ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33k08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 254 bits (128), Expect = 3e-64 Identities = 212/240 (88%) Strand = Plus / Plus Query: 57 gacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaacctgcagctg 116 |||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| Sbjct: 326 gacgcgctgaagctgggcgtgtgcgccaacttgctgaacgggctgatcaacgcgaccctg 385 Query: 117 ggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgacctggaggcg 176 || |||||||| | || ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 386 gggacgccgcccaggacgccgtgctgcacgctgatccaggggctggcggacctggaggcg 445 Query: 177 gcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgccc 236 ||||||||||| ||||| | |||| ||||||| |||| ||||||||||||||| ||||| Sbjct: 446 gcggtgtgcctctgcaccgtcctcagggccaacgtcctgggcatcaacctcaacctgccc 505 Query: 237 atcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 ||| |||||||||||||||||||||||||||||| | |||||| | |||||||||||| Sbjct: 506 atcaacctcagcctcctcgtcaactactgcggcaggcgcgtcccatcgggcttccagtgc 565
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 224 bits (113), Expect = 3e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 107 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 198711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 198770 Query: 108 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 167 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 198771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 198830 Query: 168 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 227 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 198831 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 198890 Query: 228 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 287 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 198891 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 198950 Query: 288 ttccagtgc 296 ||||||||| Sbjct: 198951 ttccagtgc 198959 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 189740 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 187036 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 155 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 214 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 189797 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 189856 Query: 215 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 266 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 189857 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 189908 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||| | ||||||||||||||||| Sbjct: 33114207 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 33114172 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 187137 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 187196 Query: 259 actactgc 266 |||||||| Sbjct: 187197 actactgc 187204 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 acgtgcccatcgacctcagcctcctcgtc 257 |||||||||||| ||||| |||||||||| Sbjct: 31306701 acgtgcccatcggcctcaacctcctcgtc 31306729 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 agggcggtggcggtggcggat 30 ||||||||||||||||||||| Sbjct: 22619521 agggcggtggcggtggcggat 22619501
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 224 bits (113), Expect = 3e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 107 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 35778 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 35837 Query: 108 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 167 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 35838 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 35897 Query: 168 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 227 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 35898 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 35957 Query: 228 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 287 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 35958 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 36017 Query: 288 ttccagtgc 296 ||||||||| Sbjct: 36018 ttccagtgc 36026 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26759 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 26807 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 24055 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 24103 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 155 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 214 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 26864 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 26923 Query: 215 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 266 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 26924 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 26975 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaac 230 |||||||||||||||| |||||||| |||||| Sbjct: 24204 tcaaggccaacatcctcggcatcaatctcaac 24235
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 224 bits (113), Expect = 3e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 107 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 132711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 132770 Query: 108 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 167 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 132771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 132830 Query: 168 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 227 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 132831 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 132890 Query: 228 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 287 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132891 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 132950 Query: 288 ttccagtgc 296 ||||||||| Sbjct: 132951 ttccagtgc 132959 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 123740 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 120988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 121036 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 155 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 214 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 123797 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 123856 Query: 215 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 266 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 123857 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 123908 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 121137 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 121196 Query: 259 actactgc 266 |||||||| Sbjct: 121197 actactgc 121204
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 224 bits (113), Expect = 3e-55 Identities = 215/249 (86%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 107 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 198711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 198770 Query: 108 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 167 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 198771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 198830 Query: 168 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 227 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 198831 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 198890 Query: 228 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 287 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 198891 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 198950 Query: 288 ttccagtgc 296 ||||||||| Sbjct: 198951 ttccagtgc 198959 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 189740 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 187036 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 155 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 214 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 189797 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 189856 Query: 215 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 266 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 189857 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 189908 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||| | ||||||||||||||||| Sbjct: 33204717 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 33204682 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 187137 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 187196 Query: 259 actactgc 266 |||||||| Sbjct: 187197 actactgc 187204 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 acgtgcccatcgacctcagcctcctcgtc 257 |||||||||||| ||||| |||||||||| Sbjct: 31397217 acgtgcccatcggcctcaacctcctcgtc 31397245 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 agggcggtggcggtggcggat 30 ||||||||||||||||||||| Sbjct: 22612550 agggcggtggcggtggcggat 22612530
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 224 bits (113), Expect = 3e-55 Identities = 215/249 (86%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 107 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 63945 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 63886 Query: 108 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 167 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 63885 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 63826 Query: 168 ctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctc 227 || ||||| || |||||||| ||||| || ||| |||||||||||||||||||||||| Sbjct: 63825 cttgaggccgccgtgtgcctctgcaccgccctccgcgccaacatccttggcatcaacctc 63766 Query: 228 aacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgccggc 287 ||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 63765 aacctccccatcaacctcagcctcctcgtcaactactgcggccgctccgtcccctccggc 63706 Query: 288 ttccagtgc 296 ||||||||| Sbjct: 63705 ttccagtgc 63697 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72962 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 72914 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75666 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 75618 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Minus Query: 155 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 214 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 72857 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 72798 Query: 215 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 266 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 72797 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 72746 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Minus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||||||||||||||| |||||||| |||||| | ||| |||| ||| ||||| ||| Sbjct: 75517 tcaaggccaacatcctcggcatcaatctcaacatccccgtcgatctctctctccttctca 75458 Query: 259 actactgc 266 |||||||| Sbjct: 75457 actactgc 75450
