ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33h21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 ... 207 1e-53
2VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 ... 204 1e-52
3VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 145 7e-35
4VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3... 127 2e-29
5VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 124 1e-28
6VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 124 2e-28
7VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 123 3e-28
8VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 123 3e-28
9VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 123 3e-28
10VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 106 5e-23
11VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 99 6e-21
12VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14... 99 7e-21
13VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 ... 86 5e-17
14P3C2B_HUMAN (O00750) Phosphatidylinositol-4-phosphate 3-kinase C... 35 0.100
15LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-bind... 33 0.38
16LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit... 32 0.85
17CHRD_MOUSE (Q9Z0E2) Chordin precursor 32 1.1
18VATC_DESSY (O06502) V-type ATP synthase subunit C (EC 3.6.3.14) ... 32 1.4
19POLN_MIDDV (P03318) Nonstructural polyprotein (Polyprotein nsP12... 31 1.9
20BCLX_RAT (P53563) Apoptosis regulator Bcl-X (Bcl-2-like 1 protein) 31 1.9
21CHRD_HUMAN (Q9H2X0) Chordin precursor 31 2.5
22SUREJ_STRPU (Q26627) Sperm receptor for egg jelly precursor (suREJ) 30 3.2
23NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 pr... 30 4.2
24SIM_DROME (P05709) Protein single-minded 30 4.2
25CG021_HUMAN (Q9BVT8) Protein C7orf21 (SB144) 30 5.5
26MURB_RHOS4 (Q3J4L9) UDP-N-acetylenolpyruvoylglucosamine reductas... 30 5.5
27POLN_SINDV (P03317) Nonstructural polyprotein (Polyprotein nsP12... 30 5.5
28POLN_SINDO (P27283) Nonstructural polyprotein (Polyprotein nsP12... 30 5.5
29VATC_METJA (Q57672) V-type ATP synthase subunit C (EC 3.6.3.14) ... 30 5.5
30PQQF_PSEAE (Q9I2D2) Coenzyme PQQ synthesis protein F (EC 3.4.99.... 30 5.5
31ENTF_ECOLI (P11454) Enterobactin synthetase component F (EC 2.7.... 29 9.3
32K1914_HUMAN (Q8N4X5) Protein KIAA1914 29 9.3
33BIOB_YEAST (P32451) Biotin synthase, mitochondrial precursor (EC... 29 9.3
34BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (... 29 9.3
35ITM2B_CHICK (O42204) Integral membrane protein 2B (Transmembrane... 29 9.3
36ATF6B_HUMAN (Q99941) Cyclic AMP-dependent transcription factor A... 29 9.3
37KUP_XYLFA (Q9PC78) Probable potassium transport system protein kup 29 9.3

>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)|
           (V-ATPase d subunit 2) (Vacuolar proton pump d subunit
           2)
          Length = 351

 Score =  207 bits (527), Expect = 1e-53
 Identities = 96/112 (85%), Positives = 105/112 (93%)
 Frame = +3

Query: 198 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 377
           MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQN
Sbjct: 1   MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQN 60

Query: 378 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
           EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLI
Sbjct: 61  EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLI 112



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>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)|
           (V-ATPase d subunit 1) (Vacuolar proton pump d subunit
           1)
          Length = 351

 Score =  204 bits (519), Expect = 1e-52
 Identities = 95/112 (84%), Positives = 104/112 (92%)
 Frame = +3

Query: 198 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 377
           MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQN
Sbjct: 1   MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQN 60

Query: 378 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
           EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLI
Sbjct: 61  EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLI 112



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>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase 41
           kDa accessory protein) (DVA41)
          Length = 356

 Score =  145 bits (366), Expect = 7e-35
 Identities = 65/107 (60%), Positives = 87/107 (81%)
 Frame = +3

Query: 213 MLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 392
           + +FN  DG+LEAI+RG + G+L++ADYNNLCQC+ L+D+KMH  +T+YG +L  EPSP+
Sbjct: 12  LFTFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPI 71

Query: 393 HTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
           HTTTI EK T KLV E+ H+  QA EPLSTF+ +I+YG+MIDNVVL+
Sbjct: 72  HTTTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLL 118



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>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase|
           d subunit 1) (Vacuolar proton pump d subunit 1)
           (V-ATPase 39 kDa subunit 1)
          Length = 350

 Score =  127 bits (319), Expect = 2e-29
 Identities = 59/104 (56%), Positives = 78/104 (75%)
 Frame = +3

Query: 222 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 401
           FNI +G+LE + RG + G+L QADY NL QCETL+D+K+HL  T+YG +L NEPSPL  +
Sbjct: 8   FNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVS 67

