ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags33f06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 545 bits (275), Expect = e-152 Identities = 383/419 (91%) Strand = Plus / Plus Query: 238 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 297 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 222 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 281 Query: 298 gatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttgga 357 |||||||| || | ||||||||| ||| |||||| |||||||| || || ||||||||| Sbjct: 282 gatggctcggctatcaagaagcttcagactggagtaaacaagcttgctgaccttgttgga 341 Query: 358 gttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaag 417 |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 342 gttacactgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcccctagg 401 Query: 418 attgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaat 477 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 402 attgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcctgttgaaaat 461 Query: 478 attggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatgga 537 |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 462 attggagctaagttggttaggcaagcagcagcaaagaccaatgatttagctggagatggc 521 Query: 538 acaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgca 597 |||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 522 acaactacttctgttgtgcttgctcaggggctgattgctgagggtgttaaggtcgttgca 581 Query: 598 gctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcactagt 656 ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 582 gctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcactagt 640 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 107 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 166 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 82 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 141 Query: 167 ctggccttgtatcagacaagaagccat 193 | || ||||||||||||||||||||| Sbjct: 142 ccggaattgtatcagacaagaagccat 168
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 545 bits (275), Expect = e-152 Identities = 383/419 (91%) Strand = Plus / Plus Query: 238 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 297 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 222 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 281 Query: 298 gatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttgga 357 |||||||| || | ||||||||| ||| |||||| |||||||| || || ||||||||| Sbjct: 282 gatggctcggctatcaagaagcttcagactggagtaaacaagcttgctgaccttgttgga 341 Query: 358 gttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaag 417 |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 342 gttacactgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcccctagg 401 Query: 418 attgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaat 477 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 402 attgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcctgttgaaaat 461 Query: 478 attggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatgga 537 |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 462 attggagctaagttggttaggcaagcagcagcaaagaccaatgatttagctggagatggc 521 Query: 538 acaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgca 597 |||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 522 acaactacttctgttgtgcttgctcaggggctgattgctgagggtgttaaggtcgttgca 581 Query: 598 gctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcactagt 656 ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 582 gctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcactagt 640 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 107 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 166 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 82 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 141 Query: 167 ctggccttgtatcagacaagaagccat 193 | || ||||||||||||||||||||| Sbjct: 142 ccggaattgtatcagacaagaagccat 168
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 492 bits (248), Expect = e-136 Identities = 380/424 (89%) Strand = Plus / Plus Query: 233 atgtgcgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttca 292 |||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||| Sbjct: 357 atgtgcgccttcagaggagggctaacttcagagtaaaagcggctaaggagctgtacttca 416 Query: 293 acaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttg 352 |||||||||| ||||| | ||||||||||||| ||||||||| ||||| ||||| || | Sbjct: 417 acaaggatgggtcagctatcaagaagctccagactggagtcaataagcttgcagacctag 476 Query: 353 ttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctccc 412 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 477 ttggagttacactcggaccaaagggaaggaatgtcgttttggagagcaagtacggctctc 536 Query: 413 ctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttg 472 | |||||||| || ||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 537 ccaagattgttaacgatggcgttacagttgcaagagaggttgagctggaggaccctgtgg 596 Query: 473 aaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggag 532 |||| ||||||||||| ||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 597 aaaacattggagctaaattggtcaggcaagctgcagctaagaccaacgatcttgctggag 656 Query: 533 atggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggtta 592 |||| ||||| || ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 657 atgggacaaccacctctgtggtccttgctcaggggctgattgctgagggtgttaaggttg 716 Query: 593 ttgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcac 652 | ||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 717 tggcagctggtgctaatcctgttcagattactcgtggtatcgagaaaacagcgaaagcac 776 Query: 653 tagt 656 |||| Sbjct: 777 tagt 780
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 472 bits (238), Expect = e-130 Identities = 250/254 (98%) Strand = Plus / Plus Query: 416 agattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaa 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 agattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaa 64 Query: 476 atattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatg 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 65 atattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagacg 124 Query: 536 gaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattg 595 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ggacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattg 184 Query: 596 cagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcactag 655 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 185 cagctggtgctaaccctgttcaaattactcgtggtattgagaaaacagcgaaagctctag 244 Query: 656 tccttgaacttaag 669 |||||||||||||| Sbjct: 245 tccttgaacttaag 258
