ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33j20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009547.1| Triticum aestivum clone wr1.pk151.c12:fis, full i... 827 0.0
2dbj|AK063584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 6e-84
3gb|AF090698.1|AF090698 Oryza sativa elicitor-responsive gene-3 (... 319 6e-84
4ref|XM_473277.1| Oryza sativa (japonica cultivar-group), predic... 311 1e-81
5ref|XM_466973.1| Oryza sativa (japonica cultivar-group), mRNA 196 6e-47
6dbj|AK120841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
7gb|AY104832.1| Zea mays PCO094531 mRNA sequence 180 4e-42
8emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 121 3e-24
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
10emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 121 3e-24
11dbj|AB060729.1| Oryza sativa (japonica cultivar-group) gene for ... 121 3e-24
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
13dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
14gb|AY106647.1| Zea mays PCO065540 mRNA sequence 101 3e-18
15emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 54 6e-04
16dbj|AK070539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
17emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 54 6e-04
18gb|BT009577.1| Triticum aestivum clone wre1n.pk0035.f6:fis, full... 52 0.002
19ref|XM_474394.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
20gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-1... 46 0.13
21gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell P... 44 0.53
22gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC... 42 2.1
23gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 42 2.1
24ref|XM_842911.1| Leishmania major strain Friedlin cysteine pepti... 42 2.1
25emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085... 42 2.1
26gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosom... 42 2.1
27dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 2.1
28emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.1
29gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 2.1
30emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 42 2.1
31gb|AY051292.1| Hepatitis C virus (isolate India) polyprotein mRN... 42 2.1
32gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 40 8.3
33ref|XM_381867.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.3
34gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosom... 40 8.3
35gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome... 40 8.3
36gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 8.3
37emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 8.3
38emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 40 8.3
39emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, ... 40 8.3
40emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, B... 40 8.3
41gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.3
42gb|AC158371.2| Pan troglodytes BAC clone CH251-423C22 from chrom... 40 8.3
43gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, comple... 40 8.3
44gb|AC010138.6| Homo sapiens BAC clone RP11-175H4 from 2, complet... 40 8.3
45gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.3
46emb|Y13797.1|PAPHYTOCH Platycerium angolense phytochrome gene (p... 40 8.3
47emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, B... 40 8.3
48emb|AL445886.3|CNS07EET Human chromosome 14 DNA sequence BAC R-3... 40 8.3
49gb|AY108665.1| Zea mays PCO079133 mRNA sequence 40 8.3
50gb|AF152601.1|AF152601 Zea mays unknown mRNA 40 8.3
51gb|U64437.1|ZMU64437 Zea mays novel protein mRNA, complete cds 40 8.3
52gb|AC170421.7| Rhesus Macaque 14 BAC CH250-340G19 (Children's Ho... 40 8.3
53emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chr... 40 8.3
54emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-5... 40 8.3 
>gb|BT009547.1| Triticum aestivum clone wr1.pk151.c12:fis, full insert mRNA
           sequence
          Length = 874

 Score =  827 bits (417), Expect = 0.0
 Identities = 504/533 (94%)
 Strand = Plus / Plus

                                                                       
Query: 68  gaaggcgagatcagaccaggagagaagatggcgcaggggacgctggaggtgctgctcgtc 127
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 152 gaaggcgagatcaggccgggagagaagatggcgcaggggacgctggaggtgctgctcgtg 211

                                                                       
Query: 128 ggagccaagggcctcgagaacaccgactacctctgcaacatggacccgtacgcggttctg 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 212 ggagccaagggcctcgagaacaccgactacctctgcaacatggacccgtacgcggttcta 271

                                                                       
Query: 188 agatgcacctcgcaggagcagaagagcaccgtcgcctcaggaaagggaagtgaccctgaa 247
           | |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 272 aaatgcacctcgcaggagcaaaagagcaccgtcgcctctggaaagggaagtgatcctgag 331

                                                                       
Query: 248 tggaacgaaacctttgtgttcaccgtctctgagaacgcacgcgagctcgtcatcaagctc 307
           ||||||||||||||||||||||||||||||||||| |||   ||||| ||||||||||| 
Sbjct: 332 tggaacgaaacctttgtgttcaccgtctctgagaatgcaactgagcttgtcatcaagcta 391

                                                                       
Query: 308 ctcgacagtgatggtggcacggaagatgacagcgttggtgaagcaacgatcccattggat 367
           || |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 392 ctggacagtgatggtggcacggacgacgacagcgttggtgaagcaacgatcccattggat 451

                                                                       
Query: 368 ggagtgtatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagag 427
           |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 452 ggagtgtacactgaaggaagcatcccaccaactgtttacaatgttgtcaaagacgaagag 511

                                                                       
Query: 428 taccgtggagaaatcaaaatcggtctgacgttcactccggaggaggctcgggatgaggat 487
           |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 512 taccgtggagaaatcaaaattggtctgacgttcactccggaggaggctcgtgatcaggat 571

