| Clone Name | bags32p14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463771.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2411 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 412 acaatcactaattatactcaagtttggtgggttcccaatgttgttgttgcacatgaaaag 471 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1331 acaatcaccaactatactcaagtttggtgggttcctaatgttgttgttgcccacgaaaaa 1390 Query: 472 gaagggatagaggctattcatctagcttctggacgtacgctttgcaagcttcatttgaca 531 ||||||||||||||| |||||||||||||||||||||| | |||||||||||||| ||| Sbjct: 1391 gaagggatagaggctgttcatctagcttctggacgtacaatctgcaagcttcatttaaca 1450 Query: 532 gaaggaggccttcatgcagatattaatggagatggagttctagatcatgttcaggttgtc 591 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1451 gaaggaggccttcatgcagatattaatggagatggggttctagaccatgttcaggttgtt 1510 Query: 592 ggtggaaatggtgctgagcaaactgttgttag 623 |||| |||||| |||||||| |||||||| Sbjct: 1511 ggtgcaaatggcatcgagcaaacagttgttag 1542 Score = 252 bits (127), Expect = 1e-63 Identities = 263/307 (85%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 14 agatggagccggaagaatgagaacatccaggcacaacc-tcagatgcttctgcgatgata 72 ||||||||||| ||||||||||| |||| | ||||| || |||||||| | | ||||| Sbjct: 932 agatggagccgaaagaatgagaatatcccatcgcaaccatccgatgcttcagtgctgata 991 Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||| | Sbjct: 992 ccacaacacaattacaagcttgatgcccatgcccttaatagtcgtcatcctggtcagttc 1051 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcctcaccattgggacaggaga 192 ||||| ||| |||| ||||||||| ||||||| ||||||||||| |||||||| |||||| Sbjct: 1052 gaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattgggataggaga 1111 Query: 193 gaggatacttccctacaacttgcacattttaggaagcataaaaggaaagaactaaagaaa 252 |||||||||| || |||||||| |||||||||| |||||||||||||| ||| |||||| Sbjct: 1112 gaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactgaagaaa 1171 Query: 253 acacaaggaaaaagcgttgttaataacgtgcacaagcctattgaacacaatccactcgga 312 |||| |||||| ||||| ||||||||||||||||| | |||||| ||||||| ||| Sbjct: 1172 acacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatccacctgga 1231 Query: 313 aaggatg 319 ||||||| Sbjct: 1232 aaggatg 1238
>dbj|AK068943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D03, full insert sequence Length = 2411 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 412 acaatcactaattatactcaagtttggtgggttcccaatgttgttgttgcacatgaaaag 471 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 1331 acaatcaccaactatactcaagtttggtgggttcctaatgttgttgttgcccacgaaaaa 1390 Query: 472 gaagggatagaggctattcatctagcttctggacgtacgctttgcaagcttcatttgaca 531 ||||||||||||||| |||||||||||||||||||||| | |||||||||||||| ||| Sbjct: 1391 gaagggatagaggctgttcatctagcttctggacgtacaatctgcaagcttcatttaaca 1450 Query: 532 gaaggaggccttcatgcagatattaatggagatggagttctagatcatgttcaggttgtc 591 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1451 gaaggaggccttcatgcagatattaatggagatggggttctagaccatgttcaggttgtt 1510 Query: 592 ggtggaaatggtgctgagcaaactgttgttag 623 |||| |||||| |||||||| |||||||| Sbjct: 1511 ggtgcaaatggcatcgagcaaacagttgttag 1542 Score = 252 bits (127), Expect = 1e-63 Identities = 263/307 (85%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 14 agatggagccggaagaatgagaacatccaggcacaacc-tcagatgcttctgcgatgata 72 ||||||||||| ||||||||||| |||| | ||||| || |||||||| | | ||||| Sbjct: 932 agatggagccgaaagaatgagaatatcccatcgcaaccatccgatgcttcagtgctgata 991 Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||| | Sbjct: 992 ccacaacacaattacaagcttgatgcccatgcccttaatagtcgtcatcctggtcagttc 1051 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcctcaccattgggacaggaga 192 ||||| ||| |||| ||||||||| ||||||| ||||||||||| |||||||| |||||| Sbjct: 1052 gaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattgggataggaga 1111 Query: 193 gaggatacttccctacaacttgcacattttaggaagcataaaaggaaagaactaaagaaa 252 |||||||||| || |||||||| |||||||||| |||||||||||||| ||| |||||| Sbjct: 1112 gaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactgaagaaa 1171 Query: 253 acacaaggaaaaagcgttgttaataacgtgcacaagcctattgaacacaatccactcgga 312 |||| |||||| ||||| ||||||||||||||||| | |||||| ||||||| ||| Sbjct: 1172 acacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatccacctgga 1231 Query: 313 aaggatg 319 ||||||| Sbjct: 1232 aaggatg 1238
