| Clone Name | bags33l04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY442329.1| Triticum aestivum phytochelatin synthetase mRNA, complete cds Length = 1571 Score = 307 bits (155), Expect = 2e-80 Identities = 350/415 (84%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgt 62 |||||||||| |||||||| |||| ||| || ||||||| |||||| |||||||||| | Sbjct: 235 gctgcgccgtgctgctcgcggcggtgctcttcttctccgcaccggccaccacagaggctt 294 Query: 63 acgattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactc 122 | |||||||| ||||| | || |||||||||||||||||||| ||||| |||||||||| Sbjct: 295 atgattcgctggatccaaatggcaacatcaccataaaatgggatattatttcgtggactc 354 Query: 123 ctgatggctatgttgcagctgtcacaatgtacaactaccagcagttccggcacatatcgg 182 ||||||| ||||||||| | |||||||||| |||||||||||||||||| |||||| | | Sbjct: 355 ctgatggttatgttgcaacagtcacaatgttcaactaccagcagttccgacacatacctg 414 Query: 183 cgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgg 242 | || ||||||||||||||||| ||||||| ||||| ||||| |||||||| ||||||| Sbjct: 415 cacctgggtggcagctggggtgttcgtgggcaaagaaagaggttatctggtcgatggtgg 474 Query: 243 gggctcagaccaccgagcagggtgactgctccaagtttaagaccaaccctccccattgct 302 |||||||| | || ||||||||||| ||||| || || |||| |||||||||||||| Sbjct: 475 gggctcaggctactgagcagggtgattgctcaaaattcaagagtgcccctccccattgct 534 Query: 303 gcaagagagatccgaccgtcatcgatcttctcccggggacaccgtacaaggaccaagtcg 362 ||||||||||||| || | |||||||||| ||||| || || | ||| | ||| | | Sbjct: 535 gcaagagagatccaacgattgtcgatcttcttccgggcaccccattcaaccagcaaattg 594 Query: 363 ccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgc 417 | || || ||||||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 595 ctaattgttgcaaggcaggagttatcaagacatttaaccaggacccaggaaatgc 649
>dbj|AK070472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D22, full insert sequence Length = 2028 Score = 250 bits (126), Expect = 3e-63 Identities = 345/418 (82%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgt 62 |||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||| | Sbjct: 309 gctgcgccgtgctgctcgcggcggcgctgctcttctccgcgccggccaccacagaggctt 368 Query: 63 acgattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactc 122 | ||| |||| ||||| | || |||||||| |||||||||||| |||| |||||||||| Sbjct: 369 atgatgcgctggatccaaatggaaacatcacgataaaatgggacgttatgtcgtggactc 428 Query: 123 ctgatggctatgttgcagctgtcacaatgtacaactaccagcagttccggcacatatcgg 182 |||||||||||||||| | ||||| |||| |||||| || || ||||||||||| || Sbjct: 429 ctgatggctatgttgctgtggtcacgatgttcaactatcaacaattccggcacatccagg 488 Query: 183 cgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgg 242 | || |||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| | Sbjct: 489 cacctgggtggcagctggggtggacatgggcaaagaaggaggtcatttggtcgatggttg 548 Query: 243 gggctcagaccaccgagcagggtgactgctccaagtttaagaccaaccctccccattgct 302 | || |||||||| |||||||| || ||||| ||||| ||| | | ||||| |||| Sbjct: 549 gagcacagaccactgagcagggcgattgctcaaagttcaagggtggcacgccccactgct 608 Query: 303 gcaagagagatccgaccgtcatcgatcttctcccggggacaccgtacaaggaccaagtcg 362 |||||| ||||| || || | ||||| || ||||| || || ||||| ||| ||| Sbjct: 609 gcaagaaggatcccacagttgttgatctgcttccgggcaccccatacaacatgcaaatcg 668 Query: 363 ccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 | || |||||||| | |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 669 ctaattgctgcaaagctggagttataaatacatttaaccaggacccatcaaatgctgc 726
>dbj|AK060897.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D01, full insert sequence Length = 1765 Score = 250 bits (126), Expect = 3e-63 Identities = 345/418 (82%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgt 62 |||||||||| |||||||| |||||||||||| |||||||||||||| |||||||||| | Sbjct: 232 gctgcgccgtgctgctcgcggcggcgctgctcttctccgcgccggccaccacagaggctt 291 Query: 63 acgattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactc 122 | ||| |||| ||||| | || |||||||| |||||||||||| |||| |||||||||| Sbjct: 292 atgatgcgctggatccaaatggaaacatcacgataaaatgggacgttatgtcgtggactc 351 Query: 123 ctgatggctatgttgcagctgtcacaatgtacaactaccagcagttccggcacatatcgg 182 |||||||||||||||| | ||||| |||| |||||| || || ||||||||||| || Sbjct: 352 ctgatggctatgttgctgtggtcacgatgttcaactatcaacaattccggcacatccagg 411 Query: 183 cgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgg 242 | || |||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| | Sbjct: 412 cacctgggtggcagctggggtggacatgggcaaagaaggaggtcatttggtcgatggttg 471 Query: 243 gggctcagaccaccgagcagggtgactgctccaagtttaagaccaaccctccccattgct 302 | || |||||||| |||||||| || ||||| ||||| ||| | | ||||| |||| Sbjct: 472 gagcacagaccactgagcagggcgattgctcaaagttcaagggtggcacgccccactgct 531 Query: 303 gcaagagagatccgaccgtcatcgatcttctcccggggacaccgtacaaggaccaagtcg 362 |||||| ||||| || || | ||||| || ||||| || || ||||| ||| ||| Sbjct: 532 gcaagaaggatcccacagttgttgatctgcttccgggcaccccatacaacatgcaaatcg 591 Query: 363 ccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 | || |||||||| | |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 592 ctaattgctgcaaagctggagttataaatacatttaaccaggacccatcaaatgctgc 649
