>CHEB_CLOAB (Q97GZ3) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 345

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
 Frame = +1

Query: 226 KHKRKELKKTQGKSVVNNVHKPIEHNPLGKDDTNRISKAIGKAADLAGSAKGKKSLHTLY 405
           K K   +K+ +     N    P   NP+ + +TNRIS    +A  +  S  G K+L+ + 
Sbjct: 117 KMKDDLIKRIRVAYSQNTNKNPAPINPVIRRETNRISSDSIEAVVIGASTGGPKALYKV- 175

Query: 406 IPTITNYTQVWWVPNVVVAH--------------EKEGIEAIHLASGRTLCK--LHLTEG 537
              IT + +   VP  VV H              +   IE      G T  K  +++  G
Sbjct: 176 ---ITKFPKDMNVPVFVVQHMPVGFTKAFADRLNDNSAIEVKEATDGETYRKGVVYVAPG 232

Query: 538 GLHADINGD 564
           G H +++ +
Sbjct: 233 GYHMEVDSN 241

>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/102 (27%), Positives = 40/102 (39%)
 Frame = +1

Query: 226 KHKRKELKKTQGKSVVNNVHKPIEHNPLGKDDTNRISKAIGKAADLAGSAKGKKSLHTLY 405
           +HK +E K+ + K      HK  EH   GK D  +  K   K A      K K   H   
Sbjct: 393 EHKEEEHKEEEHKK---EEHKSKEHKSKGKKDKGKKDKGKHKKAK-----KEKVKKHV-- 442

Query: 406 IPTITNYTQVWWVPNVVVAHEKEGIEAIHLASGRTLCKLHLT 531
                       V NV+   +K+G+E I+L       + H+T
Sbjct: 443 ------------VKNVIEDEDKDGVEIINLEDKEACEEQHIT 472

>POLG_DEN1W (P17763) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1);
           Nonstructural protein 2A (NS2A)] (Fragment)
          Length = 1226

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +1

Query: 232 KRKELKKTQGKSVVNNVHKPIEHNPLGKDDTNRISKAIGKA 354
           K +ELK   G  V N VH   E      D   R+S AIGKA
Sbjct: 784 KGRELKCGSGIFVTNEVHTWTEQYKFQADSPKRLSAAIGKA 824

>POLG_DEN1S (P33478) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1);
           Nonstructural protein 2A (NS2A); Flavivirin protease
           NS2B regulatory subunit;
          Length = 3396

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +1

Query: 232 KRKELKKTQGKSVVNNVHKPIEHNPLGKDDTNRISKAIGKA 354
           K +ELK   G  V N VH   E      D   R+S AIGKA
Sbjct: 783 KGRELKCGSGIFVTNEVHTWTEQYKFQADSPKRLSAAIGKA 823

>V56K_PLRVW (P11626) 56 kDa protein (ORF 6)|
          Length = 508

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +1

Query: 286 KPIEHNPLGKDDTNRISKAIGKAADLAGSAKGKKSLHTLYIPTITNYTQVWW 441
           +P+E   L KD T+ +S +IG  +   G+ K K+++    + T+T   ++W+
Sbjct: 421 QPLEGGTLKKDATDGVS-SIGSGSLTGGTLKRKETIEERLLQTLTTEQRLWY 471

>V56K_PLRV1 (P17525) 56 kDa protein (ORF 6)|
          Length = 508

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +1

Query: 286 KPIEHNPLGKDDTNRISKAIGKAADLAGSAKGKKSLHTLYIPTITNYTQVWW 441
           +P+E   L KD T+ +S +IG  +   G+ K K ++    + T+T   ++W+
Sbjct: 421 QPLEGGTLNKDATDGVS-SIGSGSLTGGTLKRKATIEERLLQTLTTEQRLWY 471

>CATZ_MOUSE (Q9WUU7) Cathepsin Z precursor (EC 3.4.22.-)|
          Length = 306

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +1

Query: 412 TITNYTQVWWVPNVVVAHEKEGIEAIHLASGRTLCKLHLTE------GGLHADINGDGVL 573
           TI NYT +W V +      +E + A   A+G   C +  TE      GG++A+     V+
Sbjct: 183 TIQNYT-LWRVGDYGSLSGREKMMAEIYANGPISCGIMATEMMSNYTGGIYAEHQDQAVI 241

Query: 574 DHVQVVGGNG 603
           +H+  V G G
Sbjct: 242 NHIISVAGWG 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.133    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,928,917
Number of Sequences: 219361
Number of extensions: 1561494
Number of successful extensions: 4839
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4834
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)