>dbj|AK070106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K08, full insert sequence Length = 1806 Score = 252 bits (127), Expect = 1e-63 Identities = 263/307 (85%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 14 agatggagccggaagaatgagaacatccaggcacaacc-tcagatgcttctgcgatgata 72 ||||||||||| ||||||||||| |||| | ||||| || |||||||| | | ||||| Sbjct: 851 agatggagccgaaagaatgagaatatcccatcgcaaccatccgatgcttcagtgctgata 910 Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||| | Sbjct: 911 ccacaacacaattacaagcttgatgcccatgcccttaatagtcgtcatcctggtcagttc 970 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcctcaccattgggacaggaga 192 ||||| ||| |||| ||||||||| ||||||| ||||||||||| |||||||| |||||| Sbjct: 971 gaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattgggataggaga 1030 Query: 193 gaggatacttccctacaacttgcacattttaggaagcataaaaggaaagaactaaagaaa 252 |||||||||| || |||||||| |||||||||| |||||||||||||| ||| |||||| Sbjct: 1031 gaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactgaagaaa 1090 Query: 253 acacaaggaaaaagcgttgttaataacgtgcacaagcctattgaacacaatccactcgga 312 |||| |||||| ||||| ||||||||||||||||| | |||||| ||||||| ||| Sbjct: 1091 acacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatccacctgga 1150 Query: 313 aaggatg 319 ||||||| Sbjct: 1151 aaggatg 1157
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 412 acaatcactaattatactcaagtttggtgggttcccaatgttgttgttgcacatgaaaag 471 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 38601 acaatcaccaactatactcaagtttggtgggttcctaatgttgttgttgcccacgaaaaa 38660 Query: 472 gaagggatagaggctattcatctagcttctggacgtac 509 ||||||||||||||| |||||||||||||||||||||| Sbjct: 38661 gaagggatagaggctgttcatctagcttctggacgtac 38698 Score = 121 bits (61), Expect = 3e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 187 aggagagaggatacttccctacaacttgcacattttaggaagcataaaaggaaagaacta 246 |||||||||||||||| || |||||||| |||||||||| |||||||||||||| ||| Sbjct: 36859 aggagagaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactg 36918 Query: 247 aagaaaacacaaggaaaaagcgttgttaataacgtgcacaagcctattgaacacaatcca 306 |||||||||| |||||| ||||| ||||||||||||||||| | |||||| |||||| Sbjct: 36919 aagaaaacacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatcca 36978 Query: 307 ctcggaaaggatg 319 | |||||||||| Sbjct: 36979 cctggaaaggatg 36991 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 518 agcttcatttgacagaaggaggccttcatgcagatattaatggagatggagttctagatc 577 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 39040 agcttcatttaacagaaggaggccttcatgcagatattaatggagatggggttctagacc 39099 Query: 578 atgttcaggt 587 |||||||||| Sbjct: 39100 atgttcaggt 39109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 55 gatgcttctgcgatgataccacaacataattacaagcttgatgttcattcccttaataac 114 |||||||| | | ||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct: 36107 gatgcttcagtgctgataccacaacacaattacaagcttgatgcccatgcccttaatagt 36166 Query: 115 cgtcatcctggt 126 |||||||||||| Sbjct: 36167 cgtcatcctggt 36178 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 132 cgaatgccggcaattcagagaatcaattcttggcgtcatgcctcaccattggg 184 |||||| ||| |||| ||||||||| ||||||| ||||||||||| ||||||| Sbjct: 36711 cgaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattggg 36763
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 412 acaatcactaattatactcaagtttggtgggttcccaatgttgttgttgcacatgaaaag 471 |||||||| || ||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 33210 acaatcaccaactatactcaagtttggtgggttcctaatgttgttgttgcccacgaaaaa 33269 Query: 472 gaagggatagaggctattcatctagcttctggacgtac 509 ||||||||||||||| |||||||||||||||||||||| Sbjct: 33270 gaagggatagaggctgttcatctagcttctggacgtac 33307 Score = 121 bits (61), Expect = 3e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 187 aggagagaggatacttccctacaacttgcacattttaggaagcataaaaggaaagaacta 246 |||||||||||||||| || |||||||| |||||||||| |||||||||||||| ||| Sbjct: 31468 aggagagaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactg 31527 Query: 247 aagaaaacacaaggaaaaagcgttgttaataacgtgcacaagcctattgaacacaatcca 306 |||||||||| |||||| ||||| ||||||||||||||||| | |||||| |||||| Sbjct: 31528 aagaaaacacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatcca 31587 Query: 307 ctcggaaaggatg 319 | |||||||||| Sbjct: 31588 cctggaaaggatg 31600 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 518 agcttcatttgacagaaggaggccttcatgcagatattaatggagatggagttctagatc 577 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 33649 agcttcatttaacagaaggaggccttcatgcagatattaatggagatggggttctagacc 33708 Query: 578 atgttcaggt 587 |||||||||| Sbjct: 33709 atgttcaggt 33718 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 55 gatgcttctgcgatgataccacaacataattacaagcttgatgttcattcccttaataac 114 |||||||| | | ||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct: 30716 gatgcttcagtgctgataccacaacacaattacaagcttgatgcccatgcccttaatagt 30775 Query: 115 cgtcatcctggt 126 |||||||||||| Sbjct: 30776 cgtcatcctggt 30787 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 132 cgaatgccggcaattcagagaatcaattcttggcgtcatgcctcaccattggg 184 |||||| ||| |||| ||||||||| ||||||| ||||||||||| ||||||| Sbjct: 31320 cgaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattggg 31372
>dbj|AP006851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa183H18 Length = 38313 Score = 121 bits (61), Expect = 3e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 187 aggagagaggatacttccctacaacttgcacattttaggaagcataaaaggaaagaacta 246 |||||||||||||||| || |||||||| |||||||||| |||||||||||||| ||| Sbjct: 36859 aggagagaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactg 36918 Query: 247 aagaaaacacaaggaaaaagcgttgttaataacgtgcacaagcctattgaacacaatcca 306 |||||||||| |||||| ||||| ||||||||||||||||| | |||||| |||||| Sbjct: 36919 aagaaaacacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatcca 36978 Query: 307 ctcggaaaggatg 319 | |||||||||| Sbjct: 36979 cctggaaaggatg 36991 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 55 gatgcttctgcgatgataccacaacataattacaagcttgatgttcattcccttaataac 114 |||||||| | | ||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct: 36107 gatgcttcagtgctgataccacaacacaattacaagcttgatgcccatgcccttaatagt 36166 Query: 115 cgtcatcctggt 126 |||||||||||| Sbjct: 36167 cgtcatcctggt 36178 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 132 cgaatgccggcaattcagagaatcaattcttggcgtcatgcctcaccattggg 184 |||||| ||| |||| ||||||||| ||||||| ||||||||||| ||||||| Sbjct: 36711 cgaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattggg 36763
>ref|NM_114965.2| Arabidopsis thaliana unknown protein AT3G51050 mRNA, complete cds Length = 2449 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 434 tttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggctattcatc 493 ||||||||||||| ||||||||||| || ||| |||||||||| || || ||||||||| Sbjct: 1263 tttggtgggttcctaatgttgttgtggctcatcaaaaggaaggaattgaagctattcatt 1322 Query: 494 tagcttctggacgtacgctttgcaagctt 522 | || |||| || || |||||||||||| Sbjct: 1323 tgcctactggtcgaacactttgcaagctt 1351 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| ||||||||||||||||| ||| | || |||| |||||| || || |||| Sbjct: 905 ccacaacacaattacaagcttgatgtgcatgctctaaatagccgtcacccaggagagttt 964 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcc 173 || ||| || |||| ||||||||||||||| | |||||||| Sbjct: 965 gagtgcagggaatttagagaatcaattcttagtgtcatgcc 1005
>gb|AF462847.1|AF462847 Arabidopsis thaliana AT3g51050/F24M12_90 mRNA, complete cds Length = 2449 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 434 tttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggctattcatc 493 ||||||||||||| ||||||||||| || ||| |||||||||| || || ||||||||| Sbjct: 1263 tttggtgggttcctaatgttgttgtggctcatcaaaaggaaggaattgaagctattcatt 1322 Query: 494 tagcttctggacgtacgctttgcaagctt 522 | || |||| || || |||||||||||| Sbjct: 1323 tgcctactggtcgaacactttgcaagctt 1351 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| ||||||||||||||||| ||| | || |||| |||||| || || |||| Sbjct: 905 ccacaacacaattacaagcttgatgtgcatgctctaaatagccgtcacccaggagagttt 964 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcc 173 || ||| || |||| ||||||||||||||| | |||||||| Sbjct: 965 gagtgcagggaatttagagaatcaattcttagtgtcatgcc 1005
