| Clone Name | bags33j16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A22, full insert sequence Length = 622 Score = 341 bits (172), Expect = 1e-90 Identities = 307/352 (87%) Strand = Plus / Plus Query: 43 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 102 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 32 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 91 Query: 103 gcaagatgctcagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaa 162 |||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| | Sbjct: 92 gcaagaggctcagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggca 151 Query: 163 agcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgattt 222 ||||||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| || Sbjct: 152 agcaaaagaggaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatt 211 Query: 223 ccagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagca 282 ||||| ||| | | |||| |||||||||||||||||||||||||| || |||||||| Sbjct: 212 tcagaggaaggttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagca 271 Query: 283 agagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggt 342 |||||| | |||||| | ||| |||||||||||||| |||| |||||||| || || Sbjct: 272 ggagacagcggaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagt 331 Query: 343 gattcagatgcttctgaggcacgtcaccactgtgaagaactaaaggttgatg 394 ||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 332 gattcagatgcttctgaggcatgtcaccactgtgaagaactaagggttgatg 383
>dbj|AK059032.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C05, full insert sequence Length = 652 Score = 333 bits (168), Expect = 3e-88 Identities = 306/352 (86%) Strand = Plus / Plus Query: 43 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 102 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 65 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 124 Query: 103 gcaagatgctcagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaa 162 ||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| | Sbjct: 125 gcaaggggctcagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggca 184 Query: 163 agcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgattt 222 ||||||||| ||||| ||||| || |||||||| |||||||| |||||||||||||| || Sbjct: 185 agcaaaagaggaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatt 244 Query: 223 ccagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagca 282 ||||| ||| | | |||| |||||||||||||||||||||||||| || |||||||| Sbjct: 245 tcagaggaaggttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagca 304 Query: 283 agagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggt 342 |||||| | |||||| | ||| |||||||||||||| |||| |||||||| || || Sbjct: 305 ggagacagcggaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagt 364 Query: 343 gattcagatgcttctgaggcacgtcaccactgtgaagaactaaaggttgatg 394 ||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 365 gattcagatgcttctgaggcatgtcaccactgtgaagaactaagggttgatg 416
>ref|XM_473769.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 333 Score = 327 bits (165), Expect = 2e-86 Identities = 291/333 (87%) Strand = Plus / Plus Query: 53 atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 112 |||||||||| ||| |||| ||||||||||||||||||| | |||||||||||||| ||| Sbjct: 1 atggacgcaaacagacgccaaagtggaatccagcaattgttggctgcagagcaagaggct 60 Query: 113 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 172 |||||||| ||||||||||| |||||||| ||| |||||||||||||| |||||||||| Sbjct: 61 cagcaaatagtaaatgctgctagggctgcaaaatcggcaaggcttaggcaagcaaaagag 120 Query: 173 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 232 ||||| ||||| || |||||||| |||||||| |||||||||||||| || ||||| ||| Sbjct: 121 gaggctgagagggaaatagctgaataccgtgcccagatggaggctgaatttcagaggaag 180 Query: 233 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 292 | | |||| |||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 181 gttgcagagagtagcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcg 240 Query: 293 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 352 | |||||| | ||| |||||||||||||| |||| |||||||| || |||||||||||| Sbjct: 241 gaaaaaatcgcacaactcaagcagcaggctgcaagtatctcccctgaagtgattcagatg 300 Query: 353 cttctgaggcacgtcaccactgtgaagaactaa 385 ||||||||||| ||||||||||||||||||||| Sbjct: 301 cttctgaggcatgtcaccactgtgaagaactaa 333
