| Clone Name | bags33h05 |
|---|---|
| Clone Library Name | barley_pub |
>ZIP6_ARATH (O64738) Zinc transporter 6, chloroplast precursor (ZRT/IRT-like| protein 6) Length = 341 Score = 82.8 bits (203), Expect = 7e-16 Identities = 37/50 (74%), Positives = 46/50 (92%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 KQ++VS+VLEIGI+FHSVIIGVT+GMSQ+ C IRPL+ ALS HQ+FEG+G Sbjct: 177 KQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLG 226 Score = 37.0 bits (84), Expect = 0.046 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +2 Query: 2 YAALADCAVASRRPWRDFPF 61 + +LADC V+SR PW+DFPF Sbjct: 86 FESLADCQVSSRHPWKDFPF 105
>ZIP1_ARATH (O81123) Zinc transporter 1 precursor (ZRT/IRT-like protein 1)| Length = 355 Score = 67.4 bits (163), Expect = 3e-11 Identities = 31/50 (62%), Positives = 42/50 (84%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 ++++VS+VLEIGIV HSVIIG++LG SQ + I+PL+ ALS HQ FEG+G Sbjct: 196 RRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLG 245
>IRT3_ARATH (Q8LE59) Fe(II) transport protein 3, chloroplast precursor| (Iron-regulated transporter 3) Length = 389 Score = 65.5 bits (158), Expect = 1e-10 Identities = 30/45 (66%), Positives = 38/45 (84%) Frame = +2 Query: 476 MVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEG 610 +VS+VLE+GIV HS+IIG++LG+SQ C IRPL+ ALS HQ FEG Sbjct: 235 VVSQVLELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEG 279
>ZIP4_ARATH (O04089) Zinc transporter 4, chloroplast precursor (ZRT/IRT-like| protein 4) Length = 374 Score = 65.1 bits (157), Expect = 2e-10 Identities = 29/45 (64%), Positives = 38/45 (84%) Frame = +2 Query: 476 MVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEG 610 +VS++LE+GIV HS+IIG++LG+SQ C IRPL+ ALS HQ FEG Sbjct: 220 VVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEG 264
>ZIP12_ARATH (Q9FIS2) Probable zinc transporter 12 precursor (ZRT/IRT-like| protein 12) Length = 355 Score = 63.9 bits (154), Expect = 4e-10 Identities = 27/50 (54%), Positives = 41/50 (82%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 ++K+V+++LE+GIV HSVIIG++LG S V I+PL+ A++ HQ+FEG G Sbjct: 198 RKKIVTQILELGIVVHSVIIGISLGASPSVSTIKPLIAAITFHQLFEGFG 247
>ZIP9_ARATH (O82643) Zinc transporter 9 (ZRT/IRT-like protein 9)| Length = 344 Score = 63.2 bits (152), Expect = 6e-10 Identities = 33/72 (45%), Positives = 43/72 (59%) Frame = +2 Query: 395 VGCHGAGHXXXXXXXXXXXXXXXKKQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPL 574 V HG GH + +VS++LE+GIV HS+IIG++LG+S C IRPL Sbjct: 166 VSGHGHGHSHGHGDVGLDSGV---RHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPL 222 Query: 575 VXALSXHQVFEG 610 + ALS HQ FEG Sbjct: 223 LLALSFHQFFEG 234
>ZIP8_ARATH (Q8S3W4) Probable zinc transporter 8 precursor (ZRT/IRT-like| protein 8) Length = 347 Score = 62.0 bits (149), Expect = 1e-09 Identities = 25/50 (50%), Positives = 39/50 (78%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + ++++ VLE+GI+ HSV+IG++LG + D C I+ L+ AL HQ+FEGMG Sbjct: 190 RYRVIATVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMG 239
