ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags33h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473145.1| Oryza sativa (japonica cultivar-group), predic... 66 1e-07
2emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 66 1e-07
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
4dbj|AK073609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
5dbj|AK067002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
6gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosom... 44 0.46
7gb|BT019090.1| Zea mays clone Contig688.F mRNA sequence 44 0.46
8gb|AC126453.5| Mus musculus BAC clone RP23-244A6 from chromosome... 44 0.46
9emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on ch... 44 0.46
10gb|DQ178241.1| Caenorhabditis elegans argonaute-like (alg-1) mRN... 42 1.8
11gb|AC157096.9| Mus musculus 6 BAC RP24-369J3 (Roswell Park Cance... 42 1.8
12emb|Z69661.1|CEF48F7 Caenorhabditis elegans Cosmid F48F7, comple... 42 1.8
13gb|AC124120.5| Mus musculus chromosome 1, clone RP24-64M13, comp... 42 1.8
14gb|AC161432.5| Mus musculus chromosome 1, clone RP23-453N14, com... 42 1.8
15ref|NM_077921.3| Caenorhabditis elegans Argonaute (plant)-Like G... 42 1.8
16tpg|BK000023.1| TPA: TPA_exp: Mus musculus nuclear pore complex-... 42 1.8
17emb|AJ298076.2|MMU298076 Mus musculus partial Tpr gene for nucle... 42 1.8
18gb|AC152955.2| Mus musculus 6 BAC RP23-377G14 (Roswell Park Canc... 42 1.8
19gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, co... 40 7.3
20gb|AC102196.7| Mus musculus chromosome 3, clone RP24-445M20, com... 40 7.3
21gb|DQ165320.1| Limulus polyphemus putative glycogen synthase mRN... 40 7.3
22gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete... 40 7.3
23gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, comp... 40 7.3
24gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, compl... 40 7.3
25ref|XM_803452.1| Trypanosoma cruzi strain CL Brener protein kina... 40 7.3
26gb|AC122500.5| Mus musculus BAC clone RP24-409J4 from chromosome... 40 7.3
27gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cance... 40 7.3
28emb|BX547991.4| Human DNA sequence from clone CTD-2173J9 on chro... 40 7.3
29emb|AL731733.9| Human DNA sequence from clone RP11-508M1 on chro... 40 7.3
30emb|AL391137.11| Human DNA sequence from clone RP11-144G6 on chr... 40 7.3
31emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chr... 40 7.3
32emb|AL356056.22| Human DNA sequence from clone RP11-38L15 on chr... 40 7.3
33emb|AL353784.15| Human DNA sequence from clone RP11-314P6 on chr... 40 7.3
34emb|AL122000.11|HSJ572F19 Human DNA sequence from clone RP4-572F... 40 7.3
35emb|AL121925.10|HSJ966J20 Human DNA sequence from clone RP5-966J... 40 7.3
36emb|AL731621.3|OSJN00268 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
37emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 i... 40 7.3
38emb|CR600510.1| full-length cDNA clone CS0DC017YC24 of Neuroblas... 40 7.3
39gb|AC018642.7| Homo sapiens chromosome 7 clone RP11-329I5, compl... 40 7.3
40gb|AC007538.5| Homo sapiens Xq28 PAC RPCI6-224C24 (Roswell Park ... 40 7.3
41gb|AC092671.2| Homo sapiens BAC clone RP11-598I5 from 4, complet... 40 7.3
42dbj|AK142525.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 40 7.3
43gb|AC109517.4| Homo sapiens BAC clone RP11-40L7 from 4, complete... 40 7.3
44gb|AC146071.3| Pan troglodytes BAC clone RP43-64L21 from chromos... 40 7.3
45gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, compl... 40 7.3
46gb|AC009783.9|AC009783 Homo sapiens chromosome 7 clone RP11-14M1... 40 7.3
47gb|AC067863.19| Homo sapiens chromosome 15, clone RP11-335K5, co... 40 7.3
48emb|BX276118.7| Mouse DNA sequence from clone RP23-452O23 on chr... 40 7.3
49gb|AC154742.2| Mus musculus BAC clone RP24-392F16 from 13, compl... 40 7.3
50emb|AL359239.4|CNS05TEQ Human chromosome 14 DNA sequence BAC R-4... 40 7.3
51gb|AY609513.1| Sus scrofa clone Clu_146373.scr.msk.p1.Contig1, m... 40 7.3
52emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on ch... 40 7.3
53dbj|AP001965.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 7.3
54dbj|AP001870.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 7.3 
>ref|XM_473145.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2193