>gb|AY108236.1| Zea mays PCO086968 mRNA sequence Length = 750 Score = 244 bits (123), Expect = 2e-61 Identities = 279/331 (84%) Strand = Plus / Plus Query: 53 atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 112 |||||||| | |||||||| | |||| || ||||| ||||| ||||| ||||| || ||| Sbjct: 147 atggacgccaacaggcgccaaggtgggattcagcagttgctggctgcggagcaggaggct 206 Query: 113 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 172 ||||||||||| ||||| || || |||||||| | |||||||||||| |||| ||||| Sbjct: 207 cagcaaattgtgaatgcggctagagctgctaagtcagcaaggcttaggcaagcgaaagag 266 Query: 173 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 232 ||||| ||||| || ||||| || |||||||| |||||||||||||| |||||||| ||| Sbjct: 267 gaggcagagagggaaatagccgaataccgtgcccagatggaggctgagttccagaggaag 326 Query: 233 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 292 || | |||| ||| |||||||||||||| || ||||| || || ||| ||||||||| Sbjct: 327 gtcgcagagagcagtggtgactctggtgcgaacgtcaagcgtctcgaggaagagacaacg 386 Query: 293 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 352 | ||||| ||||||||||| |||||||| |||| |||||||||||| || ||||||||| Sbjct: 387 gcgaaaatcgaacagctcaaccagcaggctgcaagcatctccccagatgtcattcagatg 446 Query: 353 cttctgaggcacgtcaccactgtgaagaact 383 ||||||||||| |||||||| |||||||||| Sbjct: 447 cttctgaggcatgtcaccaccgtgaagaact 477
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 304 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 42480 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 42421 Query: 305 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 364 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 42420 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 42361 Query: 365 gtcaccactgtgaagaactaaaggttgatg 394 ||||||||||||||||||||| |||||||| Sbjct: 42360 gtcaccactgtgaagaactaagggttgatg 42331 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 43 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 102 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 43208 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 43149 Query: 103 gcaagatgctcagcaaattgtaaatgctgccagggctg 140 |||||| ||||||||||| ||||||||||| ||||||| Sbjct: 43148 gcaagaggctcagcaaatagtaaatgctgctagggctg 43111 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 147 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 206 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 42676 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 42617 Query: 207 agatggaggctgatttccagag 228 ||||||||||||| || ||||| Sbjct: 42616 agatggaggctgaatttcagag 42595
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 304 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 30409102 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 30409043 Query: 305 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 364 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 30409042 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 30408983 Query: 365 gtcaccactgtgaagaactaaaggttgatg 394 ||||||||||||||||||||| |||||||| Sbjct: 30408982 gtcaccactgtgaagaactaagggttgatg 30408953 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 43 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 102 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 30409830 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 30409771 Query: 103 gcaagatgctcagcaaattgtaaatgctgccagggctg 140 |||||| ||||||||||| ||||||||||| ||||||| Sbjct: 30409770 gcaagaggctcagcaaatagtaaatgctgctagggctg 30409733 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 147 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 206 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 30409298 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 30409239 Query: 207 agatggaggctgatttccagag 228 ||||||||||||| || ||||| Sbjct: 30409238 agatggaggctgaatttcagag 30409217
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 304 |||||||||||||||||||||||||| || |||||||| |||||| | |||||| | | Sbjct: 158998 agcggtgactctggtgcaaatgtcaagcgtcttgagcaggagacagcggaaaaaatcgca 158939 Query: 305 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 364 || |||||||||||||| |||| |||||||| || ||||||||||||||||||||||| Sbjct: 158938 caactcaagcagcaggctgcaagtatctcccctgaagtgattcagatgcttctgaggcat 158879 Query: 365 gtcaccactgtgaagaactaaaggttgatg 394 ||||||||||||||||||||| |||||||| Sbjct: 158878 gtcaccactgtgaagaactaagggttgatg 158849 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 43 cagcccaaacatggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcaga 102 |||| |||| |||||||||| ||| |||| ||||||||||||||||||| | |||||||| Sbjct: 159726 cagcacaaagatggacgcaaacagacgccaaagtggaatccagcaattgttggctgcaga 159667 Query: 103 gcaagatgctcagcaaattgtaaatgctgccagggctg 140 |||||| ||||||||||| ||||||||||| ||||||| Sbjct: 159666 gcaagaggctcagcaaatagtaaatgctgctagggctg 159629 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 147 cggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagtaccgtgcgc 206 |||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct: 159194 cggcaaggcttaggcaagcaaaagaggaggctgagagggaaatagctgaataccgtgccc 159135 Query: 207 agatggaggctgatttccagag 228 ||||||||||||| || ||||| Sbjct: 159134 agatggaggctgaatttcagag 159113