                                                                       
Query: 488 caacccgaggaaaactatggtgggtggaaccagtcatcttgagaagaagcggatgttttg 547
           |||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||||
Sbjct: 572 caacccgaggaaaactatggtgggtggaaccaatcatcttgagaagaagcaggtgctttg 631

                                                                
Query: 548 ctgagctatggtgcgtgacaagtcgtgtgctagaactaaagcttattttaatt 600
           |||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 632 ctgaactatggtgcgtgacaagtcgtgtgctagaactaaagcctattttaatt 684
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>dbj|AK063584.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A01, full
           insert sequence
          Length = 760

 Score =  319 bits (161), Expect = 6e-84
 Identities = 326/381 (85%)
 Strand = Plus / Plus

                                                                       
Query: 91  gaagatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacac 150
           |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 87  gaagatggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacac 146

                                                                       
Query: 151 cgactacctctgcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaa 210
           ||||||||| |||||||||||||||||||||||||| | ||||  |||||||||||||||
Sbjct: 147 cgactacctgtgcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaa 206

                                                                       
Query: 211 gagcaccgtcgcctcaggaaagggaagtgaccctgaatggaacgaaacctttgtgttcac 270
           ||||| ||| || ||||| || |||  ||||||||||||||||||||||||| |||||| 
Sbjct: 207 gagcagcgttgcgtcaggtaaaggatctgaccctgaatggaacgaaacctttatgttcag 266

                                                                       
Query: 271 cgtctctgagaacgcacgcgagctcgtcatcaagctcctcgacagtgatggtggcacgga 330
           |||| || | |||||    |||||| |||||||| |  | ||||||||  ||||||||||
Sbjct: 267 cgtcactcacaacgctacagagctcatcatcaagttgatggacagtgacagtggcacgga 326

                                                                       
Query: 331 agatgacagcgttggtgaagcaacgatcccattggatggagtgtatactgaaggaagcat 390
            |||||    ||||| |||||||||||  | ||||| | | | ||||| |||||||||||
Sbjct: 327 tgatgattttgttggagaagcaacgatttctttggaagcaatctatacagaaggaagcat 386

                                                                       
Query: 391 cccaccaactgtttacaatgttgtcaaggacgaagagtaccgtggagaaatcaaaatcgg 450
            || ||||||||||| |||||||| || || ||||| |||||||||||||||||| | ||
Sbjct: 387 acccccaactgtttataatgttgtgaaagaagaagaataccgtggagaaatcaaagtggg 446

                                
Query: 451 tctgacgttcactccggagga 471
            |||||||||||||| |||||
Sbjct: 447 cctgacgttcactccagagga 467
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>gb|AF090698.1|AF090698 Oryza sativa elicitor-responsive gene-3 (ERG3) mRNA, complete cds
          Length = 710

 Score =  319 bits (161), Expect = 6e-84
 Identities = 326/381 (85%)
 Strand = Plus / Plus

                                                                       
Query: 91  gaagatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacac 150
           |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 20  gaagatggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacac 79

                                                                       
Query: 151 cgactacctctgcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaa 210
           ||||||||| |||||||||||||||||||||||||| | ||||  |||||||||||||||
Sbjct: 80  cgactacctgtgcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaa 139

                                                                       
Query: 211 gagcaccgtcgcctcaggaaagggaagtgaccctgaatggaacgaaacctttgtgttcac 270
           ||||| ||| || ||||| || |||  ||||||||||||||||||||||||| |||||| 
Sbjct: 140 gagcagcgttgcgtcaggtaaaggatctgaccctgaatggaacgaaacctttatgttcag 199

                                                                       
Query: 271 cgtctctgagaacgcacgcgagctcgtcatcaagctcctcgacagtgatggtggcacgga 330
           |||| || | |||||    |||||| |||||||| |  | ||||||||  ||||||||||
Sbjct: 200 cgtcactcacaacgctacagagctcatcatcaagttgatggacagtgacagtggcacgga 259

                                                                       
Query: 331 agatgacagcgttggtgaagcaacgatcccattggatggagtgtatactgaaggaagcat 390
            |||||    ||||| |||||||||||  | ||||| | | | ||||| |||||||||||
Sbjct: 260 tgatgattttgttggagaagcaacgatttctttggaagcaatctatacagaaggaagcat 319

                                                                       
Query: 391 cccaccaactgtttacaatgttgtcaaggacgaagagtaccgtggagaaatcaaaatcgg 450
            || ||||||||||| |||||||| || || ||||| |||||||||||||||||| | ||
Sbjct: 320 acccccaactgtttataatgttgtgaaagaagaagaataccgtggagaaatcaaagtggg 379

                                
Query: 451 tctgacgttcactccggagga 471
            |||||||||||||| |||||
Sbjct: 380 cctgacgttcactccagagga 400
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>ref|XM_473277.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 435

 Score =  311 bits (157), Expect = 1e-81
 Identities = 322/377 (85%)
 Strand = Plus / Plus

                                                                       
Query: 95  atggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccgac 154
           |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacaccgac 60

                                                                       
Query: 155 tacctctgcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaagagc 214
           ||||| |||||||||||||||||||||||||| | ||||  |||||||||||||||||||
Sbjct: 61  tacctgtgcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaagagc 120