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 460 bits (232), Expect = e-126 Identities = 289/308 (93%) Strand = Plus / Plus Query: 349 cttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggc 408 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 1 cttgttggagttacactgggaccaaagggaaggaatgttgttttggagagcaagtatggg 60 Query: 409 tcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcct 468 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 tcccctaggattgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcct 120 Query: 469 gttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagct 528 ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 121 gttgaaaatattggagctaagttggttaggcaagcagcagcaaagaccaatgatttagct 180 Query: 529 ggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaag 588 |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 181 ggagatggcacaactacttctgttgtgcttgctcaggggctgattgctgagggtgttaag 240 Query: 589 gttattgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaa 648 || |||||||||||||||| ||||| |||||||| |||||||| |||||||| |||||| Sbjct: 241 gtcgttgcagctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaa 300 Query: 649 gcactagt 656 |||||||| Sbjct: 301 gcactagt 308
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 236 bits (119), Expect = 8e-59 Identities = 338/411 (82%) Strand = Plus / Plus Query: 243 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 302 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 221 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 280 Query: 303 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 362 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 281 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 340 Query: 363 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 422 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 341 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 400 Query: 423 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 482 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 401 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 460 Query: 483 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 542 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 461 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 520 Query: 543 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 602 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 521 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 580 Query: 603 tgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcact 653 ||| || || || || ||||| |||||||| |||||||| || |||||||| Sbjct: 581 tgctaatccagtacagattacccgtggtatagagaaaacggccaaagcact 631
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 236 bits (119), Expect = 8e-59 Identities = 338/411 (82%) Strand = Plus / Plus Query: 243 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 302 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 241 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 300 Query: 303 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 362 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 301 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 360 Query: 363 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 422 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 361 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 420 Query: 423 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 482 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 421 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 480 Query: 483 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 542 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 481 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 540 Query: 543 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 602 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 541 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 600 Query: 603 tgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcact 653 ||| || || || || ||||| |||||||| |||||||| || |||||||| Sbjct: 601 tgctaatccagtacagattacccgtggtatagagaaaacggccaaagcact 651
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 236 bits (119), Expect = 8e-59 Identities = 338/411 (82%) Strand = Plus / Plus Query: 243 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 302 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 220 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 279 Query: 303 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 362 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 280 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 339 Query: 363 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 422 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 340 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 399 Query: 423 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 482 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 400 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 459 Query: 483 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 542 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 460 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 519 Query: 543 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 602 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 520 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 579 Query: 603 tgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcact 653 ||| || || || || ||||| |||||||| |||||||| || |||||||| Sbjct: 580 tgctaatccagtacagattacccgtggtatagagaaaacggccaaagcact 630
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 228 bits (115), Expect = 2e-56 Identities = 328/399 (82%) Strand = Plus / Plus Query: 243 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 302 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 241 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 300 Query: 303 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 362 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 301 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 360 Query: 363 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 422 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 361 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 420 Query: 423 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 482 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 421 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 480 Query: 483 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 542 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 481 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 540 Query: 543 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 602 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 541 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 600 Query: 603 tgccaaccctgttcaaattactcgtggtattgagaaaac 641 ||| || || || || ||||| |||||||| |||||||| Sbjct: 601 tgctaatccagtacagattacccgtggtatagagaaaac 639
