ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 5e-40
2gb|AY104130.1| Zea mays PCO108152 mRNA sequence 153 5e-34
3gb|BT017338.1| Zea mays clone EL01N0321D06.c mRNA sequence 149 8e-33
4gb|AY105144.1| Zea mays PCO097109 mRNA sequence 149 8e-33
5gb|BT017506.1| Zea mays clone EL01N0417A01.c mRNA sequence 145 1e-31
6gb|AY106520.1| Zea mays PCO097110 mRNA sequence 133 5e-28
7ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-group... 119 7e-24
8ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-group... 119 7e-24
9ref|XM_483765.1| Oryza sativa (japonica cultivar-group), mRNA 119 7e-24
10dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 7e-24
11dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 7e-24
12dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 7e-24
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
14dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
15dbj|AK058630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
16gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
17gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
20dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
21gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
22emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H 66 9e-08
23ref|XM_812742.1| Trypanosoma cruzi strain CL Brener ribosomal pr... 46 0.084
24ref|XM_814621.1| Trypanosoma cruzi strain CL Brener ribosomal pr... 46 0.084
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.084
26dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.084
27emb|AJ278541.1|LIN278541 Leishmania infantum mRNA for ribosomal ... 46 0.084
28gb|AC025187.6| Homo sapiens chromosome 5 clone CTD-2383I20, comp... 44 0.33
29gb|AC025773.7| Homo sapiens chromosome 5 clone CTD-2287N17, comp... 44 0.33
30ref|XM_869565.1| PREDICTED: Bos taurus similar to tyrosyl-DNA ph... 40 5.2
31gb|BT013272.1| Lycopersicon esculentum clone 134845F, mRNA sequence 40 5.2
32emb|CR925773.4| Zebrafish DNA sequence from clone DKEY-88O9 in l... 40 5.2
33gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, com... 40 5.2
34gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, c... 40 5.2
35emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 5.2
36emb|BX957312.8| Zebrafish DNA sequence from clone CH211-146H22 i... 40 5.2
37emb|CR626867.6| Human DNA sequence from clone XX-HCC1954_8J23, c... 40 5.2
38emb|CR626880.9| Human DNA sequence from clone XX-HCC1954_11K06, ... 40 5.2
39emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, ... 40 5.2
40emb|X76714.1|LERPS25 L.esculentum Mill (cv. Rutgers) mRNA for ri... 40 5.2
41gb|AC147871.3| Monodelphis domestica clone VMRC6-42O6, complete ... 40 5.2
42dbj|AB096614.1| Homo sapiens DNA, 16.5kb-T5 rearranged sequence 40 5.2
43dbj|AB096613.1| Homo sapiens DNA, 20kb-MKN7 rearranged sequence 40 5.2
44dbj|AB096612.1| Homo sapiens DNA, 13kb-normal EcoRI sequence 40 5.2
45emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chro... 40 5.2
46gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 5.2 
>dbj|AK059234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E11, full
           insert sequence
          Length = 510

 Score =  172 bits (87), Expect = 5e-40
 Identities = 162/187 (86%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 203 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 262

                                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagagg 122
           ||||| |||||||| ||||| || |||||| | |||||||| ||||| |||||||| |||
Sbjct: 263 gagcgcctcaggattaatgggtccctggctaggagggctatgaaggatctgatggatagg 322

                                                                       
Query: 123 gggctcattaggatggtgtctatccactccagccagcagatcttcaccagggccacaaac 182
           ||||| || |||||||||||  | || | |||||| ||||| | ||||||||| || |||
Sbjct: 323 gggcttatcaggatggtgtcggttcattgcagccaacagatttacaccagggcaacgaac 382

                  
Query: 183 acctgat 189
           || ||||
Sbjct: 383 acatgat 389
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>gb|AY104130.1| Zea mays PCO108152 mRNA sequence
          Length = 745

 Score =  153 bits (77), Expect = 5e-34
 Identities = 149/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| | |||||||||||||||||||| ||||| || ||| ||||||||
Sbjct: 206 tacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctcc 265

                                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagagg 122
           ||||| || |||||||| ||||| || ||||| ||||| ||||||||| |||||| | | 
Sbjct: 266 gagcgtctgaggatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgt 325

                                                                
Query: 123 gggctcattaggatggtgtctatccactccagccagcagatcttcaccagggc 175
           || |||||| ||||||| ||  ||||||| ||||||||||||| |||||||||
Sbjct: 326 ggcctcattcggatggtctcggtccactcaagccagcagatctacaccagggc 378
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>gb|BT017338.1| Zea mays clone EL01N0321D06.c mRNA sequence
          Length = 620