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 335 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 394 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 395 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 454 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 455 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 498 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 261 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 296
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 26823815 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 26823874 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 26823875 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 26823934 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 26823935 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 26823978 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 218 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 26833456 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 26833515 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 278 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 26833516 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 26833575 Query: 279 cc 280 || Sbjct: 26833576 cc 26833577 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 26823741 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 26823776
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 2358 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 2417 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 2418 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 2477 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 2478 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 2521 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 218 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 11999 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 12058 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 278 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 12059 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 12118 Query: 279 cc 280 || Sbjct: 12119 cc 12120 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 2284 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 2319
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 89868 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 89927 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 89928 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 89987 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 89988 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 90031 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 218 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 99509 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 99568 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 278 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 99569 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 99628 Query: 279 cc 280 || Sbjct: 99629 cc 99630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 89794 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 89829
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 335 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 394 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 395 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 454 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 455 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 498 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 261 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 296
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 260 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 319 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| || ||||||||| || |||||||||||| | |||||||||||||||||| Sbjct: 320 cggccatcaggggcaacatcctcggaatcaacctcaacctccccatcgacctcagcctca 379 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || |||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 380 tcctcaactactgcggcaagaccgtccccaccggcttcaagtgc 423 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 186 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 221
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 143 bits (72), Expect = 8e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 227 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 286 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| |||||| |||||| || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 287 cggccatcaagggcaacattctcggcatcaaccttaacctccccgtcgacctcagcctca 346 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || ||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 347 tcctcaactactgcggcaagcgcgtgcccaccggcttcaagtgc 390 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 153 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 188
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 143 bits (72), Expect = 8e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 147474 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 147533 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| |||||| |||||| || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 147534 cggccatcaagggcaacattctcggcatcaaccttaacctccccgtcgacctcagcctca 147593 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || ||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 147594 tcctcaactactgcggcaagcgcgtgcccaccggcttcaagtgc 147637 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 144274 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 144333 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 144334 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 144393 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttc 290 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 144394 tcctcaactactgcggcaagcgcgtgcccaccggcttc 144431 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 147400 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 147435 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 144200 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 144235 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaac 209 ||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 157632 ctcgccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaac 157682 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 246 agcctcctcgtcaactactgcggcaagaacgtcccc 281 |||||||| ||||||||||| |||||| ||||||| Sbjct: 157719 agcctccttgtcaactactgtggcaagtgcgtcccc 157754
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 143 bits (72), Expect = 8e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| |||| Sbjct: 27716848 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcctctgca 27716907 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| |||||| |||||| || ||||||||||| ||| | ||| |||||||||||||| Sbjct: 27716908 cggccatcaagggcaacattctcggcatcaaccttaacctccccgtcgacctcagcctca 27716967 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttccagtgc 296 || ||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 27716968 tcctcaactactgcggcaagcgcgtgcccaccggcttcaagtgc 27717011 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 27713648 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 27713707 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 27713708 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 27713767 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttc 290 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 27713768 tcctcaactactgcggcaagcgcgtgcccaccggcttc 27713805 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 27716774 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 27716809 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 27713574 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 27713609 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 31096062 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 31096108 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 32827379 gtgccccatcgacgcgctcaagctcggcgtgtgcg 32827345 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 |||||||| ||||||||||| |||| ||| ||| |||||||||||| Sbjct: 31085643 ctcgtcaatgactgcggcaagtacgtgccctccgacttccagtgccc 31085689 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaac 209 ||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 27727006 ctcgccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaac 27727056 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 246 agcctcctcgtcaactactgcggcaagaacgtcccc 281 |||||||| ||||||||||| |||||| ||||||| Sbjct: 27727093 agcctccttgtcaactactgtggcaagtgcgtcccc 27727128 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gtacgtacgtacgcgcatgc 384 |||||||||||||||||||| Sbjct: 23327002 gtacgtacgtacgcgcatgc 23327021 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 agggcggtggcggtggcggatcaggcgg 37 ||||||||||||| || ||||||||||| Sbjct: 21209760 agggcggtggcggcgggggatcaggcgg 21209787
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 165 gacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaac 224 |||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||| Sbjct: 66959 gacctggaggcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgggcatcaac 66900 Query: 225 ctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgcc 284 |||||| | |||||| ||||||||||| || |||||| |||||||||| ||||||| || Sbjct: 66899 ctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggcgtccccacc 66840 Query: 285 ggcttc 290 |||||| Sbjct: 66839 ggcttc 66834 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 67074 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 67030