                                                                       
Query: 215 accgtcgcctcaggaaagggaagtgaccctgaatggaacgaaacctttgtgttcaccgtc 274
           | ||| || ||||| || |||  ||||||||||||||||||||||||| |||||| ||||
Sbjct: 121 agcgttgcgtcaggtaaaggatctgaccctgaatggaacgaaacctttatgttcagcgtc 180

                                                                       
Query: 275 tctgagaacgcacgcgagctcgtcatcaagctcctcgacagtgatggtggcacggaagat 334
            || | |||||    |||||| |||||||| |  | ||||||||  |||||||||| |||
Sbjct: 181 actcacaacgctacagagctcatcatcaagttgatggacagtgacagtggcacggatgat 240

                                                                       
Query: 335 gacagcgttggtgaagcaacgatcccattggatggagtgtatactgaaggaagcatccca 394
           ||    ||||| |||||||||||  | ||||| | | | ||||| ||||||||||| || 
Sbjct: 241 gattttgttggagaagcaacgatttctttggaagcaatctatacagaaggaagcataccc 300

                                                                       
Query: 395 ccaactgtttacaatgttgtcaaggacgaagagtaccgtggagaaatcaaaatcggtctg 454
           ||||||||||| |||||||| || || ||||| |||||||||||||||||| | || |||
Sbjct: 301 ccaactgtttataatgttgtgaaagaagaagaataccgtggagaaatcaaagtgggcctg 360

                            
Query: 455 acgttcactccggagga 471
           ||||||||||| |||||
Sbjct: 361 acgttcactccagagga 377
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>ref|XM_466973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 827

 Score =  196 bits (99), Expect = 6e-47
 Identities = 309/379 (81%)
 Strand = Plus / Plus

                                                                       
Query: 93  agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
           |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 93  agatggtgcacgggacgctggaggtgctgctcgtcggggccaagggcctcgagaacaccg 152

                                                                       
Query: 153 actacctctgcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaaga 212
           | ||||| ||||||||||| || || ||  |||| |  |||   || ||||||||||  |
Sbjct: 153 attacctgtgcaacatggatccatatgcaattctcaagtgccgttcacaggagcagagaa 212

                                                                       
Query: 213 gcaccgtcgcctcaggaaagggaagtgaccctgaatggaacgaaacctttgtgttcaccg 272
           ||| | | || ||||| || |||||| |||||||||||||||||| |||||| |||||||
Sbjct: 213 gcagcatagcatcaggcaaaggaagtaaccctgaatggaacgaaaactttgtcttcaccg 272

                                                                       
Query: 273 tctctgagaacgcacgcgagctcgtcatcaagctcctcgacagtgatggtggcacggaag 332
           | ||||| || ||    |||||  | ||||||||| | |||||||||  |||| | |  |
Sbjct: 273 tgtctgacaaagctacagagctgttgatcaagctcttggacagtgatactggctcagccg 332

                                                                       
Query: 333 atgacagcgttggtgaagcaacgatcccattggatggagtgtatactgaaggaagcatcc 392
           | |||   ||||||||||||||||| || ||||| | ||||||||||||||| || || |
Sbjct: 333 acgactttgttggtgaagcaacgattcctttggaagcagtgtatactgaagggagtattc 392

                                                                       
Query: 393 caccaactgtttacaatgttgtcaaggacgaagagtaccgtggagaaatcaaaatcggtc 452
           |||||||| | || |||||||| ||||| ||| | ||| |||||||||||||| |||| |
Sbjct: 393 caccaactctgtataatgttgtgaaggatgaacattactgtggagaaatcaaagtcggcc 452

                              
Query: 453 tgacgttcactccggagga 471
           | || |||||||| |||||
Sbjct: 453 tcacattcactcctgagga 471
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>dbj|AK120841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G19, full
           insert sequence
          Length = 827

 Score =  188 bits (95), Expect = 1e-44
 Identities = 308/379 (81%)
 Strand = Plus / Plus

                                                                       
Query: 93  agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
           |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 93  agatggtgcacgggacgctggaggtgctgctcgtcggggccaagggcctcgagaacaccg 152

                                                                       
Query: 153 actacctctgcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaaga 212
           | ||||| ||||||||||| || || ||  |||| |  |||   || ||||||||||  |
Sbjct: 153 attacctgtgcaacatggatccatatgcaattctcaagtgccgttcacaggagcagagaa 212

                                                                       
Query: 213 gcaccgtcgcctcaggaaagggaagtgaccctgaatggaacgaaacctttgtgttcaccg 272
           ||| | | || ||||| || || ||| |||||||||||||||||| |||||| |||||||
Sbjct: 213 gcagcatagcatcaggcaaagggagtaaccctgaatggaacgaaaactttgtcttcaccg 272

                                                                       
Query: 273 tctctgagaacgcacgcgagctcgtcatcaagctcctcgacagtgatggtggcacggaag 332
           | ||||| || ||    |||||  | ||||||||| | |||||||||  |||| | |  |
Sbjct: 273 tgtctgacaaagctacagagctgttgatcaagctcttggacagtgatactggctcagccg 332