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 218 bits (110), Expect = 2e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 449 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 508 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 813584 aggttgaactggaggatcctgttgaaaatattggagctaagttggttaggcaagcagcag 813525 Query: 509 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 568 | |||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 813524 caaagaccaatgatttagctggagatggcacaactacttctgttgtgcttgctcaggggc 813465 Query: 569 tcattgctgagggtgttaaggt 590 | |||||||||||||||||||| Sbjct: 813464 tgattgctgagggtgttaaggt 813443 Score = 186 bits (94), Expect = 6e-44 Identities = 118/126 (93%) Strand = Plus / Minus Query: 327 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 386 |||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||| Sbjct: 814137 tggagtaaacaagcttgctgaccttgttggagttacactgggaccaaagggaaggaatgt 814078 Query: 387 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaag 446 |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 814077 tgttttggagagcaagtatgggtcccctaggattgtcaatgatggtgttacagttgcaag 814018 Query: 447 agaggt 452 |||||| Sbjct: 814017 agaggt 814012 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 238 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 297 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 814321 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 814262 Query: 298 gatggctcagccaccaagaagctccaggt 326 |||||||| || | ||||||||| ||||| Sbjct: 814261 gatggctcggctatcaagaagcttcaggt 814233 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 593 ttgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcac 652 |||||||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||| Sbjct: 813334 ttgcagctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcac 813275 Query: 653 tagt 656 |||| Sbjct: 813274 tagt 813271 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 107 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 166 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 814461 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 814402 Query: 167 ctggccttgtatcagacaagaagccat 193 | || ||||||||||||||||||||| Sbjct: 814401 ccggaattgtatcagacaagaagccat 814375
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 218 bits (110), Expect = 2e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 449 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 508 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 96718 aggttgaactggaggatcctgttgaaaatattggagctaagttggttaggcaagcagcag 96659 Query: 509 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 568 | |||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 96658 caaagaccaatgatttagctggagatggcacaactacttctgttgtgcttgctcaggggc 96599 Query: 569 tcattgctgagggtgttaaggt 590 | |||||||||||||||||||| Sbjct: 96598 tgattgctgagggtgttaaggt 96577 Score = 186 bits (94), Expect = 6e-44 Identities = 118/126 (93%) Strand = Plus / Minus Query: 327 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 386 |||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||| Sbjct: 97271 tggagtaaacaagcttgctgaccttgttggagttacactgggaccaaagggaaggaatgt 97212 Query: 387 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaag 446 |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 97211 tgttttggagagcaagtatgggtcccctaggattgtcaatgatggtgttacagttgcaag 97152 Query: 447 agaggt 452 |||||| Sbjct: 97151 agaggt 97146 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 238 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 297 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 97455 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 97396 Query: 298 gatggctcagccaccaagaagctccaggt 326 |||||||| || | ||||||||| ||||| Sbjct: 97395 gatggctcggctatcaagaagcttcaggt 97367 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 593 ttgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcac 652 |||||||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||| Sbjct: 96468 ttgcagctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcac 96409 Query: 653 tagt 656 |||| Sbjct: 96408 tagt 96405 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 107 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 166 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 97595 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 97536 Query: 167 ctggccttgtatcagacaagaagccat 193 | || ||||||||||||||||||||| Sbjct: 97535 ccggaattgtatcagacaagaagccat 97509
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 180 bits (91), Expect = 4e-42 Identities = 268/327 (81%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||| || || ||||| | ||||||||||| | ||||| || Sbjct: 302 gtcaacaagcttgcagatctcgtcggggttactcttggaccaaaggggcgaaatgtagtc 361 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | || |||||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct: 362 ctcgaaagcaagtatggctcacctaaaattgtcaatgatggtgtcactgtggcaaaggag 421 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 ||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| || Sbjct: 422 gttgaacttgaggaccctgttgaaaatattggtgctaaattggtccgccaagctgctgct 481 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || || || || || ||||| ||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 482 aaaacaaatgacttggctggtgatgggacaaccacttcggttgtccttgctcaagggatg 541 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgttcaaattactcgtggt 630 ||| |||||||||| |||||| | || |||||||| || || || || || || |||||| Sbjct: 542 attactgagggtgtaaaggttgtagctgctggtgctaatccagtgcagatcacccgtggt 601 Query: 631 attgagaaaacagcgaaagcactagtc 657 |||||||||||||| |||||||||||| Sbjct: 602 attgagaaaacagccaaagcactagtc 628
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 180 bits (91), Expect = 4e-42 Identities = 268/327 (81%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||| || || ||||| | ||||||||||| | ||||| || Sbjct: 429 gtcaacaagcttgcagatctcgtcggggttactcttggaccaaaggggcgaaatgtagtc 488 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | || |||||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct: 489 ctcgaaagcaagtatggctcacctaaaattgtcaatgatggtgtcactgtggcaaaggag 548 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 ||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| || Sbjct: 549 gttgaacttgaggaccctgttgaaaatattggtgctaaattggtccgccaagctgctgct 608 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || || || || || ||||| ||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 609 aaaacaaatgacttggctggtgatgggacaaccacttcggttgtccttgctcaagggatg 668 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgttcaaattactcgtggt 630 ||| |||||||||| |||||| | || |||||||| || || || || || || |||||| Sbjct: 669 attactgagggtgtaaaggttgtagctgctggtgctaatccagtgcagatcacccgtggt 728 Query: 631 attgagaaaacagcgaaagcactagtc 657 |||||||||||||| |||||||||||| Sbjct: 729 attgagaaaacagccaaagcactagtc 755