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 165 gacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaac 224 |||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||| Sbjct: 21267400 gacctggaggcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgggcatcaac 21267459 Query: 225 ctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgcc 284 |||||| | |||||| ||||||||||| || |||||| |||||||||| ||||||| || Sbjct: 21267460 ctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggcgtccccacc 21267519 Query: 285 ggcttc 290 |||||| Sbjct: 21267520 ggcttc 21267525 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 97 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 21139421 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 21139372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21178308 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21178249 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 21178248 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 21178189 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 21178188 tcctcaacaactgcggcaaga 21178168 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21171594 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21171535 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 21171534 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 21171475 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 21171474 tcctcaacaactgcggcaaga 21171454 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 104 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 10072477 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 10072421 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 21155945 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 21155893 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21175040 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21174981 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 21174980 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 21174921 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 21174920 tcctcaacaactgcggcaaga 21174900 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21151830 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21151778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21148537 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21148485 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 21143791 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 21143739 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 21171680 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 21171635 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 218 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 10072307 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 10072250 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 10063521 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 10063468 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21267285 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 21267329 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 21178394 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 21178350 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 162 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 218 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 21143680 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 21143621 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 21143620 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 21143566 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Minus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21148451 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21148392 Query: 197 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 256 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 21148391 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 21148332 Query: 257 caac 260 |||| Sbjct: 21148331 caac 21148328 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 10055832 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 10055789 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21151744 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21151685 Query: 197 gctcaaggccaacatccttggcatcaacct 226 ||||||||||| | || ||||||||||| Sbjct: 21151684 cgtcaaggccaacgtgctgggcatcaacct 21151655 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 64 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 10048288 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 10048251 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 21175126 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 21175082 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 21136809 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 21136765 Score = 44.1 bits (22), Expect = 0.53 Identities = 94/118 (79%) Strand = Plus / Minus Query: 156 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 215 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 21155840 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 21155781 Query: 216 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 21155780 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 21155723 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 201 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 260 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 21139271 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 21139212 Query: 261 tactgcggcaaga 273 | |||||||||| Sbjct: 21139211 aagtgcggcaaga 21139199 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 199 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 21136661 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 21136621
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 165 gacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggcatcaac 224 |||||||||||||||||||||||||||||||| ||||||||||| | || ||||||||| Sbjct: 21278664 gacctggaggcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgggcatcaac 21278723 Query: 225 ctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtccccgcc 284 |||||| | |||||| ||||||||||| || |||||| |||||||||| ||||||| || Sbjct: 21278724 ctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggcgtccccacc 21278783 Query: 285 ggcttc 290 |||||| Sbjct: 21278784 ggcttc 21278789 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 97 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 21150685 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 21150636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21189572 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21189513 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 21189512 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 21189453 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 21189452 tcctcaacaactgcggcaaga 21189432 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Minus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21182858 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21182799 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 21182798 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 21182739 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 21182738 tcctcaacaactgcggcaaga 21182718 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 104 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 10078516 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 10078460 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 21167209 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 21167157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 21186304 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 21186245 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 21186244 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 21186185 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 21186184 tcctcaacaactgcggcaaga 21186164 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21163094 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21163042 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21159801 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21159749 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 21155055 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 21155003 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 21182944 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 21182899 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 218 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 10078346 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 10078289 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 10069560 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 10069507 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21278549 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 21278593 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 21189658 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 21189614 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 162 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 218 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 21154944 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 21154885 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 21154884 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 21154830 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Minus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21159715 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21159656 Query: 197 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 256 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 21159655 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 21159596 Query: 257 caac 260 |||| Sbjct: 21159595 caac 21159592 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 10061871 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 10061828 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 21163008 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 21162949 Query: 197 gctcaaggccaacatccttggcatcaacct 226 ||||||||||| | || ||||||||||| Sbjct: 21162948 cgtcaaggccaacgtgctgggcatcaacct 21162919 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 64 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 10054327 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 10054290 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 21186390 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 21186346 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 21148073 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 21148029 Score = 44.1 bits (22), Expect = 0.53 Identities = 94/118 (79%) Strand = Plus / Minus Query: 156 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 215 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 21167104 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 21167045 Query: 216 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 21167044 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 21166987 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 201 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 260 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 21150535 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 21150476 Query: 261 tactgcggcaaga 273 | |||||||||| Sbjct: 21150475 aagtgcggcaaga 21150463 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 199 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 21147925 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 21147885