>ref|XM_467332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 135 bits (68), Expect = 1e-28 Identities = 182/220 (82%) Strand = Plus / Plus Query: 164 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 223 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 304 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 363 Query: 224 cagagaaagctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaa 283 ||||| ||| | | |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 364 cagaggaaggttgcggagagtagcggtgattctggtgcaaacgtaaaacggcttgagcaa 423 Query: 284 gagacaaacgtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtg 343 || || || ||||||| || || ||| ||||||| ||||| ||||||| || ||| Sbjct: 424 gaaactgacacgaaaattgcgcaactgaaggagcaggctgcaaatgtctcccctgaagtg 483 Query: 344 attcagatgcttctgaggcacgtcaccactgtgaagaact 383 || ||||||||||| ||||| || ||||| |||||||||| Sbjct: 484 atccagatgcttcttaggcatgtaaccaccgtgaagaact 523 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 75 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 132 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 238 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 295
>gb|AY103882.1| Zea mays PCO130190 mRNA sequence Length = 760 Score = 125 bits (63), Expect = 1e-25 Identities = 264/331 (79%) Strand = Plus / Plus Query: 53 atggacgcaagcaggcgcccaagtggaatccagcaattgcttgctgcagagcaagatgct 112 |||||||| | |||||||| ||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 142 atggacgcgaacaggcgccagagtgggatccagcagttgctggctgcggagcaggaggct 201 Query: 113 cagcaaattgtaaatgctgccagggctgctaaaacggcaaggcttaggaaagcaaaagaa 172 ||||||||||| ||||| || || ||||| || | || ||||| ||| |||||||||| Sbjct: 202 cagcaaattgtgaatgccgctagagctgccaagtcagcgaggctcaggcaagcaaaagag 261 Query: 173 gaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttccagagaaag 232 ||||| ||| | || ||||| || |||||||| |||||||||||||| || ||||| ||| Sbjct: 262 gaggctgagcgggaaatagccgaataccgtgcccagatggaggctgagtttcagaggaag 321 Query: 233 ctcaccgagaccagcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaac 292 | | |||| |||||| ||||| |||||||| ||||| || || ||| |||| || Sbjct: 322 gttgcagagagcagcggcgactccggtgcaaacgtcaagcgtctcgaggaagaaacggcg 381 Query: 293 gtaaaaattgaacagctcaagcagcaggcagcaaacatctccccagaggtgattcagatg 352 | || || || || |||| |||||||| ||| ||||||||| || || ||||||||| Sbjct: 382 gcgaagatcgagcaactcacccagcaggccacaagcatctccccggatgtcattcagatg 441 Query: 353 cttctgaggcacgtcaccactgtgaagaact 383 |||||| |||| |||||||| || ||||||| Sbjct: 442 cttctgcggcatgtcaccaccgtcaagaact 472
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 164 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 223 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 28917561 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 28917502 Query: 224 cagag 228 ||||| Sbjct: 28917501 cagag 28917497 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 304 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 28917405 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 28917346 Query: 305 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 364 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 28917345 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 28917286 Query: 365 gtcaccactgtgaagaact 383 || ||||| |||||||||| Sbjct: 28917285 gtaaccaccgtgaagaact 28917267 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 75 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 132 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 28918325 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 28918268