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 218 bits (110), Expect = 1e-53 Identities = 236/278 (84%) Strand = Plus / Plus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 |||||||| | |||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 2440 gtcacaatattcaactaccagcagttccgacacatatccgcgcctgggtggcagctgggg 2499 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||| ||||||| ||||| |||||||||||||| || | ||| |||| | |||| |||||| Sbjct: 2500 tggtcgtgggcaaagaaagaggtcatctggtcgatagcgggtgctctggccactgagcag 2559 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatccgaccgtc 322 ||||| ||||| || || |||| | |||||||||||||||||||||||||||||| | Sbjct: 2560 ggtgattgctcaaaattcaagagcgcccctccccattgctgcaagagagatccgacgatt 2619 Query: 323 atcgatcttctcccggggacaccgtacaaggaccaagtcgccaactgctgcaagggagga 382 |||||||||| || || || || | ||| | ||| | |||||||| ||||||| |||| Sbjct: 2620 gtcgatcttcttccaggcaccccattcaaccagcaaattgccaactgttgcaaggcagga 2679 Query: 383 gttataagtacatttaaccaggacccaggaaatgctgc 420 ||||||| ||||||||||||||||| ||||||||||| Sbjct: 2680 gttataaagacatttaaccaggacccgggaaatgctgc 2717 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 86 aacatcaccataaaatgggacattatatcgtggactcctgatggctatgttg 137 |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 2064 aacatcaccataaaatgggatattatttcgtggactcctgatggctatgttg 2115
>ref|XM_469799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 210 bits (106), Expect = 3e-51 Identities = 253/302 (83%) Strand = Plus / Plus Query: 14 ctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgtacgattcgcta 73 ||||||| |||||||||||||||||||||||| ||||||||| || || |||||||| Sbjct: 371 ctgctcgtggcggcgctgctcctctccgcgccgagcgccacagaagcttatgattcgctg 430 Query: 74 gatccgaccgggaacatcaccataaaatgggacattatatcgtggactcctgatggctat 133 ||||| | ||||||||||| |||||||||||| |||| |||||||||||||| || Sbjct: 431 gatccaaatgggaacatcacaataaaatgggacgttatgcaatggactcctgatggttac 490 Query: 134 gttgcagctgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtgg 193 ||||| | |||||||||| ||| || || || || |||||||| ||| || |||||| Sbjct: 491 gttgctgtagtcacaatgttcaattatcaacaatttcggcacatccaggcacctgggtgg 550 Query: 194 cagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagacc 253 |||||||||||||| ||||| |||||||||||||| ||||| ||||| || || |||||| Sbjct: 551 cagctggggtggacatgggcgaagaaggaggtcatttggtcgatggttggagcacagacc 610 Query: 254 accgagcagggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagat 313 || ||||||||||| ||||| ||||| ||| |||||| ||||| |||||||||| |||| Sbjct: 611 actgagcagggtgattgctcaaagttcaagggcaacccaccccactgctgcaagaaagat 670 Query: 314 cc 315 || Sbjct: 671 cc 672 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 719 gccaattgctgcaaagcaggagttataaatacatttaaccaggacccattaaatgctgc 777
>dbj|AK102170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086I06, full insert sequence Length = 2117 Score = 202 bits (102), Expect = 7e-49 Identities = 252/302 (83%) Strand = Plus / Plus Query: 14 ctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgtacgattcgcta 73 ||||||| |||||||||||||||||||||||| ||||||||| || || |||||||| Sbjct: 427 ctgctcgtggcggcgctgctcctctccgcgccgagcgccacagaagcttatgattcgctg 486 Query: 74 gatccgaccgggaacatcaccataaaatgggacattatatcgtggactcctgatggctat 133 ||||| | ||||||||||| |||||||||||| |||| |||||||||||||| || Sbjct: 487 gatccaaatgggaacatcacaataaaatgggacgttatgcaatggactcctgatggttac 546 Query: 134 gttgcagctgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtgg 193 ||||| | ||||| |||| ||| || || || || |||||||| ||| || |||||| Sbjct: 547 gttgctgtagtcacgatgttcaattatcaacaatttcggcacatccaggcacctgggtgg 606 Query: 194 cagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagacc 253 |||||||||||||| ||||| |||||||||||||| ||||| ||||| || || |||||| Sbjct: 607 cagctggggtggacatgggcgaagaaggaggtcatttggtcgatggttggagcacagacc 666 Query: 254 accgagcagggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagat 313 || ||||||||||| ||||| ||||| ||| |||||| ||||| |||||||||| |||| Sbjct: 667 actgagcagggtgattgctcaaagttcaagggcaacccaccccactgctgcaagaaagat 726 Query: 314 cc 315 || Sbjct: 727 cc 728 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 775 gccaattgctgcaaagcaggagttataaatacatttaaccaggacccattaaatgctgc 833
>ref|NM_197178.1| Oryza sativa (japonica cultivar-group) putative phytochelatin synthetase (OSJNBa0017E08.5), mRNA Length = 1278 Score = 153 bits (77), Expect = 5e-34 Identities = 224/273 (82%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgt 62 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| | || | Sbjct: 23 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccacatatgctt 82 Query: 63 acgattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactc 122 | ||||| || ||||| | ||| |||||||| ||||||||||| | || ||||||| Sbjct: 83 atgattccctggatccaaacggcaacatcacgataaaatgggatgtgatgcaatggactc 142 Query: 123 ctgatggctatgttgcagctgtcacaatgtacaactaccagcagttccggcacatatcgg 182 |||||||||||| ||| | ||||||| ||| |||||||||||| ||||||||||| | Sbjct: 143 ctgatggctatgctgccgttgtcacactgtccaactaccagcaattccggcacatccagc 202 Query: 183 cgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgg 242 | || |||||||||||||||||||| ||| |||||||||| |||||||||||| | Sbjct: 203 caccggggtggcagctggggtggacatggcagcagaaggaggtgatctggtccatgtacg 262 Query: 243 gggctcagaccaccgagcagggtgactgctcca 275 | || ||| ||| ||||||||| |||||||||| Sbjct: 263 gcgcgcaggccatcgagcagggcgactgctcca 295