 Score =  149 bits (75), Expect = 8e-33
 Identities = 153/179 (85%)
 Strand = Plus / Plus

                                                                       
Query: 6   gacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctccgag 65
           |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gacaagttgctctccgaggtgcccaagtacaagcagatcaccccatccgtcctctccgag 260

                                                                       
Query: 66  cgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagaggggg 125
           || |||||||| ||||| ||  |||| || ||||| |||||||| |||||||  ||||| 
Sbjct: 261 cgtctcaggattaatggatcattggcacggagggcaatcaaggatctgatggcaagggga 320

                                                                      
Query: 126 ctcattaggatggtgtctatccactccagccagcagatcttcaccagggccacaaacac 184
            |||| |||||| | ||| | || |||||||||||||| | ||||||||| || |||||
Sbjct: 321 ttcataaggatgatctctgttcattccagccagcagatatacaccagggcaaccaacac 379
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>gb|AY105144.1| Zea mays PCO097109 mRNA sequence
          Length = 682

 Score =  149 bits (75), Expect = 8e-33
 Identities = 153/179 (85%)
 Strand = Plus / Plus

                                                                       
Query: 6   gacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctccgag 65
           |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 282 gacaagttgctctccgaggtgcccaagtacaagcagatcaccccatccgtcctctccgag 341

                                                                       
Query: 66  cgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagaggggg 125
           || |||||||| ||||| ||  |||| || ||||| |||||||| |||||||  ||||| 
Sbjct: 342 cgtctcaggattaatggatcattggcacggagggcaatcaaggatctgatggcaagggga 401

                                                                      
Query: 126 ctcattaggatggtgtctatccactccagccagcagatcttcaccagggccacaaacac 184
            |||| |||||| | ||| | || |||||||||||||| | ||||||||| || |||||
Sbjct: 402 ttcataaggatgatctctgttcattccagccagcagatatacaccagggcaaccaacac 460
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>gb|BT017506.1| Zea mays clone EL01N0417A01.c mRNA sequence
          Length = 619

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| | |||||||||||||||||||| ||||| || ||| ||||||||
Sbjct: 206 tacgacaagctgctctcggaggtgcccaagtacaagcaaatcaccccttccatcctctcc 265

                                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagagg 122
           ||||| || |||||||| ||||| || ||||| ||||| ||||||||| |||||| | | 
Sbjct: 266 gagcgtctgaggatcaacggctcccttgctcggagggccatcaaggacttgatggcgcgt 325

                                                                
Query: 123 gggctcattaggatggtgtctatccactccagccagcagatcttcaccagggc 175
           || |||||| ||||||| ||  ||||||| |||||||| |||| |||||||||
Sbjct: 326 ggcctcattcggatggtctcggtccactcaagccagcaaatctacaccagggc 378
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>gb|AY106520.1| Zea mays PCO097110 mRNA sequence
          Length = 779

 Score =  133 bits (67), Expect = 5e-28
 Identities = 157/187 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||| || 
Sbjct: 289 tacgataagctgctctccgaggtgcccaagtacaagcagatcaccccatccatcctatct 348

                                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagagg 122
           ||||| |||||| | ||||| ||  |||| || ||||| |||||||| |||||||  | |
Sbjct: 349 gagcgcctcagggttaatggatccttggcacggagggccatcaaggatctgatggcaaag 408

                                                                       
Query: 123 gggctcattaggatggtgtctatccactccagccagcagatcttcaccagggccacaaac 182
           |||||||| |||||||| ||| | || || ||||||||||| | ||||||||| || |||
Sbjct: 409 gggctcataaggatggtctctgttcattctagccagcagatatacaccagggcaaccaac 468

                  
Query: 183 acctgat 189
           || ||||
Sbjct: 469 acatgat 475
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>ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA
          Length = 620

 Score =  119 bits (60), Expect = 7e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 223 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 282

                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaa 106
           ||| ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 283 gagagactcaggatcaacgggtccctggctcgtagggccatcaa 326



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 147 cactccagccagcagatcttcaccagggccacaaacacct 186
           ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 367 cactcaagccagcagatctacaccagggcaaccaacacct 406
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>ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA
          Length = 619

 Score =  119 bits (60), Expect = 7e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 224 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 283

                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaa 106
           ||| ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 284 gagagactcaggatcaacgggtccctggctcgtagggccatcaa 327