Query: 402 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
            I +K   KLV E++HM   A EPLS FL +ITYG+MIDN++L+
Sbjct: 68  VIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILL 111



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>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39
           subunit) (V-ATPase 40 kDa accessory protein) (P39)
           (Physophilin)
          Length = 351

 Score =  124 bits (312), Expect = 1e-28
 Identities = 57/106 (53%), Positives = 82/106 (77%)
 Frame = +3

Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395
           L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL 
Sbjct: 7   LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66

Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
            + I +K   K+V E++HM   A EPL++FL +ITY +MIDNV+L+
Sbjct: 67  VSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112



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>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase 40
           kDa subunit) (M40)
          Length = 348

 Score =  124 bits (311), Expect = 2e-28
 Identities = 57/104 (54%), Positives = 78/104 (75%)
 Frame = +3

Query: 222 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 401
           FNI  G+LE + RG + G+L Q+DY NL QCETL+D+K+HL  T+YG +L NEPSPL  +
Sbjct: 6   FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 65

Query: 402 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
           TI +K   KLV E++H+   + EPLSTFL +ITY +MIDN++L+
Sbjct: 66  TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILL 109



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>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit)
          Length = 351

 Score =  123 bits (309), Expect = 3e-28
 Identities = 56/106 (52%), Positives = 82/106 (77%)
 Frame = +3

Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395
           L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL 
Sbjct: 7   LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66

Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
            + I ++   K+V E++HM   A EPL++FL +ITY +MIDNV+L+
Sbjct: 67  VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112



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>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39
           subunit) (V-ATPase 40 kDa accessory protein) (P39) (32
           kDa accessory protein)
          Length = 351

 Score =  123 bits (309), Expect = 3e-28
 Identities = 56/106 (52%), Positives = 82/106 (77%)
 Frame = +3

Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395
           L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL 
Sbjct: 7   LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66

Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
            + I ++   K+V E++HM   A EPL++FL +ITY +MIDNV+L+
Sbjct: 67  VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112



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>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39
           subunit) (V-ATPase 40 kDa accessory protein) (P39) (32
           kDa accessory protein)
          Length = 351

 Score =  123 bits (309), Expect = 3e-28
 Identities = 56/106 (52%), Positives = 82/106 (77%)
 Frame = +3

Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395
           L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL 
Sbjct: 7   LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66

Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
            + I ++   K+V E++HM   A EPL++FL +ITY +MIDNV+L+
Sbjct: 67  VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112



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>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase 39
           kDa subunit) (V-ATPase subunit M39)
          Length = 343

 Score =  106 bits (264), Expect = 5e-23
 Identities = 53/108 (49%), Positives = 78/108 (72%)
 Frame = +3

Query: 210 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 389
           + LSFN + G++EA+VRG  S LL Q  Y+NL QCE+L+D ++ LS+T+YG +L N+ S 
Sbjct: 2   DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SK 60

Query: 390 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
           L ++ I  K T KL+DE+  +  QA+E LS F+ YITY +MIDN++L+
Sbjct: 61  LTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLL 108



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>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase 41
           kDa subunit)
          Length = 364

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 47/108 (43%), Positives = 72/108 (66%)
 Frame = +3

Query: 210 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 389
           E L FN+++G++E IVRG R+ LLT  +Y N+ QCE++DD+K+ L    YG +L + P  
Sbjct: 2   EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPK 60

Query: 390 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
             T+ +  K T KLV E++++   A   L+ F+ Y+TYG+MIDNV L+
Sbjct: 61  PSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALL 108



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>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d|
           subunit) (Vacuolar proton pump d subunit) (V-ATPase 39
           kDa subunit) (V-ATPase subunit M39)
          Length = 345

 Score = 99.0 bits (245), Expect = 7e-21
 Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +3

Query: 210 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 389
           E + FNI +GF+E +VRG R+GLL+   Y NL QC+TL+D+K+ LS+T+YG +L +  S 
Sbjct: 2   EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSE 61

Query: 390 LHTTTIV-EKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
             TT+++ E  + KL  E+ ++  Q++     F+ YITYG+MIDNV L+
Sbjct: 62  SLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALM 110



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>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)|
           (V-ATPase d subunit 2) (Vacuolar proton pump d subunit
           2) (V-ATPase 39 kDa subunit 2)
          Length = 350

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 41/105 (39%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
 Frame = +3

Query: 222 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 401
           FN   G+LEA+ RG ++G+L  +DY NL QCE+L+D+ + +  T+YG     E S   + 
Sbjct: 5   FNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQS-APSV 63