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 170 agaaagttggtgcgaaatggttgtatttctccctctagcatagtcaaaagaag 222
           |||||| ||||||| |||||||||||||||||||| | ||||| |||||||||
Sbjct: 709 agaaagctggtgcggaatggttgtatttctccctccaacatagccaaaagaag 761
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 170   agaaagttggtgcgaaatggttgtatttctccctctagcatagtcaaaagaag 222
             |||||| ||||||| |||||||||||||||||||| | ||||| |||||||||
Sbjct: 37121 agaaagctggtgcggaatggttgtatttctccctccaacatagccaaaagaag 37069
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                     
Query: 170      agaaagttggtgcgaaatggttgtatttctccctctagcatagtcaaaagaag 222
                |||||| ||||||| |||||||||||||||||||| | ||||| |||||||||
Sbjct: 25550924 agaaagctggtgcggaatggttgtatttctccctccaacatagccaaaagaag 25550872



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 128      tcaagtacaccatgcgatgt 147
                ||||||||||||||||||||
Sbjct: 13437565 tcaagtacaccatgcgatgt 13437546
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>dbj|AK073609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048J15, full
            insert sequence
          Length = 2753

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                 
Query: 170  agaaagttggtgcgaaatggttgtatttctccctctagcatagtcaaaagaag 222
            |||||| ||||||| |||||||||||||||||||| | ||||| |||||||||
Sbjct: 1010 agaaagctggtgcggaatggttgtatttctccctccaacatagccaaaagaag 1062
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>dbj|AK067002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091B14, full
            insert sequence
          Length = 3674

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                 
Query: 170  agaaagttggtgcgaaatggttgtatttctccctctagcatagtcaaaagaag 222
            |||||| ||||||| |||||||||||||||||||| | ||||| |||||||||
Sbjct: 1945 agaaagctggtgcggaatggttgtatttctccctccaacatagccaaaagaag 1997
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>gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosome 6, complete sequence
          Length = 190146

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 319    tcttactgataagtcaccaaca 340
              ||||||||||||||||||||||
Sbjct: 183140 tcttactgataagtcaccaaca 183119
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>gb|BT019090.1| Zea mays clone Contig688.F mRNA sequence
          Length = 1070

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 463 caacaagggcaaagaaatcatc 484
           ||||||||||||||||||||||
Sbjct: 583 caacaagggcaaagaaatcatc 562
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>gb|AC126453.5| Mus musculus BAC clone RP23-244A6 from chromosome 6, complete sequence
          Length = 172616

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 319   tcttactgataagtcaccaaca 340
             ||||||||||||||||||||||
Sbjct: 79770 tcttactgataagtcaccaaca 79749
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>emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on chromosome X, complete
              sequence
          Length = 167407

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 44     gtagtaggttctgatgtttttt 65
              ||||||||||||||||||||||
Sbjct: 152746 gtagtaggttctgatgtttttt 152767
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>gb|DQ178241.1| Caenorhabditis elegans argonaute-like (alg-1) mRNA, exons, and
           partial cds
          Length = 4583

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 141 gcgatgttcctcaaagacaag 161
           |||||||||||||||||||||
Sbjct: 276 gcgatgttcctcaaagacaag 296
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>gb|AC157096.9| Mus musculus 6 BAC RP24-369J3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 175080

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 221    agagtaattgctgatgaaaag 241
              |||||||||||||||||||||
Sbjct: 162306 agagtaattgctgatgaaaag 162286
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>emb|Z69661.1|CEF48F7 Caenorhabditis elegans Cosmid F48F7, complete sequence
          Length = 29820

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 141 gcgatgttcctcaaagacaag 161
           |||||||||||||||||||||
Sbjct: 152 gcgatgttcctcaaagacaag 172
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>gb|AC124120.5| Mus musculus chromosome 1, clone RP24-64M13, complete sequence
          Length = 242227

