| Clone Name | bags33i07 |
|---|---|
| Clone Library Name | barley_pub |
>AROG_LYCES (P37216) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) Length = 541 Score = 214 bits (544), Expect = 2e-55 Identities = 100/112 (89%), Positives = 105/112 (93%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW++DPMHGNTIKAPCGLKTRPFDSI EVRAFFDVHDQEGSHPGG+HLEMTGQNVT Sbjct: 427 QIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVT 486 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKSGLT 363 ECIGGSRTVTFDDL RYHTHCDPRLNASQSLEL+FIIAERLRKRR+ S T Sbjct: 487 ECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQST 538
>AROF_SOLTU (P21357) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) Length = 538 Score = 213 bits (543), Expect = 2e-55 Identities = 99/109 (90%), Positives = 104/109 (95%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW++DPMHGNTIKAPCGLKTRPFDSI EVRAFFDVHDQEGSHPGG+HLEMTGQNVT Sbjct: 427 QIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVT 486 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 354 ECIGGSRTVTFDDL RYHTHCDPRLNASQSLEL+FIIAERLRKRR+ S Sbjct: 487 ECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGS 535
>AROF_TOBAC (P27608) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) Length = 542 Score = 213 bits (542), Expect = 3e-55 Identities = 99/109 (90%), Positives = 104/109 (95%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW++DPMHGNTIKAPCGLKTRPFDSI EVRAFFDVH+QEGSHPGG+HLEMTGQNVT Sbjct: 428 QIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVT 487 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 354 ECIGGSRTVTFDDL RYHTHCDPRLNASQSLELAFIIAERLRKRR+ S Sbjct: 488 ECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGS 536
>AROG_SOLTU (P37822) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) Length = 511 Score = 210 bits (534), Expect = 3e-54 Identities = 96/109 (88%), Positives = 104/109 (95%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW+ DPMHGNTIKAPCGLKTR FDSI+ EVRAFFDVH+QEGSHPGGIHLEMTGQNVT Sbjct: 400 QIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNVT 459 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 354 ECIGGSRTVT+DDLG RYHTHCDPRLNASQSLEL+FI+AERLR+RRM + Sbjct: 460 ECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRMST 508
>AROF_LYCES (P37215) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) Length = 511 Score = 204 bits (518), Expect = 2e-52 Identities = 95/109 (87%), Positives = 101/109 (92%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW+ DPMHGNTIKAPCGLKTR FDSI EVRAFFDVH+QEGSHP IHLEMTGQNVT Sbjct: 400 QIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQNVT 459 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 354 ECIGGSRTVT+DDLG RYHTHCDPRLNASQSLEL+FI+AERLR+RRM S Sbjct: 460 ECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRMSS 508
>AROF_ARATH (P29976) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) Length = 525 Score = 202 bits (515), Expect = 4e-52 Identities = 95/109 (87%), Positives = 100/109 (91%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW+ DPMHGNTIKAPCGLKTR FDSI+ EVRAF DVH+QEGSH GGIHLEMTGQNVT Sbjct: 413 QIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIHLEMTGQNVT 472 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKS 354 ECIGGSRTVT+DDL RYHTHCDPRLNASQSLELAFI+AERLRKRR S Sbjct: 473 ECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRRTGS 521
>AROG_ARATH (Q00218) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast| precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 2) (DAHP synthetase 2) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2) Length = 507 Score = 198 bits (504), Expect = 8e-51 Identities = 94/116 (81%), Positives = 104/116 (89%) Frame = +1 Query: 28 QIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVT 207 QIVTW++DPMHGNTI AP GLKTR FD+I E+RAFFDVHDQEGS PGG+HLEMTGQNVT Sbjct: 390 QIVTWVSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDVHDQEGSFPGGVHLEMTGQNVT 449 Query: 208 ECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRRMKSGLTNNLP 375 EC+GGSRT+T++DL RYHTHCDPRLNASQSLELAFIIAERLRKRR+ SG NLP Sbjct: 450 ECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRLGSG---NLP 502