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 227 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 286 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 287 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 346 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttc 290 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 347 tcctcaactactgcggcaagcgcgtgcccaccggcttc 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 153 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 188
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 302 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcctctgca 361 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 |||| ||| | ||||||||| ||||||||||||||| | ||| |||||||||||||| Sbjct: 362 cggccatcagaggcaacatcctcggcatcaacctcaacctccccgtcgacctcagcctca 421 Query: 253 tcgtcaactactgcggcaagaacgtccccgccggcttc 290 || ||||||||||||||||| ||| ||| |||||||| Sbjct: 422 tcctcaactactgcggcaagcgcgtgcccaccggcttc 459 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||||| Sbjct: 228 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 263
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 ||||||||||| ||||| | | ||||||| |||||||||||| || || ||||| |||| Sbjct: 300 agccgtgctgctcgctgctggacgggctcgtcgacctggaggccgccgtctgcctctgca 359 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || |||||||||||||||| ||||||||||| ||| | |||||||||||||||||| Sbjct: 360 ccgccgtcaaggccaacatcctcggcatcaaccttaacctccccatcgacctcagcctca 419 Query: 253 tcgtcaactactgcggcaagaac 275 || ||||| |||||||||||||| Sbjct: 420 tcctcaacaactgcggcaagaac 442 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 58 acgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||||||||||||||||||||| Sbjct: 228 acgcgctgaagctgggcgtgtgcgccaacgtgct 261
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 156 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 215 |||||||||||||| ||||| || || ||||| ||||| ||||||||||||||| | || Sbjct: 366 gggctcgccgacctagaggccgccgtctgcctctgcaccgcgctcaaggccaacgtgctc 425 Query: 216 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 |||||||||||| |||| ||| || | |||| ||| ||| |||||||||||||||||| | Sbjct: 426 ggcatcaacctcgacgtccccgtcaagctcaccctgctcctcaactactgcggcaagagc 485 Query: 276 gtccc 280 ||||| Sbjct: 486 gtccc 490 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 58 acgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||| ||||||||||||||||||||||| Sbjct: 271 acgcgctgaaactgggcgtgtgcgccaacgtgct 304
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 164 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 197 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 256 ||||||||||||| |||| ||||||||| ||||||| ||| |||||||| ||||||| | Sbjct: 173 gctcaaggccaacgtcctcggcatcaacatcaacgtccccgtcgacctcgtcctcctcct 232 Query: 257 caactactgc 266 |||||||||| Sbjct: 233 caactactgc 242
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 312 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 155 ggggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcct 214 |||||||| |||||| || || || || ||||| ||||| || ||||||||||| |||| Sbjct: 369 ggggctcgtcgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgtcct 428 Query: 215 tggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgc 266 ||||||||| ||||||| ||| |||||||| ||||||| ||||||||||| Sbjct: 429 cggcatcaacatcaacgtccccgtcgacctcgtcctcctcctcaactactgc 480
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 218 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 327 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 386 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 278 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 387 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 446 Query: 279 cc 280 || Sbjct: 447 cc 448
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 91.7 bits (46), Expect = 3e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 218 ||||||||||| ||||| || || || || ||||| || ||||||||||| | || ||| Sbjct: 327 ctcgccgaccttgaggccgccgtctgtctctgcaccgccatcaaggccaacgtgctcggc 386 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 278 |||| |||| || | ||| || | |||||||||||||||||||||||||||||||||||| Sbjct: 387 atcaccctcgacatccccgtcaagctcagcctcctcgtcaactactgcggcaagaacgtc 446 Query: 279 cc 280 || Sbjct: 447 cc 448
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 282 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 330 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaac 230 |||||||||||||||| |||||||| |||||| Sbjct: 431 tcaaggccaacatcctcggcatcaatctcaac 462
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 95 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 351 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaac 230 |||||||||||||||| |||||||| |||||| Sbjct: 452 tcaaggccaacatcctcggcatcaatctcaac 483
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 97 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 193 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 242 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 201 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 260 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 343 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 402 Query: 261 tactgcggcaaga 273 | |||||||||| Sbjct: 403 aagtgcggcaaga 415
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 97 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 66285 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 66334 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 34112 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 34171 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 34172 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 34231 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 34232 tcctcaacaactgcggcaaga 34252 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 27398 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 27457 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 27458 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 27517 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 27518 tcctcaacaactgcggcaaga 27538 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 49761 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 49813 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 61915 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 61967 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 57169 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 57221 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 53876 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 53928 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 30666 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 30725 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 30726 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 30785 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 30786 tcctcaacaactgcggcaaga 30806 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 34026 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 34071 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 162 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 218 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 62026 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 62085 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 62086 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 62140 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 27312 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 27356 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 57255 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 57314 Query: 197 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 256 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 57315 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 57374 Query: 257 caac 260 |||| Sbjct: 57375 caac 57378 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 53962 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 54021 Query: 197 gctcaaggccaacatccttggcatcaacct 226 ||||||||||| | || ||||||||||| Sbjct: 54022 cgtcaaggccaacgtgctgggcatcaacct 54051 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 68897 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 68941 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 30580 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 30624 Score = 44.1 bits (22), Expect = 0.53 Identities = 94/118 (79%) Strand = Plus / Plus Query: 156 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 215 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 49866 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 49925 Query: 216 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 49926 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 49983 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 199 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 69045 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 69085 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 201 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 260 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 66435 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 66494 Query: 261 tactgcggcaaga 273 | |||||||||| Sbjct: 66495 aagtgcggcaaga 66507