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 149 bits (75), Expect = 1e-32 Identities = 216/263 (82%) Strand = Plus / Plus Query: 379 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 438 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 390 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 449 Query: 439 gttgcaagagaggttgagctggaggatcctgttgaaaatattggagctaagttggttagg 498 || || |||||||||||||| |||||||| ||||| || ||||| |||||| | || || Sbjct: 450 gtcgctagagaggttgagcttgaggatccagttgagaacattggtgctaagctagtgaga 509 Query: 499 caagctgcagcgaagaccaacgatttagctggagatggaacaactacttctgtcgtcctt 558 |||||||| | ||||| || || |||||||| ||||||||||| |||||||| || ||| Sbjct: 510 caagctgcttccaagactaatgacttagctggtgatggaacaacgacttctgttgttctt 569 Query: 559 gctcaggggctcattgctgagggtgttaaggttattgcagctggtgccaaccctgttcaa 618 ||||| || || |||||||| ||||| ||||| | || |||||||| || |||||| Sbjct: 570 gctcaaggtcttattgctgaaggtgtaaaggtggtagctgctggtgcaaatcctgttttg 629 Query: 619 attactcgtggtattgagaaaac 641 ||||| | |||||||||||||| Sbjct: 630 attaccagaggtattgagaaaac 652
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 145 bits (73), Expect = 2e-31 Identities = 178/213 (83%) Strand = Plus / Plus Query: 379 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 438 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 353 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 412 Query: 439 gttgcaagagaggttgagctggaggatcctgttgaaaatattggagctaagttggttagg 498 || || |||||||||||||| |||||||| ||||| || ||||| |||||| | || || Sbjct: 413 gtcgctagagaggttgagcttgaggatccagttgagaacattggtgctaagctagtgaga 472 Query: 499 caagctgcagcgaagaccaacgatttagctggagatggaacaactacttctgtcgtcctt 558 |||||||| | ||||| || || |||||||| ||||||||||| |||||||| || ||| Sbjct: 473 caagctgcttccaagactaatgacttagctggtgatggaacaacgacttctgttgttctt 532 Query: 559 gctcaggggctcattgctgagggtgttaaggtt 591 ||||| || || |||||||| ||||| |||||| Sbjct: 533 gctcaaggtcttattgctgaaggtgtaaaggtt 565
>gb|U46137.1|STU46137 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 627 Score = 145 bits (73), Expect = 2e-31 Identities = 202/245 (82%) Strand = Plus / Plus Query: 370 ccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgat 429 ||||| ||||| ||||| ||| | |||||||| || || || || || ||||| |||||| Sbjct: 382 ccaaaaggaagaaatgtagttcttgagagcaaatatggatctccgaaaattgtaaatgat 441 Query: 430 ggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattggagctaag 489 |||||||| || || ||||||||||| || || || |||||||| |||||||| || | Sbjct: 442 ggtgttactgtggccagagaggttgaactagaagaccctgttgagaatattggcgcaagt 501 Query: 490 ttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaactacttct 549 ||||| || ||||||||| | ||||| || || || ||||| |||||||||||||| ||| Sbjct: 502 ttggtgagacaagctgcatcaaagacaaatgacttggctggggatggaacaactacatct 561 Query: 550 gtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctggtgccaac 609 || || | || ||||||||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 562 gttgttttggcacaggggctcataactgagggtgttaaggttgttgcagctggtgcaaac 621 Query: 610 cctgt 614 ||||| Sbjct: 622 cctgt 626
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 139 bits (70), Expect = 1e-29 Identities = 295/370 (79%) Strand = Plus / Plus Query: 287 acttcaacaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcag 346 |||||||||||||||| ||||| | ||||||||| ||| ||| || ||||| || || | Sbjct: 213 acttcaacaaggatgggtcagctatcaagaagctacagaatggtgtgaacaaacttgctg 272 Query: 347 atcttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacg 406 |||| ||||||||||| | || ||||| || ||||||||||| | ||||||||||| | Sbjct: 273 atctagttggagttactcttggcccaaaaggcaggaatgttgtccttgagagcaagtatg 332 Query: 407 gctcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatc 466 | | || || ||||| |||||||| ||||| || || ||||||||||| | ||||||| Sbjct: 333 gtgctccaaaaattgttaatgatggagttactgtggccagagaggttgaattagaggatc 392 Query: 467 ctgttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttag 526 | || ||||| ||||| || || | || || |||||||| || || ||||| || | | Sbjct: 393 cagtagaaaacattggtgcgaaactagtgagacaagctgctgccaaaaccaatgacctgg 452 Query: 527 ctggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgtta 586 |||| ||||| || || || |||||||| || |||||||| || |||||||| ||||||| Sbjct: 453 ctggggatgggactacaacatctgtcgtgctagctcagggcctaattgctgaaggtgtta 512 Query: 587 aggttattgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcga 646 |||| ||||||||||||| |||||||| | ||| || | || |||||||| ||||| | Sbjct: 513 aggtggttgcagctggtgcaaaccctgtcctaatcaccagaggaattgagaagacagcaa 572 Query: 647 aagcactagt 656 ||||| |||| Sbjct: 573 aagcattagt 582
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 137 bits (69), Expect = 5e-29 Identities = 255/317 (80%) Strand = Plus / Plus Query: 334 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 393 |||||||| || |||||||| || ||||| | || || || ||||||||||||||| | Sbjct: 329 aacaagcttgcggatcttgtcggggttacgcttggtcctaaaggaaggaatgttgttctt 388 Query: 394 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggtt 453 |||||||| || || || ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 389 gagagcaaatatggttcgcctaaaattgttaatgatggtgtcactgttgctaaagaggtt 448 Query: 454 gagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcgaag 513 ||| |||| || || ||||| || ||||| || |||||||| || || || || |||||| Sbjct: 449 gagttggaagacccggttgagaacattggtgccaagttggtgagacaggcagctgcgaag 508 Query: 514 accaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctcatt 573 || || || || || || |||||||| || || ||||| || || || ||||| || ||| Sbjct: 509 acaaatgacttggcaggtgatggaaccacaacctctgttgttctagcccagggccttatt 568 Query: 574 gctgagggtgttaaggttattgcagctggtgccaaccctgttcaaattactcgtggtatt 633 || || ||||| |||||| ||||||||||||| |||||||| | ||||| ||||| ||| Sbjct: 569 gcagaaggtgtaaaggttgttgcagctggtgcaaaccctgtgcttattacacgtggcatt 628 Query: 634 gagaaaacagcgaaagc 650 ||||| ||| ||||||| Sbjct: 629 gagaagacatcgaaagc 645
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 133 bits (67), Expect = 8e-28 Identities = 265/331 (80%) Strand = Plus / Plus Query: 287 acttcaacaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcag 346 ||||||| ||||||| || |||| ||||||||||| | || || |||||||| |||| Sbjct: 242 acttcaatcaggatggttctgccattaagaagctccaagcaggtgttaacaagcttgcag 301 Query: 347 atcttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacg 406 |||| || || || || | || ||||| ||||| ||||| ||| | |||||||| || | Sbjct: 302 atctagtaggtgtaactcttggtccaaaaggaagaaatgtagttcttgagagcaaatatg 361 Query: 407 gctcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatc 466 |||| || || ||||| |||||||||||||| || || ||||||||||| || || || | Sbjct: 362 gctctccgaaaattgtaaatgatggtgttactgtggccagagaggttgaactagaagacc 421 Query: 467 ctgttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttag 526 ||||||| |||||||| || | ||||| || |||||||| | ||||| || || || | Sbjct: 422 ctgttgagaatattggtgcaagtttggtgagacaagctgcttcaaagacgaatgacttgg 481 Query: 527 ctggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgtta 586 |||| |||||||||||||| || || || | || ||||||||||| | |||||||||| Sbjct: 482 ctggggatggaacaactacatccgttgttttggcacaggggctcataacggagggtgtta 541 Query: 587 aggttattgcagctggtgccaaccctgttca 617 ||||| ||||||||||||| |||||| |||| Sbjct: 542 aggttgttgcagctggtgcaaaccctattca 572