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 147 cactccagccagcagatcttcaccagggccacaaacacct 186
           ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 368 cactcaagccagcagatctacaccagggcaaccaacacct 407
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>ref|XM_483765.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 619

 Score =  119 bits (60), Expect = 7e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 224 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 283

                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaa 106
           ||| ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 284 gagagactcaggatcaacgggtccctggctcgtagggccatcaa 327



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 147 cactccagccagcagatcttcaccagggccacaaacacct 186
           ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 368 cactcaagccagcagatctacaccagggcaaccaacacct 407
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>dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F23, full
           insert sequence
          Length = 629

 Score =  119 bits (60), Expect = 7e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 234 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 293

                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaa 106
           ||| ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 294 gagagactcaggatcaacgggtccctggctcgtagggccatcaa 337



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 147 cactccagccagcagatcttcaccagggccacaaacacct 186
           ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 378 cactcaagccagcagatctacaccagggcaaccaacacct 417
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>dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154N05, full
           insert sequence
          Length = 619

 Score =  119 bits (60), Expect = 7e-24
 Identities = 153/184 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 224 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 283

                                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaaggacctgatggagagg 122
           ||| ||||||||||||| || || |||||||| ||||| ||||| ||  | |||    ||
Sbjct: 284 gagagactcaggatcaacgggtccctggctcgtagggccatcaatgatttaatgacacgg 343

                                                                       
Query: 123 gggctcattaggatggtgtctatccactccagccagcagatcttcaccagggccacaaac 182
           || || ||  | ||||||||  | ||||| ||||||||||||| ||||||||| || |||
Sbjct: 344 ggcctaatccgcatggtgtcggttcactcaagccagcagatctacaccagggcaaccaac 403

               
Query: 183 acct 186
           ||||
Sbjct: 404 acct 407
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>dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B04, full
           insert sequence
          Length = 620

 Score =  119 bits (60), Expect = 7e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 223 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 282

                                                       
Query: 63  gagcgactcaggatcaatggctctctggctcgcagggctatcaa 106
           ||| ||||||||||||| || || |||||||| ||||| |||||
Sbjct: 283 gagagactcaggatcaacgggtccctggctcgtagggccatcaa 326



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 147 cactccagccagcagatcttcaccagggccacaaacacct 186
           ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 367 cactcaagccagcagatctacaccagggcaaccaacacct 406
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 3        tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
                ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 22401335 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 22401276

                            
Query: 63       gagcgactcagg 74
                ||||| ||||||
Sbjct: 22401275 gagcgcctcagg 22401264



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                            
Query: 78       aatggctctctggctcgcagggctatcaaggacctgatggagagggggctcattaggatg 137
                ||||| || |||||| | |||||||| ||||| |||||||| |||||||| || ||||||
Sbjct: 22400644 aatgggtccctggctaggagggctatgaaggatctgatggatagggggcttatcaggatg 22400585

                                                                    
Query: 138      gtgtctatccactccagccagcagatcttcaccagggccacaaacacctgat 189
                |||||  | || | |||||| ||||| | ||||||||| || ||||| ||||
Sbjct: 22400584 gtgtcggttcattgcagccaacagatttacaccagggcaacgaacacatgat 22400533
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>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1003_C09
          Length = 124746

 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                         
Query: 3     tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
             ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 37824 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 37765

                         
Query: 63    gagcgactcagg 74
             ||||| ||||||
Sbjct: 37764 gagcgcctcagg 37753



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                         
Query: 78    aatggctctctggctcgcagggctatcaaggacctgatggagagggggctcattaggatg 137
             ||||| || |||||| | |||||||| ||||| |||||||| |||||||| || ||||||
Sbjct: 37133 aatgggtccctggctaggagggctatgaaggatctgatggatagggggcttatcaggatg 37074

                                                                 
Query: 138   gtgtctatccactccagccagcagatcttcaccagggccacaaacacctgat 189
             |||||  | || | |||||| ||||| | ||||||||| || ||||| ||||
Sbjct: 37073 gtgtcggttcattgcagccaacagatttacaccagggcaacgaacacatgat 37022
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>dbj|AK058630.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C09, full
           insert sequence
          Length = 604

 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                       
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
           ||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 221 tacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 280

                               
Query: 63  gagcgactcaggatcaatgg 82
           ||| | ||||||||||||||
Sbjct: 281 gagaggctcaggatcaatgg 300
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>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032M21 map C83B, complete sequence
          Length = 48636

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 3     tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
             ||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 39822 tacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 39881