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 97 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1849 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 1898 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 201 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 260 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 1999 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 2058 Query: 261 tactgcggcaaga 273 | |||||||||| Sbjct: 2059 aagtgcggcaaga 2071
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 97 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 286 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 201 aaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaac 260 ||||||||| | || ||| ||||||||||||| ||| |||| |||| ||| || ||||| Sbjct: 387 aaggccaacgtgctcggcgtcaacctcaacgtccccgtcgagctcaagctcatcctcaac 446 Query: 261 tactgcggcaaga 273 | |||||||||| Sbjct: 447 aagtgcggcaaga 459
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 227 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 286 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 287 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 346 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 347 tcctcaacaactgcggcaaga 367 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 141 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 185
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 233 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 292 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| Sbjct: 293 ccgccatcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctca 352 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 353 tcctcaacaactgcggcaaga 373 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 147 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 192
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 104 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 130 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 186 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 218 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 300 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 357
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 104 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 89236 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 89180 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 218 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 89066 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 89009 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 80280 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 80227 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 72591 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 72548 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 64 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 65047 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 65010
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 104 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 192 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 248 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 218 catcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 ||||||||||||| ||||| ||||||||||| || || ||||| | |||||||||||| Sbjct: 362 catcaacctcaacctgcccgtcgacctcagcatcatcctcaacaagtgcggcaagaac 419
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 296 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 355 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| |||||| | |||||||||||||||||| Sbjct: 356 ccgccatcaaggccaacgtgctgggcatcaagctcaacctccccatcgacctcagcctca 415 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 416 tcctcaacaactgcggcaaga 436 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 210 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 254
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 216 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaac 275 ||||||||||||||| | |||||| ||||||||||| || |||||| |||||||||| | Sbjct: 394 ggcatcaacctcaacctccccatccacctcagcctcatcctcaacttctgcggcaagggc 453 Query: 276 gtccccgccggcttc 290 |||||| |||||||| Sbjct: 454 gtccccaccggcttc 468 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 348 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 392
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 ||||||||||| | || ||| ||||||||||| | |||||||||||||||||| || ||| Sbjct: 386 tcaaggccaacgtgctcggcctcaacctcaacatccccatcgacctcagcctcatcctca 445 Query: 259 actactgcggcaaga 273 || |||||||||||| Sbjct: 446 acaactgcggcaaga 460 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 234 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 279
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 163 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 215 Score = 44.1 bits (22), Expect = 0.53 Identities = 94/118 (79%) Strand = Plus / Plus Query: 156 gggctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatcctt 215 |||||||||||||| || || || || ||||| ||||| || ||||||||||| | || Sbjct: 268 gggctcgccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaacgtgctc 327 Query: 216 ggcatcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 ||||| || |||||| | || |||| || |||||| || ||||| | |||||||||| Sbjct: 328 ggcatgaaactcaacctcgccgtcgatctaagcctcatcctcaacaagtgcggcaaga 385
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 135 ccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacg 194 ||||||||| ||||| | |||| |||| |||||| ||||| || |||||||| ||||| Sbjct: 307 ccgtgctgcccgctgctgaagggactcgtcgacctcgaggccgccgtgtgcctctgcacc 366 Query: 195 gcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctc 254 || |||||| | |||| || ||||| |||||| ||||| |||||||||||||| || Sbjct: 367 gccatcaagggagaggtcctcggaatcaagctcaacctgcccgtcgacctcagcctcatc 426 Query: 255 gtcaactactgcggcaagaacgtccccgccgg 286 ||||| |||||||||||| ||| ||| |||| Sbjct: 427 ctcaaccactgcggcaagaccgtgcccaccgg 458 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaa 85 ||||||||| |||||||||||||||||||| Sbjct: 231 cgacgcgctcaagctgggcgtgtgcgccaa 260
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 203 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 262 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 263 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 322 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 323 tcctcaacaactgcggcaaga 343 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 117 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 161
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 148 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 200 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 234 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 293 Query: 197 gctcaaggccaacatccttggcatcaacct 226 ||||||||||| | || ||||||||||| Sbjct: 294 cgtcaaggccaacgtgctgggcatcaacct 323
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 148 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 200 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 137 gtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgcacggc 196 ||||||| ||||| | |||||| |||||||||| || || || || ||||| ||||| || Sbjct: 234 gtgctgctcgctgctgcaggggatcgccgacctcgacgccgccgtctgcctctgcaccgc 293 Query: 197 gctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgt 256 |||||||||| | || ||||||||||||||| | ||| |||| || |||||| || | Sbjct: 294 cgtcaaggccaatgtgctgggcatcaacctcaacctccccgtcgatctgagcctcatcct 353 Query: 257 caac 260 |||| Sbjct: 354 caac 357
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 178 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 230 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 162 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 218 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 289 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 348 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 349 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 403
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 |||||||||||||||| |||||||||||||||||||| Sbjct: 24131130 cgacgcgctgaagctgcgcgtgtgcgccaacgtgctc 24131166 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcctcgtcaactactgcggc 269 ||||||||||||||||||||| Sbjct: 16863511 ctcctcgtcaactactgcggc 16863531
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 |||||||||||||||| |||||||||||||||||||| Sbjct: 84616 cgacgcgctgaagctgcgcgtgtgcgccaacgtgctc 84652
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 100 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 257 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 309 Score = 58.0 bits (29), Expect = 4e-05 Identities = 94/115 (81%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 162 gccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttgg---c 218 |||||||| || || || || ||||| ||||| || ||||||||||| | ||||| | Sbjct: 368 gccgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaacgttcttgggatc 427 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaaga 273 |||||||||||| | ||| |||| ||||||||| || ||||| |||||||||||| Sbjct: 428 atcaacctcaacatccccgtcgatctcagcctcatcctcaacaactgcggcaaga 482
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 133 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcctgtgca 192 |||| |||||| ||||| || | || |||| |||||| || || || || ||||| |||| Sbjct: 288 agccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctgca 347 Query: 193 cggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcc 252 | || ||||||||||| | || |||||||| ||| || | ||| |||||||||||||| Sbjct: 348 ccgccgtcaaggccaacgtgctcggcatcaagctcgacctccccgtcgacctcagcctca 407 Query: 253 tcgtcaactactgcggcaaga 273 || ||||| |||||||||||| Sbjct: 408 tcctcaacaactgcggcaaga 428 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 202 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 246
