| Clone Name | bags33l17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC ... | 96 | 5e-20 | 2 | RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC ... | 94 | 3e-19 | 3 | RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC ... | 89 | 9e-18 | 4 | YR104_MIMIV (Q5UPI0) Putative transposase R104 | 30 | 6.3 | 5 | KPC1_CANAL (P43057) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1) | 29 | 8.2 |
|---|
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 96.3 bits (238), Expect = 5e-20 Identities = 44/59 (74%), Positives = 52/59 (88%) Frame = +1 Query: 25 YIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPELLSIKESLIKNVFKPNQKT 201 YI+P+F W NFNLEEQAKVIVAPRSNNE+D KL EFPE+LSIK+SLIK VF+PN++T Sbjct: 606 YIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 94.0 bits (232), Expect = 3e-19 Identities = 45/59 (76%), Positives = 49/59 (83%) Frame = +1 Query: 25 YIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPELLSIKESLIKNVFKPNQKT 201 YI+P F W NF LEEQAKVIVAPRSNNE+D KLK EFPELLSIKESLIK + PN+KT Sbjct: 611 YINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 89.0 bits (219), Expect = 9e-18 Identities = 41/59 (69%), Positives = 49/59 (83%) Frame = +1 Query: 25 YIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPELLSIKESLIKNVFKPNQKT 201 YI+P F W NF +EEQAKVIVA RSNNE+D KL EFPE+LSIKESL+K VF+PN++T Sbjct: 609 YIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667
>YR104_MIMIV (Q5UPI0) Putative transposase R104| Length = 545 Score = 29.6 bits (65), Expect = 6.3 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = +1 Query: 7 WRCTGXYIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPELLSIKESLIKNVFK 186 ++C YI N+ N + +Q K P+SNN T K +LL I++S K + Sbjct: 38 FKCDNKYITFNYYSNNVPINDQLKFKDIPQSNN---TDKKNKLMDKLLKIEDSRYKKDIE 94 Query: 187 PNQKTSK 207 N KT K Sbjct: 95 SN-KTRK 100
>KPC1_CANAL (P43057) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)| Length = 1097 Score = 29.3 bits (64), Expect = 8.2 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +1 Query: 379 IPCHYQIITQN-TTWCCYCIL*IRWEMDRVRNKVLCCIVLSH 501 IP ++ IT + T WCC+C + W VR K C V+ H Sbjct: 479 IPHRFEPITNHGTKWCCHCGYILPWGKKNVR-KCTECGVMCH 519 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,436,183 Number of Sequences: 219361 Number of extensions: 1842624 Number of successful extensions: 4016 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4016 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)