| Clone Name | bags33h21 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 207 bits (527), Expect = 1e-53 Identities = 96/112 (85%), Positives = 105/112 (93%) Frame = +3 Query: 198 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 377 MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQN Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQN 60 Query: 378 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLI Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLI 112
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 204 bits (519), Expect = 1e-52 Identities = 95/112 (84%), Positives = 104/112 (92%) Frame = +3 Query: 198 MYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 377 MY +E L+FNIH G+LEAIVRG+R+GLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQN Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQN 60 Query: 378 EPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 EPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+YI YGHMIDNVVLI Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLI 112
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 145 bits (366), Expect = 7e-35 Identities = 65/107 (60%), Positives = 87/107 (81%) Frame = +3 Query: 213 MLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 392 + +FN DG+LEAI+RG + G+L++ADYNNLCQC+ L+D+KMH +T+YG +L EPSP+ Sbjct: 12 LFTFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPI 71 Query: 393 HTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 HTTTI EK T KLV E+ H+ QA EPLSTF+ +I+YG+MIDNVVL+ Sbjct: 72 HTTTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLL 118
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 127 bits (319), Expect = 2e-29 Identities = 59/104 (56%), Positives = 78/104 (75%) Frame = +3 Query: 222 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 401 FNI +G+LE + RG + G+L QADY NL QCETL+D+K+HL T+YG +L NEPSPL + Sbjct: 8 FNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVS 67 Query: 402 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 I +K KLV E++HM A EPLS FL +ITYG+MIDN++L+ Sbjct: 68 VIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILL 111
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 124 bits (312), Expect = 1e-28 Identities = 57/106 (53%), Positives = 82/106 (77%) Frame = +3 Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 + I +K K+V E++HM A EPL++FL +ITY +MIDNV+L+ Sbjct: 67 VSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 124 bits (311), Expect = 2e-28 Identities = 57/104 (54%), Positives = 78/104 (75%) Frame = +3 Query: 222 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 401 FNI G+LE + RG + G+L Q+DY NL QCETL+D+K+HL T+YG +L NEPSPL + Sbjct: 6 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 65 Query: 402 TIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 TI +K KLV E++H+ + EPLSTFL +ITY +MIDN++L+ Sbjct: 66 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILL 109
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 123 bits (309), Expect = 3e-28 Identities = 56/106 (52%), Positives = 82/106 (77%) Frame = +3 Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 123 bits (309), Expect = 3e-28 Identities = 56/106 (52%), Positives = 82/106 (77%) Frame = +3 Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 123 bits (309), Expect = 3e-28 Identities = 56/106 (52%), Positives = 82/106 (77%) Frame = +3 Query: 216 LSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 395 L FN+ +G+LE +VRG ++G+L+QADY NL QCETL+D+K+HL +T+YG +L NE SPL Sbjct: 7 LYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLT 66 Query: 396 TTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 + I ++ K+V E++HM A EPL++FL +ITY +MIDNV+L+ Sbjct: 67 VSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILL 112
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 106 bits (264), Expect = 5e-23 Identities = 53/108 (49%), Positives = 78/108 (72%) Frame = +3 Query: 210 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 389 + LSFN + G++EA+VRG S LL Q Y+NL QCE+L+D ++ LS+T+YG +L N+ S Sbjct: 2 DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SK 60 Query: 390 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 L ++ I K T KL+DE+ + QA+E LS F+ YITY +MIDN++L+ Sbjct: 61 LTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLL 108