>ref|NM_195930.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.14), mRNA Length = 393 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 145 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 198
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 93 |||||||||||||||| | ||||||||||||||||||| Sbjct: 9364 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 9327
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 93 |||||||||||||||| | ||||||||||||||||||| Sbjct: 87252 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 87289
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 93 |||||||||||||||| | ||||||||||||||||||| Sbjct: 11807633 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 11807596 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 11306341 gagggcggtggcggtggcgg 11306360
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 181 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcg 240 ||||||| ||||| || ||||||||||| |||| |||||| |||||||||||||| | Sbjct: 348 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctcaacgtgcccctta 407 Query: 241 acctcagcctcctcgtcaactactgcggca 270 ||||| |||| || ||||| ||||||||| Sbjct: 408 gcctcaacctcatcctcaacaactgcggca 437 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 224 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaacgtgct 267
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 93 |||||||||||||||| | ||||||||||||||||||| Sbjct: 11886044 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 11886007 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 11385530 gagggcggtggcggtggcgg 11385549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 |||||||||||||||| | |||||||||||||||||| Sbjct: 30578544 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 30578508 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 gggcggtggcggtggcggatcagg 34 ||||||||||||||| |||||||| Sbjct: 12050158 gggcggtggcggtgggggatcagg 12050181 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgctgaagctgggcgtgtg 79 |||||||||||||||||||| Sbjct: 4437647 gcgctgaagctgggcgtgtg 4437666 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 332530 gagggcggtggcggtggcgg 332549
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 |||||||||||||||| | |||||||||||||||||| Sbjct: 61148 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 61112
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 |||||||||||||||| | |||||||||||||||||| Sbjct: 20821 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 20785
>ref|NM_185028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||| | ||||||||||||||||| Sbjct: 87 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 122
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 181 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgccc 236 ||||||| ||||| || ||||||||||| |||| |||||| |||||||||||||| Sbjct: 286 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctcaacgtgccc 341 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 162 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaaagtgct 205
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||| | ||||||||||||||||| Sbjct: 130348 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 130383
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 |||||||||||||||| | ||||||||||||||||| Sbjct: 9101 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 9136
>ref|NM_185320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 248 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 307 Query: 259 actactgcggc 269 ||||||||||| Sbjct: 308 actactgcggc 318
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 412 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 458
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 78143 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 78189 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 |||||||| ||||||||||| |||| ||| ||| |||||||||||| Sbjct: 67724 ctcgtcaatgactgcggcaagtacgtgccctccgacttccagtgccc 67770
>gb|AF149815.1| Oryza sativa unknown gene Length = 1293 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 90 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 149 Query: 259 actactgcggc 269 ||||||||||| Sbjct: 150 actactgcggc 160
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 343404 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 343463 Query: 259 actactgcggc 269 ||||||||||| Sbjct: 343464 actactgcggc 343474 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 3455297 gtgcccgatcgacgcgctgaagctg 3455273 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgga 29 ||||||||||||||||||||| Sbjct: 24202947 gagggcggtggcggtggcgga 24202967
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggcatcaacctcaacgtgcccatcgacctcagcctcctcgtca 258 |||| |||||| | || ||| |||||||| |||| ||| |||||||| ||||||| ||| Sbjct: 53357 tcaacgccaaccttctcggcctcaacctcgacgtccccgtcgacctctccctcctcctca 53416 Query: 259 actactgcggc 269 ||||||||||| Sbjct: 53417 actactgcggc 53427
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full insert sequence Length = 713 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 ||||||||| | ||||||||| |||||||| || ||||||||||||| Sbjct: 272 ctcgtcaacgagtgcggcaagcacgtcccctccagcttccagtgccc 318
>ref|NM_195926.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNAb0078C13.10), mRNA Length = 414 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 64 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 101 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 182 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 219
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 181 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcg 240 ||||||| ||||| || ||||||||||| |||| |||||| ||||| |||||||| | Sbjct: 361 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctccacgtgcccctta 420 Query: 241 acctcagcctcctcgtcaactactgcggca 270 ||||| |||| || ||||| ||||||||| Sbjct: 421 gcctcaacctcatcctcaacaactgcggca 450 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaacgtgct 280
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.17), mRNA Length = 489 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 189 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 233 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 199 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 337 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 377
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 19948991 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 19949027 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 gggcggtggcggtggcggatcagg 34 |||||||||||| ||||||||||| Sbjct: 9359182 gggcggtggcggcggcggatcagg 9359205
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 72001 gtgcccgatcgacgcgctgaagctg 71977
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 146851 gtgcccgatcgacgcgctgaagctg 146827
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full insert sequence Length = 764 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 268 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 312 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgct 199 ||||||||| |||| || || |||||||| ||||||||||| Sbjct: 416 ctcgccgacgtggacgccgccgtgtgcctctgcacggcgct 456
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctg 71 ||||||||||||||||||||||||| Sbjct: 925 gtgcccgatcgacgcgctgaagctg 949
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Plus Query: 181 tgtgcctgtgcacggcgctcaaggccaacatccttggcatcaacctcaacgtgcccatcg 240 ||||||| ||||| || ||||||||||| |||| |||||| ||||||| ||||| | Sbjct: 354 tgtgcctctgcaccgccatcaaggccaacgtcctcggcatccacctcaatatgcccctta 413 Query: 241 acctcagcctcctcgtcaactactgcggcaaga 273 ||||| |||| || ||||| |||||||||||| Sbjct: 414 gcctcaacctcatcctcaacaactgcggcaaga 446 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 91 ||||||||||||||||| || || ||||||||||||||||| Sbjct: 230 tgcccgatcgacgcgctcaaactcaaggtgtgcgccaacgtgct 273
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 19875205 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 19875241 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 gggcggtggcggtggcggatcagg 34 |||||||||||| ||||||||||| Sbjct: 9359067 gggcggtggcggcggcggatcagg 9359090
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 92 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 78269 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 78233
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence Length = 1282 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 106 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 636 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 695 Query: 107 cctg 110 |||| Sbjct: 696 cctg 699
>emb|X60432.1|ZMPRP Z.mays PRP gene Length = 1402 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 106 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 762 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 821 Query: 107 cctg 110 |||| Sbjct: 822 cctg 825
>gb|AY105001.1| Zea mays PCO123892 mRNA sequence Length = 1144 Score = 48.1 bits (24), Expect = 0.034 Identities = 54/64 (84%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 106 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 423 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 482 Query: 107 cctg 110 |||| Sbjct: 483 cctg 486
>dbj|AP004494.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09I17, TM0026, complete sequence Length = 103129 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 211 tccttggcatcaacctcaacgtgcccatcgac 242 |||||||||||||||||||| | ||||||||| Sbjct: 5891 tccttggcatcaacctcaacatccccatcgac 5860 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 211 tccttggcatcaacctcaacgtgcccatcgac 242 |||||||||||||||||||| | ||||||||| Sbjct: 5303 tccttggcatcaacctcaacatccccatcgac 5272
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 540 gtgccccatcgacgcgctcaagctcggcgtgtgcg 574
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 ctcgtcaactactgcggcaagaacgtccccgccggcttccagtgccc 298 |||||||| ||||||||||| |||| ||| ||| |||||||||||| Sbjct: 538 ctcgtcaatgactgcggcaagtacgtgccctccgacttccagtgccc 584