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 333    caccaacaataacaaagaatg 353
              |||||||||||||||||||||
Sbjct: 224009 caccaacaataacaaagaatg 224029
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>gb|AC161432.5| Mus musculus chromosome 1, clone RP23-453N14, complete sequence
          Length = 199303

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 333    caccaacaataacaaagaatg 353
              |||||||||||||||||||||
Sbjct: 131144 caccaacaataacaaagaatg 131164
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>ref|NM_077921.3| Caenorhabditis elegans Argonaute (plant)-Like Gene family member
           (alg-1) (alg-1) mRNA, complete cds
          Length = 3406

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 141 gcgatgttcctcaaagacaag 161
           |||||||||||||||||||||
Sbjct: 259 gcgatgttcctcaaagacaag 279
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>tpg|BK000023.1| TPA: TPA_exp: Mus musculus nuclear pore complex-associated intranuclear
             coiled-coil protein TPR (Tpr) gene, complete cds
          Length = 59413

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   caccaacaataacaaagaatg 353
             |||||||||||||||||||||
Sbjct: 10411 caccaacaataacaaagaatg 10391
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>emb|AJ298076.2|MMU298076 Mus musculus partial Tpr gene for nuclear pore complex-associated
             protein Tpr and partial FLJ20505 gene
          Length = 32260

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   caccaacaataacaaagaatg 353
             |||||||||||||||||||||
Sbjct: 10411 caccaacaataacaaagaatg 10391
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>gb|AC152955.2| Mus musculus 6 BAC RP23-377G14 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 157224

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  agagtaattgctgatgaaaag 241
            |||||||||||||||||||||
Sbjct: 2389 agagtaattgctgatgaaaag 2369
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>gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, complete sequence
          Length = 212827

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   tctagcatagtcaaaagaagagta 226
             ||||||||||||||||| ||||||
Sbjct: 19035 tctagcatagtcaaaaggagagta 19012
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>gb|AC102196.7| Mus musculus chromosome 3, clone RP24-445M20, complete sequence
          Length = 166532

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   tctagcatagtcaaaagaagagta 226
             ||||||||||||||||| ||||||
Sbjct: 46544 tctagcatagtcaaaaggagagta 46567
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>gb|DQ165320.1| Limulus polyphemus putative glycogen synthase mRNA, partial cds
          Length = 975

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 aatcatccatcatgttgtgggaac 501
           ||||||| ||||||||||||||||
Sbjct: 808 aatcatcaatcatgttgtgggaac 785
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>gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete sequence
          Length = 132557

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   gatgttcctcaaagacaagg 162
             ||||||||||||||||||||
Sbjct: 26147 gatgttcctcaaagacaagg 26128
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>gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, complete sequence
          Length = 186750

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tgtgctctacaaatggagta 268
             ||||||||||||||||||||
Sbjct: 88842 tgtgctctacaaatggagta 88823
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>gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, complete sequence
          Length = 191336

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   gatgttcctcaaagacaagg 162
             ||||||||||||||||||||
Sbjct: 63635 gatgttcctcaaagacaagg 63616
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>ref|XM_803452.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053506869.60) partial mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  tctcagggaggaaagaaggg 95
           ||||||||||||||||||||
Sbjct: 376 tctcagggaggaaagaaggg 395
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>gb|AC122500.5| Mus musculus BAC clone RP24-409J4 from chromosome 8, complete sequence
          Length = 175361

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   gatgaaaaggaggaaatgtg 252
             ||||||||||||||||||||
Sbjct: 34705 gatgaaaaggaggaaatgtg 34724
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>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 222    gagtaattgctgatgaaaaggagg 245
              |||||| |||||||||||||||||
Sbjct: 150721 gagtaactgctgatgaaaaggagg 150744
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>emb|BX547991.4| Human DNA sequence from clone CTD-2173J9 on chromosome 10 Contains
             glutamate dehydrogenase pseudogene 8 (GLUDP6), a dual
             specificity phosphatase 8 (DUSP8) pseudogene, a cathepsin
             L-like 2 pseudogene and a novel pseudogene, complete
             sequence
          Length = 72387