>AROF_STRCO (P80574) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)| (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) Length = 449 Score = 140 bits (352), Expect = 3e-33 Identities = 62/101 (61%), Positives = 77/101 (76%) Frame = +1 Query: 34 VTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC 213 V WITDPMHGNT +A G KTR FD +++EV+ FF+VH G+HPGGIH+E+TG +VTEC Sbjct: 347 VAWITDPMHGNTYEAASGHKTRRFDDVLDEVKGFFEVHKSLGTHPGGIHVELTGDDVTEC 406 Query: 214 IGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLR 336 +GG + DDL RY T CDPRLN SQSL+LAF++AE R Sbjct: 407 VGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYR 447
>AROF_STRLI (P55911) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)| (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (Fragment) Length = 146 Score = 135 bits (341), Expect = 6e-32 Identities = 61/101 (60%), Positives = 76/101 (75%) Frame = +1 Query: 34 VTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC 213 V WITDPMHGNT +A KTR FD +++EV+ FF+VH G+HPGGIH+E+TG +VTEC Sbjct: 44 VAWITDPMHGNTYEAAPVHKTRRFDDVLDEVKGFFEVHKSLGTHPGGIHVELTGDDVTEC 103 Query: 214 IGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLR 336 +GG + DDL RY T CDPRLN SQSL+LAF++AE R Sbjct: 104 VGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYR 144
>AROF_NEUCR (P80576) Phospho-2-dehydro-3-deoxyheptonate aldolase (EC 2.5.1.54)| (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) Length = 481 Score = 112 bits (281), Expect = 6e-25 Identities = 53/114 (46%), Positives = 73/114 (64%) Frame = +1 Query: 4 SVLSAILXQIVTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHL 183 +V S+ + V W DPMHGNT G+KTR F I +E++ +H +E S+ GG+HL Sbjct: 355 TVESSEYARTVVWQCDPMHGNTQSVSGGIKTRKFSDIFSELQQTLRIHKEEKSYLGGMHL 414 Query: 184 EMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELAFIIAERLRKRR 345 E+TG VTEC+GG + DDL Y + CDPRLN Q+LELAF++A+ R+ R Sbjct: 415 ELTGDAVTECLGGGAGLDEDDLSTNYTSFCDPRLNEKQALELAFLVADHYRQER 468
>PHZC_PSEFL (Q51789) Probable phospho-2-dehydro-3-deoxyheptonate aldolase (EC| 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) Length = 400 Score = 81.6 bits (200), Expect = 1e-15 Identities = 40/90 (44%), Positives = 53/90 (58%) Frame = +1 Query: 34 VTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC 213 + W++DPMHGNTI APCG KTR +I +E+ AF G GG+HLE T +V+EC Sbjct: 296 IIWLSDPMHGNTIVAPCGNKTRMVQTITDEITAFKHAVVSAGGVAGGLHLETTPDDVSEC 355 Query: 214 IGGSRTVTFDDLGDRYHTHCDPRLNASQSL 303 S +G Y + CDPRLN Q++ Sbjct: 356 --ASDAAGLGQVGSHYKSLCDPRLNPWQAI 383
>PHZC_PSECL (Q51517) Probable phospho-2-dehydro-3-deoxyheptonate aldolase (EC| 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) Length = 400 Score = 79.3 bits (194), Expect = 7e-15 Identities = 39/90 (43%), Positives = 51/90 (56%) Frame = +1 Query: 34 VTWITDPMHGNTIKAPCGLKTRPFDSIMNEVRAFFDVHDQEGSHPGGIHLEMTGQNVTEC 213 + W++DPMHGNTI APCG KTR +I E+ AF G G+HLE T +V+EC Sbjct: 296 IIWLSDPMHGNTIVAPCGNKTRMVQAITEEIAAFKHAVTSAGGVAAGLHLETTPDDVSEC 355 Query: 214 IGGSRTVTFDDLGDRYHTHCDPRLNASQSL 303 S + RY + CDPRLN Q++ Sbjct: 356 --ASDAAGLHQVASRYKSLCDPRLNPWQAI 383
>TECTA_CHICK (Q9YH85) Alpha-tectorin precursor| Length = 2120 Score = 33.1 bits (74), Expect = 0.58 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 8/53 (15%) Frame = -1 Query: 146 CTSKNA-------RTSFIMESNGRVFRPH-GALMVFPCMGSVIHVTICXRIAD 12 C S+N R+SF + + G VFR GA + FP + + TIC R+AD Sbjct: 1443 CASRNGVRGCFSTRSSFCLAAGGGVFRTFDGAFLRFPANCAFVLSTICQRLAD 1495
