ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479475.1| Oryza sativa (japonica cultivar-group), mRNA 168 4e-39
2ref|XM_507411.1| PREDICTED Oryza sativa (japonica cultivar-group... 168 4e-39
3ref|XM_506559.2| PREDICTED Oryza sativa (japonica cultivar-group... 168 4e-39
4dbj|AK104794.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 4e-39
5dbj|AK103678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 4e-39
6dbj|AK060100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 4e-39
7gb|BT017352.1| Zea mays clone EL01N0323H03.c mRNA sequence 121 7e-25
8gb|AY105049.1| Zea mays PCO112338 mRNA sequence 121 7e-25
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
10dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
11gb|BT024045.1| Zea mays clone EL01N0430D01 mRNA sequence 105 4e-20
12gb|BT016999.1| Zea mays clone EK07D2309D06.c mRNA sequence 76 4e-11
13gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 50 0.002
14ref|NM_208707.1| Eremothecium gossypii ACL050Wp (ACL050W), mRNA 50 0.002
15gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Can... 46 0.035
16ref|XM_503781.1| Yarrowia lipolytica CLIB122, YALI0E10461g predi... 44 0.14
17emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 44 0.14
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.54
19dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.54
20dbj|AK112629.1| Ciona intestinalis cDNA, clone:cieg019d08, full ... 42 0.54
21ref|XM_520999.1| PREDICTED: Pan troglodytes similar to Lamina-as... 40 2.2
22ref|XM_509288.1| PREDICTED: Pan troglodytes thymopoietin (LOC452... 40 2.2
23ref|XM_428989.1| PREDICTED: Gallus gallus similar to Dimethylani... 40 2.2
24gb|AE009067.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 2.2
25ref|NM_001032283.1| Homo sapiens thymopoietin (TMPO), transcript... 40 2.2
26gb|BC053675.1| Homo sapiens thymopoietin, transcript variant 2, ... 40 2.2
27gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, com... 40 2.2
28gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 2.2
29gb|AC013418.32| Homo sapiens 12 BAC RP11-181C3 (Roswell Park Can... 40 2.2
30dbj|AK110102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
31gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromos... 40 2.2
32gb|U09087.1|HSU09087 Human thymopoietin beta mRNA, complete cds 40 2.2
33gb|BC108623.1| Xenopus laevis cDNA clone MGC:131227 IMAGE:739073... 38 8.5
34gb|AF157953.1| Marmota monax isolate Swc1 cytochrome b (cytb) ge... 38 8.5
35gb|AY505491.1| Marmota monax cytochrome b (cytb) gene, partial c... 38 8.5
36ref|XM_388647.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 38 8.5
37ref|XM_645613.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 8.5
38gb|AF100719.1| Marmota monax cytochrome b (cyt b) gene, complete... 38 8.5
39emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section... 38 8.5
40emb|Z49884.1|BSNARYWI B.subtilis nar[G,H,I,J,K], ywi[C,D,E] and ... 38 8.5
41emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 38 8.5
42gb|AF064684.1| Ateles paniscus chamek cardiac beta-myosin heavy ... 38 8.5
43emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in ... 38 8.5
44emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 i... 38 8.5
45emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 ... 38 8.5
46gb|AF143934.1|AF143934 Marmota monax clone ASU_16756 cytochrome ... 38 8.5
47gb|AC107627.3| Homo sapiens chromosome 1 clone RP1-281L18, compl... 38 8.5
48gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 38 8.5
49ref|NM_174727.1| Bos taurus myosin, heavy polypeptide 7, cardiac... 38 8.5
50ref|XM_392325.2| PREDICTED: Apis mellifera similar to ENSANGP000... 38 8.5
51gb|AF229810.1|AF229810 Felis catus slow myosin heavy chain (MyHC... 38 8.5
52gb|AY303349.1| Enterobacteria phage RB69, complete genome 38 8.5
53dbj|AB059400.1| Bos taurus MyHC-slow mRNA for myosin heavy chain... 38 8.5
54ref|XM_320593.2| Anopheles gambiae str. PEST ENSANGP00000015219 ... 38 8.5
55gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete... 38 8.5
56emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 8.5
57emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in l... 38 8.5
58dbj|AP000721.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 38 8.5
59emb|AJ830933.1| Bacteriophage TuIa vs.4 gene for gpvs.4 and vs.3... 38 8.5
60emb|AJ830932.1| Bacteriophage RB69 vs.4 gene for gpvs.4 and vs.3... 38 8.5
61dbj|AB088367.1| Equus caballus MyHC-slow mRNA for myosin heavy c... 38 8.5 
>ref|XM_479475.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1039