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaac 209 ||||||||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 271 ctcgccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaac 321 Score = 40.1 bits (20), Expect = 8.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 246 agcctcctcgtcaactactgcggcaagaacgtcccc 281 |||||||| ||||||||||| |||||| ||||||| Sbjct: 358 agcctccttgtcaactactgtggcaagtgcgtcccc 393
>emb|Z93108.1|MAZ93108 M.acuminata mRNA; clone pBAN UU70 Length = 785 Score = 46.1 bits (23), Expect = 0.13 Identities = 109/140 (77%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtgtgcctgtgcacggcgctcaaggccaacatccttggc 218 |||| |||||| ||||| || |||||||| ||| | || ||| |||| | |||||||| Sbjct: 351 ctcgtcgacctcgaggccgccgtgtgcctttgcnctgctatcanggccnatgtccttggc 410 Query: 219 atcaacctcaacgtgcccatcgacctcagcctcctcgtcaactactgcggcaagaacgtc 278 || | |||||| | |||||| | |||||| ||| ||||||||||||| |||| | Sbjct: 411 attcatctcaacctccccatcnncttcagccntctcctcaactactgcggtnagaaggct 470 Query: 279 cccgccggcttccagtgccc 298 ||| |||| ||||||||||| Sbjct: 471 cccaccggtttccagtgccc 490
>dbj|AK108560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A10, full insert sequence Length = 719 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 75 gtgtgcgccaacgtgctcaacgggctg 101 ||||||||||||||||| ||||||||| Sbjct: 274 gtgtgcgccaacgtgctaaacgggctg 300
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 690 gtgccccatcgacgcgctcaagctcggcgtgtgcg 724
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 690 gtgccccatcgacgcgctcaagctcggcgtgtgcg 724
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 686 gtgccccatcgacgcgctcaagctcggcgtgtgcg 720
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 694 gtgccccatcgacgcgctcaagctcggcgtgtgcg 728
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 692 gtgccccatcgacgcgctcaagctcggcgtgtgcg 726
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 22614 gtgccccatcgacgcgctcaagctcggcgtgtgcg 22580
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 47 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 81 |||||| ||||||||||| ||||| |||||||||| Sbjct: 89665 gtgccccatcgacgcgctcaagctcggcgtgtgcg 89631
>ref|NM_104930.3| Arabidopsis thaliana lipid binding AT1G62510 mRNA, complete cds Length = 821 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 450 tgcactgcgctcaaggctaacatcctcggtatcaacct 487
>ref|XM_479401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 cgacctggaggcggcggtgtgc 185 |||||||||||||||||||||| Sbjct: 111 cgacctggaggcggcggtgtgc 132
>gb|BT010488.1| Arabidopsis thaliana At1g62510 gene, complete cds Length = 450 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 340 tgcactgcgctcaaggctaacatcctcggtatcaacct 377
>dbj|AK221906.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709 and emb|Z47685, complete cds, clone: RAFL22-34-F07 Length = 800 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 423 tgcactgcgctcaaggctaacatcctcggtatcaacct 460
>dbj|AK221810.1| Arabidopsis thaliana mRNA for similar to 14KD proline-rich protein DC2.15 precursor, complete cds, clone: RAFL21-88-G23 Length = 801 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 423 tgcactgcgctcaaggctaacatcctcggtatcaacct 460
>gb|S68113.1| proline-rich SAC51 [Brassica napus=oilseed rape, pods, mRNA, 756 nt] Length = 756 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 348 tgcaccgcgcttaaggctaacatccttgggatcaacct 385
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 cgacctggaggcggcggtgtgc 185 |||||||||||||||||||||| Sbjct: 27635189 cgacctggaggcggcggtgtgc 27635168
>emb|BX817278.1|CNS0ACNX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 584 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 208 tgcactgcgctcaaggctaacatcctcggtatcaacct 245
>dbj|AK220631.1| Arabidopsis thaliana gene, similar to 14KD proline-rich protein DC2.15 precursor (sp|P14009); similar to ESTs emb|Z17709 and emb|Z47685, complete cds, clone: RAFL21-51-F08 Length = 805 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 423 tgcactgcgctcaaggctaacatcctcggtatcaacct 460
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1, complete sequence Length = 97054 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 27730 tgcactgcgctcaaggctaacatcctcggtatcaacct 27693
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 cgacctggaggcggcggtgtgc 185 |||||||||||||||||||||| Sbjct: 92182 cgacctggaggcggcggtgtgc 92161
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 cgacctggaggcggcggtgtgc 185 |||||||||||||||||||||| Sbjct: 14291 cgacctggaggcggcggtgtgc 14270
>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence Length = 29585 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 ggcggtggcggtggcggatcaggcgg 37 |||||||||||||||||||| ||||| Sbjct: 16502 ggcggtggcggtggcggatccggcgg 16477
>emb|X71618.1|BNPRPPDA B.napus proline-rich mRNA accumulating during pod development Length = 756 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 tgcacggcgctcaaggccaacatccttggcatcaacct 226 ||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 348 tgcaccgcgcttaaggctaacatccttgggatcaacct 385
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 agggcggtggcggtggcggat 30 ||||||||||||||||||||| Sbjct: 48625 agggcggtggcggtggcggat 48645
>gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of the complete genome Length = 11173 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tgcccgatcgacgcgctgaag 68 ||||||||||||||||||||| Sbjct: 2279 tgcccgatcgacgcgctgaag 2299
>ref|XM_481980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcctcgtcaactactgcggc 269 ||||||||||||||||||||| Sbjct: 97 ctcctcgtcaactactgcggc 117
>ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 gctgggcgtgtgcgccaacgtgctc 92 |||| |||||||||||||||||||| Sbjct: 957 gctgcgcgtgtgcgccaacgtgctc 981
>ref|XM_469883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 acgtgcccatcgacctcagcctcctcgtc 257 |||||||||||| ||||| |||||||||| Sbjct: 368 acgtgcccatcggcctcaacctcctcgtc 396
>emb|AL663114.4| Mouse DNA sequence from clone RP23-269C21 on chromosome 11 Contins the 3' end of the Abca13 gene for ATP-binding cassette sub-family A (ABC1) member 13, complete sequence Length = 96411 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tgcctgcatgcatgatctaca 402 ||||||||||||||||||||| Sbjct: 58720 tgcctgcatgcatgatctaca 58740
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 acgtgcccatcgacctcagcctcctcgtc 257 |||||||||||| ||||| |||||||||| Sbjct: 113942 acgtgcccatcggcctcaacctcctcgtc 113970
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 ggcggatcaggcgggctcgcg 44 ||||||||||||||||||||| Sbjct: 441672 ggcggatcaggcgggctcgcg 441652 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ggcggtggcggtggcggatc 31 |||||||||||||||||||| Sbjct: 3917038 ggcggtggcggtggcggatc 3917019
>gb|AE004719.1| Pseudomonas aeruginosa PAO1, section 280 of 529 of the complete genome Length = 10145 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tcgccgacctggaggcggcgg 180 ||||||||||||||||||||| Sbjct: 2006 tcgccgacctggaggcggcgg 1986
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ggcacgccgccgaagaagccg 137 ||||||||||||||||||||| Sbjct: 4086842 ggcacgccgccgaagaagccg 4086862
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgga 29 ||||||||||||||||||||| Sbjct: 33036 gagggcggtggcggtggcgga 33056
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgga 29 ||||||||||||||||||||| Sbjct: 136405 gagggcggtggcggtggcgga 136425
>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F01 Length = 119248 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcctcgtcaactactgcggc 269 ||||||||||||||||||||| Sbjct: 76876 ctcctcgtcaactactgcggc 76896
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcctcgtcaactactgcggc 269 ||||||||||||||||||||| Sbjct: 10522 ctcctcgtcaactactgcggc 10542
>dbj|AK120383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073E06, full insert sequence Length = 588 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgga 29 ||||||||||||||||||||| Sbjct: 388 gagggcggtggcggtggcgga 408
>ref|XM_549848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 160 gagggcggtggcggtggcgg 141
>gb|AF216218.1| Rattus norvegicus orphanin FQ receptor gene (OFQR), complete cds, alternatively spliced Length = 8372 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 6034 caaggccaacatccttggca 6015
>gb|AY116585.1| Sus scrofa inhibin beta B precursor subunit (INHBB) gene, exons 1 and 2, complete cds Length = 6727 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 2518 gagggcggtggcggtggcgg 2537
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 92699 gagggcggtggcggtggcgg 92718
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ggtggcggtggcggatcagg 34 |||||||||||||||||||| Sbjct: 1766490 ggtggcggtggcggatcagg 1766509
>ref|NM_031569.1| Rattus norvegicus opioid receptor-like 1 (Oprl1), mRNA Length = 2706 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1172 caaggccaacatccttggca 1153
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 498 tatgtgtgttgcgtgtacgtatctgtgcgtgt 529 ||||||||||||||||| | ||||||| |||| Sbjct: 175855 tatgtgtgttgcgtgtatgcatctgtgtgtgt 175824
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 agggcggtggcggtggcggatcaggcgg 37 ||||||||||||| || ||||||||||| Sbjct: 23234 agggcggtggcggcgggggatcaggcgg 23261
>gb|AY445095.1| Homo sapiens nitric oxide synthase 1 (neuronal) (NOS1) gene, complete cds Length = 152210 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggc 218 |||||||||||||||||||| Sbjct: 66615 tcaaggccaacatccttggc 66634
>gb|AY152731.1| Rattus norvegicus opioid receptor-like 1 receptor mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1066 caaggccaacatccttggca 1047
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 acctgcagctgggcacgccg 125 |||||||||||||||||||| Sbjct: 4912700 acctgcagctgggcacgccg 4912681
>ref|XM_503036.1| Yarrowia lipolytica CLIB122, YALI0D19536g predicted mRNA Length = 3606 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gtgcacggcgctcaaggcca 207 |||||||||||||||||||| Sbjct: 348 gtgcacggcgctcaaggcca 367
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcacgccgccgaagaagccg 137 |||||||||||||||||||| Sbjct: 2355359 gcacgccgccgaagaagccg 2355340