>emb|BX823745.1|CNS0A7CN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2437 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 434 tttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggctattcatc 493 ||||||||||||| ||||||||||| || ||| |||||||||| || || ||||||||| Sbjct: 1241 tttggtgggttcctaatgttgttgtggctcatcaaaaggaaggaattgaagctattcatt 1300 Query: 494 tagcttctggacgtacgctttgcaagctt 522 | || |||| || || |||||||||||| Sbjct: 1301 tgcctactggtcgaacactttgcaagctt 1329 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| ||||||||||||||||| ||| | || |||| |||||| || || |||| Sbjct: 883 ccacaacacaattacaagcttgatgtgcatgctctaaatagccgtcacccaggagagttt 942 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcc 173 || ||| || |||| ||||||||||||||| | |||||||| Sbjct: 943 gagtgcagggaatttagagaatcaattcttagtgtcatgcc 983
>gb|BT001131.1| Arabidopsis thaliana At3g51050/F24M12_90 mRNA, complete cds Length = 2097 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 434 tttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggctattcatc 493 ||||||||||||| ||||||||||| || ||| |||||||||| || || ||||||||| Sbjct: 1169 tttggtgggttcctaatgttgttgtggctcatcaaaaggaaggaattgaagctattcatt 1228 Query: 494 tagcttctggacgtacgctttgcaagctt 522 | || |||| || || |||||||||||| Sbjct: 1229 tgcctactggtcgaacactttgcaagctt 1257 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtcatcctggtgagtac 132 |||||||| ||||||||||||||||| ||| | || |||| |||||| || || |||| Sbjct: 811 ccacaacacaattacaagcttgatgtgcatgctctaaatagccgtcacccaggagagttt 870 Query: 133 gaatgccggcaattcagagaatcaattcttggcgtcatgcc 173 || ||| || |||| ||||||||||||||| | |||||||| Sbjct: 871 gagtgcagggaatttagagaatcaattcttagtgtcatgcc 911
>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12 Length = 129516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 434 tttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggctattcat 492 ||||||||||||| ||||||||||| || ||| |||||||||| || || ||||||||| Sbjct: 15809 tttggtgggttcctaatgttgttgtggctcatcaaaaggaaggaattgaagctattcat 15867 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 73 ccacaacataattacaagcttgatgttcattcccttaataaccgtca 119 |||||||| ||||||||||||||||| ||| | || |||| |||||| Sbjct: 15168 ccacaacacaattacaagcttgatgtgcatgctctaaatagccgtca 15214
>emb|CR955005.2| Medicago truncatula chromosome 5 clone mte1-58c24, COMPLETE SEQUENCE Length = 106497 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 544 catgcagatattaatggagatggagttctagatcatgttcaggtt 588 ||||| ||||||||||| ||||||||||| |||||||| |||||| Sbjct: 38512 catgctgatattaatggtgatggagttctggatcatgtgcaggtt 38556 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 582 tcaggttgtcggtggaaatggtgctgagcaaactgttgttagcgggtc 629 ||||| ||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 38677 tcaggctgttggaggaaatggtgctgagcaaactgtagttagtgggtc 38724 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 424 tatactcaagtttggtgggttcccaatgttgttgttgcacatgaaaaggaagggataga 482 |||||| | |||||||||||||| ||||||||||| || ||| |||||| |||||||| Sbjct: 38188 tatactaaggtttggtgggttcctaatgttgttgtggctcatctaaaggaggggataga 38246
>dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17E09, TM0627, complete sequence Length = 101220 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 550 gatattaatggagatggagttctagatcatgttcaggtt 588 |||||||| || |||||||||||||||||||| |||||| Sbjct: 22648 gatattaacggtgatggagttctagatcatgtgcaggtt 22610 Score = 42.1 bits (21), Expect = 2.2 Identities = 63/77 (81%) Strand = Plus / Minus Query: 427 actcaagtttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggct 486 ||||| ||||||||||| || ||||||||||| || ||| ||||| |||||||| || Sbjct: 23118 actcaggtttggtgggtccctaatgttgttgtggctcatctgaaggaggggatagaagcc 23059 Query: 487 attcatctagcttctgg 503 ||||||| || ||||| Sbjct: 23058 cttcatctggcatctgg 23042 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 582 tcaggttgtcggtggaaatggtgctgagcaaactgttgttagcgggtc 629 ||||| ||| || |||||||||||||| || ||||| ||||| ||||| Sbjct: 22530 tcaggctgttggaggaaatggtgctgaacagactgtagttagtgggtc 22483