 Score =  168 bits (85), Expect = 4e-39
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  tccaaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtat 92
           |||| |||||||||  || |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 160 tccagggatgcccggcagttgcttggtgctaagggtaagaggttcgccaagaagcggtat 219

                                                                       
Query: 93  gccgagaaggcgcagatgaagaagaccttgaagatgcacgacgagtcttcttcccggcag 152
           ||||||||||| ||||||||||||||| |||| ||||||||||||||  |||| ||||||
Sbjct: 220 gccgagaaggcacagatgaagaagaccctgaaaatgcacgacgagtcaacttctcggcag 279

                        
Query: 153 aaggttgatgatg 165
           |||||||||||||
Sbjct: 280 aaggttgatgatg 292
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>ref|XM_507411.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA
          Length = 1041

 Score =  168 bits (85), Expect = 4e-39
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  tccaaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtat 92
           |||| |||||||||  || |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 160 tccagggatgcccggcagttgcttggtgctaagggtaagaggttcgccaagaagcggtat 219

                                                                       
Query: 93  gccgagaaggcgcagatgaagaagaccttgaagatgcacgacgagtcttcttcccggcag 152
           ||||||||||| ||||||||||||||| |||| ||||||||||||||  |||| ||||||
Sbjct: 220 gccgagaaggcacagatgaagaagaccctgaaaatgcacgacgagtcaacttctcggcag 279

                        
Query: 153 aaggttgatgatg 165
           |||||||||||||
Sbjct: 280 aaggttgatgatg 292
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>ref|XM_506559.2| PREDICTED Oryza sativa (japonica cultivar-group), P0470D12.138 mRNA
          Length = 1227

 Score =  168 bits (85), Expect = 4e-39
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  tccaaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtat 92
           |||| |||||||||  || |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 163 tccagggatgcccggcagttgcttggtgctaagggtaagaggttcgccaagaagcggtat 222

                                                                       
Query: 93  gccgagaaggcgcagatgaagaagaccttgaagatgcacgacgagtcttcttcccggcag 152
           ||||||||||| ||||||||||||||| |||| ||||||||||||||  |||| ||||||
Sbjct: 223 gccgagaaggcacagatgaagaagaccctgaaaatgcacgacgagtcaacttctcggcag 282

                        
Query: 153 aaggttgatgatg 165
           |||||||||||||
Sbjct: 283 aaggttgatgatg 295
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>dbj|AK104794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G01, full
           insert sequence
          Length = 1039

 Score =  168 bits (85), Expect = 4e-39
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  tccaaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtat 92
           |||| |||||||||  || |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 160 tccagggatgcccggcagttgcttggtgctaagggtaagaggttcgccaagaagcggtat 219

                                                                       
Query: 93  gccgagaaggcgcagatgaagaagaccttgaagatgcacgacgagtcttcttcccggcag 152
           ||||||||||| ||||||||||||||| |||| ||||||||||||||  |||| ||||||
Sbjct: 220 gccgagaaggcacagatgaagaagaccctgaaaatgcacgacgagtcaacttctcggcag 279

                        
Query: 153 aaggttgatgatg 165
           |||||||||||||
Sbjct: 280 aaggttgatgatg 292
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>dbj|AK103678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136C23, full
           insert sequence
          Length = 1225

 Score =  168 bits (85), Expect = 4e-39
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  tccaaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtat 92
           |||| |||||||||  || |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 162 tccagggatgcccggcagttgcttggtgctaagggtaagaggttcgccaagaagcggtat 221

                                                                       
Query: 93  gccgagaaggcgcagatgaagaagaccttgaagatgcacgacgagtcttcttcccggcag 152
           ||||||||||| ||||||||||||||| |||| ||||||||||||||  |||| ||||||
Sbjct: 222 gccgagaaggcacagatgaagaagaccctgaaaatgcacgacgagtcaacttctcggcag 281

                        
Query: 153 aaggttgatgatg 165
           |||||||||||||
Sbjct: 282 aaggttgatgatg 294
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>dbj|AK060100.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H11, full
           insert sequence
          Length = 1041

 Score =  168 bits (85), Expect = 4e-39
 Identities = 121/133 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  tccaaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtat 92
           |||| |||||||||  || |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 160 tccagggatgcccggcagttgcttggtgctaagggtaagaggttcgccaagaagcggtat 219