>dbj|AK102632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099L21, full insert sequence Length = 894 Score = 153 bits (77), Expect = 5e-34 Identities = 224/273 (82%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgt 62 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| | || | Sbjct: 89 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccacatatgctt 148 Query: 63 acgattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactc 122 | ||||| || ||||| | ||| |||||||| ||||||||||| | || ||||||| Sbjct: 149 atgattccctggatccaaacggcaacatcacgataaaatgggatgtgatgcaatggactc 208 Query: 123 ctgatggctatgttgcagctgtcacaatgtacaactaccagcagttccggcacatatcgg 182 |||||||||||| ||| | ||||||| ||| |||||||||||| ||||||||||| | Sbjct: 209 ctgatggctatgctgccgttgtcacactgtccaactaccagcaattccggcacatccagc 268 Query: 183 cgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgg 242 | || |||||||||||||||||||| ||| |||||||||| |||||||||||| | Sbjct: 269 caccggggtggcagctggggtggacatggcagcagaaggaggtgatctggtccatgtacg 328 Query: 243 gggctcagaccaccgagcagggtgactgctcca 275 | || ||| ||| ||||||||| |||||||||| Sbjct: 329 gcgcgcaggccatcgagcagggcgactgctcca 361
>dbj|AK071225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087K13, full insert sequence Length = 1574 Score = 153 bits (77), Expect = 5e-34 Identities = 224/273 (82%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacagaggcgt 62 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| | || | Sbjct: 93 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccacatatgctt 152 Query: 63 acgattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactc 122 | ||||| || ||||| | ||| |||||||| ||||||||||| | || ||||||| Sbjct: 153 atgattccctggatccaaacggcaacatcacgataaaatgggatgtgatgcaatggactc 212 Query: 123 ctgatggctatgttgcagctgtcacaatgtacaactaccagcagttccggcacatatcgg 182 |||||||||||| ||| | ||||||| ||| |||||||||||| ||||||||||| | Sbjct: 213 ctgatggctatgctgccgttgtcacactgtccaactaccagcaattccggcacatccagc 272 Query: 183 cgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgg 242 | || |||||||||||||||||||| ||| |||||||||| |||||||||||| | Sbjct: 273 caccggggtggcagctggggtggacatggcagcagaaggaggtgatctggtccatgtacg 332 Query: 243 gggctcagaccaccgagcagggtgactgctcca 275 | || ||| ||| ||||||||| |||||||||| Sbjct: 333 gcgcgcaggccatcgagcagggcgactgctcca 365
>gb|AY328910.1| Oryza sativa (indica cultivar-group) BRITTLE CULM1 (BC1) gene, complete cds Length = 2547 Score = 133 bits (67), Expect = 5e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 181 ggcgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggt 240 ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| || Sbjct: 1018 ggcgcccgggtggacggtggggtggtcgtgggccaagaaggaggtcatctggtccatcgt 1077 Query: 241 gggggctcagaccaccgagcagggtgactgctccaagtt 279 |||||| ||| ||||||||||||| |||||||||||||| Sbjct: 1078 gggggcccaggccaccgagcagggcgactgctccaagtt 1116
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 8e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 |||||||||| ||| || || || || |||||||| ||| || ||||||||||||||| Sbjct: 30821683 gtcacaatgttcaattatcaacaatttcggcacatccaggcacctgggtggcagctgggg 30821624 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 30821623 tggacatgggcgaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 30821564 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatcc 315 ||||| ||||| ||||| ||| |||||| ||||| |||||||||| |||||| Sbjct: 30821563 ggtgattgctcaaagttcaagggcaacccaccccactgctgcaagaaagatcc 30821511 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 17073031 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 17073089 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 17073090 tgggggcccaggccaccgagcagggcgactgctccaagtt 17073129 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 30821464 gccaattgctgcaaagcaggagttataaatacatttaaccaggacccattaaatgctgc 30821406 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 14 ctgctcgccgcggcgctgctcctctccgcgccggccgccacag 56 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 30822675 ctgctcgtggcggcgctgctcctctccgcgccgagcgccacag 30822633 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 65 gattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactcct 124 |||||||| ||||| | ||||||||||| |||||||||||| |||| ||||||||| Sbjct: 30822003 gattcgctggatccaaatgggaacatcacaataaaatgggacgttatgcaatggactcct 30821944 Query: 125 gatgg 129 ||||| Sbjct: 30821943 gatgg 30821939
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 129 bits (65), Expect = 8e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 |||||||||| ||| || || || || |||||||| ||| || ||||||||||||||| Sbjct: 121407 gtcacaatgttcaattatcaacaatttcggcacatccaggcacctgggtggcagctgggg 121466 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 121467 tggacatgggcgaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 121526 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatcc 315 ||||| ||||| ||||| ||| |||||| ||||| |||||||||| |||||| Sbjct: 121527 ggtgattgctcaaagttcaagggcaacccaccccactgctgcaagaaagatcc 121579 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 121626 gccaattgctgcaaagcaggagttataaatacatttaaccaggacccattaaatgctgc 121684 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 14 ctgctcgccgcggcgctgctcctctccgcgccggccgccacag 56 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 120415 ctgctcgtggcggcgctgctcctctccgcgccgagcgccacag 120457 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 