                                                                       
Query: 333 atgacagcgttggtgaagcaacgatcccattggatggagtgtatactgaaggaagcatcc 392
           | |||   ||||||||||||||||| || ||||| | ||||||||||||||| || || |
Sbjct: 333 acgactttgttggtgaagcaacgattcctttggaagcagtgtatactgaagggagtattc 392

                                                                       
Query: 393 caccaactgtttacaatgttgtcaaggacgaagagtaccgtggagaaatcaaaatcggtc 452
           |||||||| | || |||||||| ||||| ||| | ||| |||||||||||||| |||| |
Sbjct: 393 caccaactctgtataatgttgtgaaggatgaacattactgtggagaaatcaaagtcggcc 452

                              
Query: 453 tgacgttcactccggagga 471
           | || |||||||| |||||
Sbjct: 453 tcacattcactcctgagga 471
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>gb|AY104832.1| Zea mays PCO094531 mRNA sequence
          Length = 1086

 Score =  180 bits (91), Expect = 4e-42
 Identities = 199/235 (84%)
 Strand = Plus / Plus

                                                                       
Query: 93  agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
           |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 232 agatggcgcaggggacgctggaggtgcttctcgtcggagccaggggcctcgagaacaccg 291

                                                                       
Query: 153 actacctctgcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaaga 212
           | |||||  ||||||||||||| |||||| |||||  |||   ||| || ||||||||||
Sbjct: 292 attacctgagcaacatggacccctacgcgcttctgcaatgtcgctcccacgagcagaaga 351

                                                                       
Query: 213 gcaccgtcgcctcaggaaagggaagtgaccctgaatggaacgaaacctttgtgttcaccg 272
           ||| |||||| || || || ||  |||| ||||| |||||||| ||||| ||||||||||
Sbjct: 352 gcagcgtcgcatctggcaaaggctgtgaacctgagtggaacgagaccttcgtgttcaccg 411

                                                                  
Query: 273 tctctgagaacgcacgcgagctcgtcatcaagctcctcgacagtgatggtggcac 327
           |||| ||   ||||   |||||  ||||||||||||| |||||||| ||||||||
Sbjct: 412 tctccgatggcgcagcagagctgttcatcaagctcctggacagtgacggtggcac 466



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 380 gaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagtaccgtggagaa 439
           ||||||| |||||| || ||||||||||||||||| || |||||||| ||||| ||||||
Sbjct: 689 gaaggaaacatccctccgactgtttacaatgttgtgaaagacgaagaataccgcggagaa 748

                                           
Query: 440 atcaaaatcggtctgacgttcactccggagga 471
           |||||| | || || ||||||||||| |||||
Sbjct: 749 atcaaagttggcctcacgttcactccagagga 780
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>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
             complete sequence
          Length = 140454

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                         
Query: 91    gaagatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacac 150
             |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 69369 gaagatggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacac 69428

                      
Query: 151   cgactacct 159
             |||||||||
Sbjct: 69429 cgactacct 69437



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                         
Query: 374   tatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagtaccgt 433
             ||||| ||||||||||| || ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 70766 tatacagaaggaagcatacccccaactgtttataatgttgtgaaagaagaagaataccgt 70825

                                                  
Query: 434   ggagaaatcaaaatcggtctgacgttcactccggagg 470
             |||||||||||| | || |||||||||||||| ||||
Sbjct: 70826 ggagaaatcaaagtgggcctgacgttcactccagagg 70862



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 162   gcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaagagcaccgtcg 221
             ||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||| |
Sbjct: 69618 gcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaagagcagcgttg 69677

                    
Query: 222   cctcagg 228
             | |||||
Sbjct: 69678 cgtcagg 69684



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                         
Query: 238   tgaccctgaatggaacgaaacctttgtgttcaccgtctctgagaacgcacgcgagctcgt 297
             ||||||||||||||||||||||||| |||||| |||| || | |||||    |||||| |
Sbjct: 70336 tgaccctgaatggaacgaaacctttatgttcagcgtcactcacaacgctacagagctcat 70395

                                                    
Query: 298   catcaagctcctcgacagtgatggtggcacggaagatga 336
             ||||||| |  | ||||||||  |||||||||| |||||
Sbjct: 70396 catcaagttgatggacagtgacagtggcacggatgatga 70434
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                            
Query: 91       gaagatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacac 150
                |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 26532483 gaagatggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacac 26532542

                         
Query: 151      cgactacct 159
                |||||||||
Sbjct: 26532543 cgactacct 26532551



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                            
Query: 374      tatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagtaccgt 433
                ||||| ||||||||||| || ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 26533880 tatacagaaggaagcatacccccaactgtttataatgttgtgaaagaagaagaataccgt 26533939

                                                     
Query: 434      ggagaaatcaaaatcggtctgacgttcactccggagg 470
                |||||||||||| | || |||||||||||||| ||||
Sbjct: 26533940 ggagaaatcaaagtgggcctgacgttcactccagagg 26533976