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 164 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 223 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 110253 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 110194 Query: 224 cagag 228 ||||| Sbjct: 110193 cagag 110189 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 304 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 110097 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 110038 Query: 305 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 364 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 110037 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 109978 Query: 365 gtcaccactgtgaagaact 383 || ||||| |||||||||| Sbjct: 109977 gtaaccaccgtgaagaact 109959 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 75 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 132 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 111017 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 110960
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 164 gcaaaagaagaggcggagagagagatagctgagtaccgtgcgcagatggaggctgatttc 223 |||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct: 619 gcaaaagaggaggctgagagagaaatagctgagtaccgtgctcagatggaagctgagttc 560 Query: 224 cagag 228 ||||| Sbjct: 559 cagag 555 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaa 304 |||||||| ||||||||||| || ||||| ||||||||||| || || ||||||| Sbjct: 463 agcggtgattctggtgcaaacgtaaaacggcttgagcaagaaactgacacgaaaattgcg 404 Query: 305 cagctcaagcagcaggcagcaaacatctccccagaggtgattcagatgcttctgaggcac 364 || || ||| ||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 403 caactgaaggagcaggctgcaaatgtctcccctgaagtgatccagatgcttcttaggcat 344 Query: 365 gtcaccactgtgaagaact 383 || ||||| |||||||||| Sbjct: 343 gtaaccaccgtgaagaact 325 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 75 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 132 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 1383 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1326
>emb|AJ005900.1|NTA005900 Nicotiana tabacum mRNA for V-ATPase subunit G (vag2 gene) Length = 552 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 240 agaccagcggtgactctggtgcaaatgtcaaacgccttgagcaaga 285 |||| |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 266 agactagcggtgattcgggtgctaatgtcaaacgccttgagcaaga 311 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 97 tgcagagcaagatgctcagcaaattgtaaatgctgccagg 136 |||||||||||| ||||| || || || |||||||||||| Sbjct: 123 tgcagagcaagaagctcaacatatagtcaatgctgccagg 162
>gb|DQ284486.1| Solanum tuberosum clone 020G11 ATPase-like mRNA, complete cds Length = 716 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 350 atgcttctgaggcacgtcaccactgtgaagaactaaa 386 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 341 atgcttctgaggcacgtaaccacagtgaagaactaaa 377 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 185 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 244 ||||||||||| | |||||| | ||||||||||| || ||||||||||| |||| Sbjct: 176 gagatagctgaattccgtgcttacatggaggctgaatttcagagaaagcttgaacagact 235 Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgag 280 || |||||||| ||||| ||||||||||| |||||| Sbjct: 236 agtggtgactcaggtgctaatgtcaaacgtcttgag 271
>emb|AJ005899.1|NTA005899 Nicotiana tabacum mRNA for V-ATPase subunit G (vag1 gene) Length = 807 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 347 cagatgcttctgaggcacgtcaccactgtgaagaactaa 385 |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 346 cagatgctcctgaggcacgtaaccacagtgaagaactaa 384 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Plus Query: 185 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 244 ||||||||||| | ||||| | ||||||||||| || ||||||||||| |||| Sbjct: 184 gagatagctgaatttcgtgcttacatggaggctgagtttcagagaaagcttgaacagact 243 Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagcaaga 285 || |||||||| || || ||||||||||| ||||||||||| Sbjct: 244 agtggtgactcgggcgctaatgtcaaacgtcttgagcaaga 284
>dbj|AK068212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D16, full insert sequence Length = 1366 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 75 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgc 132 ||||||| |||||||| | |||||||||||||| ||||| || ||||| |||||||| Sbjct: 1069 gtggaattcagcaattattggctgcagagcaagaagctcaacagattgttaatgctgc 1126