65 gattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactcct 124 |||||||| ||||| | ||||||||||| |||||||||||| |||| ||||||||| Sbjct: 121087 gattcgctggatccaaatgggaacatcacaataaaatgggacgttatgcaatggactcct 121146 Query: 125 gatgg 129 ||||| Sbjct: 121147 gatgg 121151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 8e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 |||||||||| ||| || || || || |||||||| ||| || ||||||||||||||| Sbjct: 30912206 gtcacaatgttcaattatcaacaatttcggcacatccaggcacctgggtggcagctgggg 30912147 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 30912146 tggacatgggcgaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 30912087 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatcc 315 ||||| ||||| ||||| ||| |||||| ||||| |||||||||| |||||| Sbjct: 30912086 ggtgattgctcaaagttcaagggcaacccaccccactgctgcaagaaagatcc 30912034 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 17066600 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 17066658 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 17066659 tgggggcccaggccaccgagcagggcgactgctccaagtt 17066698 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 30911987 gccaattgctgcaaagcaggagttataaatacatttaaccaggacccattaaatgctgc 30911929 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 14 ctgctcgccgcggcgctgctcctctccgcgccggccgccacag 56 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 30913198 ctgctcgtggcggcgctgctcctctccgcgccgagcgccacag 30913156 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 65 gattcgctagatccgaccgggaacatcaccataaaatgggacattatatcgtggactcct 124 |||||||| ||||| | ||||||||||| |||||||||||| |||| ||||||||| Sbjct: 30912526 gattcgctggatccaaatgggaacatcacaataaaatgggacgttatgcaatggactcct 30912467 Query: 125 gatgg 129 ||||| Sbjct: 30912466 gatgg 30912462
>ref|XM_468693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1836 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 286 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 344 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 345 tgggggcccaggccaccgagcagggcgactgctccaagtt 384
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 103777 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 103835 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 103836 tgggggcccaggccaccgagcagggcgactgctccaagtt 103875
>gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CULM1 (BC1) gene, complete cds Length = 4498 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 2602 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 2660 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 2661 tgggggcccaggccaccgagcagggcgactgctccaagtt 2700
>dbj|AK105862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A03, full insert sequence Length = 1715 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 250 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 308 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 309 tgggggcccaggccaccgagcagggcgactgctccaagtt 348
>dbj|AK069631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025J18, full insert sequence Length = 1836 Score = 127 bits (64), Expect = 3e-26 Identities = 93/100 (93%), Gaps = 2/100 (2%) Strand = Plus / Plus Query: 181 ggcgcccgggtgg-cagctggggtggacgtgggccaagaaggaggtcatctggtccatgg 239 ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 286 ggcgcccgggtggacag-tggggtggtcgtgggccaagaaggaggtcatctggtccatcg 344 Query: 240 tgggggctcagaccaccgagcagggtgactgctccaagtt 279 ||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 345 tgggggcccaggccaccgagcagggcgactgctccaagtt 384
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin synthetase-like protein 2, and cytochrome b5 (Cyb5) genes, complete cds; and MADS box protein AGLG1 (Aglg1) gene, partial cds Length = 23102 Score = 121 bits (61), Expect = 2e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 191 tggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcag 250 |||||||| |||||||| ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct: 10037 tggcagcttgggtggacatgggcaaagaaggaggttatatggtcaatggttggggctcag 10096 Query: 251 accaccgagcagggtgactgctccaagtttaagaccaaccctccccattgctgcaagaga 310 ||||| || |||||||||||||| ||||| ||| |||| | |||||||||||||||| | Sbjct: 10097 accactgaacagggtgactgctcaaagttcaagggcaacaccccccattgctgcaagaaa 10156 Query: 311 gatcc 315 ||||| Sbjct: 10157 gatcc 10161 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 142 tgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctggg 201 ||||||||||||||| ||||| || || |||||||| | | ||||| |||||||| || Sbjct: 3406 tgtcacaatgtacaattaccaacaatttcggcacattgggccacccggatggcagcttgg 3465 Query: 202 gtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagca 261 |||||| ||||| ||||||||||| || ||||| ||||| ||||||||| ||||||| || Sbjct: 3466 gtggacatgggcaaagaaggaggttatatggtcaatggttggggctcaggccaccgaaca 3525 Query: 262 gggtgactgctccaagtt 279 |||||||||||| ||||| Sbjct: 3526 gggtgactgctcaaagtt 3543 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||||| |||||| |||| ||| |||||||||||||||| ||||||||| Sbjct: 10208 gccaattgctgcaaggcaggagtcataaatacctttaaccaggacccagcaaatgctgc 10266 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 54 cagaggcgtacgattcgctagatccgaccgggaacatcaccataaaatgggacattatat 113 ||||||| || |||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 9668 cagaggcttatgattcgctggatccaaccggcaacatcactataaaatgggatattatgc 9727 Query: 114 cgtggactcctgatggctatgt 135 |||||||||||| || ||||| Sbjct: 9728 agtggactcctgacggatatgt 9749 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||||| |||||||||||||||| ||| ||||| |||| ||||||||| Sbjct: 3626 gccaattgctgcaaggcaggagttataagtacaattagtcaggatccagcaaatgctgc 3684 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 54 cagaggcgtacgattcgctagatccgaccgggaacatcaccataaaatgggacattatat 113 ||||||| || ||||| |||||||| | ||| |||||||| ||||||||||| |||| Sbjct: 3141 cagaggcttatgattctctagatccaaacggcaacatcactataaaatgggatgttatgc 3200 Query: 114 cgtggactcctgatggctatgt 135 |||||||||||||| ||||| Sbjct: 3201 aatggactcctgatggatatgt 3222 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 7 cgccgttctgctcgccgcggcgctgctcctctccgc 42 |||||| |||||||| || ||||||||||||||||| Sbjct: 9035 cgccgtgctgctcgcggccgcgctgctcctctccgc 9070
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 115 bits (58), Expect = 1e-22 Identities = 223/278 (80%) Strand = Plus / Minus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 ||||| |||| |||||| || || ||||||||||| ||| || ||||||||||||||| Sbjct: 52367 gtcacgatgttcaactatcaacaattccggcacatccaggcacctgggtggcagctgggg 52308 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 52307 tggacatgggcaaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 52248 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatccgaccgtc 322 || || ||||| ||||| ||| | | ||||| |||||||||| ||||| || || Sbjct: 52247 ggcgattgctcaaagttcaagggtggcacgccccactgctgcaagaaggatcccacagtt 52188 Query: 323 atcgatcttctcccggggacaccgtacaaggaccaagtcgccaactgctgcaagggagga 382 | ||||| || ||||| || || ||||| ||| |||| || |||||||| | ||| Sbjct: 52187 gttgatctgcttccgggcaccccatacaacatgcaaatcgctaattgctgcaaagctgga 52128 Query: 383 gttataagtacatttaaccaggacccaggaaatgctgc 420 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 52127 gttataaatacatttaaccaggacccatcaaatgctgc 52090 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 86 aacatcaccataaaatgggacattatatcgtggactcctgatggctatgttg 137 |||||||| |||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 52708 aacatcacgataaaatgggacgttatgtcgtggactcctgatggctatgttg 52657 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacag 56 |||||||||| |||||||| |||||||||||| |||||||||||||| |||||| Sbjct: 53376 gctgcgccgtgctgctcgcggcggcgctgctcttctccgcgccggccaccacag 53323
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 1e-22 Identities = 223/278 (80%) Strand = Plus / Minus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 ||||| |||| |||||| || || ||||||||||| ||| || ||||||||||||||| Sbjct: 18579252 gtcacgatgttcaactatcaacaattccggcacatccaggcacctgggtggcagctgggg 18579193 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 18579192 tggacatgggcaaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 18579133 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatccgaccgtc 322 || || ||||| ||||| ||| | | ||||| |||||||||| ||||| || || Sbjct: 18579132 ggcgattgctcaaagttcaagggtggcacgccccactgctgcaagaaggatcccacagtt 18579073 Query: 323 atcgatcttctcccggggacaccgtacaaggaccaagtcgccaactgctgcaagggagga 382 | ||||| || ||||| || || ||||| ||| |||| || |||||||| | ||| Sbjct: 18579072 gttgatctgcttccgggcaccccatacaacatgcaaatcgctaattgctgcaaagctgga 18579013 Query: 383 gttataagtacatttaaccaggacccaggaaatgctgc 420 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 18579012 gttataaatacatttaaccaggacccatcaaatgctgc 18578975 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 86 aacatcaccataaaatgggacattatatcgtggactcctgatggctatgttg 137 |||||||| |||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 18579593 aacatcacgataaaatgggacgttatgtcgtggactcctgatggctatgttg 18579542 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccacag 56 |||||||||| |||||||| |||||||||||| |||||||||||||| |||||| Sbjct: 18580261 gctgcgccgtgctgctcgcggcggcgctgctcttctccgcgccggccaccacag 18580208
>dbj|AK065501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026K11, full insert sequence Length = 3797 Score = 115 bits (58), Expect = 1e-22 Identities = 223/278 (80%) Strand = Plus / Minus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 ||||| |||| |||||| || || ||||||||||| ||| || ||||||||||||||| Sbjct: 3053 gtcacgatgttcaactatcaacaattccggcacatccaggcacctgggtggcagctgggg 2994 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 2993 tggacatgggcaaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 2934 Query: 263 ggtgactgctccaagtttaagaccaaccctccccattgctgcaagagagatccgaccgtc 322 || || ||||| ||||| ||| | | ||||| |||||||||| ||||| || || Sbjct: 2933 ggcgattgctcaaagttcaagggtggcacgccccactgctgcaagaaggatcccacagtt 2874 Query: 323 atcgatcttctcccggggacaccgtacaaggaccaagtcgccaactgctgcaagggagga 382 | ||||| || ||||| || || ||||| ||| |||| || |||||||| | ||| Sbjct: 2873 gttgatctgcttccgggcaccccatacaacatgcaaatcgctaattgctgcaaagctgga 2814 Query: 383 gttataagtacatttaaccaggacccaggaaatgctgc 420 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 2813 gttataaatacatttaaccaggacccatcaaatgctgc 2776 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Minus Query: 86 aacatcaccataaaatgggacattatatcgtggactcctgatggctatgttg 137 |||||||| |||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 3394 aacatcacgataaaatgggacgttatgtcgtggactcctgatggctatgttg 3343