>emb|AL162718.15| Human DNA sequence from clone RP11-274H24 on chromosome 6, complete sequence Length = 178872 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gccaacatccttggcatcaa 223 |||||||||||||||||||| Sbjct: 152157 gccaacatccttggcatcaa 152138
>emb|AL161727.15| Human DNA sequence from clone RP11-232A1 on chromosome 9 Contains a ribosomal protein S20 (RPS20) pseudogene and a novel pseudogene, complete sequence Length = 160109 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 tgcctgtgcacggcgctcaaggcc 206 |||||||||||||| ||||||||| Sbjct: 141448 tgcctgtgcacggccctcaaggcc 141471
>emb|AL133538.16| Human DNA sequence from clone RP11-550N16 on chromosome 6q26-27 Contains a CpG island, complete sequence Length = 109238 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ttatttgcttcataatttac 465 |||||||||||||||||||| Sbjct: 93007 ttatttgcttcataatttac 93026
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 cacgagggcggtggcggtgg 25 |||||||||||||||||||| Sbjct: 189021 cacgagggcggtggcggtgg 189040
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ctcgccgacctggaggcggcggtg 182 |||||||||||| ||||||||||| Sbjct: 2831885 ctcgccgacctgaaggcggcggtg 2831908
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gtacgtacgtacgcgcatgc 384 |||||||||||||||||||| Sbjct: 44499 gtacgtacgtacgcgcatgc 44518
>emb|AJ243430.1|FRU243430 Fugu rubripes PTPRc gene for CD45, exons 1-30 Length = 12293 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ccatcgtcgtccactgcagg 349 |||||||||||||||||||| Sbjct: 8617 ccatcgtcgtccactgcagg 8636
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cgatcgacgcgctgaagctgggcg 75 |||||| ||||||||||||||||| Sbjct: 562027 cgatcgccgcgctgaagctgggcg 562004
>emb|BX649516.8| Zebrafish DNA sequence from clone DKEY-51D8 in linkage group 14, complete sequence Length = 209974 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 tgcgtgtacgtatctgtgcgtgtg 530 ||||||||||||| |||||||||| Sbjct: 13445 tgcgtgtacgtatatgtgcgtgtg 13468
>gb|AE005912.1| Caulobacter crescentus CB15 section 238 of 359 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 136 cgtgctgcacgctgatccaggggctcgccgac 167 ||||| ||||||||||||||| ||||| |||| Sbjct: 8282 cgtgcggcacgctgatccaggcgctcgtcgac 8313
>gb|DQ427901.1| Sorghum propinquum locus pHER1A01 genomic sequence Length = 389 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgaagaagccgtgctgca 144 |||||||||||||||||||| Sbjct: 165 gccgaagaagccgtgctgca 184
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gctgatccaggggctcgccg 165 |||||||||||||||||||| Sbjct: 2550034 gctgatccaggggctcgccg 2550053
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cgccgacctggaggcggcgg 180 |||||||||||||||||||| Sbjct: 2545 cgccgacctggaggcggcgg 2564
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 125 gccgaagaagccgtgctgcacgctgatc 152 |||||||||||||||| ||||||||||| Sbjct: 265990 gccgaagaagccgtgc-gcacgctgatc 265964
>emb|BX677668.10| Zebrafish DNA sequence from clone CH211-141E20 in linkage group 1, complete sequence Length = 182809 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 acaacaagacaagacccaca 328 |||||||||||||||||||| Sbjct: 164517 acaacaagacaagacccaca 164536
>ref|XM_624188.1| PREDICTED: Apis mellifera similar to spalt (LOC551803), partial mRNA Length = 5449 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 2198 gagggcggtggcggtggcgg 2179
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 atactacgtacgtacgtacg 377 |||||||||||||||||||| Sbjct: 3160441 atactacgtacgtacgtacg 3160460
>gb|AC017095.7| Homo sapiens BAC clone RP11-516C4 from 2, complete sequence Length = 183679 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 acatccttggcatcaacctc 227 |||||||||||||||||||| Sbjct: 104977 acatccttggcatcaacctc 104958
>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence Length = 229269 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 498 tatgtgtgttgcgtgtacgtatctgtgcgtgt 529 ||||||||||||||||| | ||||||| |||| Sbjct: 36419 tatgtgtgttgcgtgtatgcatctgtgtgtgt 36388
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gcgctgaagctgggcgtgtg 79 |||||||||||||||||||| Sbjct: 97729 gcgctgaagctgggcgtgtg 97748
>gb|AE004949.1| Pseudomonas aeruginosa PAO1, section 510 of 529 of the complete genome Length = 11176 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cacggcgctcaaggccaaca 210 |||||||||||||||||||| Sbjct: 7805 cacggcgctcaaggccaaca 7786
>gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 of the complete genome Length = 12460 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 cgtgctgcacgctgatccag 155 |||||||||||||||||||| Sbjct: 1487 cgtgctgcacgctgatccag 1506
>gb|AC068799.14| Homo sapiens 12 BAC RP11-331O1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170249 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tcaaggccaacatccttggc 218 |||||||||||||||||||| Sbjct: 86000 tcaaggccaacatccttggc 86019
>gb|AF115267.1| Rattus norvegicus KOR-3A splice variant mRNA, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1128 caaggccaacatccttggca 1109
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 catgatctacaatccatcca 411 |||||||||||||||||||| Sbjct: 30070 catgatctacaatccatcca 30051
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cgtgctcaacgggctgatca 105 |||||||||||||||||||| Sbjct: 613048 cgtgctcaacgggctgatca 613067
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 gggcggtggcggtggcggatcagg 34 ||||||||||||||| |||||||| Sbjct: 17098 gggcggtggcggtgggggatcagg 17121
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 84368 gagggcggtggcggtggcgg 84387
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 gggcggtggcggtggcggatcagg 34 ||||||||||||||| |||||||| Sbjct: 95822 gggcggtggcggtgggggatcagg 95845
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 atactacgtacgtacgtacg 377 |||||||||||||||||||| Sbjct: 36754 atactacgtacgtacgtacg 36773
>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038I09 Length = 153520 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 atactacgtacgtacgtacg 377 |||||||||||||||||||| Sbjct: 70104 atactacgtacgtacgtacg 70123
>dbj|AK099876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H14, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 216 gagggcggtggcggtggcgg 235
>dbj|AK061314.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C12, full insert sequence Length = 1022 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 160 gagggcggtggcggtggcgg 141
>dbj|AK060084.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F01, full insert sequence Length = 1006 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 258 gagggcggtggcggtggcgg 277
>gb|AF106002.1|AF106002 Pseudomonas putida strain GM73 toluene tolerance protein Ttg2A (ttg2A), toluene tolerance protein Ttg2B (ttg2B), toluene tolerance protein Ttg2C (ttg2C), toluene tolerance protein Ttg2D (ttg2D), toluene tolerance protein Ttg2E (ttg2E), toluene tolerance protein Ttg2F (ttg2F), and UDP-N-acetylglucosamine enolpyruvyl transferase homolog (ttg2G) genes, complete cds Length = 5661 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gtgctcaacgggctgatcaa 106 |||||||||||||||||||| Sbjct: 1954 gtgctcaacgggctgatcaa 1973
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cgatcgacgcgctgaagctgggcg 75 |||||| ||||||||||||||||| Sbjct: 574146 cgatcgccgcgctgaagctgggcg 574123
>dbj|D16438.1|RATRORC Rattus norvegicus ROR-C mRNA for opioid receptor, complete cds Length = 1817 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1118 caaggccaacatccttggca 1099
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgacgcgctgaagctgggcg 75 |||||||||||||||||||| Sbjct: 2187376 cgacgcgctgaagctgggcg 2187357
>gb|L29419.1|RATOPRE Rattus norvegicus opioid receptor mRNA, complete cds Length = 1253 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1201 caaggccaacatccttggca 1182
>gb|L28144.1|RATOPRECEP Rat opioid receptor family mRNA, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1238 caaggccaacatccttggca 1219
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 gggcggtggcggtggcggatcagg 34 |||||||||||| ||||||||||| Sbjct: 79873 gggcggtggcggcggcggatcagg 79850
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gagggcggtggcggtggcgg 28 |||||||||||||||||||| Sbjct: 2852196 gagggcggtggcggtggcgg 2852215
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gtgcacggcgctcaaggcca 207 |||||||||||||||||||| Sbjct: 2471406 gtgcacggcgctcaaggcca 2471425
>gb|U07871.1|RNU07871 Rattus norvegicus Sprague Dawley G protein-coupled receptor mRNA, complete cds Length = 2354 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1097 caaggccaacatccttggca 1078
>gb|L33916.1|RATXOR1A Rattus norvegicus alternatively spliced orphan opiate receptor (XOR1) mRNA, complete cds Length = 2706 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1172 caaggccaacatccttggca 1153
>emb|AL365476.1|LMFLUNK02 Leishmania major Friedlin cosmid clones L8382, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 28334 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cgagggcggtggcggtggcg 27 |||||||||||||||||||| Sbjct: 10765 cgagggcggtggcggtggcg 10746
>gb|U01913.1|RNU01913 Rattus norvegicus Sprague Dawley putative opioid receptor mRNA, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1247 caaggccaacatccttggca 1228
>dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, complete cds Length = 3331 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ggcggtggcggatcaggcgg 37 |||||||||||||||||||| Sbjct: 2156 ggcggtggcggatcaggcgg 2175
>gb|U05239.1|RNU05239 Rattus norvegicus opioid-receptor-like orphan receptor mRNA, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 caaggccaacatccttggca 219 |||||||||||||||||||| Sbjct: 1249 caaggccaacatccttggca 1230 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,417,930 Number of Sequences: 3902068 Number of extensions: 5417930 Number of successful extensions: 113384 Number of sequences better than 10.0: 191 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 108986 Number of HSP's gapped (non-prelim): 4394 length of query: 604 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 581 effective length of database: 17,143,297,704 effective search space: 9960255966024 effective search space used: 9960255966024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