                         
Query: 63    gagcgactcagg 74
             ||| | ||||||
Sbjct: 39882 gagaggctcagg 39893
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>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09
              map C83B, complete sequence
          Length = 123477

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                          
Query: 3      tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
              ||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 116979 tacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 116920

                          
Query: 63     gagcgactcagg 74
              ||| | ||||||
Sbjct: 116919 gagaggctcagg 116908
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                           
Query: 3       tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
               ||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2505425 tacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 2505484

                           
Query: 63      gagcgactcagg 74
               ||| | ||||||
Sbjct: 2505485 gagaggctcagg 2505496
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                            
Query: 3        tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
                ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 27966176 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 27966235

                            
Query: 63       gagcgactcagg 74
                ||| ||||||||
Sbjct: 27966236 gagagactcagg 27966247



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 147      cactccagccagcagatcttcaccagggccacaaacacct 186
                ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 27967152 cactcaagccagcagatctacaccagggcaaccaacacct 27967191
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>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0562A06
          Length = 154198

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 3     tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
             ||||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||| 
Sbjct: 43668 tacgacaagctgctctccgaggtgcccaagtacaagcagatcaccccctccgttctctct 43727

                         
Query: 63    gagcgactcagg 74
             ||| ||||||||
Sbjct: 43728 gagagactcagg 43739



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 147   cactccagccagcagatcttcaccagggccacaaacacct 186
             ||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 44644 cactcaagccagcagatctacaccagggcaaccaacacct 44683
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                           
Query: 3       tacgacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatccgtcctctcc 62
               ||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2514456 tacgacaagcttctctccgaggtgcccaagtacaagcagatcaccccctccgtcctctcc 2514515

                           
Query: 63      gagcgactcagg 74
               ||| | ||||||
Sbjct: 2514516 gagaggctcagg 2514527
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>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H
          Length = 59748

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 127 tcattaggatggtgtctatccactccagccagcagatcttcaccagggc 175
           |||||||||||||||| |||||||||| ||| ||||| |||||||||||
Sbjct: 5   tcattaggatggtgtcaatccactccatccaacagattttcaccagggc 53



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 279 gcacttgtgccaccagtaatgttgaattgcttttgagttttggtaca 325
           ||||||||||||| ||||||||| | ||||||||||||||| |||||
Sbjct: 175 gcacttgtgccacaagtaatgtttagttgcttttgagtttttgtaca 221
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>ref|XM_812742.1| Trypanosoma cruzi strain CL Brener ribosomal protein S25
           (Tc00.1047053509233.190) partial mRNA
          Length = 333

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 6   gacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatc 52
           ||||| || |||| ||||||||||||||||||   ||||||||||||
Sbjct: 160 gacaaacttctcagcgaggtgcccaagtacaaagtgatcacgccatc 206
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>ref|XM_814621.1| Trypanosoma cruzi strain CL Brener ribosomal protein S25
           (Tc00.1047053504105.94) partial mRNA
          Length = 333

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 6   gacaagctgctcaccgaggtgcccaagtacaagcagatcacgccatc 52
           ||||| || |||| ||||||||||||||||||   ||||||||||||
Sbjct: 160 gacaaacttctcagcgaggtgcccaagtacaaagtgatcacgccatc 206
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 138     gtgtctatccactccagccagcagatc 164
               |||||| ||||||||||||||||||||
Sbjct: 3634367 gtgtctctccactccagccagcagatc 3634393
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 138   gtgtctatccactccagccagcagatc 164
             |||||| ||||||||||||||||||||
Sbjct: 42847 gtgtctctccactccagccagcagatc 42873
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>emb|AJ278541.1|LIN278541 Leishmania infantum mRNA for ribosomal protein S25 (s25 gene)
          Length = 601

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 3   tacgacaagctgctcaccgaggtgcccaagtacaa 37
           ||||||||||| | || ||||||||||||||||||
Sbjct: 211 tacgacaagctccgcagcgaggtgcccaagtacaa 245
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>gb|AC025187.6| Homo sapiens chromosome 5 clone CTD-2383I20, complete sequence
          Length = 137219

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 300  ttgaattgcttttgagttttgg 321
            ||||||||||||||||||||||
Sbjct: 6023 ttgaattgcttttgagttttgg 6044
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>gb|AC025773.7| Homo sapiens chromosome 5 clone CTD-2287N17, complete sequence
          Length = 145876