>dbj|AK067864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126A02, full insert sequence Length = 2221 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 143 gtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctgggg 202 ||||| |||| |||||| || || ||||||||||| ||| || ||||||||||||||| Sbjct: 2003 gtcacgatgttcaactatcaacaattccggcacatccaggcacctgggtggcagctgggg 1944 Query: 203 tggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcag 262 ||||| ||||| |||||||||||||| ||||| ||||| || || |||||||| |||||| Sbjct: 1943 tggacatgggcaaagaaggaggtcatttggtcgatggttggagcacagaccactgagcag 1884 Query: 263 ggtgactgctccaagtt 279 || || ||||| ||||| Sbjct: 1883 ggcgattgctcaaagtt 1867 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 380 ggagttataagtacatttaaccaggacccaggaaatgctgc 420 |||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1766 ggagttataaatacatttaaccaggacccatcaaatgctgc 1726
>gb|AF160475.1|AF160475 Zea mays phytochelatin synthetase-like protein (CISEZmG) mRNA, complete cds Length = 1407 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 220 ggaggtcatctggtccatggtgggggctcagaccaccgagcagggtgactgctccaagtt 279 |||||| || ||||| ||||| |||||||||||||| || ||||| |||||||| ||||| Sbjct: 2 ggaggttatatggtcaatggttggggctcagaccactgaacagggcgactgctcaaagtt 61 Query: 280 taagaccaaccctccccattgctgcaagagagatcc 315 |||| || ||| |||||||||||||||| |||||| Sbjct: 62 caagagcagcccaccccattgctgcaagaaagatcc 97 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||||| ||||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 144 gccaattgctgcaaggcaggagttgtaaatacctttaaccaggacccagcaaatgctgc 202
>gb|AY109348.1| Zea mays CL1296_1 mRNA sequence Length = 2139 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 220 ggaggtcatctggtccatggtgggggctcagaccaccgagcagggtgactgctccaagtt 279 |||||| || ||||| ||||| |||||||||||||| || ||||| |||||||| ||||| Sbjct: 2 ggaggttatatggtcaatggttggggctcagaccactgaacagggcgactgctcaaagtt 61 Query: 280 taagaccaaccctccccattgctgcaagagagatcc 315 |||| || ||| |||||||||||||||| |||||| Sbjct: 62 caagagcagcccaccccattgctgcaagaaagatcc 97 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagttataagtacatttaaccaggacccaggaaatgctgc 420 ||||| |||||||||| ||||||| ||| ||| |||||||||||||||| ||||||||| Sbjct: 144 gccaattgctgcaaggcaggagttgtaaatacctttaaccaggacccagcaaatgctgc 202
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 142 tgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctggg 201 ||||||| ||| |||||||||||| ||||||||||| | | || |||||||||||||| Sbjct: 45659 tgtcacactgtccaactaccagcaattccggcacatccagccaccggggtggcagctggg 45600 Query: 202 gtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagca 261 |||||| ||| |||||||||| |||||||||||| || || ||| ||| |||||| Sbjct: 45599 gtggacatggcagcagaaggaggtgatctggtccatgtacggcgcgcaggccatcgagca 45540 Query: 262 gggtgactgctcca 275 ||| |||||||||| Sbjct: 45539 gggcgactgctcca 45526 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccaca 55 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| Sbjct: 46576 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccaca 46524
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 142 tgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctggg 201 ||||||| ||| |||||||||||| ||||||||||| | | || |||||||||||||| Sbjct: 18461034 tgtcacactgtccaactaccagcaattccggcacatccagccaccggggtggcagctggg 18461093 Query: 202 gtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagca 261 |||||| ||| |||||||||| |||||||||||| || || ||| ||| |||||| Sbjct: 18461094 gtggacatggcagcagaaggaggtgatctggtccatgtacggcgcgcaggccatcgagca 18461153 Query: 262 gggtgactgctcca 275 ||| |||||||||| Sbjct: 18461154 gggcgactgctcca 18461167 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccaca 55 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| Sbjct: 18460117 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccaca 18460169
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer, PPR794, PPR683, PPR762 genes for hypothetical protein, complete cds Length = 76363 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 142 tgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctggg 201 ||||||| ||| |||||||||||| ||||||||||| | | || |||||||||||||| Sbjct: 76063 tgtcacactgtccaactaccagcaattccggcacatccagccaccggggtggcagctggg 76122 Query: 202 gtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagca 261 |||||| ||| |||||||||| |||||||||||| || || ||| ||| |||||| Sbjct: 76123 gtggacatggcagcagaaggaggtgatctggtccatgtacggcgcgcaggccatcgagca 76182 Query: 262 gggtgactgctcca 275 ||| |||||||||| Sbjct: 76183 gggcgactgctcca 76196 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccaca 55 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| Sbjct: 75164 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccaca 75216
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 4e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 142 tgtcacaatgtacaactaccagcagttccggcacatatcggcgcccgggtggcagctggg 201 ||||||| ||| |||||||||||| ||||||||||| | | || |||||||||||||| Sbjct: 18471087 tgtcacactgtccaactaccagcaattccggcacatccagccaccggggtggcagctggg 18471146 Query: 202 gtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagca 261 |||||| ||| |||||||||| |||||||||||| || || ||| ||| |||||| Sbjct: 18471147 gtggacatggcagcagaaggaggtgatctggtccatgtacggcgcgcaggccatcgagca 18471206 Query: 262 gggtgactgctcca 275 ||| |||||||||| Sbjct: 18471207 gggcgactgctcca 18471220 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 3 gctgcgccgttctgctcgccgcggcgctgctcctctccgcgccggccgccaca 55 |||||||||| |||||||| |||||||||||| ||||| | |||||| ||||| Sbjct: 18470170 gctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccaca 18470222