>NFX1_HUMAN (Q12986) Transcriptional repressor NF-X1 (EC 6.3.2.-) (Nuclear| transcription factor, X box-binding, 1) Length = 1104 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -3 Query: 66 VSVHGVSNPCDNLXQNCGQHGC 1 VSVH SNPC+N+ NCGQH C Sbjct: 476 VSVH-CSNPCENIL-NCGQHQC 495
>LDH_CLOPE (Q8XP62) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH)| Length = 317 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/68 (27%), Positives = 28/68 (41%) Frame = -3 Query: 219 TDALGYVLSSHFKVDASWVASFLVMHIEECTHLVHNGVEWTSLQTTWGLDGVSVHGVSNP 40 T L Y+LS HF +DA V ++++ G S T W L ++ V Sbjct: 152 TSRLKYMLSEHFDIDARNVHTYII------------GEHGDSEITAWSLTNIAGANVEEY 199 Query: 39 CDNLXQNC 16 C + NC Sbjct: 200 CKTVCANC 207
>GSPL_PSEAE (P25060) General secretion pathway protein L| Length = 382 Score = 31.2 bits (69), Expect = 2.2 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Frame = +1 Query: 100 PFDSIMNEVRAFFDVHDQEGSHPGGIH--LEMTGQNVTECIGGSRTVTFDDLGDRYHTHC 273 P D + +RA FD H + + GG L + GQ T IGG TV+ + L D Sbjct: 277 PEDRKLINLRAQFDQHLADSASSGGEGQLLGLLGQAAT-VIGGEPTVSVEQL-DFSAARG 334 Query: 274 DPRLNASQSLELAFIIAERLRKRRMKSGLTNNL 372 D L F + ERLR R +SGL L Sbjct: 335 DVALQVRAP---GFDVLERLRSRLSESGLAVQL 364
>MTR1L_SHEEP (Q28558) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 575 Score = 29.6 bits (65), Expect = 6.4 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 4/26 (15%) Frame = -2 Query: 289 HSALGRSECGSGHP----GHRRSRSA 224 H A G+ EC SGHP GH RS SA Sbjct: 373 HGAAGQPECVSGHPKPASGHSRSVSA 398
>NMT1_BOVIN (P31717) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)| (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase) Length = 497 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Frame = -1 Query: 224 DPPMHSVTFCPVISRWM--PPGWLPSWSC 144 D M + P W PPGWLP W C Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
>NMT1_RAT (Q8K1Q0) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)| (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase) Length = 496 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Frame = -1 Query: 224 DPPMHSVTFCPVISRWM--PPGWLPSWSC 144 D M + P W PPGWLP W C Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
>NMT1_PONPY (Q5RAF3) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)| (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase) Length = 496 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Frame = -1 Query: 224 DPPMHSVTFCPVISRWM--PPGWLPSWSC 144 D M + P W PPGWLP W C Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
>NMT1_MOUSE (O70310) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)| (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase) Length = 496 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Frame = -1 Query: 224 DPPMHSVTFCPVISRWM--PPGWLPSWSC 144 D M + P W PPGWLP W C Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
>NMT1_HUMAN (P30419) Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97)| (Peptide N-myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase) Length = 496 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Frame = -1 Query: 224 DPPMHSVTFCPVISRWM--PPGWLPSWSC 144 D M + P W PPGWLP W C Sbjct: 184 DDNMFRFDYSPEFLLWALRPPGWLPQWHC 212
>ELTD1_HUMAN (Q9HBW9) EGF, latrophilin and seven transmembrane domain-containing| protein 1 precursor (EGF-TM7-latrophilin-related protein) (ETL protein) Length = 690 Score = 29.3 bits (64), Expect = 8.4 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -3 Query: 120 VHNGVEWTSLQTTWGLDGVSVHGVSNPCDNLXQNCGQH 7 + NG+E + +GV++ N C NL Q+CG++ Sbjct: 35 IRNGIEACYCNMGFSGNGVTICEDDNECGNLTQSCGEN 72 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,982,610 Number of Sequences: 219361 Number of extensions: 1984171 Number of successful extensions: 5363 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5360 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)