                                                                       
Query: 93  gccgagaaggcgcagatgaagaagaccttgaagatgcacgacgagtcttcttcccggcag 152
           ||||||||||| ||||||||||||||| |||| ||||||||||||||  |||| ||||||
Sbjct: 220 gccgagaaggcacagatgaagaagaccctgaaaatgcacgacgagtcaacttctcggcag 279

                        
Query: 153 aaggttgatgatg 165
           |||||||||||||
Sbjct: 280 aaggttgatgatg 292
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>gb|BT017352.1| Zea mays clone EL01N0323H03.c mRNA sequence
          Length = 1151

 Score =  121 bits (61), Expect = 7e-25
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                       
Query: 36  aaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtatgcc 95
           ||||||||||||||  || | ||||||||||||||||||||||||||||| || ||||| 
Sbjct: 264 aaggatgcccgcaatttgattggtgctaagggcaagaggttcgccaagaaacgctatgct 323

                                                    
Query: 96  gagaaggcgcagatgaagaagaccttgaagatgcacgacga 136
           |||||||| ||||||||||||||| |||| |||||||||||
Sbjct: 324 gagaaggcacagatgaagaagaccctgaaaatgcacgacga 364
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>gb|AY105049.1| Zea mays PCO112338 mRNA sequence
          Length = 1250

 Score =  121 bits (61), Expect = 7e-25
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                       
Query: 36  aaggatgcccgcaagctgctcggtgctaagggcaagaggttcgccaagaagcggtatgcc 95
           ||||||||||||||  || | ||||||||||||||||||||||||||||| || ||||| 
Sbjct: 355 aaggatgcccgcaatttgattggtgctaagggcaagaggttcgccaagaaacgctatgct 414

                                                    
Query: 96  gagaaggcgcagatgaagaagaccttgaagatgcacgacga 136
           |||||||| ||||||||||||||| |||| |||||||||||
Sbjct: 415 gagaaggcacagatgaagaagaccctgaaaatgcacgacga 455
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 3e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                            
Query: 52       tgctcggtgctaagggcaagaggttcgccaagaagcggtatgccgagaaggcgcagatga 111
                |||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 28397170 tgcttggtgctaagggtaagaggttcgccaagaagcggtatgccgagaaggcacagatga 28397111

                       
Query: 112      agaagac 118
                |||||||
Sbjct: 28397110 agaagac 28397104



 Score = 58.0 bits (29), Expect = 9e-06
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 121      tgaagatgcacgacgagtcttcttcccggcagaaggttgatgatg 165
                |||| ||||||||||||||  |||| |||||||||||||||||||
Sbjct: 28396789 tgaaaatgcacgacgagtcaacttctcggcagaaggttgatgatg 28396745
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score =  109 bits (55), Expect = 3e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 52     tgctcggtgctaagggcaagaggttcgccaagaagcggtatgccgagaaggcgcagatga 111
              |||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 122733 tgcttggtgctaagggtaagaggttcgccaagaagcggtatgccgagaaggcacagatga 122674

                     
Query: 112    agaagac 118
              |||||||
Sbjct: 122673 agaagac 122667



 Score = 58.0 bits (29), Expect = 9e-06
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 121    tgaagatgcacgacgagtcttcttcccggcagaaggttgatgatg 165
              |||| ||||||||||||||  |||| |||||||||||||||||||
Sbjct: 122352 tgaaaatgcacgacgagtcaacttctcggcagaaggttgatgatg 122308
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>gb|BT024045.1| Zea mays clone EL01N0430D01 mRNA sequence
          Length = 1191

 Score =  105 bits (53), Expect = 4e-20
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                       
Query: 57  ggtgctaagggcaagaggttcgccaagaagcggtatgccgagaaggcgcagatgaagaag 116
           |||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||
Sbjct: 289 ggtgctaagggcaagagggtcgccaagaaacgctatgctgagaaggcgcagatgaagaag 348

                            
Query: 117 accttgaagatgcacga 133
           ||| |||| ||||||||
Sbjct: 349 accctgaaaatgcacga 365
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>gb|BT016999.1| Zea mays clone EK07D2309D06.c mRNA sequence
          Length = 1116