Query: 402 TIVEKCTL-KLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533
            ++E+C   +L+ +Y ++   + EPL+TF+++I Y  MIDNV L+
Sbjct: 64  EVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALL 108



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>P3C2B_HUMAN (O00750) Phosphatidylinositol-4-phosphate 3-kinase C2|
            domain-containing beta polypeptide (EC 2.7.1.154)
            (Phosphoinositide 3-Kinase-C2-beta) (PtdIns-3-kinase C2
            beta) (PI3K-C2beta) (C2-PI3K)
          Length = 1634

 Score = 35.4 bits (80), Expect = 0.100
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
 Frame = +3

Query: 66   EDEFWLTDKNLHRIRKRELPPGSAASCLPIPLASA-----EILPPVRTKMYSWEMLSFNI 230
            E  +WLTD +  R+ ++     S  S LP+ LASA       LP +   +  W  ++   
Sbjct: 826  ESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYVLLKQWTHMNHQD 885

Query: 231  HDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 377
              G L A         +      +L   E LD +   + A +Y  YL +
Sbjct: 886  ALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDS 934



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>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1842

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 27/90 (30%), Positives = 32/90 (35%)
 Frame = +2

Query: 101 PHPQARTPSRICXXXXXXXXXXXXXXXSGENQDVLVGDAVVQHPRWVPGGDRAGEPLGTP 280
           P P  R P R                  G++Q   V  +V Q   WVPGG      LGTP
Sbjct: 753 PRPAERQPLR---AATGTWVEAETIPDKGDSQASQVTTSVTQLSTWVPGG-----ALGTP 804

Query: 281 HPSRLQQPLPVRDPRRHQDAPLRHRVRSIP 370
            PS  +Q +P         AP    V   P
Sbjct: 805 TPSVPEQGIPEAREEAQVTAPTNVLVTPAP 834



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>LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit 1 (EC|
           4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM
           isomerase 1) (IPMI 1)
          Length = 420

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 23/54 (42%), Positives = 27/54 (50%)
 Frame = -3

Query: 281 EESRAVPPHDRLQEPIVDVERQHLPRVHLGSHRRKDLGRGEGDREAASCRSGRE 120
           EE  AVP H    +PI DVE   + +V +GS      GR    REAA    GRE
Sbjct: 271 EEQVAVPHHPDNVKPISDVEGTEINQVFIGSCTN---GRLSDLREAAKYLKGRE 321



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>CHRD_MOUSE (Q9Z0E2) Chordin precursor|
          Length = 948

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 147 LPIPLASAEILPPVRTKMYSWEMLSFNIH 233
           LP+PLA A +LPPVR++      LS + H
Sbjct: 530 LPVPLAGALVLPPVRSQAAGHAWLSLDTH 558



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>VATC_DESSY (O06502) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase|
           subunit C)
          Length = 364

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
 Frame = +3

Query: 249 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 428
           A ++   + LLT+  +N L +  TL +  ++L  T+Y  YL +  S  +T   VEK   +
Sbjct: 38  ARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSS--YTVEEVEKALER 95

Query: 429 -LVDEYKHMLCQANEPLSTFLQYITYGHMIDNV 524
            L   Y+ M     +    F + +  G  + N+
Sbjct: 96  ALAGTYELMFKILPKRSKGFFELLLEGWDVRNI 128



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>POLN_MIDDV (P03318) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: Nonstructural protein 3 (nsP3); Nonstructural
           protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC
           2.7.7.48) (Nonstructural protein 4) (nsP4)] (Fragment)
          Length = 994

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 33/124 (26%), Positives = 53/124 (42%)
 Frame = +3

Query: 45  PGTTLPCEDEFWLTDKNLHRIRKRELPPGSAASCLPIPLASAEILPPVRTKMYSWEMLSF 224
           P  T+PC   + +T + +HR+R  ++   +  S  P+P      +P V+    S  ML F
Sbjct: 174 PPCTVPCLCRYAMTPERVHRLRAAQVKQFTVCSSFPLPKYK---IPGVQRVACSAVML-F 229

Query: 225 NIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTT 404
           N HD       R  R   ++    ++      LD      S +EY P    +P PL    
Sbjct: 230 N-HDVPALVSPRKYREPSISSESSSSGLSVFDLD----IGSDSEYEPMEPVQPEPLIDLA 284

Query: 405 IVEK 416
           +VE+
Sbjct: 285 VVEE 288



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>BCLX_RAT (P53563) Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)|
          Length = 233