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 162      gcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaagagcaccgtcg 221
                ||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||| |
Sbjct: 26532732 gcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaagagcagcgttg 26532791

                       
Query: 222      cctcagg 228
                | |||||
Sbjct: 26532792 cgtcagg 26532798



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                            
Query: 238      tgaccctgaatggaacgaaacctttgtgttcaccgtctctgagaacgcacgcgagctcgt 297
                ||||||||||||||||||||||||| |||||| |||| || | |||||    |||||| |
Sbjct: 26533450 tgaccctgaatggaacgaaacctttatgttcagcgtcactcacaacgctacagagctcat 26533509

                                                       
Query: 298      catcaagctcctcgacagtgatggtggcacggaagatga 336
                ||||||| |  | ||||||||  |||||||||| |||||
Sbjct: 26533510 catcaagttgatggacagtgacagtggcacggatgatga 26533548



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 93       agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
                |||||| ||| |||| ||||||||| || |||||| | ||||||||||||||| |||| |
Sbjct: 34859665 agatggtgcacgggaagctggaggtcctcctcgtctgcgccaagggcctcgaggacactg 34859724

                   
Query: 153      act 155
                |||
Sbjct: 34859725 act 34859727



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 233      ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctc 276
                ||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 34860572 ggaagcgagcctgaatggaacgagaccttcgtcttcaccgtctc 34860615
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>emb|AL442109.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B1011H02, complete
             sequence
          Length = 40167

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                         
Query: 91    gaagatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacac 150
             |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 31293 gaagatggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacac 31352

                      
Query: 151   cgactacct 159
             |||||||||
Sbjct: 31353 cgactacct 31361



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                         
Query: 374   tatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagtaccgt 433
             ||||| ||||||||||| || ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 32690 tatacagaaggaagcatacccccaactgtttataatgttgtgaaagaagaagaataccgt 32749

                                                  
Query: 434   ggagaaatcaaaatcggtctgacgttcactccggagg 470
             |||||||||||| | || |||||||||||||| ||||
Sbjct: 32750 ggagaaatcaaagtgggcctgacgttcactccagagg 32786



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 162   gcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaagagcaccgtcg 221
             ||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||| |
Sbjct: 31542 gcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaagagcagcgttg 31601

                    
Query: 222   cctcagg 228
             | |||||
Sbjct: 31602 cgtcagg 31608



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                         
Query: 238   tgaccctgaatggaacgaaacctttgtgttcaccgtctctgagaacgcacgcgagctcgt 297
             ||||||||||||||||||||||||| |||||| |||| || | |||||    |||||| |
Sbjct: 32260 tgaccctgaatggaacgaaacctttatgttcagcgtcactcacaacgctacagagctcat 32319

                                                    
Query: 298   catcaagctcctcgacagtgatggtggcacggaagatga 336
             ||||||| |  | ||||||||  |||||||||| |||||
Sbjct: 32320 catcaagttgatggacagtgacagtggcacggatgatga 32358
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>dbj|AB060729.1| Oryza sativa (japonica cultivar-group) gene for RPP16, complete cds
          Length = 3713

 Score =  121 bits (61), Expect = 3e-24
 Identities = 67/69 (97%)
 Strand = Plus / Plus

                                                                        
Query: 91   gaagatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacac 150
            |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 gaagatggtgcaggggacgctcgaggtgctgctcgtcggagccaagggcctcgagaacac 1416

                     
Query: 151  cgactacct 159
            |||||||||
Sbjct: 1417 cgactacct 1425



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                        
Query: 374  tatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagtaccgt 433
            ||||| ||||||||||| || ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 2754 tatacagaaggaagcatacccccaactgtttataatgttgtgaaagaagaagaataccgt 2813

                                                 
Query: 434  ggagaaatcaaaatcggtctgacgttcactccggagg 470
            |||||||||||| | || |||||||||||||| ||||
Sbjct: 2814 ggagaaatcaaagtgggcctgacgttcactccagagg 2850



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                        
Query: 162  gcaacatggacccgtacgcggttctgagatgcacctcgcaggagcagaagagcaccgtcg 221
            ||||||||||||||||||||||||| | ||||  |||||||||||||||||||| ||| |
Sbjct: 1606 gcaacatggacccgtacgcggttctcaaatgccgctcgcaggagcagaagagcagcgttg 1665

                   
Query: 222  cctcagg 228
            | |||||
Sbjct: 1666 cgtcagg 1672



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                        
Query: 238  tgaccctgaatggaacgaaacctttgtgttcaccgtctctgagaacgcacgcgagctcgt 297
            ||||||||||||||||||||||||| |||||| |||| || | |||||    |||||| |
Sbjct: 2324 tgaccctgaatggaacgaaacctttatgttcagcgtcactcacaacgctacagagctcat 2383

                                                   
Query: 298  catcaagctcctcgacagtgatggtggcacggaagatga 336
            ||||||| |  | ||||||||  |||||||||| |||||
Sbjct: 2384 catcaagttgatggacagtgacagtggcacggatgatga 2422
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                            
Query: 93       agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
                |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 25702629 agatggtgcacgggacgctggaggtgctgctcgtcggggccaagggcctcgagaacaccg 25702688