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 61  ctaagggcaagaggttcgccaagaagcggtatgccgagaaggcgcagatgaagaagac 118
           |||||||||||||||| | |||||| || ||||| |||||||||||||||||||||||
Sbjct: 796 ctaagggcaagaggtttgtcaagaaacgctatgctgagaaggcgcagatgaagaagac 853
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 74     gttcgccaagaagcggtatgccgagaagg 102
              |||||| ||||||||||||||||||||||
Sbjct: 279161 gttcgcgaagaagcggtatgccgagaagg 279189
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>ref|NM_208707.1| Eremothecium gossypii ACL050Wp (ACL050W), mRNA
          Length = 786

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 74  gttcgccaagaagcggtatgccgagaagg 102
           |||||| ||||||||||||||||||||||
Sbjct: 147 gttcgcgaagaagcggtatgccgagaagg 175
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>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181829

 Score = 46.1 bits (23), Expect = 0.035
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 39    gatgcccgcaagctgctcggtgc 61
             |||||||||||||||||||||||
Sbjct: 82738 gatgcccgcaagctgctcggtgc 82760
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>ref|XM_503781.1| Yarrowia lipolytica CLIB122, YALI0E10461g predicted mRNA
          Length = 789

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 69  aagaggttcgccaagaagcggtatgccgagaagg 102
           |||| ||||||||||||||| || ||||||||||
Sbjct: 142 aagatgttcgccaagaagcgatacgccgagaagg 175
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 69      aagaggttcgccaagaagcggtatgccgagaagg 102
               |||| ||||||||||||||| || ||||||||||
Sbjct: 1297107 aagatgttcgccaagaagcgatacgccgagaagg 1297140
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 98      gaaggcgcagatgaagaagaccttg 122
               |||| ||||||||||||||||||||
Sbjct: 8866230 gaagccgcagatgaagaagaccttg 8866254
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>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 98    gaaggcgcagatgaagaagaccttg 122
             |||| ||||||||||||||||||||
Sbjct: 71248 gaagccgcagatgaagaagaccttg 71272
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>dbj|AK112629.1| Ciona intestinalis cDNA, clone:cieg019d08, full insert sequence
          Length = 2357

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 gatgaagaagaccttgaagat 127
           |||||||||||||||||||||
Sbjct: 955 gatgaagaagaccttgaagat 975
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>ref|XM_520999.1| PREDICTED: Pan troglodytes similar to Lamina-associated
          polypeptide 2, isoforms beta/gamma (Thymopoietin,
          isoforms beta/gamma) (TP beta/gamma)
          (Thymopoietin-related peptide isoforms beta/gamma)
          (TPRP isoforms beta/gamma) (LOC465562), mRNA
          Length = 540

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 21 gtcaagaagaactccaagga 40
          ||||||||||||||||||||
Sbjct: 84 gtcaagaagaactccaagga 65
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>ref|XM_509288.1| PREDICTED: Pan troglodytes thymopoietin (LOC452151), mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   gtcaagaagaactccaagga 40
            ||||||||||||||||||||
Sbjct: 2547 gtcaagaagaactccaagga 2566
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>ref|XM_428989.1| PREDICTED: Gallus gallus similar to Dimethylaniline monooxygenase
            [N-oxide forming] 5 (Hepatic flavin-containing
            monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5)
            (LOC431437), partial mRNA
          Length = 2310

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  tgaagaagaccttgaagatg 128
            ||||||||||||||||||||
Sbjct: 2260 tgaagaagaccttgaagatg 2241
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>gb|AE009067.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 93 of
            256 of the complete sequence
          Length = 10719

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 93   gccgagaaggcgcagatgaagaag 116
            |||||| |||||||||||||||||
Sbjct: 1871 gccgagcaggcgcagatgaagaag 1848
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>ref|NM_001032283.1| Homo sapiens thymopoietin (TMPO), transcript variant 2, mRNA
          Length = 2701

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   gtcaagaagaactccaagga 40
            ||||||||||||||||||||
Sbjct: 996  gtcaagaagaactccaagga 1015
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>gb|BC053675.1| Homo sapiens thymopoietin, transcript variant 2, mRNA (cDNA clone
            MGC:61508 IMAGE:6170639), complete cds
          Length = 2881

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   gtcaagaagaactccaagga 40
            ||||||||||||||||||||
Sbjct: 1000 gtcaagaagaactccaagga 1019
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>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence
          Length = 205900