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   aactgttctgaaggtttaaa 462
             ||||||||||||||||||||
Sbjct: 16163 aactgttctgaaggtttaaa 16144
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>emb|AL731733.9| Human DNA sequence from clone RP11-508M1 on chromosome 10 Contains a
              centaurin gamma-like family member 9 pseudogene (CTGLF9P),
              a BMS1L pseudogene 5 (BMS1LP5), a dual specificity
              phosphatase 8 (DUSP8) pseudogene, a glutamate dehydrogenase
              pseudogene 2 (GLUDP2), a cathepsin L-like 3 pseudogene
              (CTCLL3), three novel genes and three CpG islands, complete
              sequence
          Length = 211345

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    aactgttctgaaggtttaaa 462
              ||||||||||||||||||||
Sbjct: 132260 aactgttctgaaggtttaaa 132279
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>emb|AL391137.11| Human DNA sequence from clone RP11-144G6 on chromosome 10 Contains a
              KIAA0187 pseudogene, the gene for a novel protein similar
              to ARF GTPase-activating protein (MRIP2), the ANXA8L1 gene
              for annexin A8-like 1, a novel gene, the glutamate
              dehydrogenase pseudogene 8 (GLUDP8), a pseudogene similar
              to part of cathepsin L (CTSL), a novel gene, the gene for a
              novel protein, a dual specificity phosphatase 8 (DUSP8)
              pseudogene, the 5' end of a novel gene and two CpG islands,
              complete sequence
          Length = 178169

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    aactgttctgaaggtttaaa 462
              ||||||||||||||||||||
Sbjct: 167170 aactgttctgaaggtttaaa 167189
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>emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chromosome 10 Contains the
             cathepsin L-like 1 (CTSLL1) pseudogene, a novel gene, a
             pseudogene similar to part of ring finger protein 3
             (RNF3), the 5' end of the MINPP1 gene for multiple
             inositol polyphosphate histidine phosphatase 1 and a CpG
             island, complete sequence
          Length = 173390

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   aactgttctgaaggtttaaa 462
             ||||||||||||||||||||
Sbjct: 46289 aactgttctgaaggtttaaa 46308
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>emb|AL356056.22| Human DNA sequence from clone RP11-38L15 on chromosome 10 Contains a
             gene for a protein similar to FLJ12916, two novel genes,
             the gene for synaptotagmin (CHR10SYT), a Ras homolog
             enriched in brain 2 (RHEB2) pseudogene, the 5' end of a
             novel gene (LOC142964) and two CpG islands, complete
             sequence
          Length = 183976

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   aactgttctgaaggtttaaa 462
             ||||||||||||||||||||
Sbjct: 14179 aactgttctgaaggtttaaa 14198
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>emb|AL353784.15| Human DNA sequence from clone RP11-314P6 on chromosome 10 Contains part
             of the PCDH15 gene for protocadherin 15 and the 5' end of
             a novel gene, complete sequence
          Length = 169780

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   aactgttctgaaggtttaaa 462
             ||||||||||||||||||||
Sbjct: 22432 aactgttctgaaggtttaaa 22451
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>emb|AL122000.11|HSJ572F19 Human DNA sequence from clone RP4-572F19 on chromosome 1p22.3-31.3
             Contains STSs and GSSs, complete sequence
          Length = 120444

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aaaattagcacctctaatgg 33
             ||||||||||||||||||||
Sbjct: 18071 aaaattagcacctctaatgg 18090
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>emb|AL121925.10|HSJ966J20 Human DNA sequence from clone RP5-966J20 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 39260

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 467   aagggcaaagaaatcatccatcat 490
             ||||| ||||||||||||||||||
Sbjct: 25912 aaggggaaagaaatcatccatcat 25935
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>emb|AL731621.3|OSJN00268 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013O03,
             complete sequence
          Length = 118791

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tcaagtacaccatgcgatgt 147
             ||||||||||||||||||||
Sbjct: 73921 tcaagtacaccatgcgatgt 73902
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>emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 in linkage group 6,
             complete sequence
          Length = 163380

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 454   aggtttaaacaacaagggcaaaga 477
             |||||||||| |||||||||||||
Sbjct: 31759 aggtttaaactacaagggcaaaga 31736
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>emb|CR600510.1| full-length cDNA clone CS0DC017YC24 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 2129

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 383 gcatcagcaagagctggggg 402
           ||||||||||||||||||||
Sbjct: 865 gcatcagcaagagctggggg 846
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>gb|AC018642.7| Homo sapiens chromosome 7 clone RP11-329I5, complete sequence
          Length = 194523