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = -1

Query: 274 PERFPRTIASRNPSWMLNDSISHEYILVLTGGRISAEARGI-----GRQLAADPGGSSRL 110
           PER   +  + NPSW L DS +   +   TG   S +AR +      +Q   + G    L
Sbjct: 43  PERETPSAINGNPSWHLADSPA---VNGATGHSSSLDAREVIPMAAVKQALREAGDEFEL 99

Query: 109 RMRWRFLSVSQNSSSQGKVVPGSAY 35
           R R  F     + +SQ  + PG+AY
Sbjct: 100 RYRRAF----SDLTSQLHITPGTAY 120



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>CHRD_HUMAN (Q9H2X0) Chordin precursor|
          Length = 955

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 147 LPIPLASAEILPPVRTKMYSWEMLSFNIH 233
           LP+PLA A +LPPV+++      LS + H
Sbjct: 534 LPVPLAGALVLPPVKSQAAGHAWLSLDTH 562



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>SUREJ_STRPU (Q26627) Sperm receptor for egg jelly precursor (suREJ)|
          Length = 1450

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 10/152 (6%)
 Frame = +3

Query: 3   HEVVPSRHLXRYAEPGTTLPCEDEFWLTDKNLHRIRKRELPP------GSAASCLPIPLA 164
           H+ V  RHL +       L C+D      K  H +   + PP         A+   IP  
Sbjct: 295 HDCVSIRHLEKTDRYWFFLGCDDTVTSICKRPHEVVATQAPPYLFTTTDVPATTTTIPTT 354

Query: 165 SAEILPPVRT--KMYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNL--CQCETLDDI 332
           +  I    RT   M   E+L F  +   ++ I R N + L+T +   +      + L  I
Sbjct: 355 TTTISATTRTIDAMILIELLLFPNNVSSIDNIFRVNNTILVTASVLGSFQALSSQILWSI 414

Query: 333 KMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 428
             HLS       + +E + L   T V   T+K
Sbjct: 415 TNHLSGDSVQYTVYSEDAVLVRFTTVSIFTIK 446



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>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            [Contains: Transforming protein Int-3; Notch 4
            extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = -1

Query: 163  ARGIGRQLAADPGGSSRLRMRWRFLSV-------SQNSSSQGKVVPGSAYLLRCR 20
            ARG+  Q    PG  +R R  W  L++       +Q + +  +  PG     RCR
Sbjct: 1787 ARGLRDQAGLAPGDVARQRSHWDLLTLLEGAGPTTQEARAHARTTPGGGAAARCR 1841



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>SIM_DROME (P05709) Protein single-minded|
          Length = 697

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +2

Query: 260 GEPLGTPHPSRLQ-QPLPVRDPRRHQDAPLRHRVRSIPPERTFSLAHNNNRREVH 421
           G+P+G   P  L     P  DP    + PL+  V  +PP    S + NNN    H
Sbjct: 466 GQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSSSSSNNNNGVWH 520



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>CG021_HUMAN (Q9BVT8) Protein C7orf21 (SB144)|
          Length = 246

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +2

Query: 245 GGDRAGEPLGTPHPSRLQQPLPVRDPRRHQDAP------LRHRVRSIPPE 376
           GGD   +P GTP PS+    +   D  R  +AP      LRHR ++  PE
Sbjct: 36  GGDPLPQPSGTPTPSQPSAAMAATDSMR-GEAPGAETPSLRHRGQAAQPE 84



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>MURB_RHOS4 (Q3J4L9) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 308

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = -1

Query: 208 HEYILVLTGGRISAEARGIGRQLAADPGGSSRLRMRWRFLSVSQ 77
           H   L+  GG  +A+  G+G ++      SS +R+ W  + V +
Sbjct: 259 HSNFLINAGGATAADLEGLGEEVIKRVFQSSGIRLEWEIMRVGE 302



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>POLN_SINDV (P03317) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2512

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 39   AEPGTTLPCEDEFWLTDKNLHRIRKRELPPGSAASCLPIP 158
            + P  TLPC   + +T + +HR+R   +   +  S  P+P
Sbjct: 1602 SSPPKTLPCLCMYAMTPERVHRLRSNNVKEVTVCSSTPLP 1641



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>POLN_SINDO (P27283) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2514

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 39   AEPGTTLPCEDEFWLTDKNLHRIRKRELPPGSAASCLPIP 158
            + P  TLPC   + +T + +HR+R   +   +  S  P+P
Sbjct: 1602 SSPPKTLPCLCMYAMTPERVHRLRSNNVKEVTVCSSTPLP 1641