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 99.4 bits (246), Expect = 6e-21 Identities = 47/108 (43%), Positives = 72/108 (66%) Frame = +3 Query: 210 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 389 E L FN+++G++E IVRG R+ LLT +Y N+ QCE++DD+K+ L YG +L + P Sbjct: 2 EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPK 60 Query: 390 LHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 T+ + K T KLV E++++ A L+ F+ Y+TYG+MIDNV L+ Sbjct: 61 PSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALL 108
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 99.0 bits (245), Expect = 7e-21 Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 1/109 (0%) Frame = +3 Query: 210 EMLSFNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 389 E + FNI +GF+E +VRG R+GLL+ Y NL QC+TL+D+K+ LS+T+YG +L + S Sbjct: 2 EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSE 61 Query: 390 LHTTTIV-EKCTLKLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 TT+++ E + KL E+ ++ Q++ F+ YITYG+MIDNV L+ Sbjct: 62 SLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALM 110
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 86.3 bits (212), Expect = 5e-17 Identities = 41/105 (39%), Positives = 68/105 (64%), Gaps = 1/105 (0%) Frame = +3 Query: 222 FNIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 401 FN G+LEA+ RG ++G+L +DY NL QCE+L+D+ + + T+YG E S + Sbjct: 5 FNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQS-APSV 63 Query: 402 TIVEKCTL-KLVDEYKHMLCQANEPLSTFLQYITYGHMIDNVVLI 533 ++E+C +L+ +Y ++ + EPL+TF+++I Y MIDNV L+ Sbjct: 64 EVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALL 108
>P3C2B_HUMAN (O00750) Phosphatidylinositol-4-phosphate 3-kinase C2| domain-containing beta polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-beta) (PtdIns-3-kinase C2 beta) (PI3K-C2beta) (C2-PI3K) Length = 1634 Score = 35.4 bits (80), Expect = 0.100 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 5/109 (4%) Frame = +3 Query: 66 EDEFWLTDKNLHRIRKRELPPGSAASCLPIPLASA-----EILPPVRTKMYSWEMLSFNI 230 E +WLTD + R+ ++ S S LP+ LASA LP + + W ++ Sbjct: 826 ESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYVLLKQWTHMNHQD 885 Query: 231 HDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQN 377 G L A + +L E LD + + A +Y YL + Sbjct: 886 ALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDS 934
>LTBP2_BOVIN (Q28019) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1842 Score = 33.5 bits (75), Expect = 0.38 Identities = 27/90 (30%), Positives = 32/90 (35%) Frame = +2 Query: 101 PHPQARTPSRICXXXXXXXXXXXXXXXSGENQDVLVGDAVVQHPRWVPGGDRAGEPLGTP 280 P P R P R G++Q V +V Q WVPGG LGTP Sbjct: 753 PRPAERQPLR---AATGTWVEAETIPDKGDSQASQVTTSVTQLSTWVPGG-----ALGTP 804 Query: 281 HPSRLQQPLPVRDPRRHQDAPLRHRVRSIP 370 PS +Q +P AP V P Sbjct: 805 TPSVPEQGIPEAREEAQVTAPTNVLVTPAP 834
>LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 420 Score = 32.3 bits (72), Expect = 0.85 Identities = 23/54 (42%), Positives = 27/54 (50%) Frame = -3 Query: 281 EESRAVPPHDRLQEPIVDVERQHLPRVHLGSHRRKDLGRGEGDREAASCRSGRE 120 EE AVP H +PI DVE + +V +GS GR REAA GRE Sbjct: 271 EEQVAVPHHPDNVKPISDVEGTEINQVFIGSCTN---GRLSDLREAAKYLKGRE 321
>CHRD_MOUSE (Q9Z0E2) Chordin precursor| Length = 948 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 147 LPIPLASAEILPPVRTKMYSWEMLSFNIH 233 LP+PLA A +LPPVR++ LS + H Sbjct: 530 LPVPLAGALVLPPVRSQAAGHAWLSLDTH 558
>VATC_DESSY (O06502) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 364 Score = 31.6 bits (70), Expect = 1.4 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Frame = +3 Query: 249 AIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 428 A ++ + LLT+ +N L + TL + ++L T+Y YL + S +T VEK + Sbjct: 38 ARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSS--YTVEEVEKALER 95 Query: 429 -LVDEYKHMLCQANEPLSTFLQYITYGHMIDNV 524 L Y+ M + F + + G + N+ Sbjct: 96 ALAGTYELMFKILPKRSKGFFELLLEGWDVRNI 128