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   agaagaccttgaagatgcac 131
             ||||||||||||||||||||
Sbjct: 73177 agaagaccttgaagatgcac 73196
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 93      gccgagaaggcgcagatgaagaag 116
               |||||| |||||||||||||||||
Sbjct: 1020232 gccgagcaggcgcagatgaagaag 1020209
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>gb|AC013418.32| Homo sapiens 12 BAC RP11-181C3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 122292

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    gtcaagaagaactccaagga 40
             ||||||||||||||||||||
Sbjct: 11071 gtcaagaagaactccaagga 11052
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>dbj|AK110102.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H09, full
            insert sequence
          Length = 2934

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  agatgaagaagaccttgaag 125
            ||||||||||||||||||||
Sbjct: 2164 agatgaagaagaccttgaag 2183
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>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete
             sequence
          Length = 179661

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aggaggcgcgctccgtcaag 26
             ||||||||||||||||||||
Sbjct: 21361 aggaggcgcgctccgtcaag 21342
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>gb|U09087.1|HSU09087 Human thymopoietin beta mRNA, complete cds
          Length = 2701

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   gtcaagaagaactccaagga 40
            ||||||||||||||||||||
Sbjct: 996  gtcaagaagaactccaagga 1015
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>gb|BC108623.1| Xenopus laevis cDNA clone MGC:131227 IMAGE:7390734, complete cds
          Length = 2184

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  gatgcccgcaagctgctcg 57
           |||||||||||||||||||
Sbjct: 329 gatgcccgcaagctgctcg 347
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>gb|AF157953.1| Marmota monax isolate Swc1 cytochrome b (cytb) gene, complete cds;
           mitochondrial
          Length = 1140

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  aagaagaactccaaggatg 42
           |||||||||||||||||||
Sbjct: 702 aagaagaactccaaggatg 684
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>gb|AY505491.1| Marmota monax cytochrome b (cytb) gene, partial cds; mitochondrial
          Length = 660

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  aagaagaactccaaggatg 42
           |||||||||||||||||||
Sbjct: 492 aagaagaactccaaggatg 474
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>ref|XM_388647.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08471.1)
           partial mRNA
          Length = 1176

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 107 gatgaagaagaccttgaag 125
           |||||||||||||||||||
Sbjct: 122 gatgaagaagaccttgaag 104
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>ref|XM_645613.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (203.t00011)
           partial mRNA
          Length = 972

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 tgaagaagaccttgaagat 127
           |||||||||||||||||||
Sbjct: 585 tgaagaagaccttgaagat 603
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>gb|AF100719.1| Marmota monax cytochrome b (cyt b) gene, complete cds;
           mitochondrial gene for mitochondrial product
          Length = 1140

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  aagaagaactccaaggatg 42
           |||||||||||||||||||
Sbjct: 702 aagaagaactccaaggatg 684
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>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to
             4010779
          Length = 201139

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    atgcccgcaagctgctcgg 58
             |||||||||||||||||||
Sbjct: 20759 atgcccgcaagctgctcgg 20741
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>emb|Z49884.1|BSNARYWI B.subtilis nar[G,H,I,J,K], ywi[C,D,E] and argS genes
          Length = 12450

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 40   atgcccgcaagctgctcgg 58
            |||||||||||||||||||
Sbjct: 2624 atgcccgcaagctgctcgg 2642
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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     caaggatgcccgcaagctg 53
              |||||||||||||||||||
Sbjct: 347067 caaggatgcccgcaagctg 347049
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>gb|AF064684.1| Ateles paniscus chamek cardiac beta-myosin heavy chain (MYH7)
          gene, partial cds
          Length = 143

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 2  gcagaaggaggcgcgctcc 20
          |||||||||||||||||||
Sbjct: 74 gcagaaggaggcgcgctcc 92
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>emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in linkage group 2,
           complete sequence
          Length = 233488

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 106 agatgaagaagaccttgaagatg 128
           ||||||||||||| |||||||||
Sbjct: 762 agatgaagaagacattgaagatg 784
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>emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 in linkage group 17,
             complete sequence
          Length = 153573

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 152   gaaggttgatgatgacgtt 170
             |||||||||||||||||||
Sbjct: 58830 gaaggttgatgatgacgtt 58812
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>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19,
             complete sequence
          Length = 230267

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 152   gaaggttgatgatgacgtt 170
             |||||||||||||||||||
Sbjct: 12325 gaaggttgatgatgacgtt 12343
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>gb|AF143934.1|AF143934 Marmota monax clone ASU_16756 cytochrome b (cyt-b) gene, complete
           cds; mitochondrial gene for mitochondrial product
          Length = 1140