>IRT1_ARATH (Q38856) Fe(II) transport protein 1 precursor (Iron-regulated| transporter 1) Length = 339 Score = 62.0 bits (149), Expect = 1e-09 Identities = 25/50 (50%), Positives = 39/50 (78%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + ++++ VLE+GI+ HSV+IG++LG + D C I+ L+ AL HQ+FEGMG Sbjct: 182 RYRVIAMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMG 231
>ZIP7_ARATH (Q8W246) Probable zinc transporter 7 precursor (ZRT/IRT-like| protein 7) Length = 365 Score = 61.2 bits (147), Expect = 2e-09 Identities = 24/50 (48%), Positives = 39/50 (78%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + K+++++LE+GIV HSV+IG+ +G S + C ++ L+ AL HQ+FEGMG Sbjct: 208 RNKVIAQILELGIVVHSVVIGLAMGASDNKCTVQSLIAALCFHQLFEGMG 257
>IRT2_ARATH (O81850) Fe(II) transport protein 2 precursor (Iron-regulated| transporter 2) Length = 350 Score = 59.3 bits (142), Expect = 9e-09 Identities = 24/50 (48%), Positives = 39/50 (78%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + ++++ VLE+GI+FHSV+IG++LG + D C I+ L+ AL H +FEG+G Sbjct: 193 RYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIG 242
>ZIP3_ARATH (Q9SLG3) Zinc transporter 3 precursor (ZRT/IRT-like protein 3)| Length = 339 Score = 55.1 bits (131), Expect = 2e-07 Identities = 24/50 (48%), Positives = 37/50 (74%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + +++++VLE+GI+ HSV+IG++LG SQ A + L AL HQ FEG+G Sbjct: 182 RTRVIAQVLELGIIVHSVVIGISLGASQSPDAAKALFIALMFHQCFEGLG 231
>ZIP5_ARATH (O23039) Zinc transporter 5 precursor (ZRT/IRT-like protein 5)| Length = 360 Score = 54.7 bits (130), Expect = 2e-07 Identities = 24/50 (48%), Positives = 36/50 (72%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + ++V++VLE+GI+ HSV+IG++LG SQ + L AL HQ FEG+G Sbjct: 203 RTRVVAQVLEVGIIVHSVVIGISLGASQSPDTAKALFAALMFHQCFEGLG 252
>ZIP10_ARATH (Q8W245) Probable zinc transporter 10 precursor (ZRT/IRT-like| protein 10) Length = 364 Score = 53.9 bits (128), Expect = 4e-07 Identities = 23/50 (46%), Positives = 38/50 (76%) Frame = +2 Query: 467 KQKMVSKVLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 + ++++ VLE+GIV S++IG+++G + + C I+ LV AL HQ+FEGMG Sbjct: 207 RYRILAIVLELGIVVQSIVIGLSVGDTNNTCTIKGLVAALCFHQMFEGMG 256
>ZRT2_YEAST (Q12436) Zinc-regulated transporter 2 (Low-affinity zinc transport| protein ZRT2) Length = 422 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/43 (41%), Positives = 29/43 (67%) Frame = +2 Query: 488 VLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 +LE GI+FHSV +G++L ++ + L L+ HQ+FEG+G Sbjct: 268 ILEFGIIFHSVFVGLSLSVAGE--EFETLFIVLTFHQMFEGLG 308
>ZRT1_YEAST (P32804) Zinc-regulated transporter 1 (High-affinity zinc transport| protein ZRT1) Length = 376 Score = 39.7 bits (91), Expect = 0.007 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = +2 Query: 488 VLEIGIVFHSVIIGVTLGMSQDVCAIRPLVXALSXHQVFEGMG 616 +LE G++FHSV+IG+ LG D L L HQ FEG+G Sbjct: 224 ILEFGVIFHSVMIGLNLGSVGD--EFSSLYPVLVFHQSFEGLG 264 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,257,524 Number of Sequences: 219361 Number of extensions: 698132 Number of successful extensions: 1824 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1752 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1816 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)