group), P0524F03.33 mRNA Length = 1222 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 539 ctcggcctcaccctctccga 558
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccatggtgggcgccattgcc 108 |||||||||||||||||||| Sbjct: 577895 ccatggtgggcgccattgcc 577876
>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence Length = 225868 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcaatcagctctctgttac 347 |||||||||||||||||||| Sbjct: 77024 gtcaatcagctctctgttac 77005
>emb|CR955008.2| Medicago truncatula chromosome 5 clone mte1-51b2, COMPLETE SEQUENCE Length = 110446 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 gttcttggcattttaccttg 425 |||||||||||||||||||| Sbjct: 42833 gttcttggcattttaccttg 42814
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcaatcagctctctgttac 347 |||||||||||||||||||| Sbjct: 87923 gtcaatcagctctctgttac 87942
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 caatatcatttgcaaatgat 207 |||||||||||||||||||| Sbjct: 2357070 caatatcatttgcaaatgat 2357051
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 cgccatcatggccgacctcggcct 41 |||| ||||||||||||||||||| Sbjct: 4222477 cgccgtcatggccgacctcggcct 4222454
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gggcgccattgccagtggcc 115 |||||||||||||||||||| Sbjct: 1937112 gggcgccattgccagtggcc 1937131
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gggcgccattgccagtggcc 115 |||||||||||||||||||| Sbjct: 1243921 gggcgccattgccagtggcc 1243902
>ref|XM_964229.1| PREDICTED: Tribolium castaneum similar to NTF2-related export protein (p15) (LOC657794), mRNA Length = 936 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 tctgctggaaggatttgggg 250 |||||||||||||||||||| Sbjct: 847 tctgctggaaggatttgggg 828
>ref|XM_792183.1| PREDICTED: Strongylocentrotus purpuratus similar to spindle pole body component 25 (LOC592672), mRNA Length = 804 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aattctttctgttcttggca 415 |||||||||||||||||||| Sbjct: 482 aattctttctgttcttggca 463
>gb|AY011007.1| Eremopyrum orientale clone 1a granule-bound starch synthase (GBSSI) gene, exons 9 through 14, partial cds Length = 1235 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tgatgatcgccgcaatcccg 168 |||||||||||||||||||| Sbjct: 323 tgatgatcgccgcaatcccg 342
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggtgggcgccattgccagtggcca 116 |||||||||||||| ||||||||| Sbjct: 39492 ggtgggcgccattgtcagtggcca 39515
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 caatatcatttgcaaatgat 207 |||||||||||||||||||| Sbjct: 2010718 caatatcatttgcaaatgat 2010737
>gb|AC093221.3| Homo sapiens chromosome 5 clone CTD-2181C22, complete sequence Length = 139833 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tgattcttcattcttgttca 223 |||||||||||||||||||| Sbjct: 80064 tgattcttcattcttgttca 80045
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 21412045 ctcggcctcaccctctccga 21412064
>gb|AC025814.7|AC025814 Arabidopsis thaliana chromosome 1 BAC F22H5 genomic sequence, complete sequence Length = 68041 Score = 40.1 bits (20), Expect = 6.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 144 gtctctgatgatcgccgcaatcccgaacatcattgggtggcttgcaatatcatttgcaaa 203 |||||| ||||| || ||||| || || |||||||| |||||| |||||||||||||| Sbjct: 34661 gtctcttatgattgctgcaattcccaatatcattggatggctttgcatatcatttgcaaa 34720
>gb|AC015974.10| Homo sapiens BAC clone RP11-467A18 from 2, complete sequence Length = 196544 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aatatcatttgcaaatgatt 208 |||||||||||||||||||| Sbjct: 117135 aatatcatttgcaaatgatt 117154
>gb|AC125499.3| Equus caballus clone CH241-369C8, complete sequence Length = 207304 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tatcatttgcaaatgattct 210 |||||||||||||||||||| Sbjct: 161165 tatcatttgcaaatgattct 161184
>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23 Length = 77273 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gattcttcattcttgttcat 224 |||||||||||||||||||| Sbjct: 8081 gattcttcattcttgttcat 8100
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 16040 ctcggcctcaccctctccga 16059
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 111970 ctcggcctcaccctctccga 111989
>dbj|AK109485.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H04, full insert sequence Length = 1198 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 518 ctcggcctcaccctctccga 537
>dbj|AK105990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G12, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 426 ctcggcctcaccctctccga 445
>dbj|AK103781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145G16, full insert sequence Length = 1224 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctcggcctcaccctctccga 53 |||||||||||||||||||| Sbjct: 541 ctcggcctcaccctctccga 560
>emb|AL929032.10| Zebrafish DNA sequence from clone DKEY-4C23 in linkage group 22, complete sequence Length = 236775 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 acacattaggcatgtttgtt 387 |||||||||||||||||||| Sbjct: 224731 acacattaggcatgtttgtt 224750
>gb|AC155882.2| Medicago truncatula chromosome 7 BAC clone mte1-6p16, complete sequence Length = 113536 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ccagtttatatagcagaaat 293 |||||||||||||||||||| Sbjct: 109278 ccagtttatatagcagaaat 109297
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tatcatttgcaaatgattct 210 |||||||||||||||||||| Sbjct: 451648 tatcatttgcaaatgattct 451667
>emb|AL845531.3| Mouse DNA sequence from clone RP23-232I4 on chromosome 2, complete sequence Length = 120366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tccttggagaattctttctg 406 |||||||||||||||||||| Sbjct: 113262 tccttggagaattctttctg 113281
>gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone mth2-29f3, complete sequence Length = 88313 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ccagtttatatagcagaaat 293 |||||||||||||||||||| Sbjct: 15785 ccagtttatatagcagaaat 15804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,061,700 Number of Sequences: 3902068 Number of extensions: 4061700 Number of successful extensions: 74587 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74129 Number of HSP's gapped (non-prelim): 452 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)