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>VATC_METJA (Q57672) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase|
           subunit C)
          Length = 381

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 240 FLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKC 419
           ++ A +R   + L   A  N L +  +L+++   L  T+YG Y+    + L     VEK 
Sbjct: 39  YVNARIRSKEAKLFDDAKLNELIESGSLEELVGLLEDTDYGQYVIEVMNELKDPVAVEKA 98

Query: 420 -TLKLVDEY 443
             + L D Y
Sbjct: 99  LDMYLADLY 107



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>PQQF_PSEAE (Q9I2D2) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)|
           (Pyrroloquinoline quinone biosynthesis protein F)
          Length = 775

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +2

Query: 197 DVLVGDAVVQHPRWVPGGDRAGEPLGTPHPSRLQQPLPVRDPRRHQ 334
           D LV  A +  PRW+P G  AGE L         +PLP R P RH+
Sbjct: 565 DALVMQAAMPDPRWMP-GQAAGERL---------EPLPPR-PGRHR 599



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>ENTF_ECOLI (P11454) Enterobactin synthetase component F (EC 2.7.7.-)|
           (Enterochelin synthase F) (Serine-activating enzyme)
           (Seryl-AMP ligase)
          Length = 1293

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 66  EDEFWLTDKNLHRIRKRELPPGSAASCLPIP--LASAEIL 179
           E E W  D      ++R+LPP ++ S  P+P   ASA+IL
Sbjct: 186 ESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGRSASADIL 225



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>K1914_HUMAN (Q8N4X5) Protein KIAA1914|
          Length = 818

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 312 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKL 431
           C+  D  + +LSA+EYG  +   P    T  + +KC+  L
Sbjct: 292 CQKPDIAEKYLSASEYGSSVDGHPEVPETKDVKKKCSAGL 331



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>BIOB_YEAST (P32451) Biotin synthase, mitochondrial precursor (EC 2.8.1.6)|
           (Biotin synthetase)
          Length = 375

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 40  LSPARPCLVKTNSG*QIKISTASASANSLPDLQLA 144
           LS ARP L K  +   +K +TAS+ A++L  LQ A
Sbjct: 9   LSTARPALTKYATNAAVKSTTASSEASTLGALQYA 43



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>BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (BCL-2-binding|
           athanogene-1) (BAG-1)
          Length = 355

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 242 PGGDRAGEPLGTPHPSRLQQPLPVRDPRRHQDAPLRHRVRSIPPERTFSL 391
           P GDR  EPLG     RL+ P P R+PR+ +        R +PP +  S+
Sbjct: 10  PRGDR--EPLGP----RLRAPRPAREPRQSES----RAERGLPPSQRSSV 49



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>ITM2B_CHICK (O42204) Integral membrane protein 2B (Transmembrane protein E3-16)|
          Length = 262

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 185 RRKDLGRGEGDREAASCRSGREFALADAVEIFICQ 81
           +RK+  +G   REA +CR  R F    A+E  IC+
Sbjct: 227 QRKEAMKGIQKREAVNCRKIRHFENRFAMETLICE 261



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>ATF6B_HUMAN (Q99941) Cyclic AMP-dependent transcription factor ATF-6 beta|
           (Activating transcription factor 6 beta) (ATF6-beta)
           (cAMP-responsive element-binding protein-like 1) (cAMP
           response element-binding protein-related protein)
           (Creb-rp) (Protein G13
          Length = 703

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +3

Query: 270 SGLLTQADYNNLCQ--CETLDDIKMHLSATEYGPYLQNEPSP 389
           SG     DY  + Q  CE +D   +H+  +   P L+ +PSP
Sbjct: 631 SGRGAPGDYEEMMQIECEVMDTRVIHIKTSTVPPSLRKQPSP 672



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>KUP_XYLFA (Q9PC78) Probable potassium transport system protein kup|
          Length = 634

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = -1

Query: 262 PRTIASRNPSWMLNDSISHEYILVLTGGRISAEARGIGRQLAADPG--GSSRLRMRWRFL 89
           P  + + NPSW L+  + H +  +   G +     G G  L AD G  G+  +R  W ++
Sbjct: 203 PEVLHAINPSWGLHFFLEHGWHSMFVLGAVVLAVTG-GEALYADMGHFGAKAIRHAWMYV 261

Query: 88  ---SVSQNSSSQGKVV 50
               ++ N   QG +V
Sbjct: 262 VLPMLALNYLGQGALV 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,612,409
Number of Sequences: 219361
Number of extensions: 1803481
Number of successful extensions: 5877
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5865
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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