>emb|AJ879064.1| Capsicum chinense mRNA for ATPase Length = 617 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Plus Query: 185 gagatagctgagtaccgtgcgcagatggaggctgatttccagagaaagctcaccgagacc 244 ||||||||||| | |||||| | |||||||| || || ||||||||||| |||| Sbjct: 198 gagatagctgaattccgtgcttacatggaggccgagtttcagagaaagcttgaacagact 257 Query: 245 agcggtgactctggtgcaaatgtcaaacgccttgagc 281 || |||||||| ||||| ||||||||||| ||||||| Sbjct: 258 agtggtgactcaggtgctaatgtcaaacggcttgagc 294 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 348 agatgcttctgaggcacgtcaccactgtgaagaactaa 385 |||||||||||||||| || || || |||||||||||| Sbjct: 361 agatgcttctgaggcatgtaacgacagtgaagaactaa 398
>gb|AY149472.1| Acinetobacter baumannii strain 8399 siderophore and iron transport locus, complete sequence Length = 21931 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 295 aaaaattgaacagctcaagcagca 318 |||||||||||||||||||||||| Sbjct: 3128 aaaaattgaacagctcaagcagca 3151
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence Length = 110895 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 254 tctggtgcaaatgtcaaacgccttgagcaagagac 288 |||||||| |||||||| || |||||||||||||| Sbjct: 39 tctggtgctaatgtcaagcgacttgagcaagagac 73
>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete sequence Length = 128239 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 254 tctggtgcaaatgtcaaacgccttgagcaagagac 288 |||||||| |||||||| || |||||||||||||| Sbjct: 102402 tctggtgctaatgtcaagcgacttgagcaagagac 102436
>ref|NM_118502.2| Arabidopsis thaliana unknown protein AT4G23710 mRNA, complete cds Length = 697 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 129 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 122 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 171
>ref|NM_180158.2| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390 (VMA10) transcript variant AT3G01390.2 mRNA, complete cds Length = 834 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 268 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 327 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 328 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 377
>ref|NM_111005.3| Arabidopsis thaliana VMA10 (VACUOLAR MEMBRANE ATPASE 10) AT3G01390 (VMA10) transcript variant AT3G01390.1 mRNA, complete cds Length = 665 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 99 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 129 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 9976 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 10025
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII project) Length = 119430 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 129 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 68385 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 68434
>gb|AY114730.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G AVMA10 (At3g01390) mRNA, complete cds Length = 536 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 28 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 87 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 88 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 137
>gb|AY072365.1| Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10) (At3g01390) mRNA, complete cds Length = 654 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 99 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 158 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 159 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 208
>emb|BX825355.1|CNS0A6BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZE11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 613 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 48 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 107 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 108 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 157
>gb|BT003107.1| Arabidopsis thaliana At4g23710 mRNA, complete cds Length = 321 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgc 129 ||||||||| |||||||||| || | || |||||||||||||| ||||| Sbjct: 16 atccagcaactgcttgctgctgaacgtgaagctcagcaaattgtcaatgc 65
>emb|AJ005901.1|ATA005901 Arabidopsis thaliana mRNA for V-ATPase subunit G (vag1 gene) Length = 528 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 66 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 125 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 126 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 175