>POLN_MIDDV (P03318) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: Nonstructural protein 3 (nsP3); Nonstructural protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Nonstructural protein 4) (nsP4)] (Fragment) Length = 994 Score = 31.2 bits (69), Expect = 1.9 Identities = 33/124 (26%), Positives = 53/124 (42%) Frame = +3 Query: 45 PGTTLPCEDEFWLTDKNLHRIRKRELPPGSAASCLPIPLASAEILPPVRTKMYSWEMLSF 224 P T+PC + +T + +HR+R ++ + S P+P +P V+ S ML F Sbjct: 174 PPCTVPCLCRYAMTPERVHRLRAAQVKQFTVCSSFPLPKYK---IPGVQRVACSAVML-F 229 Query: 225 NIHDGFLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTT 404 N HD R R ++ ++ LD S +EY P +P PL Sbjct: 230 N-HDVPALVSPRKYREPSISSESSSSGLSVFDLD----IGSDSEYEPMEPVQPEPLIDLA 284 Query: 405 IVEK 416 +VE+ Sbjct: 285 VVEE 288
>BCLX_RAT (P53563) Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)| Length = 233 Score = 31.2 bits (69), Expect = 1.9 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Frame = -1 Query: 274 PERFPRTIASRNPSWMLNDSISHEYILVLTGGRISAEARGI-----GRQLAADPGGSSRL 110 PER + + NPSW L DS + + TG S +AR + +Q + G L Sbjct: 43 PERETPSAINGNPSWHLADSPA---VNGATGHSSSLDAREVIPMAAVKQALREAGDEFEL 99 Query: 109 RMRWRFLSVSQNSSSQGKVVPGSAY 35 R R F + +SQ + PG+AY Sbjct: 100 RYRRAF----SDLTSQLHITPGTAY 120
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 30.8 bits (68), Expect = 2.5 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 147 LPIPLASAEILPPVRTKMYSWEMLSFNIH 233 LP+PLA A +LPPV+++ LS + H Sbjct: 534 LPVPLAGALVLPPVKSQAAGHAWLSLDTH 562
>SUREJ_STRPU (Q26627) Sperm receptor for egg jelly precursor (suREJ)| Length = 1450 Score = 30.4 bits (67), Expect = 3.2 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 10/152 (6%) Frame = +3 Query: 3 HEVVPSRHLXRYAEPGTTLPCEDEFWLTDKNLHRIRKRELPP------GSAASCLPIPLA 164 H+ V RHL + L C+D K H + + PP A+ IP Sbjct: 295 HDCVSIRHLEKTDRYWFFLGCDDTVTSICKRPHEVVATQAPPYLFTTTDVPATTTTIPTT 354 Query: 165 SAEILPPVRT--KMYSWEMLSFNIHDGFLEAIVRGNRSGLLTQADYNNL--CQCETLDDI 332 + I RT M E+L F + ++ I R N + L+T + + + L I Sbjct: 355 TTTISATTRTIDAMILIELLLFPNNVSSIDNIFRVNNTILVTASVLGSFQALSSQILWSI 414 Query: 333 KMHLSATEYGPYLQNEPSPLHTTTIVEKCTLK 428 HLS + +E + L T V T+K Sbjct: 415 TNHLSGDSVQYTVYSEDAVLVRFTTVSIFTIK 446
>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)| [Contains: Transforming protein Int-3; Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 1964 Score = 30.0 bits (66), Expect = 4.2 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = -1 Query: 163 ARGIGRQLAADPGGSSRLRMRWRFLSV-------SQNSSSQGKVVPGSAYLLRCR 20 ARG+ Q PG +R R W L++ +Q + + + PG RCR Sbjct: 1787 ARGLRDQAGLAPGDVARQRSHWDLLTLLEGAGPTTQEARAHARTTPGGGAAARCR 1841
>SIM_DROME (P05709) Protein single-minded| Length = 697 Score = 30.0 bits (66), Expect = 4.2 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +2 Query: 260 GEPLGTPHPSRLQ-QPLPVRDPRRHQDAPLRHRVRSIPPERTFSLAHNNNRREVH 421 G+P+G P L P DP + PL+ V +PP S + NNN H Sbjct: 466 GQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTPVPPTNNSSSSSNNNNGVWH 520
>CG021_HUMAN (Q9BVT8) Protein C7orf21 (SB144)| Length = 246 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Frame = +2 Query: 245 GGDRAGEPLGTPHPSRLQQPLPVRDPRRHQDAP------LRHRVRSIPPE 376 GGD +P GTP PS+ + D R +AP LRHR ++ PE Sbjct: 36 GGDPLPQPSGTPTPSQPSAAMAATDSMR-GEAPGAETPSLRHRGQAAQPE 84
>MURB_RHOS4 (Q3J4L9) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 308 Score = 29.6 bits (65), Expect = 5.5 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = -1 Query: 208 HEYILVLTGGRISAEARGIGRQLAADPGGSSRLRMRWRFLSVSQ 77 H L+ GG +A+ G+G ++ SS +R+ W + V + Sbjct: 259 HSNFLINAGGATAADLEGLGEEVIKRVFQSSGIRLEWEIMRVGE 302
>POLN_SINDV (P03317) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2512 Score = 29.6 bits (65), Expect = 5.5 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3 Query: 39 AEPGTTLPCEDEFWLTDKNLHRIRKRELPPGSAASCLPIP 158 + P TLPC + +T + +HR+R + + S P+P Sbjct: 1602 SSPPKTLPCLCMYAMTPERVHRLRSNNVKEVTVCSSTPLP 1641