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  aagaagaactccaaggatg 42
           |||||||||||||||||||
Sbjct: 702 aagaagaactccaaggatg 684
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>gb|AC107627.3| Homo sapiens chromosome 1 clone RP1-281L18, complete sequence
          Length = 90509

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   tgaagaagaccttgaagat 127
             |||||||||||||||||||
Sbjct: 10058 tgaagaagaccttgaagat 10076
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 19      ccgtcaagaagaactccaa 37
               |||||||||||||||||||
Sbjct: 1919008 ccgtcaagaagaactccaa 1919026
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>ref|NM_174727.1| Bos taurus myosin, heavy polypeptide 7, cardiac muscle, beta (MYH7),
            mRNA
          Length = 5930

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    gcagaaggaggcgcgctcc 20
            |||||||||||||||||||
Sbjct: 4418 gcagaaggaggcgcgctcc 4436
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>ref|XM_392325.2| PREDICTED: Apis mellifera similar to ENSANGP00000010668
           (LOC408794), mRNA
          Length = 2504

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 149 gcagaaggttgatgatgac 167
           |||||||||||||||||||
Sbjct: 383 gcagaaggttgatgatgac 365
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>gb|AF229810.1|AF229810 Felis catus slow myosin heavy chain (MyHCS) mRNA, partial cds
          Length = 1524

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 2  gcagaaggaggcgcgctcc 20
          |||||||||||||||||||
Sbjct: 9  gcagaaggaggcgcgctcc 27
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>gb|AY303349.1| Enterobacteria phage RB69, complete genome
          Length = 167560

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   tgaagaagaccttgaagat 127
             |||||||||||||||||||
Sbjct: 61506 tgaagaagaccttgaagat 61488
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>dbj|AB059400.1| Bos taurus MyHC-slow mRNA for myosin heavy chain slow, complete cds
          Length = 5930

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    gcagaaggaggcgcgctcc 20
            |||||||||||||||||||
Sbjct: 4418 gcagaaggaggcgcgctcc 4436
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>ref|XM_320593.2| Anopheles gambiae str. PEST ENSANGP00000015219
           (ENSANGG00000012730), partial mRNA
          Length = 1647

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  gatgcccgcaagctgctcg 57
           |||||||||||||||||||
Sbjct: 337 gatgcccgcaagctgctcg 355
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>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence
          Length = 52591

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 63    aagggcaagaggttcgccaagaagcgg 89
             |||||||||| ||| ||||||||||||
Sbjct: 25042 aagggcaagatgtttgccaagaagcgg 25016
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 39      gatgcccgcaagctgctcg 57
               |||||||||||||||||||
Sbjct: 1152520 gatgcccgcaagctgctcg 1152538
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>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4,
             complete sequence
          Length = 205347

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 106   agatgaagaagaccttgaagatg 128
             |||||||||||| ||||||||||
Sbjct: 75267 agatgaagaagaacttgaagatg 75289
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>dbj|AP000721.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-91L24, complete
             sequence
          Length = 124636

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   agatgaagaagaccttgaa 124
             |||||||||||||||||||
Sbjct: 77166 agatgaagaagaccttgaa 77148
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>emb|AJ830933.1| Bacteriophage TuIa vs.4 gene for gpvs.4 and vs.3 gene for gpvs.3
          Length = 496

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 tgaagaagaccttgaagat 127
           |||||||||||||||||||
Sbjct: 358 tgaagaagaccttgaagat 376
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>emb|AJ830932.1| Bacteriophage RB69 vs.4 gene for gpvs.4 and vs.3 gene for gpvs.3
          Length = 496

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 109 tgaagaagaccttgaagat 127
           |||||||||||||||||||
Sbjct: 358 tgaagaagaccttgaagat 376
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>dbj|AB088367.1| Equus caballus MyHC-slow mRNA for myosin heavy chain slow, complete
            cds
          Length = 5984

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    gcagaaggaggcgcgctcc 20
            |||||||||||||||||||
Sbjct: 4470 gcagaaggaggcgcgctcc 4488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,236,016
Number of Sequences: 3902068
Number of extensions: 1236016
Number of successful extensions: 89176
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88831
Number of HSP's gapped (non-prelim): 345
length of query: 174
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 152
effective length of database: 17,147,199,772
effective search space: 2606374365344
effective search space used: 2606374365344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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