>gb|AF184068.1|AF184068 Citrus limon vacuolar membrane ATPase subunit G (LVMA10) mRNA, complete cds Length = 500 Score = 44.1 bits (22), Expect = 0.39 Identities = 121/154 (78%) Strand = Plus / Plus Query: 75 gtggaatccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgcca 134 ||||||| ||||||||||| ||||| || ||||| ||||| || ||||| |||||||| Sbjct: 113 gtggaattcagcaattgctggctgctgaacaagaagctcaacacattgttgctgctgcca 172 Query: 135 gggctgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctg 194 | ||| |||| ||| || || | | |||| ||||||||||| || || ||||| |||| Sbjct: 173 gaaatgcaaaaatggctagactgaagcaagccaaagaagaggctgaaagggagattgctg 232 Query: 195 agtaccgtgcgcagatggaggctgatttccagag 228 | || || || ||| ||||| ||| |||||||| Sbjct: 233 aatatcgagctcaggtggagcgtgagttccagag 266
>gb|AF181688.1|AF181688 Arabidopsis thaliana vacuolar membrane ATPase subunit G (AVMA10) mRNA, complete cds Length = 652 Score = 44.1 bits (22), Expect = 0.39 Identities = 88/110 (80%) Strand = Plus / Plus Query: 80 atccagcaattgcttgctgcagagcaagatgctcagcaaattgtaaatgctgccagggct 139 ||||| || ||||||||||| ||| ||| ||||| || ||||| |||||||| ||| | Sbjct: 70 atccaacagttgcttgctgctgaggtagaagctcaacacattgtcaatgctgcaaggacc 129 Query: 140 gctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagat 189 || |||| |||||| || | | |||| || |||||||| |||| |||||| Sbjct: 130 gcaaaaatggcaagactgaagcaagctaaggaagaggcagagaaagagat 179
>emb|CR715651.2|CNS0GF5B Tetraodon nigroviridis full-length cDNA Length = 1034 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 ggaggctgatttccagagaaa 231 ||||||||||||||||||||| Sbjct: 852 ggaggctgatttccagagaaa 872
>gb|AC099558.2| Homo sapiens chromosome 3 clone RP11-680P23, complete sequence Length = 180049 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gtaaatgctgccagggctgct 142 ||||||||||||||||||||| Sbjct: 56512 gtaaatgctgccagggctgct 56532
>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence Length = 199721 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 tggaggctgatttccagagaa 230 ||||||||||||||||||||| Sbjct: 149858 tggaggctgatttccagagaa 149878
>gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, complete sequence Length = 196773 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 gtaaatgctgccagggctgct 142 ||||||||||||||||||||| Sbjct: 134646 gtaaatgctgccagggctgct 134666
>gb|AC140658.2| Homo sapiens chromosome 16 clone RP11-812E19, complete sequence Length = 188406 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 170354 gcagatggaggctgatttcc 170335
>gb|AC125225.4| Mus musculus BAC clone RP23-36I17 from 6, complete sequence Length = 215406 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 aaattgtaaatgctgccagg 136 |||||||||||||||||||| Sbjct: 1962 aaattgtaaatgctgccagg 1943
>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence Length = 165179 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aaattgtaaatgctgccagg 136 |||||||||||||||||||| Sbjct: 21739 aaattgtaaatgctgccagg 21758
>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence Length = 195918 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 acatctccccagaggtgattcaga 350 |||||||||||||||||| ||||| Sbjct: 170750 acatctccccagaggtgactcaga 170727
>gb|AC166997.1| Mus musculus BAC clone RP23-107H9 from chromosome 14, complete sequence Length = 201316 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 acagctcaagcagcaggcag 323 |||||||||||||||||||| Sbjct: 30267 acagctcaagcagcaggcag 30248
>emb|AL391825.15| Human DNA sequence from clone RP11-456P18 on chromosome 1 Contains the 3' end of the ATF6 gene for activating transcription factor 6, a proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)(PSME1) pseudogene, the 3' end of a novel gene (DKFZP586L151) and a CpG island, complete sequence Length = 211662 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 gatggaggctgatttccagagaaa 231 |||||||||||||| ||||||||| Sbjct: 30731 gatggaggctgattgccagagaaa 30708
>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence Length = 186890 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 140680 gcagatggaggctgatttcc 140699
>gb|AC140254.4| Mus musculus BAC clone RP23-467N7 from chromosome 10, complete sequence Length = 196465 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 agaggcggagagagagatag 191 |||||||||||||||||||| Sbjct: 154900 agaggcggagagagagatag 154881
>gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosome 10, complete sequence Length = 182735 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 agaggcggagagagagatag 191 |||||||||||||||||||| Sbjct: 160522 agaggcggagagagagatag 160541
