>DNJ10_ARATH (Q8GYX8) Chaperone protein dnaJ 10 (AtJ10) (AtDjC10)|
          Length = 398

 Score =  173 bits (438), Expect = 3e-43
 Identities = 89/178 (50%), Positives = 122/178 (68%)
 Frame = +1

Query: 13  EKLARFLNKFLSQYVSGDTEGFAHRAESEAKRLSSTSYALDIRRTIGYVYSRQAAKELGK 192
           +KLA+ L   L++YV    E F   AE+E  RLS+ +Y +D+  TIGY+Y RQAAKELGK
Sbjct: 138 DKLAQILKDRLNEYVINKDE-FISNAEAEVARLSNAAYGVDMLNTIGYIYVRQAAKELGK 196

Query: 193 KAMYLGVPFLTEWVRNKGHLWRSQITAAKGAXXXXXXXEEACRQSAKDGGAATEKDVDMQ 372
           KA+YLGVPF+ EW RNKGH  +SQ+TAA GA       EE  RQ   +G   TE++++  
Sbjct: 197 KAIYLGVPFIAEWFRNKGHFIKSQLTAATGAYALFQLQEEMKRQLNTEGN-YTEEELEEY 255

Query: 373 MRMNKDLMMSSIWKLNVVDIEVTLLHVCEMVLHENNVKKEDLKARAMALRNLGKIFQR 546
           ++ +K +M+ S+WKLNV DIE TL  VC++VL +   K+E+L+ RA  L+ LG+IFQR
Sbjct: 256 LQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARGLKALGRIFQR 313

>YIS4_YEAST (P40564) Hypothetical 48.6 kDa protein in BET1-PAN1 intergenic|
           region
          Length = 432

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
 Frame = +1

Query: 46  SQYVSGDTEGFAHRAESEAKRLSSTSYALDIRRTIGYVYSRQAAKELGKKAMYLGVPFLT 225
           S Y     + F  + E EA  L   S+ LDI  TIG VY  +A   L  + ++ G+  + 
Sbjct: 226 SVYDDACKDSFKKKFEEEANLLKMESFGLDILHTIGDVYYEKAEIFLASQNLF-GMGGIF 284

Query: 226 EWVRNKGHLWRSQITAAKGAXXXXXXXEEACRQSA----------KDGG---AATEKDVD 366
             ++ KG ++   +     A       +E  +             KDG      T +++ 
Sbjct: 285 HSMKAKGGVFMDTLRTVSAAIDAQNTMKELEKMKEASTNNEPLFDKDGNEQIKPTTEELA 344

Query: 367 MQMRMNKDLMMSSIWKLNVVDIEVTLLHVCEMVLHENNVKKEDLKARAMALRNLGKIFQR 546
            Q ++    ++S+ W  +  +I  TL  VC+ VL +++V K+ L  RA A++ LG++F++
Sbjct: 345 QQEQLLMGKVLSAAWHGSKYEITSTLRGVCKKVLEDDSVSKKTLIRRAEAMKLLGEVFKK 404

>CAJ1_YEAST (P39101) Protein CAJ1|
          Length = 391

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
 Frame = +1

Query: 7   EXEKLARFLNKFLSQYV----SGDTEGFAHRAESEAKRLSSTSYALDIRRTIGYVYSRQA 174
           + ++LA  LN+ +S+Y+    S + E F  + + E + L   S+ L++   +  VY  +A
Sbjct: 179 QVDELAEKLNEKISRYLIAVKSNNLEEFTRKLDQEIEDLKLESFGLELLYLLARVYKTKA 238

Query: 175 AKELGKKAMYLGVPFLTEWVRNKGHLWRSQITAAKGAXXXXXXXEEACRQSAKDGGAATE 354
              +  K  Y G+  +    R+          + K A        EA +   K     T+
Sbjct: 239 NNFIMSKKTY-GISKIFTGTRDNAR-------SVKSAYNLLSTGLEAQKAMEKMSEVNTD 290

Query: 355 KDVDMQMRMNKDLMMSS-----IWKLNVVDIEVTLLHVCEMVLHENNVKKEDLKARAMAL 519
            ++D   R   +  M+      +W ++  ++E  L  VC  +L++  V  ++  A+A A+
Sbjct: 291 -ELDQYERAKFESTMAGKALGVMWAMSKFELERKLKDVCNKILNDKKVPSKERIAKAKAM 349

>ATIN_BHV1P (P30020) Alpha trans-inducing protein (Alpha-TIF)|
          Length = 504

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = -2

Query: 256 SRGGPCSSPTRSGMEL------PGTWPSCQAPWRLVGSKR 155
           +RGGP  SP RSG+ L      PG  P+C  P R  G +R
Sbjct: 439 ARGGPGPSPVRSGLGLSRARGSPGPGPACGGPSRARGGRR 478

>SYK_THEVO (Q979B8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 503

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = +1

Query: 4   NEXEKLARFLNKFLSQYVSGDTEGFAHRAESEAKRLSSTSYALDIRRTIGYVYSRQAAKE 183
           N  ++  R+LNK+    + GD++     +  E ++L   SY +D R  I  +   Q  ++
Sbjct: 313 NLFDEFERYLNKYREGDIDGDSKAIIEYSLIEKEKL---SYPIDFRHLITLIQIYQKKED 369

Query: 184 LGKKAM 201
           + + AM
Sbjct: 370 ILRAAM 375

>YOT7_CAEEL (P34653) Hypothetical protein ZK632.7|
          Length = 632

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/73 (21%), Positives = 34/73 (46%)
 Frame = +1

Query: 7   EXEKLARFLNKFLSQYVSGDTEGFAHRAESEAKRLSSTSYALDIRRTIGYVYSRQAAKEL 186
           + E L  F N  ++   +G   G+      + K+    +Y++D+R  IG++++    K +
Sbjct: 428 QNEDLNMFGNLIVA-LATGRANGWRKDLYQQLKKFIEDTYSMDLRNVIGFLHNNSTRKTI 486

Query: 187 GKKAMYLGVPFLT 225
            +    +G  F T
Sbjct: 487 NEIMPMIGGRFFT 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,893,381
Number of Sequences: 219361
Number of extensions: 1388134
Number of successful extensions: 4020
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4018
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)