>POLN_SINDO (P27283) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2514 Score = 29.6 bits (65), Expect = 5.5 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3 Query: 39 AEPGTTLPCEDEFWLTDKNLHRIRKRELPPGSAASCLPIP 158 + P TLPC + +T + +HR+R + + S P+P Sbjct: 1602 SSPPKTLPCLCMYAMTPERVHRLRSNNVKEVTVCSSTPLP 1641
>VATC_METJA (Q57672) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 381 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +3 Query: 240 FLEAIVRGNRSGLLTQADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKC 419 ++ A +R + L A N L + +L+++ L T+YG Y+ + L VEK Sbjct: 39 YVNARIRSKEAKLFDDAKLNELIESGSLEELVGLLEDTDYGQYVIEVMNELKDPVAVEKA 98 Query: 420 -TLKLVDEY 443 + L D Y Sbjct: 99 LDMYLADLY 107
>PQQF_PSEAE (Q9I2D2) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 775 Score = 29.6 bits (65), Expect = 5.5 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = +2 Query: 197 DVLVGDAVVQHPRWVPGGDRAGEPLGTPHPSRLQQPLPVRDPRRHQ 334 D LV A + PRW+P G AGE L +PLP R P RH+ Sbjct: 565 DALVMQAAMPDPRWMP-GQAAGERL---------EPLPPR-PGRHR 599
>ENTF_ECOLI (P11454) Enterobactin synthetase component F (EC 2.7.7.-)| (Enterochelin synthase F) (Serine-activating enzyme) (Seryl-AMP ligase) Length = 1293 Score = 28.9 bits (63), Expect = 9.3 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = +3 Query: 66 EDEFWLTDKNLHRIRKRELPPGSAASCLPIP--LASAEIL 179 E E W D ++R+LPP ++ S P+P ASA+IL Sbjct: 186 ESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGRSASADIL 225
>K1914_HUMAN (Q8N4X5) Protein KIAA1914| Length = 818 Score = 28.9 bits (63), Expect = 9.3 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +3 Query: 312 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKL 431 C+ D + +LSA+EYG + P T + +KC+ L Sbjct: 292 CQKPDIAEKYLSASEYGSSVDGHPEVPETKDVKKKCSAGL 331
>BIOB_YEAST (P32451) Biotin synthase, mitochondrial precursor (EC 2.8.1.6)| (Biotin synthetase) Length = 375 Score = 28.9 bits (63), Expect = 9.3 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +1 Query: 40 LSPARPCLVKTNSG*QIKISTASASANSLPDLQLA 144 LS ARP L K + +K +TAS+ A++L LQ A Sbjct: 9 LSTARPALTKYATNAAVKSTTASSEASTLGALQYA 43
>BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (BCL-2-binding| athanogene-1) (BAG-1) Length = 355 Score = 28.9 bits (63), Expect = 9.3 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +2 Query: 242 PGGDRAGEPLGTPHPSRLQQPLPVRDPRRHQDAPLRHRVRSIPPERTFSL 391 P GDR EPLG RL+ P P R+PR+ + R +PP + S+ Sbjct: 10 PRGDR--EPLGP----RLRAPRPAREPRQSES----RAERGLPPSQRSSV 49
>ITM2B_CHICK (O42204) Integral membrane protein 2B (Transmembrane protein E3-16)| Length = 262 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 185 RRKDLGRGEGDREAASCRSGREFALADAVEIFICQ 81 +RK+ +G REA +CR R F A+E IC+ Sbjct: 227 QRKEAMKGIQKREAVNCRKIRHFENRFAMETLICE 261
>ATF6B_HUMAN (Q99941) Cyclic AMP-dependent transcription factor ATF-6 beta| (Activating transcription factor 6 beta) (ATF6-beta) (cAMP-responsive element-binding protein-like 1) (cAMP response element-binding protein-related protein) (Creb-rp) (Protein G13 Length = 703 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = +3 Query: 270 SGLLTQADYNNLCQ--CETLDDIKMHLSATEYGPYLQNEPSP 389 SG DY + Q CE +D +H+ + P L+ +PSP Sbjct: 631 SGRGAPGDYEEMMQIECEVMDTRVIHIKTSTVPPSLRKQPSP 672
>KUP_XYLFA (Q9PC78) Probable potassium transport system protein kup| Length = 634 Score = 28.9 bits (63), Expect = 9.3 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%) Frame = -1 Query: 262 PRTIASRNPSWMLNDSISHEYILVLTGGRISAEARGIGRQLAADPG--GSSRLRMRWRFL 89 P + + NPSW L+ + H + + G + G G L AD G G+ +R W ++ Sbjct: 203 PEVLHAINPSWGLHFFLEHGWHSMFVLGAVVLAVTG-GEALYADMGHFGAKAIRHAWMYV 261 Query: 88 ---SVSQNSSSQGKVV 50 ++ N QG +V Sbjct: 262 VLPMLALNYLGQGALV 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,612,409 Number of Sequences: 219361 Number of extensions: 1803481 Number of successful extensions: 5877 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5531 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5865 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)