ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZIP6_ARATH (O64738) Zinc transporter 6, chloroplast precursor (Z... 83 7e-16
2ZIP1_ARATH (O81123) Zinc transporter 1 precursor (ZRT/IRT-like p... 67 3e-11
3IRT3_ARATH (Q8LE59) Fe(II) transport protein 3, chloroplast prec... 65 1e-10
4ZIP4_ARATH (O04089) Zinc transporter 4, chloroplast precursor (Z... 65 2e-10
5ZIP12_ARATH (Q9FIS2) Probable zinc transporter 12 precursor (ZRT... 64 4e-10
6ZIP9_ARATH (O82643) Zinc transporter 9 (ZRT/IRT-like protein 9) 63 6e-10
7ZIP8_ARATH (Q8S3W4) Probable zinc transporter 8 precursor (ZRT/I... 62 1e-09
8IRT1_ARATH (Q38856) Fe(II) transport protein 1 precursor (Iron-r... 62 1e-09
9ZIP7_ARATH (Q8W246) Probable zinc transporter 7 precursor (ZRT/I... 61 2e-09
10IRT2_ARATH (O81850) Fe(II) transport protein 2 precursor (Iron-r... 59 9e-09
11ZIP3_ARATH (Q9SLG3) Zinc transporter 3 precursor (ZRT/IRT-like p... 55 2e-07
12ZIP5_ARATH (O23039) Zinc transporter 5 precursor (ZRT/IRT-like p... 55 2e-07
13ZIP10_ARATH (Q8W245) Probable zinc transporter 10 precursor (ZRT... 54 4e-07
14ZRT2_YEAST (Q12436) Zinc-regulated transporter 2 (Low-affinity z... 41 0.003
15ZRT1_YEAST (P32804) Zinc-regulated transporter 1 (High-affinity ... 40 0.007

>ZIP6_ARATH (O64738) Zinc transporter 6, chloroplast precursor (ZRT/IRT-like|
           protein 6)
          Length = 341

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           KQ++VS+VLEIGI+FHSVIIGVT+GMSQ+ C IRPL+ ALS HQ+FEG+G
Sbjct: 177 KQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLG 226



 Score = 37.0 bits (84), Expect = 0.046
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +2

Query: 2   YAALADCAVASRRPWRDFPF 61
           + +LADC V+SR PW+DFPF
Sbjct: 86  FESLADCQVSSRHPWKDFPF 105



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>ZIP1_ARATH (O81123) Zinc transporter 1 precursor (ZRT/IRT-like protein 1)|
          Length = 355

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           ++++VS+VLEIGIV HSVIIG++LG SQ +  I+PL+ ALS HQ FEG+G
Sbjct: 196 RRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLG 245



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>IRT3_ARATH (Q8LE59) Fe(II) transport protein 3, chloroplast precursor|
           (Iron-regulated transporter 3)
          Length = 389

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 30/45 (66%), Positives = 38/45 (84%)
 Frame = +2

Query: 476 MVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEG 610
           +VS+VLE+GIV HS+IIG++LG+SQ  C IRPL+ ALS HQ FEG
Sbjct: 235 VVSQVLELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEG 279



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>ZIP4_ARATH (O04089) Zinc transporter 4, chloroplast precursor (ZRT/IRT-like|
           protein 4)
          Length = 374

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +2

Query: 476 MVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEG 610
           +VS++LE+GIV HS+IIG++LG+SQ  C IRPL+ ALS HQ FEG
Sbjct: 220 VVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEG 264



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>ZIP12_ARATH (Q9FIS2) Probable zinc transporter 12 precursor (ZRT/IRT-like|
           protein 12)
          Length = 355

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 27/50 (54%), Positives = 41/50 (82%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           ++K+V+++LE+GIV HSVIIG++LG S  V  I+PL+ A++ HQ+FEG G
Sbjct: 198 RKKIVTQILELGIVVHSVIIGISLGASPSVSTIKPLIAAITFHQLFEGFG 247



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>ZIP9_ARATH (O82643) Zinc transporter 9 (ZRT/IRT-like protein 9)|
          Length = 344

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 33/72 (45%), Positives = 43/72 (59%)
 Frame = +2

