ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy ... 61 9e-10
2TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein ... 60 1e-09
3TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name... 60 1e-09
4TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1 60 1e-09
5YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 i... 55 4e-08
6MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) 33 0.27
7RL72_ARATH (P60039) 60S ribosomal protein L7-2 29 4.0
8AT12A_RAT (P54708) Potassium-transporting ATPase alpha chain 2 (... 28 5.2
9CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel al... 28 6.8
10POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1.... 28 8.8

>TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy cell leukemia|
           protein 1)
          Length = 260

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 26/54 (48%), Positives = 42/54 (77%)
 Frame = +3

Query: 3   QKEARSVKKNSKDARKLLGAKGKRFAKKRYAEKAQMKKTLKMHDESSSRQKVDD 164
           +KE+R   + SK A+K++G K K + K+R+AEK QMKKT+KMH++ +++QK D+
Sbjct: 26  KKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDE 79



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>TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein CDK105)|
          Length = 260

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 26/54 (48%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   QKEARSVKKNSKDARKLLGAKGKRFAKKRYAEKAQMKKTLKMHDESSSRQKVDD 164
           +KE R   + SK A+K++G K K + K+R+AEK QMKKT+KMH++ +++QK D+
Sbjct: 26  KKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDE 79



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>TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name-related|
           protein 42) (LNR42)
          Length = 260

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 26/54 (48%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   QKEARSVKKNSKDARKLLGAKGKRFAKKRYAEKAQMKKTLKMHDESSSRQKVDD 164
           +KE R   + SK A+K++G K K + K+R+AEK QMKKT+KMH++ +++QK D+
Sbjct: 26  KKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDE 79



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>TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1|
          Length = 260

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 26/54 (48%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   QKEARSVKKNSKDARKLLGAKGKRFAKKRYAEKAQMKKTLKMHDESSSRQKVDD 164
           +KE R   + SK A+K++G K K + K+R+AEK QMKKT+KMH++ +++QK D+
Sbjct: 26  KKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDE 79



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>YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 intergenic|
           region
          Length = 261

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
 Frame = +3

Query: 3   QKEARSVKKNSKDARKLLGAKGKRFAKKRYAEKAQMKKTLKMHDES---SSRQKVDDD 167
           ++EAR   K S+ A+KL G KGK+FAKKRYAEK  M+K +K H++S    S + +D D
Sbjct: 26  KREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTD 83



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>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +3

Query: 9   EARSVKKNSKDARKLLGAKGK--RFAKKRYAEKAQMKKTLKMHDESSSRQKVD 161
           E   +KK +K  +K L  K K    AKK+ AEK + K+  K   E++ ++K +
Sbjct: 746 EKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCE 798



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>RL72_ARATH (P60039) 60S ribosomal protein L7-2|
          Length = 242

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +3

Query: 9   EARSVKKNSKDARKLLGAKGKRFAKKRYAEK 101
           EA + KK S +ARKL+  + +++AK+ YAEK
Sbjct: 29  EAVAAKKKSVEARKLIFKRAEQYAKE-YAEK 58



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>AT12A_RAT (P54708) Potassium-transporting ATPase alpha chain 2 (EC 3.6.3.10)|
           (Proton pump) (Non-gastric H(+)/K(+) ATPase alpha
           subunit)
          Length = 1036

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 30  NSKDARKLLGAKGKRFAKKRYAEKAQMKKTLKMHDESSSRQKVD 161
           + +D +K  GAK K     +  EK ++KK L + D   S  +++
Sbjct: 22  DQRDDKKFKGAKNKDLEPNKSHEKEELKKELDLDDHRLSNTELE 65



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>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.2)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 1,
            cardiac muscle) (Smooth muscle calcium channel blocker
            receptor)
          Length = 2171

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 14   ALRQEELQGCPQAARC*GQEVRQEAVCREGADEEDLEDAR 133
            A+R +E      + RC  QE +    C+EGA ++D  D R
Sbjct: 1831 AVRAQEAAWKLSSKRCHSQESQIAMACQEGASQDDNYDVR 1870



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>POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           2)
          Length = 750

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
 Frame = +2

Query: 2   AEGGALRQEELQG----C-PQAARC*GQEVRQEAVCR 97
           A GG L + EL+     C PQAAR  G++V  EAV R
Sbjct: 4   ATGGGLAESELRPRRGRCGPQAARAAGRDVAAEAVAR 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,008,400
Number of Sequences: 219361
Number of extensions: 165807
Number of successful extensions: 806
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 80,573,946
effective HSP length: 33
effective length of database: 73,335,033
effective search space used: 1760040792
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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