                       
Query: 153      actacct 159
                | |||||
Sbjct: 25702689 attacct 25702695



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                            
Query: 370      agtgtatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagta 429
                ||||||||||||||| || || ||||||||| | || |||||||| ||||| ||| | ||
Sbjct: 25704251 agtgtatactgaagggagtattccaccaactctgtataatgttgtgaaggatgaacatta 25704310

                                                         
Query: 430      ccgtggagaaatcaaaatcggtctgacgttcactccggagg 470
                | |||||||||||||| |||| || || |||||||| ||||
Sbjct: 25704311 ctgtggagaaatcaaagtcggcctcacattcactcctgagg 25704351



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 233      ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctctga 279
                |||||| |||||||||||||||||| |||||| |||||||| |||||
Sbjct: 25703971 ggaagtaaccctgaatggaacgaaaactttgtcttcaccgtgtctga 25704017
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>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0010C01
          Length = 186185

 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                          
Query: 93     agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
              |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 105305 agatggtgcacgggacgctggaggtgctgctcgtcggggccaagggcctcgagaacaccg 105364

                     
Query: 153    actacct 159
              | |||||
Sbjct: 105365 attacct 105371



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                          
Query: 370    agtgtatactgaaggaagcatcccaccaactgtttacaatgttgtcaaggacgaagagta 429
              ||||||||||||||| || || ||||||||| | || |||||||| ||||| ||| | ||
Sbjct: 106927 agtgtatactgaagggagtattccaccaactctgtataatgttgtgaaggatgaacatta 106986

                                                       
Query: 430    ccgtggagaaatcaaaatcggtctgacgttcactccggagg 470
              | |||||||||||||| |||| || || |||||||| ||||
Sbjct: 106987 ctgtggagaaatcaaagtcggcctcacattcactcctgagg 107027



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 233    ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctctga 279
              |||||| |||||||||||||||||| |||||| |||||||| |||||
Sbjct: 106647 ggaagtaaccctgaatggaacgaaaactttgtcttcaccgtgtctga 106693
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>gb|AY106647.1| Zea mays PCO065540 mRNA sequence
          Length = 1082

 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                       
Query: 95  atggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccgac 154
           |||| ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||| 
Sbjct: 277 atggtgcacgggacgctggaagtgctgctcgttggggccaagggcctcgagaacaccgat 336

                                  
Query: 155 tacctctgcaacatggacccgta 177
           |||||||| |||||||| |||||
Sbjct: 337 tacctctgtaacatggatccgta 359



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 341 gttggtgaagcaacgatcccattggatggagtgtatactgaaggaagcatcccaccaac 399
           ||||||||||||||||| |||||||| | ||||||||||||| | ||||| ||||||||
Sbjct: 523 gttggtgaagcaacgattccattggaagcagtgtatactgaaaggagcattccaccaac 581
to top
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 93    agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
             |||||| ||| |||| ||||||||| || |||||| | ||||||||||||||| |||| |
Sbjct: 65778 agatggtgcacgggaagctggaggtcctcctcgtctgcgccaagggcctcgaggacactg 65837

                
Query: 153   act 155
             |||
Sbjct: 65838 act 65840



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 233   ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctc 276
             ||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 66685 ggaagcgagcctgaatggaacgagaccttcgtcttcaccgtctc 66728
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>dbj|AK070539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060G05, full
           insert sequence
          Length = 699

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 93  agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
           |||||| ||| |||| ||||||||| || |||||| | ||||||||||||||| |||| |
Sbjct: 38  agatggtgcacgggaagctggaggtcctcctcgtctgcgccaagggcctcgaggacactg 97

              
Query: 153 act 155
           |||
Sbjct: 98  act 100



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 233 ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctc 276
           ||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 178 ggaagcgagcctgaatggaacgagaccttcgtcttcaccgtctc 221
to top
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 93    agatggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccg 152
             |||||| ||| |||| ||||||||| || |||||| | ||||||||||||||| |||| |
Sbjct: 39312 agatggtgcacgggaagctggaggtcctcctcgtctgcgccaagggcctcgaggacactg 39371

                
Query: 153   act 155
             |||
Sbjct: 39372 act 39374



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 233   ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctc 276
             ||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 40220 ggaagcgagcctgaatggaacgagaccttcgtcttcaccgtctc 40263
to top
>gb|BT009577.1| Triticum aestivum clone wre1n.pk0035.f6:fis, full insert mRNA
           sequence
          Length = 695

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 203 gagcagaagagcaccgtcgcctcaggaaagggaagtgaccctgaatggaacgaaaccttt 262
           |||||||||||||||||||| ||||||   || || || ||||| |||||||| ||||| 
Sbjct: 171 gagcagaagagcaccgtcgcatcaggagcagggagcgagcctgagtggaacgagaccttc 230

                         
Query: 263 gtgttcaccgtctc 276
           || ||| |||||||
Sbjct: 231 gtcttcgccgtctc 244