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 8e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 449 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 508 |||||||||||||||| |||||||||||||||||||| || || || |||||||||||| Sbjct: 160199 aggttgagctggaggaccctgttgaaaatattggagccaaattagtccggcaagctgcag 160258 Query: 509 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 568 | ||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 160259 ccaagacaaatgatttggctggtgatgggacaacgacttctgttgtccttgctcaaggga 160318 Query: 569 tcattgctgagggtgttaaggt 590 | || | |||||||||||||| Sbjct: 160319 tgatcacagagggtgttaaggt 160340 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 327 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 386 ||||||||| ||||| || ||||| |||||||| || | || ||||| ||| ||||||| Sbjct: 159894 tggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgt 159953 Query: 387 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaa 445 ||| | ||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 159954 tgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaa 160012
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 123 bits (62), Expect = 8e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 449 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 508 |||||||||||||||| |||||||||||||||||||| || || || |||||||||||| Sbjct: 109226 aggttgagctggaggaccctgttgaaaatattggagccaaattagtccggcaagctgcag 109285 Query: 509 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 568 | ||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 109286 ccaagacaaatgatttggctggtgatgggacaacgacttctgttgtccttgctcaaggga 109345 Query: 569 tcattgctgagggtgttaaggt 590 | || | |||||||||||||| Sbjct: 109346 tgatcacagagggtgttaaggt 109367 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 327 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 386 ||||||||| ||||| || ||||| |||||||| || | || ||||| ||| ||||||| Sbjct: 108921 tggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgt 108980 Query: 387 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaa 445 ||| | ||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 108981 tgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaa 109039
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 326 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 385 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 386 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 445 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 446 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 505 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 506 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 565 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 615 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 566 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 610
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 353 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 412 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 413 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 472 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 473 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 532 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 533 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 592 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 615 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 593 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 637
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 223 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 282 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 283 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 342 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 343 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 402 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 403 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 462 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 615 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 463 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 507
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 345 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 404 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 405 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 464 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 465 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 524 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 525 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 584 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 615 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 585 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 629
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 105 bits (53), Expect = 2e-19 Identities = 228/285 (80%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 310 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 369 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || ||||| ||||||||||| || ||||| |||||| Sbjct: 370 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcgagagag 429 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 430 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 489 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 490 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 549 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 615 || ||||||||||| ||||| | || ||||||| |||||||||| Sbjct: 550 atcgctgagggtgtcaaggtggtagctgctggtg-caaccctgtt 593
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 97.6 bits (49), Expect = 5e-17 Identities = 205/257 (79%) Strand = Plus / Plus Query: 334 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 393 |||||||| || || |||||||| || ||| | |||||||| || || ||||||||| | Sbjct: 214 aacaagctcgcggaccttgttggtgtcacacttggaccaaaagggagaaatgttgttctt 273 Query: 394 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggtt 453 ||||||||||| || ||||| | ||||| ||||||||||| || ||||| || ||||| Sbjct: 274 gagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagggaggtc 333 Query: 454 gagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcgaag 513 ||| ||||||| || ||||| || ||||| || ||| | || |||||||| || || ||| Sbjct: 334 gagttggaggacccggttgagaacattggtgcaaagcttgtaaggcaagcagctgcaaag 393 Query: 514 accaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctcatt 573 ||||| || || ||||| || || ||||| || ||||| || ||||| || || | ||| Sbjct: 394 accaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggttttatt 453 Query: 574 gctgagggtgttaaggt 590 ||||||||||| ||||| Sbjct: 454 gctgagggtgtcaaggt 470
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 87.7 bits (44), Expect = 4e-14 Identities = 224/284 (78%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| ||||| || ||||| || ||| | ||||| || || | || |||||| Sbjct: 286 gtcaacaagcttgcagacctagttggtgtgacacttggacctaaagggcgaaacgttgtt 345 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || | ||||||||||||||||| || |||||||| ||| Sbjct: 346 cttgagagcaagtatggatcaccaagaattgtcaatgatggtgtgactgttgcaagggag 405 Query: 451 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 510 ||||| |||| || |||||||| || ||||| || || | ||||||||||| || || Sbjct: 406 gttgaattggaagaccctgttgagaacattggtgccaaacttgttaggcaagcagctgcc 465 Query: 511 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 570 |||||||| ||| | || || ||||| || || || ||||| || ||||| || || | Sbjct: 466 aagaccaatgatctggccggtgatggtaccacaacatctgtggttcttgcacaaggtttt 525 Query: 571 attgctgagggtgttaaggttattgcagctggtgccaaccctgt 614 |||||||||||||| ||||| | || |||||||| |||||||| Sbjct: 526 attgctgagggtgtcaaggtggtggctgctggtgcaaaccctgt 569