>ref|XM_479085.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1356 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 181 ggcgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggt 240 |||||| |||||| | |||||||||||||||| | ||||||| |||||||||||||| Sbjct: 183 ggcgccggggtggacggtggggtggacgtgggcgcggcaggaggtgatctggtccatggt 242 Query: 241 gggggctcagaccaccgagcagggtgactgctcc 274 ||| || ||| |||| || ||||| ||||||||| Sbjct: 243 gggcgcgcaggccacggaccagggcgactgctcc 276
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 198 tggggtggacgtgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccg 257 |||||||||| ||||| ||||| || || ||||||||||||||||| || || || || | Sbjct: 482 tggggtggacatgggcaaagaaagaagtgatctggtccatggtgggtgcacaaacaactg 541 Query: 258 agcagggtgactgctccaagtt 279 | |||||||||||||| ||||| Sbjct: 542 aacagggtgactgctcaaagtt 563
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 181 ggcgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggt 240 |||||| |||||| | |||||||||||||||| | ||||||| |||||||||||||| Sbjct: 24703866 ggcgccggggtggacggtggggtggacgtgggcgcggcaggaggtgatctggtccatggt 24703807 Query: 241 gggggctcagaccaccgagcagggtgactgctcc 274 ||| || ||| |||| || ||||| ||||||||| Sbjct: 24703806 gggcgcgcaggccacggaccagggcgactgctcc 24703773 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagt 384 ||||||||||||||||||||||| Sbjct: 24700252 gccaactgctgcaagggaggagt 24700274
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 181 ggcgcccgggtggcagctggggtggacgtgggccaagaaggaggtcatctggtccatggt 240 |||||| |||||| | |||||||||||||||| | ||||||| |||||||||||||| Sbjct: 59803 ggcgccggggtggacggtggggtggacgtgggcgcggcaggaggtgatctggtccatggt 59744 Query: 241 gggggctcagaccaccgagcagggtgactgctcc 274 ||| || ||| |||| || ||||| ||||||||| Sbjct: 59743 gggcgcgcaggccacggaccagggcgactgctcc 59710 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagt 384 ||||||||||||||||||||||| Sbjct: 56189 gccaactgctgcaagggaggagt 56211
>gb|AY341443.1| Phaseolus vulgaris cultivar Sprite BAC 78L17, partial sequence Length = 106592 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 209 tgggccaagaaggaggtcatctggtccatggtgggggctcagaccaccgagcagggtgac 268 ||||| |||||||| || || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 43429 tgggcaaagaaggaagtaatatggtccatggtaggagctcaaaccacagagcaaggagac 43370 Query: 269 tgctccaagtt 279 ||||| ||||| Sbjct: 43369 tgctctaagtt 43359
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 14 ctgctcgccgcggcgctgctcctctccgcgccggccgccacag 56 ||||||| |||||||||||||||||||||||| |||||||| Sbjct: 664 ctgctcgtggcggcgctgctcctctccgcgccgagcgccacag 622
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 83 gggaacatcaccataaaatgggacattatatcgtggactcctgatggctatgt 135 |||||||||||||| ||||||||||| || | |||||| | ||||||||||| Sbjct: 13964 gggaacatcaccatcaaatgggacatcatgacctggactgcagatggctatgt 13912
>gb|BT013422.1| Lycopersicon esculentum clone 132061R, mRNA sequence Length = 1858 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 292 tccccattgctgcaagagagatccgaccgtcatcgat 328 |||||||||||||||||| ||||| |||||| ||||| Sbjct: 402 tccccattgctgcaagagggatccaaccgtcgtcgat 438
>ref|NM_125485.2| Arabidopsis thaliana COB (COBRA) AT5G60920 (COB) mRNA, complete cds Length = 1837 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 tggactcctgatggctatgttgc 138 ||||||||||||||||||||||| Sbjct: 359 tggactcctgatggctatgttgc 381
>ref|XM_479084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1682 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagt 384 ||||||||||||||||||||||| Sbjct: 529 gccaactgctgcaagggaggagt 551
>gb|AY094402.1| Arabidopsis thaliana AT5g60920/MSL3_40 mRNA, complete cds Length = 1676 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 tggactcctgatggctatgttgc 138 ||||||||||||||||||||||| Sbjct: 270 tggactcctgatggctatgttgc 292
>emb|BX830769.1|CNS0A0N0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1682 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 tggactcctgatggctatgttgc 138 ||||||||||||||||||||||| Sbjct: 333 tggactcctgatggctatgttgc 355
>gb|AY085712.1| Arabidopsis thaliana clone 17250 mRNA, complete sequence Length = 1715 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 tggactcctgatggctatgttgc 138 ||||||||||||||||||||||| Sbjct: 360 tggactcctgatggctatgttgc 382
>dbj|AK121884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104P13, full insert sequence Length = 1709 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagt 384 ||||||||||||||||||||||| Sbjct: 534 gccaactgctgcaagggaggagt 556
>dbj|AK101860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070A18, full insert sequence Length = 1682 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 gccaactgctgcaagggaggagt 384 ||||||||||||||||||||||| Sbjct: 529 gccaactgctgcaagggaggagt 551