>dbj|AP006643.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT34A19, TM0249, complete sequence Length = 111706 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 550 gatattaatggagatggagttctagatcatgttcaggtt 588 |||||||| || |||||||||||||||||||| |||||| Sbjct: 12535 gatattaacggtgatggagttctagatcatgtgcaggtt 12573 Score = 42.1 bits (21), Expect = 2.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 427 actcaagtttggtgggttcccaatgttgttgttgcacatgaaaaggaagggatagaggct 486 ||||| ||||||||||| || ||||||||||| || ||| ||||| |||||||| || Sbjct: 12065 actcaggtttggtgggtccctaatgttgttgtggctcatctgaaggaggggatagaagcc 12124 Query: 487 attcatctagcttctgg 503 ||||||| || ||||| Sbjct: 12125 cttcatctggcatctgg 12141 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 582 tcaggttgtcggtggaaatggtgctgagcaaactgttgttagcgggtc 629 ||||| ||| || |||||||||||||| || ||||| ||||| ||||| Sbjct: 12653 tcaggctgttggaggaaatggtgctgaacagactgtagttagtgggtc 12700
>emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on chromosome 13 Contains part of a novel gene (KIAA0916), complete sequence Length = 124964 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 456 tgttgcacatgaaaaggaagggatagagg 484 |||||||||||||||||||||| |||||| Sbjct: 59803 tgttgcacatgaaaaggaaggggtagagg 59775
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence Length = 202155 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 462 acatgaaaaggaagggatagagg 484 ||||||||||||||||||||||| Sbjct: 151533 acatgaaaaggaagggatagagg 151555
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 450 tgttgttgttgcacatgaaaaggaag 475 ||||||||||||| |||||||||||| Sbjct: 67694 tgttgttgttgcaaatgaaaaggaag 67669
>gb|AC102483.8| Mus musculus chromosome 1, clone RP24-450F12, complete sequence Length = 167656 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 taaagaaaacacaaggaaaaa 265 ||||||||||||||||||||| Sbjct: 98868 taaagaaaacacaaggaaaaa 98848
>gb|AC167222.4| Mus musculus 10 BAC RP23-261G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198762 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 aaaaggaaagaactaaagaaaacac 256 |||||||||||||| |||||||||| Sbjct: 16972 aaaaggaaagaactcaagaaaacac 16996
>gb|AC127525.8| Homo sapiens chromosome 17, clone RP13-551H18, complete sequence Length = 108860 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 acaacataattacaagcttga 95 ||||||||||||||||||||| Sbjct: 222 acaacataattacaagcttga 202
>gb|AC098889.3| Mus musculus BAC clone RP23-122O10 from 10, complete sequence Length = 204770 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 ggaaatggtgctgagcaaact 615 ||||||||||||||||||||| Sbjct: 78752 ggaaatggtgctgagcaaact 78732
>ref|XM_721969.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06412) partial mRNA Length = 2025 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 atgcagatattaatggagatg 565 ||||||||||||||||||||| Sbjct: 1697 atgcagatattaatggagatg 1717
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 tgcagatattaatggagatgg 566 ||||||||||||||||||||| Sbjct: 3954114 tgcagatattaatggagatgg 3954094
>emb|AL136220.14| Human DNA sequence from clone RP11-14O22 on chromosome 13q12.3-13.3 Contains a novel gene, complete sequence Length = 155084 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 aagaaaacacaaggaaaaagc 267 ||||||||||||||||||||| Sbjct: 53524 aagaaaacacaaggaaaaagc 53504
>gb|AC134407.6| Homo sapiens chromosome 17, clone RP11-855A2, complete sequence Length = 199875 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 acaacataattacaagcttga 95 ||||||||||||||||||||| Sbjct: 139230 acaacataattacaagcttga 139250
>emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 in linkage group 17, complete sequence Length = 153573 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gaactaaagaaaacacaagga 261 ||||||||||||||||||||| Sbjct: 151263 gaactaaagaaaacacaagga 151243
>gb|AC158597.7| Mus musculus 10 BAC RP24-216E13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167526 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 ggaaatggtgctgagcaaact 615 ||||||||||||||||||||| Sbjct: 5546 ggaaatggtgctgagcaaact 5566
>gb|AC026371.9|AC026371 Homo sapiens 12 BAC RP11-59L15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152951 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 456 tgttgcacatgaaaaggaagggatagagg 484 |||||||| ||||||||||||| |||||| Sbjct: 143391 tgttgcacgtgaaaaggaaggggtagagg 143363