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 331 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 390 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 52583 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 52642 Query: 391 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 450 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 52643 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 52702 Query: 451 gt 452 || Sbjct: 52703 gt 52704
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Plus Query: 469 gttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagct 528 ||||| || ||||| |||||| | || || |||||||| | ||||| || || |||||| Sbjct: 3 gttgagaacattggtgctaagctagtgagacaagctgcttccaagactaatgacttagct 62 Query: 529 ggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaag 588 || ||||||||||| |||||||| || |||||||| || || |||||||| ||||| ||| Sbjct: 63 ggtgatggaacaacgacttctgttgttcttgctcaaggtcttattgctgaaggtgtaaag 122 Query: 589 gtt 591 ||| Sbjct: 123 gtt 125
>dbj|AK108892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E06, full insert sequence Length = 2254 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 392 tggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagagg 451 ||||||||||||||||| ||| |||||||| || |||||||| ||| |||| || |||| Sbjct: 296 tggagagcaagtacggcagccccaagattgtgaacgatggtgtcacaattgccagggagg 355 Query: 452 ttgagctggagga 464 ||||||| ||||| Sbjct: 356 ttgagcttgagga 368
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 334 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 393 |||||||| || || |||||||| || ||| | |||||||| || || ||||||||| | Sbjct: 43910 aacaagctcgcggaccttgttggtgtcacacttggaccaaaagggagaaatgttgttctt 43969 Query: 394 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggt 452 ||||||||||| || ||||| | ||||| ||||||||||| || ||||| || ||||| Sbjct: 43970 gagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagggaggt 44028 Score = 46.1 bits (23), Expect = 0.15 Identities = 113/143 (79%) Strand = Plus / Plus Query: 449 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 508 |||| ||| ||||||| || ||||| || ||||| || ||| | || |||||||| || | Sbjct: 44109 aggtcgagttggaggacccggttgagaacattggtgcaaagcttgtaaggcaagcagctg 44168 Query: 509 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 568 | |||||||| || || ||||| || || ||||| || ||||| || ||||| || || Sbjct: 44169 caaagaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtt 44228 Query: 569 tcattgctgagggtgttaaggtt 591 | |||||||||||||| |||||| Sbjct: 44229 ttattgctgagggtgtcaaggtt 44251
>gb|BT018703.1| Zea mays clone EL01N0515D02.d mRNA sequence Length = 1562 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 233 atgtgcgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttca 292 ||||||||||||| ||||| ||||| ||||| ||||||||||| || | || || | Sbjct: 1097 atgtgcgccttcaaaggaaggtgaacttaagagtaaaagcagctaataagttatagttta 1156 Query: 293 acaaggatggctcagccaccaagaagctccaggt 326 |||||||||||||| | | ||||||||||||||| Sbjct: 1157 acaaggatggctcatctatcaagaagctccaggt 1190
>dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCD7 Length = 87685 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 379 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 438 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 87510 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 87569 Query: 439 gttgcaagagaggt 452 || || |||||||| Sbjct: 87570 gtcgctagagaggt 87583
>gb|AY616039.1| Prototheca wickerhamii plastid 60 kDa chaperonin beta subunit-like mRNA, partial sequence Length = 711 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 392 tggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagagg 451 |||||| ||||||||||||||| |||||||| || ||||| || || || || | |||| Sbjct: 292 tggagaccaagtacggctcccccaagattgtgaacgatggcgtgacggtggctcgcgagg 351 Query: 452 ttgagctggagga 464 | ||||||||||| Sbjct: 352 tggagctggagga 364
>gb|DQ074959.1| Lactobacillus reuteri lr0140 (lr0140) gene, partial cds Length = 873 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 365 tgggaccaaagggaaggaatgttgttttgga 395 |||| ||||||||| |||||||||||||||| Sbjct: 89 tgggtccaaagggacggaatgttgttttgga 119
>emb|Z49068.1|CEK01C8 Caenorhabditis elegans Cosmid K01C8, complete sequence Length = 24725 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agctggagatggaacaactact 546 |||||||||||||||||||||| Sbjct: 22853 agctggagatggaacaactact 22874
>emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 on chromosome 20 Contains an autophagy Apg3p/Aut1p-like (APG3) pseudogene, complete sequence Length = 84871 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 tctaccgttgggctcatggcag 160 |||||||||||||||||||||| Sbjct: 43287 tctaccgttgggctcatggcag 43266
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 agctggagatggaacaactact 546 |||||||||||||||||||||| Sbjct: 1742641 agctggagatggaacaactact 1742620
>dbj|AB220435.1| Macaca fascicularis mRNA, clone QccE-16790: similar to Homo sapiens kinesin family member 13B (KIF13B), mRNA, NM_015254.2 Length = 1706 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 297 ggatggctcagccaccaagaagctccaggt 326 ||||||||||||||||| |||| ||||||| Sbjct: 386 ggatggctcagccaccacgaagttccaggt 357
>ref|NM_063349.4| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-4) (cct-4) mRNA, complete cds Length = 1816 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agctggagatggaacaactact 546 |||||||||||||||||||||| Sbjct: 300 agctggagatggaacaactact 321
>gb|AF241788.1|AF241788 Homo sapiens NPD011 (NPD011) mRNA, complete cds Length = 1294 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ctgcaggaattcgcacgaggag 23 |||||||||||||||||||||| Sbjct: 911 ctgcaggaattcgcacgaggag 932
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 365 tgggaccaaagggaaggaatgttgtt 390 |||||||||||||||| ||||||||| Sbjct: 2553955 tgggaccaaagggaagaaatgttgtt 2553930
>gb|U25697.1|CEU25697 Caenorhabditis elegans CCT chaperonin subunit 4 (cct-4) mRNA, complete cds Length = 1623 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 agctggagatggaacaactact 546 |||||||||||||||||||||| Sbjct: 300 agctggagatggaacaactact 321
>gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7, complete sequence Length = 144928 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 aaggaaaacatggcttcacca 126 ||||||||||||||||||||| Sbjct: 134589 aaggaaaacatggcttcacca 134609
>gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P15, complete sequence Length = 130539 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 aaggaaaacatggcttcacca 126 ||||||||||||||||||||| Sbjct: 36467 aaggaaaacatggcttcacca 36487