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 104 gggacgctggaggtgctgctcgtcggagccaagggcctcga 144
           |||| |||||||||||||||||||   ||||||||||||||
Sbjct: 72  gggaagctggaggtgctgctcgtctccgccaagggcctcga 112
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>ref|XM_474394.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 438

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 95  atggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccgac 154
           |||| ||| |||| ||||||||| || |||||| | ||||||||||||||| |||| |||
Sbjct: 1   atggtgcacgggaagctggaggtcctcctcgtctgcgccaagggcctcgaggacactgac 60

            
Query: 155 t 155
           |
Sbjct: 61  t 61



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 233 ggaagtgaccctgaatggaacgaaacctttgtgttcaccgtctc 276
           ||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 139 ggaagcgagcctgaatggaacgagaccttcgtcttcaccgtctc 182
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>gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-11g7, complete sequence
          Length = 105682

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 361   attggatggagtgtatactgaaggaag 387
             |||||||||||| ||||||||||||||
Sbjct: 16366 attggatggagtttatactgaaggaag 16340
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>gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167041

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 74    gagatcagaccaggagagaaga 95
             ||||||||||||||||||||||
Sbjct: 93268 gagatcagaccaggagagaaga 93289
to top
>gb|AF384675.1| Mus musculus FGF15 (Fgf15) gene, complete cds; BC1 scRNA gene, complete
             sequence; hypothetical protein and cyclin D1 (Ccnd1)
             genes, complete cds
          Length = 154480

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 588   gcttattttaattctttttaa 608
             |||||||||||||||||||||
Sbjct: 24594 gcttattttaattctttttaa 24574
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 276    ctgagaacgcacgcgagctcg 296
              |||||||||||||||||||||
Sbjct: 168478 ctgagaacgcacgcgagctcg 168498
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>ref|XM_842911.1| Leishmania major strain Friedlin cysteine peptidase, clan CA, family
            C2 (LMJ_0306) partial mRNA
          Length = 18495

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 276  ctgagaacgcacgcgagctcg 296
            |||||||||||||||||||||
Sbjct: 3593 ctgagaacgcacgcgagctcg 3613
to top
>emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085F17 on chromosome 20q11.1-11.23
             Contains the DNMT3B gene encoding DNA Cytosine-5
             Methyltransferase 3 beta, the MAPRE1 gene encoding a
             microtubule-associated protein, RP/EB family, member 1,
             part of a novel gene, ESTs, STSs, GSSs, and three CpG
             islands, complete sequence
          Length = 118899

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    gagatcagaccaggagagaag 94
             |||||||||||||||||||||
Sbjct: 46727 gagatcagaccaggagagaag 46707
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>gb|AC161763.3| Mus musculus BAC clone RP23-294B14 from chromosome 7, complete sequence
          Length = 221679

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 588    gcttattttaattctttttaa 608
              |||||||||||||||||||||
Sbjct: 106298 gcttattttaattctttttaa 106318
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 121    gctcgtcggagccaagggcctcgag 145
              ||||||||||||| |||||||||||
Sbjct: 674486 gctcgtcggagcccagggcctcgag 674510
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 108    cgctggaggtgctgctcgtcg 128
              |||||||||||||||||||||
Sbjct: 240601 cgctggaggtgctgctcgtcg 240581
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 121    gctcgtcggagccaagggcctcgag 145
              ||||||||||||| |||||||||||
Sbjct: 345125 gctcgtcggagcccagggcctcgag 345149
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>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 540   atgttttgctgagctatggtg 560
             |||||||||||||||||||||
Sbjct: 81494 atgttttgctgagctatggtg 81514
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>gb|AY051292.1| Hepatitis C virus (isolate India) polyprotein mRNA, complete cds
          Length = 9441

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 313  cagtgatggtggcacggaaga 333
            |||||||||||||||||||||
Sbjct: 7568 cagtgatggtggcacggaaga 7588
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>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   agcttattttaattcttttt 606
             ||||||||||||||||||||
Sbjct: 82061 agcttattttaattcttttt 82080
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>ref|XM_381867.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01691.1)
           partial mRNA
          Length = 1977

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  ggcgagatcagaccaggaga 90
           ||||||||||||||||||||
Sbjct: 410 ggcgagatcagaccaggaga 391
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>gb|AC132221.3| Mus musculus BAC clone RP24-545C12 from chromosome 12, complete
             sequence
          Length = 198084

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   agcttattttaattcttttt 606
             ||||||||||||||||||||
Sbjct: 17459 agcttattttaattcttttt 17440
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>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence
          Length = 165307

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   tccggaggaggctcgggatg 482
             ||||||||||||||||||||
Sbjct: 78120 tccggaggaggctcgggatg 78139
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      gagttgggtgggcgaaggcg 74
               ||||||||||||||||||||
Sbjct: 3188466 gagttgggtgggcgaaggcg 3188447
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    tcgcaggagcagaagagcac 216
              ||||||||||||||||||||
Sbjct: 278499 tcgcaggagcagaagagcac 278480
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 291    agctcgtcatcaagctcctc 310
              ||||||||||||||||||||
Sbjct: 134369 agctcgtcatcaagctcctc 134350
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>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54
          Length = 198715