>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the complete sequence Length = 350029 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 aaaaggaaagaactaaagaaaacac 256 |||||||||||||| |||||||||| Sbjct: 174307 aaaaggaaagaactcaagaaaacac 174283
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184707 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 aaaaggaaagaactaaagaaaacac 256 |||||||||||||| |||||||||| Sbjct: 153597 aaaaggaaagaactcaagaaaacac 153621
>gb|U73107.1|MMU73107 Mus musculus adenosine deaminase (ADA) gene, complete cds Length = 29807 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gaaaaggaagggatagaggct 486 ||||||||||||||||||||| Sbjct: 4949 gaaaaggaagggatagaggct 4969
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 tggaaatggtgctgagcaaac 614 ||||||||||||||||||||| Sbjct: 1735612 tggaaatggtgctgagcaaac 1735592
>gb|M34242.1|MUSADAM01 Mouse adenosine deaminase (ADA) gene, exon 1 Length = 2128 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gaaaaggaagggatagaggct 486 ||||||||||||||||||||| Sbjct: 1539 gaaaaggaagggatagaggct 1559
>emb|AL591490.12| Mouse DNA sequence from clone RP23-144O20 on chromosome 2, complete sequence Length = 192082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 gaaaaggaagggatagaggct 486 ||||||||||||||||||||| Sbjct: 124393 gaaaaggaagggatagaggct 124373
>emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chromosome X, complete sequence Length = 197111 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactgt 617 ||||||||||||||||||||| Sbjct: 104500 aaatggtgctgagcaaactgt 104520
>ref|NM_122594.2| Arabidopsis thaliana DNA binding AT5G27120 mRNA, complete cds Length = 1856 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctggctcagctaaaggcaaa 384 |||||||||||||||||||| Sbjct: 1281 ctggctcagctaaaggcaaa 1300
>gb|AC170875.2| Mus musculus BAC clone RP24-266D3 from chromosome 3, complete sequence Length = 155248 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 tctctgcacacactttatat 407 |||||||||||||||||||| Sbjct: 94001 tctctgcacacactttatat 93982
>gb|AC161220.5| Mus musculus chromosome 5, clone RP23-9G1, complete sequence Length = 205791 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ttctagatcatgttcaggtt 588 |||||||||||||||||||| Sbjct: 201073 ttctagatcatgttcaggtt 201092
>gb|BC021807.1| Mus musculus exosome component 2, mRNA (cDNA clone MGC:30456 IMAGE:3980155), complete cds Length = 1657 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 1284 aacttgcacattttaggaag 1265
>gb|BC021485.1| Mus musculus exosome component 2, mRNA (cDNA clone MGC:36427 IMAGE:5344620), complete cds Length = 1659 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 1286 aacttgcacattttaggaag 1267
>ref|NM_144886.1| Mus musculus exosome component 2 (Exosc2), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 1286 aacttgcacattttaggaag 1267
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 taaagaaaacacaaggaaaa 264 |||||||||||||||||||| Sbjct: 6353652 taaagaaaacacaaggaaaa 6353671
>gb|AC036145.11| Mus musculus chromosome 5, clone RP23-439C22, complete sequence Length = 182228 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 ttctagatcatgttcaggtt 588 |||||||||||||||||||| Sbjct: 104871 ttctagatcatgttcaggtt 104890
>gb|AC124704.4| Mus musculus BAC clone RP23-480H24 from chromosome 6, complete sequence Length = 185099 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 actaaagaaaacacaaggaa 262 |||||||||||||||||||| Sbjct: 153281 actaaagaaaacacaaggaa 153262
>gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosome 10, complete sequence Length = 211025 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 tgttgttgcacatgaaaagg 472 |||||||||||||||||||| Sbjct: 158391 tgttgttgcacatgaaaagg 158410
>gb|AC102031.7| Mus musculus chromosome 3, clone RP23-14C8, complete sequence Length = 181179 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 tctctgcacacactttatat 407 |||||||||||||||||||| Sbjct: 171637 tctctgcacacactttatat 171656
>gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosome 10, complete sequence Length = 175812 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ataaaaggaaagaactaaagaaaa 253 |||||||||||||| ||||||||| Sbjct: 127496 ataaaaggaaagaattaaagaaaa 127519