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 aaggaaaacatggcttcacca 126 ||||||||||||||||||||| Sbjct: 1448189 aaggaaaacatggcttcacca 1448209
>gb|AC073055.8| Homo sapiens BAC clone RP11-111J8 from 7, complete sequence Length = 87783 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 aagggaaggaatgttgttttg 393 ||||||||||||||||||||| Sbjct: 71972 aagggaaggaatgttgttttg 71952
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 365 tgggaccaaagggaaggaatgttgt 389 |||||||||||||||| |||||||| Sbjct: 1187448 tgggaccaaagggaagaaatgttgt 1187472
>gb|AY029215.1| Lactococcus lactis subsp. cremoris chaperonin GroES and chaperonin GroEL genes, complete cds Length = 2187 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 424 aatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgga 483 ||||||||||||||| |||| | |||| |||| || || || | | |||||||||| ||| Sbjct: 652 aatgatggtgttacaattgccaaagagattgaacttgaagaccattttgaaaatatggga 711 Query: 484 gctaa 488 ||||| Sbjct: 712 gctaa 716
>gb|AC152455.1| Pan troglodytes BAC clone RP43-4I15 from chromosome 7, complete sequence Length = 136468 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 aagggaaggaatgttgttttg 393 ||||||||||||||||||||| Sbjct: 41130 aagggaaggaatgttgttttg 41150
>gb|AC131661.4| Mus musculus BAC clone RP23-251N10 from 1, complete sequence Length = 211188 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 attttcattgtcatctatctc 212 ||||||||||||||||||||| Sbjct: 75246 attttcattgtcatctatctc 75226
>gb|AF417583.1| Enterococcus avium ATCC 14025 GroES and GroEL genes, partial cds Length = 1881 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 357 agttacattgggaccaaagggaaggaatgttgtttt 392 ||||||||| |||||||| ||| | ||||||||||| Sbjct: 366 agttacattaggaccaaaaggacgcaatgttgtttt 401
>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence Length = 175836 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 caaagggaaggaatgttgttttgg 394 ||||||||||||| |||||||||| Sbjct: 142199 caaagggaaggaaggttgttttgg 142222
>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence Length = 157233 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 caaagggaaggaatgttgttttgg 394 ||||||||||||| |||||||||| Sbjct: 24872 caaagggaaggaaggttgttttgg 24895
>gb|AY535007.1| RNA interference vector psiCHECK(TM)-2, complete sequence Length = 6273 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 gctggtgccaaccctgttca 617 |||||||||||||||||||| Sbjct: 3389 gctggtgccaaccctgttca 3408
>gb|AC003083.2| Homo sapiens BAC clone CTB-60N22 from 7, complete sequence Length = 136823 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aggaaaacatggcttcacca 126 |||||||||||||||||||| Sbjct: 48952 aggaaaacatggcttcacca 48971
>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete sequence Length = 179396 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aggaaaacatggcttcacca 126 |||||||||||||||||||| Sbjct: 124236 aggaaaacatggcttcacca 124217
>gb|AY487822.1| Reporter vector pGL3(R2.2), complete sequence Length = 5021 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 gctggtgccaaccctgttca 617 |||||||||||||||||||| Sbjct: 945 gctggtgccaaccctgttca 964
>gb|AY487821.1| Reporter vector pGL3(R2.1), complete sequence Length = 4949 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 gctggtgccaaccctgttca 617 |||||||||||||||||||| Sbjct: 945 gctggtgccaaccctgttca 964
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cagacaagaagccattttca 198 |||||||||||||||||||| Sbjct: 176918 cagacaagaagccattttca 176899
>ref|XM_650458.1| Entamoeba histolytica HM-1:IMSS purine nucleoside phosphorylase (27.t00056) partial mRNA Length = 726 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 ctgttgaaaatattggagctaagt 490 |||||||||| ||||||||||||| Sbjct: 449 ctgttgaaaagattggagctaagt 472
>gb|AF067612.2| Caenorhabditis elegans cosmid F55A8, complete sequence Length = 69431 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 taaagcagctaaggagctct 286 |||||||||||||||||||| Sbjct: 66597 taaagcagctaaggagctct 66578
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete sequence Length = 186272 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 agccaccaagaagctccagg 325 |||||||||||||||||||| Sbjct: 108076 agccaccaagaagctccagg 108095
>emb|AL772411.1| Human DNA sequence from clone RP11-180N18 on chromosome 1 Contains the AHCYL1 S-adenosylhomocysteine hydrolase-like 1 and the 5' end of gene KIAA1761 (FLJ14743), complete sequence Length = 81378 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 633 tgagaaaacagcgaaagcac 652 |||||||||||||||||||| Sbjct: 14036 tgagaaaacagcgaaagcac 14017
>emb|AL389888.8| Human DNA sequence from clone RP11-389K14 on chromosome 9 Contains two olfactory receptor pseudogenes and the 3' end of a novel gene, complete sequence Length = 202874 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 aagcagctaaggagctctacttca 292 |||| ||||||||||||||||||| Sbjct: 86323 aagccgctaaggagctctacttca 86300
>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains the 3' end of the OPHN1 gene for oligophrenin 1, complete sequence Length = 190611 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aggaaaacatggcttcacca 126 |||||||||||||||||||| Sbjct: 89615 aggaaaacatggcttcacca 89634
>emb|AL121972.17|HSJ397H23 Human DNA sequence from clone RP3-397H23 on chromosome 6q12-14.1 Contains the 3' end of SLC17A5 gene for solute carrier family 17 (anion/sugar transporter), member 5, a ribosomal S27 protein pseudogene and a CpG island, complete sequence Length = 113202 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 ttcaaattactcgtggtatt 633 |||||||||||||||||||| Sbjct: 109094 ttcaaattactcgtggtatt 109113
>emb|AL031281.6|HS224A6 Human DNA sequence from clone RP1-224A6 on chromosome 1p35.1-36.23 Contains the 3' UTR of the ELA3A gene for elastase 3A (pancreatic (protease E)), three novel genes, the CDC42 gene for cell division cycle 42 (GTP binding protein, 25kDa), the 3' end of the WNT4 gene for wingless-type MMTV integration site family (member 4) and a CpG island, complete sequence Length = 129366 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tgttgttttggagagcaagt 403 |||||||||||||||||||| Sbjct: 30261 tgttgttttggagagcaagt 30242
>emb|X56034.1|MIHVP63 H.virescens mitochondrial p63 gene for an isoform of chaperonin Length = 1825 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctggagatggaacaactac 545 |||||||||||||||||||| Sbjct: 334 gctggagatggaacaactac 353
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 580 ggtgttaaggttattgcagctggtgccaaccc 611 ||||||||| || |||||||||||| |||||| Sbjct: 206605 ggtgttaagcttgttgcagctggtggcaaccc 206574
>emb|AJ621720.1| Lactobacillus cypricasei partial hsp60 gene for GroEL, strain CCUG42961T Length = 717 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cagctggtgccaaccctgtt 615 |||||||||||||||||||| Sbjct: 188 cagctggtgccaaccctgtt 207
>emb|AJ621719.1| Lactobacillus acidipiscis partial hsp60 gene for GroEL, strain CIP106750T Length = 715 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cagctggtgccaaccctgtt 615 |||||||||||||||||||| Sbjct: 191 cagctggtgccaaccctgtt 210
