>RS25A_ARATH (Q9SIK2) 40S ribosomal protein S25-1|
          Length = 108

 Score =  102 bits (253), Expect = 3e-22
 Identities = 49/61 (80%), Positives = 57/61 (93%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATN 182
           YDKLLTE PK+K ITPS+LS+R+RINGSLARRAI++LM +GLIRMVS HSSQQI+TRATN
Sbjct: 48  YDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATN 107

Query: 183 T 185
           T
Sbjct: 108 T 108

>RS25B_ARATH (Q9T029) 40S ribosomal protein S25-2|
          Length = 108

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 47/61 (77%), Positives = 57/61 (93%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATN 182
           YDKLLTE PK+K ITPS+LS+R+RINGSLARRAI++LM +G+IRMV+ HSSQQI+TRATN
Sbjct: 48  YDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATN 107

Query: 183 T 185
           T
Sbjct: 108 T 108

>RS25_LYCES (P46301) 40S ribosomal protein S25|
          Length = 108

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 49/61 (80%), Positives = 56/61 (91%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATN 182
           YDKLL+E PKYK ITPSVLS+RLRI+GSLAR+AI+DLM RG IRMVS H+SQQI+TRATN
Sbjct: 48  YDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATN 107

Query: 183 T 185
           T
Sbjct: 108 T 108

>RS25_BRABE (Q8ISN9) 40S ribosomal protein S25|
          Length = 123

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 39/59 (66%), Positives = 49/59 (83%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITPSV+SERL+I GSLAR A+K+L  +G+I++VS HS+Q I+TRAT
Sbjct: 51  YDKLYKEVPSYKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRAT 109

>RS25_AMACR (Q94G66) 40S ribosomal protein S25|
          Length = 114

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 38/60 (63%), Positives = 48/60 (80%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATN 182
           +DKLL+E  K K +T + LSER RINGSLARRAI++L+ RG I+MV  HSS QI+TR+TN
Sbjct: 47  FDKLLSEAGKQKVVTAATLSERFRINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106

>RS25_SHEEP (Q6Q311) 40S ribosomal protein S25|
          Length = 125

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITP+V+SERL+I GSLAR A+++L+ +GLI++VS H +Q I+TR T
Sbjct: 55  YDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113

>RS25_RAT (P62853) 40S ribosomal protein S25|
          Length = 125

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITP+V+SERL+I GSLAR A+++L+ +GLI++VS H +Q I+TR T
Sbjct: 55  YDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113

>RS25_MOUSE (P62852) 40S ribosomal protein S25|
          Length = 125

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITP+V+SERL+I GSLAR A+++L+ +GLI++VS H +Q I+TR T
Sbjct: 55  YDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113

>RS25_HUMAN (P62851) 40S ribosomal protein S25|
          Length = 125

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITP+V+SERL+I GSLAR A+++L+ +GLI++VS H +Q I+TR T
Sbjct: 55  YDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113

>RS25_DROME (P48588) 40S ribosomal protein S25|
          Length = 117

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           Y+KL  EVP YK ITPSV+SERL+I GSLA+RA+ +L E+GLI+ V  H SQ I+TRAT
Sbjct: 54  YEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRAT 112

>RS25_BRARE (Q6PBI5) 40S ribosomal protein S25|
          Length = 124

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 36/59 (61%), Positives = 48/59 (81%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITP+V+SERL+I GSLAR A+++L+ +GLI++VS H +Q I+TR T
Sbjct: 54  YDKLYKEVPNYKLITPAVVSERLKIRGSLARAALQELLGKGLIKLVSKHRAQVIYTRNT 112

>RS25_SPOFR (Q962Q5) 40S ribosomal protein S25|
          Length = 119

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 36/59 (61%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           Y+KL  EVP+YK ITP+V+SERL++ GSLARRA+ +L E+GLI+ V  H  Q I+TRAT
Sbjct: 54  YEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 112

>RS25_ICTPU (Q90YP9) 40S ribosomal protein S25|
          Length = 124

 Score = 73.9 bits (180), Expect = 8e-14
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YDKL  EVP YK ITP+V+SERL+I GSLAR A+ +L+ +G+I++VS H +Q I+TR T
Sbjct: 54  YDKLYKEVPNYKLITPAVVSERLKIRGSLARAALLELLSKGMIKLVSKHRAQVIYTRNT 112

>RS25A_YEAST (Q3E792) 40S ribosomal protein S25-A precursor (S31) (YS23) (RP45)|
          Length = 108

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 31/59 (52%), Positives = 45/59 (76%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           YD++L EVP Y+ ++ SVL +RL+I GSLAR A++ L + G+I+ +S HS Q I+TRAT
Sbjct: 47  YDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQAIYTRAT 105