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 300   ttgaattgcttttgagttttgg 321
             ||||||||||||||||||||||
Sbjct: 33193 ttgaattgcttttgagttttgg 33172
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>ref|XM_869565.1| PREDICTED: Bos taurus similar to tyrosyl-DNA phosphodiesterase 1
           (LOC617329), mRNA
          Length = 1206

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 ggatggtgtctatccactcc 152
           ||||||||||||||||||||
Sbjct: 409 ggatggtgtctatccactcc 390
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>gb|BT013272.1| Lycopersicon esculentum clone 134845F, mRNA sequence
          Length = 545

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 153 agccagcagatcttcaccagggccacaaacac 184
           ||||||||||||| ||||||||| || |||||
Sbjct: 335 agccagcagatctacaccagggctaccaacac 366
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>emb|CR925773.4| Zebrafish DNA sequence from clone DKEY-88O9 in linkage group 10,
            complete sequence
          Length = 47169

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  cacaaacacctgatttatca 195
            ||||||||||||||||||||
Sbjct: 1715 cacaaacacctgatttatca 1696
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>gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, complete sequence
          Length = 161815

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ttgctgttatattcaagttc 263
             ||||||||||||||||||||
Sbjct: 79124 ttgctgttatattcaagttc 79143
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>gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, complete sequence
          Length = 168585

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    ttgctgttatattcaagttc 263
              ||||||||||||||||||||
Sbjct: 116440 ttgctgttatattcaagttc 116459
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      cgacaagctgctcaccgagg 24
              ||||||||||||||||||||
Sbjct: 185588 cgacaagctgctcaccgagg 185569
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>emb|BX957312.8| Zebrafish DNA sequence from clone CH211-146H22 in linkage group 10,
             complete sequence
          Length = 96069

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   cacaaacacctgatttatca 195
             ||||||||||||||||||||
Sbjct: 92948 cacaaacacctgatttatca 92967
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>emb|CR626867.6| Human DNA sequence from clone XX-HCC1954_8J23, complete sequence
          Length = 89963

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   ttgctgttatattcaagttc 263
             ||||||||||||||||||||
Sbjct: 77387 ttgctgttatattcaagttc 77406
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>emb|CR626880.9| Human DNA sequence from clone XX-HCC1954_11K06, complete sequence
          Length = 151284

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    ttgctgttatattcaagttc 263
              ||||||||||||||||||||
Sbjct: 105516 ttgctgttatattcaagttc 105535
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>emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, complete sequence
          Length = 133968

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    gatcaatggctctctggctc 93
             ||||||||||||||||||||
Sbjct: 96432 gatcaatggctctctggctc 96451
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>emb|X76714.1|LERPS25 L.esculentum Mill (cv. Rutgers) mRNA for ribosomal protein S25
          Length = 520

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 153 agccagcagatcttcaccagggccacaaacac 184
           ||||||||||||| ||||||||| || |||||
Sbjct: 292 agccagcagatctacaccagggctaccaacac 323
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>gb|AC147871.3| Monodelphis domestica clone VMRC6-42O6, complete sequence
          Length = 142435

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   attcaagttcactatgtcca 273
             ||||||||||||||||||||
Sbjct: 47671 attcaagttcactatgtcca 47690
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>dbj|AB096614.1| Homo sapiens DNA, 16.5kb-T5 rearranged sequence
          Length = 16572

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  ttgctgttatattcaagttc 263
            ||||||||||||||||||||
Sbjct: 8051 ttgctgttatattcaagttc 8070
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>dbj|AB096613.1| Homo sapiens DNA, 20kb-MKN7 rearranged sequence
          Length = 20271

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  ttgctgttatattcaagttc 263
            ||||||||||||||||||||
Sbjct: 8051 ttgctgttatattcaagttc 8070
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>dbj|AB096612.1| Homo sapiens DNA, 13kb-normal EcoRI sequence
          Length = 13450

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  ttgctgttatattcaagttc 263
            ||||||||||||||||||||
Sbjct: 8051 ttgctgttatattcaagttc 8070
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>emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chromosome 2, complete
             sequence
          Length = 181372

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   tgcttttgagttttggtaca 325
             ||||||||||||||||||||
Sbjct: 74601 tgcttttgagttttggtaca 74620
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    attcaagttcactatgtcca 273
              ||||||||||||||||||||
Sbjct: 715662 attcaagttcactatgtcca 715681


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,309,624
Number of Sequences: 3902068
Number of extensions: 3309624
Number of successful extensions: 62003
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61847
Number of HSP's gapped (non-prelim): 156
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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