>gb|BT001119.1| Arabidopsis thaliana At5g60920/MSL3_40 mRNA, complete cds Length = 1371 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 116 tggactcctgatggctatgttgc 138 ||||||||||||||||||||||| Sbjct: 163 tggactcctgatggctatgttgc 185
>gb|AF319663.1|AF319663 Arabidopsis thaliana putative glycosylphosphatidylinositol-anchored protein (COB) gene, complete cds Length = 2736 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 tggactcctgatggctatgttg 137 |||||||||||||||||||||| Sbjct: 943 tggactcctgatggctatgttg 964
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cgccgttctgctcgccgcggcg 28 |||||||||||||||||||||| Sbjct: 1998533 cgccgttctgctcgccgcggcg 1998554
>dbj|AB008269.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSL3 Length = 61634 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 tggactcctgatggctatgttg 137 |||||||||||||||||||||| Sbjct: 23696 tggactcctgatggctatgttg 23675
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctcctctccgcgccggccgcc 52 ||||||||||||||||||||| Sbjct: 31024388 ctcctctccgcgccggccgcc 31024368
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 ctcctctccgcgccggccgcc 52 ||||||||||||||||||||| Sbjct: 81367 ctcctctccgcgccggccgcc 81347
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ctgctcgccgcggcgctgctc 34 ||||||||||||||||||||| Sbjct: 3670092 ctgctcgccgcggcgctgctc 3670072
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctgctcgccgcggcgctgct 33 |||||||||||||||||||| Sbjct: 1473476 ctgctcgccgcggcgctgct 1473457
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 caccgagcagggtgactgct 272 |||||||||||||||||||| Sbjct: 182046 caccgagcagggtgactgct 182027
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctgctcgccgcggcgctgct 33 |||||||||||||||||||| Sbjct: 2703972 ctgctcgccgcggcgctgct 2703953
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tgcagctgtcacaatgtaca 155 |||||||||||||||||||| Sbjct: 114969 tgcagctgtcacaatgtaca 114950
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctgctcgccgcggcgctgct 33 |||||||||||||||||||| Sbjct: 3155589 ctgctcgccgcggcgctgct 3155608
>gb|AC112162.8| Mus Musculus chromosome 9 BAC clone MGS1-296M6 ES cell line, complete sequence Length = 116580 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tgcagctgtcacaatgtaca 155 |||||||||||||||||||| Sbjct: 88750 tgcagctgtcacaatgtaca 88731
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctgctcgccgcggcgctgct 33 |||||||||||||||||||| Sbjct: 1679480 ctgctcgccgcggcgctgct 1679499
>emb|CR536618.8| Mouse DNA sequence from clone RP24-143B12 on chromosome X, complete sequence Length = 15529 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tttaaccaggacccaggaaa 414 |||||||||||||||||||| Sbjct: 13609 tttaaccaggacccaggaaa 13628
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctcgccgcggcgctgctc 34 |||||||||||||||||||| Sbjct: 4581228 tgctcgccgcggcgctgctc 4581247 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tgctcgccgcggcgctgctc 34 |||||||||||||||||||| Sbjct: 3688386 tgctcgccgcggcgctgctc 3688367
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 aagaaggaggtcatctggtc 234 |||||||||||||||||||| Sbjct: 5541309 aagaaggaggtcatctggtc 5541328
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 17 ctcgccgcggcgctgctcctctccgcgc 44 ||||||||||||||||| ||| |||||| Sbjct: 15281361 ctcgccgcggcgctgctgctccccgcgc 15281334
>gb|AC017111.4|AC017111 Homo sapiens BAC clone RP11-571G1 from 13, complete sequence Length = 193787 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 aggacccaggaaatgctgcc 421 |||||||||||||||||||| Sbjct: 24540 aggacccaggaaatgctgcc 24559
>dbj|AP005921.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1061F01 Length = 70013 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 17 ctcgccgcggcgctgctcctctccgcgc 44 ||||||||||||||||| ||| |||||| Sbjct: 13883 ctcgccgcggcgctgctgctccccgcgc 13856
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tgcgccgttctgctcgccgc 24 |||||||||||||||||||| Sbjct: 600923 tgcgccgttctgctcgccgc 600904
>dbj|AK064100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-A01, full insert sequence Length = 1381 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 17 ctcgccgcggcgctgctcctctccgcgc 44 ||||||||||||||||| ||| |||||| Sbjct: 134 ctcgccgcggcgctgctgctccccgcgc 161
>emb|AL590007.5| Human DNA sequence from clone RP11-233D11 on chromosome 13 Contains the 5' end of the gene for a novel calx-beta domain containing protein similar to sea urchin ECM3 and a CpG island, complete sequence Length = 148828 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 aggacccaggaaatgctgcc 421 |||||||||||||||||||| Sbjct: 101677 aggacccaggaaatgctgcc 101658
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctgcgccgttctgctcgccg 23 |||||||||||||||||||| Sbjct: 734480 ctgcgccgttctgctcgccg 734461
>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence Length = 162528 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tgcagctgtcacaatgtaca 155 |||||||||||||||||||| Sbjct: 100605 tgcagctgtcacaatgtaca 100624 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,936,200 Number of Sequences: 3902068 Number of extensions: 2936200 Number of successful extensions: 59458 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58239 Number of HSP's gapped (non-prelim): 1197 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)