>RS25_CAEEL (P52821) 40S ribosomal protein S25|
          Length = 117

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 32/66 (48%), Positives = 45/66 (68%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATN 182
           YDKL  EV  YK ITPSV+SERL++  SLA+  +K+L  +GL++ V  H  Q ++TRAT 
Sbjct: 51  YDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAKGLVKCVVHHHGQVVYTRATK 110

Query: 183 T*FIII 200
              +I+
Sbjct: 111 EADVIV 116

>RS25B_SCHPO (O74172) 40S ribosomal protein S25-B (S31-B)|
          Length = 88

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +3

Query: 6   DKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRA 176
           D++  EVP +K I+ SVL +R++INGSLAR AI+DL ERG+I+ V  HS Q I+TRA
Sbjct: 28  DRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVDQHSKQAIYTRA 84

>RS25B_YEAST (P0C0T4) 40S ribosomal protein S25-B precursor (S31) (YS23) (RP45)|
          Length = 108

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 30/58 (51%), Positives = 44/58 (75%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRA 176
           YD++L EVP Y+ ++ SVL +RL+I GSLAR A++ L + G+I+ +S HS Q I+TRA
Sbjct: 47  YDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQAIYTRA 104

>RS25A_SCHPO (P79009) 40S ribosomal protein S25-A (S31-A)|
          Length = 89

 Score = 63.9 bits (154), Expect = 9e-11
 Identities = 32/56 (57%), Positives = 43/56 (76%)
 Frame = +3

Query: 6   DKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTR 173
           D++  EVP +K I+ SVL +R++INGSLAR AI+DL ERG+I+ V  HS Q I+TR
Sbjct: 28  DRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVDQHSKQAIYTR 83

>RS25_LEIIN (Q9N9V4) 40S ribosomal protein S25|
          Length = 120

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTR 173
           YDKL +EVPKYK ITPS++S+RL+I  S+A   +K L    LIR+VS  S  +++TR
Sbjct: 47  YDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLVSCSSKTRVYTR 103

>RS25_ASHGO (Q75DJ1) 40S ribosomal protein S25|
          Length = 108

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 29/58 (50%), Positives = 43/58 (74%)
 Frame = +3

Query: 6   DKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           D++L EVP Y+ ++ SVL +RL+I GS+AR A++ L   G+I+ +S HS Q I+TRAT
Sbjct: 48  DRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLETEGIIKPISKHSKQAIYTRAT 105

>RS25_NEUCR (Q7SC06) 40S ribosomal protein S25|
          Length = 97

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +3

Query: 6   DKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRA 176
           DKL  +V  Y+ +T + L +RL+INGSLARR +KDL E+G I+ V  HS  +I+TRA
Sbjct: 36  DKLYKDVQSYRLVTVATLVDRLKINGSLARRCLKDLEEKGQIKQVVGHSKMKIYTRA 92

>RS25_CANGA (Q6FPX5) 40S ribosomal protein S25|
          Length = 107

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 28/59 (47%), Positives = 44/59 (74%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRAT 179
           +D++L EVP Y+ ++ SVL +RL+I GS+AR A++ L   G+I+ +S HS Q I+TRA+
Sbjct: 47  FDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLEREGIIKPISKHSKQAIYTRAS 105

>RS25_DICDI (Q03409) 40S ribosomal protein S25 (S31)|
          Length = 110

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRA 176
           Y KLL E+P  K IT +V+SER++ NGSLARRAIK+L+ +GLI+ +       ++T+A
Sbjct: 52  YAKLLKEMPTAKVITTAVVSERMKCNGSLARRAIKELLSKGLIKQIIKGHGNGVYTKA 109

>MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc transporter|
           ZAT-1) (ZAT1p) [Contains: Metal tolerance protein 1
           short form]
          Length = 398

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = -2

Query: 272 GHSELEYNSNTSVYWTREHSHRTHDNDKSGVCGPGEDLLAGVDRHHPNEPPLHQVLDSPA 93
           GH    +N +  V  T  H H  H++  S   G GE      D+HH +     Q+LD   
Sbjct: 193 GHGHDHHNHSHGVTVTTHHHHHDHEHGHSH--GHGE------DKHHAHGDVTEQLLDKSK 244

Query: 92  SQRA 81
           +Q A
Sbjct: 245 TQVA 248

>FTSK2_RALSO (Q8XWX9) DNA translocase ftsK 2|
          Length = 781

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 16/60 (26%), Positives = 34/60 (56%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRATN 182
           YD+ +  V K ++ + S++   LRI  + A R ++D+ + GL+  +S + +++I     N
Sbjct: 715 YDQAVDVVLKNRRASISLVQRHLRIGYNRAARLLEDMEKAGLVSAMSGNGNREILAPNRN 774

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -2

Query: 176 GPGEDLLAGVDR---HHPNEPPLHQVLDSPASQRAIDPESLG 60
           G G    AG DR   HH +  PL   LD PA+ R +DP  LG
Sbjct: 243 GGGGAPSAGGDRGRHHHQHREPL---LDEPAAARRLDPRPLG 281