>emb|AJ439087.1|BAP439087 Buchnera aphidicola (Chaetophorus leucomelas) groEL gene Length = 1656 Score = 40.1 bits (20), Expect = 9.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 357 agttacattgggaccaaagggaaggaatgttgtttt 392 |||||| || |||||||| ||||| ||||||||||| Sbjct: 84 agttactttaggaccaaaaggaagaaatgttgtttt 119
>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence Length = 217939 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agccaccaagaagctccagg 325 |||||||||||||||||||| Sbjct: 31977 agccaccaagaagctccagg 31958
>gb|AF359578.1| Rana catesbeiana RC-RNase7 precursor, mRNA, complete cds Length = 499 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ttgtcaatgatggtgttacagttg 442 ||||| |||||||||||||||||| Sbjct: 173 ttgtccatgatggtgttacagttg 150
>gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187657 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aggaaaacatggcttcacca 126 |||||||||||||||||||| Sbjct: 148291 aggaaaacatggcttcacca 148310
>gb|AF355773.1| Bartonella birtlesii 60 KDa heat shock protein (groEl) gene, partial cds Length = 1418 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 511 aagaccaacgatttagctggagatggaacaac 542 |||||||||||| | ||||| ||||||||||| Sbjct: 21 aagaccaacgatattgctggtgatggaacaac 52
>gb|AC003060.1| Mus musculus Chromosome 16 BAC Clone 72k21 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 118235 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 agccaccaagaagctccagg 325 |||||||||||||||||||| Sbjct: 65791 agccaccaagaagctccagg 65810
>emb|CR385048.3| Wallaby DNA sequence from clone XX-121C8, complete sequence Length = 37081 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agaagctccaggttggagtc 333 |||||||||||||||||||| Sbjct: 5286 agaagctccaggttggagtc 5305
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctggagatggaacaactac 545 |||||||||||||||||||| Sbjct: 20461 gctggagatggaacaactac 20480
>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 agccaccaagaagctccagg 325 |||||||||||||||||||| Sbjct: 98967 agccaccaagaagctccagg 98986
>gb|AF351209.1|AF351209 Rana catesbeiana RNase A-type ribonuclease rc208 precursor, gene, complete cds Length = 402 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ttgtcaatgatggtgttacagttg 442 ||||| |||||||||||||||||| Sbjct: 140 ttgtccatgatggtgttacagttg 117
>gb|AF351207.1|AF351207 Rana catesbeiana RNase A-type ribonuclease rc203 precursor, gene, complete cds Length = 399 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ttgtcaatgatggtgttacagttg 442 ||||| |||||||||||||||||| Sbjct: 140 ttgtccatgatggtgttacagttg 117
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctggcagatcttgttggag 358 |||||||||||||||||||| Sbjct: 6647592 gctggcagatcttgttggag 6647611
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cagacaagaagccattttca 198 |||||||||||||||||||| Sbjct: 9931 cagacaagaagccattttca 9950
>gb|AC016730.9| Homo sapiens BAC clone RP11-375H3 from 2, complete sequence Length = 172243 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aggaaaacatggcttcacca 126 |||||||||||||||||||| Sbjct: 151254 aggaaaacatggcttcacca 151235
>gb|AF276193.1|AF276193 Scaphirhynchus platorynchus microsatellite Spl-151 sequence Length = 517 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 ctcaggggctcattgctgag 579 |||||||||||||||||||| Sbjct: 331 ctcaggggctcattgctgag 350
>gb|AC084474.1|CBRG01A7 Caenorhabditis briggsae cosmid G01A7, complete sequence Length = 18839 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 aagccattttcattgtcatctatc 210 ||||||||||||||||||| |||| Sbjct: 17673 aagccattttcattgtcatttatc 17696
>gb|AF039104.1|AF039104 Rana catesbeiana ribonuclease precursor (rcr) mRNA, complete cds Length = 883 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 ttgtcaatgatggtgttacagttg 442 ||||| |||||||||||||||||| Sbjct: 383 ttgtccatgatggtgttacagttg 360
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctggcagatcttgttggag 358 |||||||||||||||||||| Sbjct: 127763 gctggcagatcttgttggag 127782
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 gtcgtccttgctcaggggct 569 |||||||||||||||||||| Sbjct: 64496 gtcgtccttgctcaggggct 64515
>dbj|AB048352.1| Paramecium caudatum gene for hsp60, partial cds Length = 542 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggaccaaagggaaggaatgttgtt 390 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24
>gb|AY108268.1| Zea mays PCO078526 mRNA sequence Length = 1437 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cccctcacccgcacccgccc 46 |||||||||||||||||||| Sbjct: 402 cccctcacccgcacccgccc 421
>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete sequence Length = 192196 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 gtgttacagttgcaagagag 450 |||||||||||||||||||| Sbjct: 147349 gtgttacagttgcaagagag 147330
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggaccaaagggaaggaatgttgtt 390 ||||||||||||||||| |||||| Sbjct: 532617 ggaccaaagggaaggaacgttgtt 532640
>gb|AC132475.4| Mus musculus BAC clone RP23-114P16 from 3, complete sequence Length = 215899 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 aggatcctgttgaaaatatt 480 |||||||||||||||||||| Sbjct: 55483 aggatcctgttgaaaatatt 55502
>dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-78G22, complete sequence Length = 102488 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ttcattgtcatctatctccc 214 |||||||||||||||||||| Sbjct: 75546 ttcattgtcatctatctccc 75565
>dbj|AB086955.1| Clostridium botulinum genes for GroES homolog, GroEL homolog, complete cds Length = 2634 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 361 acattgggaccaaagggaaggaatgttgtttt 392 ||||| |||||||| ||||| ||||||||||| Sbjct: 753 acattaggaccaaaaggaagaaatgttgtttt 784
>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete sequence Length = 158592 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 caagaagctccaggttggagtcaa 335 ||||||||||||| |||||||||| Sbjct: 112036 caagaagctccagattggagtcaa 112013
>dbj|AB072441.1| Tetrahymena pyriformis hsp60 gene for heat shock 60kD protein, partial cds Length = 516 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggaccaaagggaaggaatgttgtt 390 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24
>dbj|AB072440.1| Tetrahymena thermophila hsp60 gene for heat shock 60kD protein, partial cds Length = 516 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggaccaaagggaaggaatgttgtt 390 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,368,739 Number of Sequences: 3902068 Number of extensions: 5368739 Number of successful extensions: 93457 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93112 Number of HSP's gapped (non-prelim): 325 length of query: 669 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 646 effective length of database: 17,143,297,704 effective search space: 11074570316784 effective search space used: 11074570316784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