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete sequence Length = 178963 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 238 aaagaact-aaagaaaacacaaggaaaa 264 |||||||| ||||||||||||||||||| Sbjct: 97371 aaagaactcaaagaaaacacaaggaaaa 97344
>emb|AL109913.20|HSA183K14 Human DNA sequence from clone RP11-183K14 on chromosome Xq26.3-27.3 Contains an ADP-ribosylation factor-like 5 (ARL5) pseudogene and an ELL gene (11-19 lysine-rich leukemia gene) (ELL) pseudogene, complete sequence Length = 144134 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aattcagagaatcaattctt 162 |||||||||||||||||||| Sbjct: 970 aattcagagaatcaattctt 951
>gb|AY096684.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1633 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctggctcagctaaaggcaaa 384 |||||||||||||||||||| Sbjct: 1214 ctggctcagctaaaggcaaa 1233
>gb|AY074281.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1856 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctggctcagctaaaggcaaa 384 |||||||||||||||||||| Sbjct: 1281 ctggctcagctaaaggcaaa 1300
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 taaagaaaacacaaggaaaa 264 |||||||||||||||||||| Sbjct: 33778 taaagaaaacacaaggaaaa 33797
>emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BAC clone B9J10 Length = 66924 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aagaaaacacaaggaaaaag 266 |||||||||||||||||||| Sbjct: 14492 aagaaaacacaaggaaaaag 14473
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a nove gene, a ribosomal protein large p1 (Rplp1) pseudogene and the Cmah gene for CMP-N-Acetylneuraminic acid hydroxylase, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 aaaaggaaagaactaaagaaaaca 255 |||||||||||||||||| ||||| Sbjct: 84018 aaaaggaaagaactaaaggaaaca 83995
>emb|BX530073.9| Zebrafish DNA sequence from clone CH211-201D22 in linkage group 21, complete sequence Length = 47127 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 aaaggatgatactaacagaa 331 |||||||||||||||||||| Sbjct: 30456 aaaggatgatactaacagaa 30437
>gb|U02240.1|MGU02240 Mycoplasma genitalium random genomic clone xd6 Length = 348 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaaagaactaaagaaaa 253 |||||||||||||||||||| Sbjct: 146 aaggaaagaactaaagaaaa 165
>gb|AC107222.6| Homo sapiens BAC clone RP11-616K6 from 4, complete sequence Length = 111550 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 aaggaaagaactaaagaaaacaca 257 ||||||| |||||||||||||||| Sbjct: 24511 aaggaaaaaactaaagaaaacaca 24488
>emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in linkage group 10, complete sequence Length = 255306 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 acttgcacattttaggaagc 229 |||||||||||||||||||| Sbjct: 217087 acttgcacattttaggaagc 217106
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 aagctgcagatctggctggctcag 373 ||||||||| |||||||||||||| Sbjct: 86204 aagctgcaggtctggctggctcag 86181
>dbj|AK144234.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:G430139N02 product:exosome component 2, full insert sequence Length = 1676 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 1271 aacttgcacattttaggaag 1252
>gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, complete sequence Length = 174550 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 2092 aaatggtgctgagcaaactg 2073
>dbj|AK164618.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430039J21 product:exosome component 2, full insert sequence Length = 2077 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 2044 aacttgcacattttaggaag 2025
>dbj|AK166881.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0020F10 product:exosome component 2, full insert sequence Length = 1630 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 1272 aacttgcacattttaggaag 1253
>gb|AC151832.3| Mus musculus BAC clone RP24-68M1 from chromosome 10, complete sequence Length = 222815 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 tgttgttgcacatgaaaagg 472 |||||||||||||||||||| Sbjct: 37252 tgttgttgcacatgaaaagg 37271