>RS25_AERPE (Q9Y914) 30S ribosomal protein S25e|
          Length = 103

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +3

Query: 21  EVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLI 131
           EV + + +TP  L++++ +  S+ARR ++ L E G++
Sbjct: 41  EVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVL 77

>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 323  YQNSKAIQHYWWHKCLPGHSELEYN 249
            Y+NSKA +H W  + + G ++ EYN
Sbjct: 1215 YRNSKAKKHVWVGETINGGTQFEYN 1239

>UVRC_NOCFA (Q5YTP9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 673

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -2

Query: 200 DNDKSGVCGPGEDLLAGVDRHHPNEPPLHQVLDSPASQRAIDPESLGEDGWRDLLVLG 27
           D+D++    PG D   G  R     P L+ V+D  A Q A   E L E G  D+ V+G
Sbjct: 507 DDDETPTSRPGIDPTTGRPRKFAYPPNLY-VVDGGAPQVAAAAEVLDELGITDVAVIG 563

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -2

Query: 176 GPGEDLLAGVDR---HHPNEPPLHQVLDSPASQRAIDPESLG 60
           G G     G DR   HH +  PL   LD PA+ R +DP  LG
Sbjct: 251 GGGGAPSGGGDRGRHHHQHREPL---LDEPAAARRLDPRPLG 289

>IRAK1_HUMAN (P51617) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)|
           (IRAK-1)
          Length = 712

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -2

Query: 176 GPG------EDLLAGVDRHHPNEPPLHQVLDSPASQRAIDPESLGEDGWRDLLVL 30
           GPG      E L  G      +EPP  Q++ +PA Q+ +   +L EDG  D L L
Sbjct: 634 GPGSRPTAVEGLALGSSASSSSEPP--QIIINPARQKMVQKLALYEDGALDSLQL 686

>RS25_PYRAE (Q8ZVP1) 30S ribosomal protein S25e|
          Length = 110

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +3

Query: 3   YDKLLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQIFTRA 176
           +  +  EV   + ITP  ++ +  I  S+A + +++L ERG + +V+     +I+  A
Sbjct: 50  FQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRTEIYVPA 107

>REG4_PYRFU (Q8U2H1) Putative HTH-type transcriptional regulator PF0864|
          Length = 162

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +3

Query: 12  LLTEVPKYKQITPSVLSERLRINGSLARRAIKDLMERGLIRMVSIHSSQQI 164
           +L  + K  ++T S LSE+L+   S     IK L ERG+I   +I   +Q+
Sbjct: 13  ILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERYTIILGEQL 63

>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 323  YQNSKAIQHYWWHKCLPGHSELEYN 249
            Y+NSK  +H W  + + G ++ EYN
Sbjct: 1217 YRNSKVKKHIWLGETINGGTQFEYN 1241

>PO21_SCICO (Q03279) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 869

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 119 EGAH*DGVYPLQPADLHQGHKHLIYHYHVFYGCV 220
           +GA  DGV P     L   +K L+Y+  VFYG V
Sbjct: 173 KGAGPDGVTPRSWNALDDRYKRLLYNIFVFYGRV 206

>CO1A2_RABIT (Q28668) Collagen alpha-2(I) chain precursor (Fragment)|
          Length = 526

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 323 YQNSKAIQHYWWHKCLPGHSELEYN 249
           Y++SKA +H W  + + G ++ EYN
Sbjct: 377 YKSSKAKKHVWLGETINGGTQFEYN 401

>AMBN_HUMAN (Q9NP70) Ameloblastin precursor|
          Length = 447

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 22/78 (28%), Positives = 26/78 (33%)
 Frame = -2

Query: 323 YQNSKAIQHYWWHKCLPGHSELEYNSNTSVYWTREHSHRTHDNDKSGVCGPGEDLLAGVD 144
           Y   K+    W H  LP HS L         W R   H T   + S    P    L    
Sbjct: 65  YGFGKSFNSLWMHGLLPPHSSLP--------WMRPREHETQQYEYSLPVHPPP--LPSQP 114

Query: 143 RHHPNEPPLHQVLDSPAS 90
              P +P L   L S A+
Sbjct: 115 SLKPQQPGLKPFLQSAAA 132

>POLN_WEEV (P13896) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = -2

Query: 236  VYWTREHSHRTHDNDKSGVCGPGEDLLAGVDRHHPNEPPLHQVLDSPASQRA 81
            V++ +++ + THD D+ GV    +++  G  R+     P ++V+    S+ A
Sbjct: 1293 VFFGKDNGNHTHDQDRLGVV--LDNIYQGSTRYEAGRAPAYRVIRGDISKSA 1342


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,751,512
Number of Sequences: 219361
Number of extensions: 1068638
Number of successful extensions: 3791
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3789
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)