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tgtgctctacaaatggagta 268
             ||||||||||||||||||||
Sbjct: 54718 tgtgctctacaaatggagta 54737
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>gb|AC007538.5| Homo sapiens Xq28 PAC RPCI6-224C24 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tgatgaaaaggaggaaatgt 251
             ||||||||||||||||||||
Sbjct: 17906 tgatgaaaaggaggaaatgt 17887
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>gb|AC092671.2| Homo sapiens BAC clone RP11-598I5 from 4, complete sequence
          Length = 164229

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    aaacagagcaaaattagcac 24
            ||||||||||||||||||||
Sbjct: 4395 aaacagagcaaaattagcac 4376
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>dbj|AK142525.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630011J19 product:unclassifiable, full
            insert sequence
          Length = 3402

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 222  gagtaattgctgatgaaaaggagg 245
            |||||| |||||||||||||||||
Sbjct: 2741 gagtaactgctgatgaaaaggagg 2764
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>gb|AC109517.4| Homo sapiens BAC clone RP11-40L7 from 4, complete sequence
          Length = 43575

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   gatgaaaaggaggaaatgtg 252
             ||||||||||||||||||||
Sbjct: 40364 gatgaaaaggaggaaatgtg 40345
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>gb|AC146071.3| Pan troglodytes BAC clone RP43-64L21 from chromosome 7, complete
             sequence
          Length = 207055

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   gatgttcctcaaagacaagg 162
             ||||||||||||||||||||
Sbjct: 98326 gatgttcctcaaagacaagg 98307
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>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence
          Length = 169122

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    ataattgatcttactgataa 330
              ||||||||||||||||||||
Sbjct: 109548 ataattgatcttactgataa 109567
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>gb|AC009783.9|AC009783 Homo sapiens chromosome 7 clone RP11-14M12, complete sequence
          Length = 169326

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   tgtgctctacaaatggagta 268
             ||||||||||||||||||||
Sbjct: 56455 tgtgctctacaaatggagta 56436
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>gb|AC067863.19| Homo sapiens chromosome 15, clone RP11-335K5, complete sequence
          Length = 111700

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   gcatcagcaagagctggggg 402
             ||||||||||||||||||||
Sbjct: 60831 gcatcagcaagagctggggg 60812
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>emb|BX276118.7| Mouse DNA sequence from clone RP23-452O23 on chromosome X, complete
             sequence
          Length = 119329

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   caaagaaatcatccatcatg 491
             ||||||||||||||||||||
Sbjct: 97939 caaagaaatcatccatcatg 97958
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>gb|AC154742.2| Mus musculus BAC clone RP24-392F16 from 13, complete sequence
          Length = 129749

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tagtaggttctgatgttttt 64
             ||||||||||||||||||||
Sbjct: 53705 tagtaggttctgatgttttt 53686
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>emb|AL359239.4|CNS05TEQ Human chromosome 14 DNA sequence BAC R-432I6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169985

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     cagggaggaaagaagggaag 98
              ||||||||||||||||||||
Sbjct: 108253 cagggaggaaagaagggaag 108234
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>gb|AY609513.1| Sus scrofa clone Clu_146373.scr.msk.p1.Contig1, mRNA sequence
          Length = 1371

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 atgttcctcaaagacaaggg 163
           ||||||||||||||||||||
Sbjct: 660 atgttcctcaaagacaaggg 679
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>emb|AL929572.10| Mouse DNA sequence from clone RP23-464H12 on chromosome 2, complete
            sequence
          Length = 191603

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 472  caaagaaatcatccatcatg 491
            ||||||||||||||||||||
Sbjct: 7790 caaagaaatcatccatcatg 7771
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>dbj|AP001965.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2291N16, complete
             sequence
          Length = 89421

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aaacagagcaaaattagcac 24
             ||||||||||||||||||||
Sbjct: 21890 aaacagagcaaaattagcac 21871
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>dbj|AP001870.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2206F6, complete
             sequence
          Length = 114285

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaacagagcaaaattagcac 24
             ||||||||||||||||||||
Sbjct: 33839 aaacagagcaaaattagcac 33858


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,805,244
Number of Sequences: 3902068
Number of extensions: 5805244
Number of successful extensions: 134897
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134708
Number of HSP's gapped (non-prelim): 189
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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