>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete sequence Length = 238589 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 taaaggttgatgagtcggcc 402 |||||||||||||||||||| Sbjct: 232829 taaaggttgatgagtcggcc 232848
>gb|AC106727.5| Homo sapiens 3q BAC RP11-534K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153692 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gagagagagatagctgagta 198 |||||||||||||||||||| Sbjct: 20110 gagagagagatagctgagta 20091
>gb|AC023538.7| Homo sapiens chromosome 8, clone RP11-510I21, complete sequence Length = 189543 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gagagagagatagctgagta 198 |||||||||||||||||||| Sbjct: 133588 gagagagagatagctgagta 133607
>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence Length = 148807 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 68419 gcagatggaggctgatttcc 68400
>gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosome 9, complete sequence Length = 154436 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 acatctccccagaggtgattcaga 350 |||||||||||||||||| ||||| Sbjct: 122971 acatctccccagaggtgactcaga 122994
>gb|AC141272.3| Homo sapiens chromosome 16 clone RP11-1415K9, complete sequence Length = 185187 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 54778 gcagatggaggctgatttcc 54797
>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence Length = 173206 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 80391 gcagatggaggctgatttcc 80410
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aggaaagcaaaagaagaggc 177 |||||||||||||||||||| Sbjct: 156263 aggaaagcaaaagaagaggc 156282
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 151083 gcagatggaggctgatttcc 151102
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 cgtgcgcagatggaggctgatttc 223 ||||||||||| |||||||||||| Sbjct: 20700 cgtgcgcagatcgaggctgatttc 20723
>emb|AJ438591.1|MCR438591 Mesembryanthemum crystallinum mRNA for vacuolar ATPase subunit G (vha-G gene) Length = 587 Score = 40.1 bits (20), Expect = 6.1 Identities = 131/168 (77%) Strand = Plus / Plus Query: 139 tgctaaaacggcaaggcttaggaaagcaaaagaagaggcggagagagagatagctgagta 198 |||||| ||||| || || ||| |||||||||||||||| || | ||||| ||||| | Sbjct: 130 tgctaagacggccagactaaggcaagcaaaagaagaggctgaaaaggagattgctgaatt 189 Query: 199 ccgtgcgcagatggaggctgatttccagagaaagctcaccgagaccagcggtgactctgg 258 |||||| || ||||| || ||| ||||||| ||| | |||| | ||| ||||| || Sbjct: 190 ccgtgcccaaatggaagccgatcatcagagaaggcttgcagagagtaccggagactcagg 249 Query: 259 tgcaaatgtcaaacgccttgagcaagagacaaacgtaaaaattgaaca 306 ||| ||||| || |||||||| ||||| || || | ||||||||||| Sbjct: 250 tgctaatgtgaagcgccttgaacaagaaaccaatgctaaaattgaaca 297
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 423254 gcagatggaggctgatttcc 423273 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 240991 gcagatggaggctgatttcc 241010
>gb|AC005337.1|AC005337 Homo sapiens chromosome 19, cosmid R25269, complete sequence Length = 43581 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aggcttaggaaagcaaaaga 171 |||||||||||||||||||| Sbjct: 14524 aggcttaggaaagcaaaaga 14505
>gb|CP000165.1| Drosophila melanogaster genomic scaffold 211000022278591 Length = 119078 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaggcttaggaaagcaaaag 170 |||||||||||||||||||| Sbjct: 6302 aaggcttaggaaagcaaaag 6321
>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence Length = 192911 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 aaattgtaaatgctgccagg 136 |||||||||||||||||||| Sbjct: 189609 aaattgtaaatgctgccagg 189590
>gb|M99679.1|HUMIGH353X Human immunoglobulin heavy chain variable region V3-53 (IGHV@) gene, exons 1-2 Length = 724 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 608 gcagatggaggctgatttcc 627
>dbj|AB019439.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 3 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 23254 gcagatggaggctgatttcc 23273
>dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 2 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gcagatggaggctgatttcc 224 |||||||||||||||||||| Sbjct: 40991 gcagatggaggctgatttcc 41010 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,438,530 Number of Sequences: 3902068 Number of extensions: 4438530 Number of successful extensions: 82104 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 81896 Number of HSP's gapped (non-prelim): 198 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)