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   agctcgtcatcaagctcctc 310
             ||||||||||||||||||||
Sbjct: 23142 agctcgtcatcaagctcctc 23123
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>emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, BAC clone T13K14 (ESSA project)
          Length = 91570

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   agctcgtcatcaagctcctc 310
             ||||||||||||||||||||
Sbjct: 50664 agctcgtcatcaagctcctc 50645
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 428     taccgtggagaaatcaaaatcggtctga 455
               |||||||||||||||||| ||| |||||
Sbjct: 1582215 taccgtggagaaatcaaagtcgttctga 1582242
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>gb|AC158371.2| Pan troglodytes BAC clone CH251-423C22 from chromosome unknown, complete
              sequence
          Length = 154709

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    gaaagggaagtgaccctgaa 247
              ||||||||||||||||||||
Sbjct: 144334 gaaagggaagtgaccctgaa 144353
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>gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, complete sequence
          Length = 196622

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    cttattttaattctttttaa 608
              ||||||||||||||||||||
Sbjct: 164450 cttattttaattctttttaa 164431
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>gb|AC010138.6| Homo sapiens BAC clone RP11-175H4 from 2, complete sequence
          Length = 160970

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 589  cttattttaattctttttaa 608
            ||||||||||||||||||||
Sbjct: 2536 cttattttaattctttttaa 2517
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      ggcgcaggggacgctggagg 116
               ||||||||||||||||||||
Sbjct: 2027222 ggcgcaggggacgctggagg 2027203
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>emb|Y13797.1|PAPHYTOCH Platycerium angolense phytochrome gene (partial)
          Length = 572

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 345 gtgaagcaacgatcccattg 364
           ||||||||||||||||||||
Sbjct: 273 gtgaagcaacgatcccattg 254
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>emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, BAC clone T10C21
          Length = 77860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   agctcgtcatcaagctcctc 310
             ||||||||||||||||||||
Sbjct: 33253 agctcgtcatcaagctcctc 33234
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>emb|AL445886.3|CNS07EET Human chromosome 14 DNA sequence BAC R-369B6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167398

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    gaaagggaagtgaccctgaa 247
              ||||||||||||||||||||
Sbjct: 103430 gaaagggaagtgaccctgaa 103411
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>gb|AY108665.1| Zea mays PCO079133 mRNA sequence
          Length = 777

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 245 gaatggaacgaaacctttgtgttcaccgtctc 276
           ||||||||||| ||||| || |||||||||||
Sbjct: 287 gaatggaacgagaccttcgtcttcaccgtctc 318



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 95  atggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccgac 154
           |||| ||| |||| ||||||||| || ||||||   |||||||| |||||| ||||||| 
Sbjct: 137 atggtgcacgggaagctggaggtcctcctcgtctccgccaagggactcgaggacaccgat 196

                               
Query: 155 tacctctgcaacatggaccc 174
           | ||||   |||||||||||
Sbjct: 197 ttcctcaataacatggaccc 216
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>gb|AF152601.1|AF152601 Zea mays unknown mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 245 gaatggaacgaaacctttgtgttcaccgtctc 276
           ||||||||||| ||||| || |||||||||||
Sbjct: 266 gaatggaacgagaccttcgtcttcaccgtctc 297
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>gb|U64437.1|ZMU64437 Zea mays novel protein mRNA, complete cds
          Length = 737

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 245 gaatggaacgaaacctttgtgttcaccgtctc 276
           ||||||||||| ||||| || |||||||||||
Sbjct: 271 gaatggaacgagaccttcgtcttcaccgtctc 302



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 95  atggcgcaggggacgctggaggtgctgctcgtcggagccaagggcctcgagaacaccgac 154
           |||| ||| |||| ||||||||| || ||||||   |||||||| |||||| ||||||| 
Sbjct: 121 atggtgcacgggaagctggaggtcctcctcgtctccgccaagggactcgaggacaccgat 180

                               
Query: 155 tacctctgcaacatggaccc 174
           | ||||   |||||||||||
Sbjct: 181 ttcctcaataacatggaccc 200
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>gb|AC170421.7| Rhesus Macaque 14 BAC CH250-340G19 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 169902

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   gaaagggaagtgaccctgaa 247
             ||||||||||||||||||||
Sbjct: 75968 gaaagggaagtgaccctgaa 75987
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>emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chromosome 2, complete
              sequence
          Length = 181349

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    tccggaggaggctcgggatg 482
              ||||||||||||||||||||
Sbjct: 131978 tccggaggaggctcgggatg 131959
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>emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-533L7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162986

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    gaaagggaagtgaccctgaa 247
              ||||||||||||||||||||
Sbjct: 147235 gaaagggaagtgaccctgaa 147216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,624,688
Number of Sequences: 3902068
Number of extensions: 4624688
Number of successful extensions: 89111
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88663
Number of HSP's gapped (non-prelim): 444
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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