Query: 395 VGCHGAGHXXXXXXXXXXXXXXXKKQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPL 574
           V  HG GH                +  +VS++LE+GIV HS+IIG++LG+S   C IRPL
Sbjct: 166 VSGHGHGHSHGHGDVGLDSGV---RHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPL 222

Query: 575 VXALSXHQVFEG 610
           + ALS HQ FEG
Sbjct: 223 LLALSFHQFFEG 234



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>ZIP8_ARATH (Q8S3W4) Probable zinc transporter 8 precursor (ZRT/IRT-like|
           protein 8)
          Length = 347

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 25/50 (50%), Positives = 39/50 (78%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + ++++ VLE+GI+ HSV+IG++LG + D C I+ L+ AL  HQ+FEGMG
Sbjct: 190 RYRVIATVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMG 239



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>IRT1_ARATH (Q38856) Fe(II) transport protein 1 precursor (Iron-regulated|
           transporter 1)
          Length = 339

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 25/50 (50%), Positives = 39/50 (78%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + ++++ VLE+GI+ HSV+IG++LG + D C I+ L+ AL  HQ+FEGMG
Sbjct: 182 RYRVIAMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMG 231



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>ZIP7_ARATH (Q8W246) Probable zinc transporter 7 precursor (ZRT/IRT-like|
           protein 7)
          Length = 365

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 24/50 (48%), Positives = 39/50 (78%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + K+++++LE+GIV HSV+IG+ +G S + C ++ L+ AL  HQ+FEGMG
Sbjct: 208 RNKVIAQILELGIVVHSVVIGLAMGASDNKCTVQSLIAALCFHQLFEGMG 257



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>IRT2_ARATH (O81850) Fe(II) transport protein 2 precursor (Iron-regulated|
           transporter 2)
          Length = 350

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 24/50 (48%), Positives = 39/50 (78%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + ++++ VLE+GI+FHSV+IG++LG + D C I+ L+ AL  H +FEG+G
Sbjct: 193 RYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIG 242



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>ZIP3_ARATH (Q9SLG3) Zinc transporter 3 precursor (ZRT/IRT-like protein 3)|
          Length = 339

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 24/50 (48%), Positives = 37/50 (74%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + +++++VLE+GI+ HSV+IG++LG SQ   A + L  AL  HQ FEG+G
Sbjct: 182 RTRVIAQVLELGIIVHSVVIGISLGASQSPDAAKALFIALMFHQCFEGLG 231



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>ZIP5_ARATH (O23039) Zinc transporter 5 precursor (ZRT/IRT-like protein 5)|
          Length = 360

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 24/50 (48%), Positives = 36/50 (72%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + ++V++VLE+GI+ HSV+IG++LG SQ     + L  AL  HQ FEG+G
Sbjct: 203 RTRVVAQVLEVGIIVHSVVIGISLGASQSPDTAKALFAALMFHQCFEGLG 252



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>ZIP10_ARATH (Q8W245) Probable zinc transporter 10 precursor (ZRT/IRT-like|
           protein 10)
          Length = 364

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 23/50 (46%), Positives = 38/50 (76%)
 Frame = +2

Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           + ++++ VLE+GIV  S++IG+++G + + C I+ LV AL  HQ+FEGMG
Sbjct: 207 RYRILAIVLELGIVVQSIVIGLSVGDTNNTCTIKGLVAALCFHQMFEGMG 256



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>ZRT2_YEAST (Q12436) Zinc-regulated transporter 2 (Low-affinity zinc transport|
           protein ZRT2)
          Length = 422

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = +2

Query: 488 VLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           +LE GI+FHSV +G++L ++ +      L   L+ HQ+FEG+G
Sbjct: 268 ILEFGIIFHSVFVGLSLSVAGE--EFETLFIVLTFHQMFEGLG 308



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>ZRT1_YEAST (P32804) Zinc-regulated transporter 1 (High-affinity zinc transport|
           protein ZRT1)
          Length = 376

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = +2

Query: 488 VLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616
           +LE G++FHSV+IG+ LG   D      L   L  HQ FEG+G
Sbjct: 224 ILEFGVIFHSVMIGLNLGSVGD--EFSSLYPVLVFHQSFEGLG 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,257,524
Number of Sequences: 219361
Number of extensions: 698132
Number of successful extensions: 1824
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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