>dbj|AK081383.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130012M18 product:unclassifiable, full insert sequence Length = 1306 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ggaaagaactaaagaaaaca 255 |||||||||||||||||||| Sbjct: 157 ggaaagaactaaagaaaaca 176
>gb|AC153818.5| Mus musculus 6 BAC RP23-345F4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193079 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 232 aaaaggaaagaactaaagaaaacacaag 259 ||||||||||||| |||||||||||||| Sbjct: 5785 aaaaggaaagaac-aaagaaaacacaag 5759
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 taaagaaaacacaaggaaaa 264 |||||||||||||||||||| Sbjct: 6352865 taaagaaaacacaaggaaaa 6352884
>gb|AC064836.7| Homo sapiens BAC clone RP11-686O6 from 2, complete sequence Length = 154754 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tgcacatgaaaaggaaggga 478 |||||||||||||||||||| Sbjct: 134873 tgcacatgaaaaggaaggga 134892
>gb|AF302490.1|AF302490 Arabidopsis thaliana NOP58-like protein F108 mRNA, complete cds Length = 1781 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctggctcagctaaaggcaaa 384 |||||||||||||||||||| Sbjct: 1214 ctggctcagctaaaggcaaa 1233
>gb|AC017004.4| Homo sapiens BAC clone RP11-88C6 from 2, complete sequence Length = 184850 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 109890 aaatggtgctgagcaaactg 109909
>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 227305 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 tccaggcacaacctcagatgcttc 62 ||||||||||| |||||||||||| Sbjct: 203208 tccaggcacaatctcagatgcttc 203185
>gb|AC137494.1| Homo sapiens chromosome 16 clone LA16c-491E3, complete sequence Length = 37190 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 29494 aaatggtgctgagcaaactg 29513
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 54441 aaatggtgctgagcaaactg 54460
>emb|AL954822.8| Zebrafish DNA sequence from clone CH211-222M15 in linkage group 15, complete sequence Length = 219495 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ataccacaacataattacaa 89 |||||||||||||||||||| Sbjct: 63150 ataccacaacataattacaa 63169
>gb|BT002060.1| Arabidopsis thaliana SAR DNA-binding protein - like (At5g27120) mRNA, partial cds Length = 1351 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ctggctcagctaaaggcaaa 384 |||||||||||||||||||| Sbjct: 1296 ctggctcagctaaaggcaaa 1315
>emb|CT574570.2| Pan troglodytes chromosome X clone CH251-19I14 map Xq28, complete sequence Length = 173906 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aattcagagaatcaattctt 162 |||||||||||||||||||| Sbjct: 37022 aattcagagaatcaattctt 37003
>gb|L43967.2| Mycoplasma genitalium G37, complete genome Length = 580076 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaaagaactaaagaaaa 253 |||||||||||||||||||| Sbjct: 64237 aaggaaagaactaaagaaaa 64218
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 151567 aaatggtgctgagcaaactg 151586
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence Length = 191903 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aggaagcataaaaggaaaga 242 |||||||||||||||||||| Sbjct: 50367 aggaagcataaaaggaaaga 50348
>gb|DQ306063.1| Danio rerio odorant receptor (OR128-6) gene, complete cds Length = 918 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ataccacaacataattacaa 89 |||||||||||||||||||| Sbjct: 378 ataccacaacataattacaa 397
>gb|AC155729.3| Mus musculus 6 BAC RP24-173B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198782 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 232 aaaaggaaagaactaaagaaaacacaag 259 ||||||||||||| |||||||||||||| Sbjct: 83417 aaaaggaaagaac-aaagaaaacacaag 83443
>emb|AL929275.8| Mouse DNA sequence from clone RP23-65P13 on chromosome 2, complete sequence Length = 197356 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aacttgcacattttaggaag 228 |||||||||||||||||||| Sbjct: 19874 aacttgcacattttaggaag 19855
>gb|AF007271.1|TM021B04 Arabidopsis thaliana BAC TM021B04 Length = 90019 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctggctcagctaaaggcaaa 384 |||||||||||||||||||| Sbjct: 79129 ctggctcagctaaaggcaaa 79110
>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete sequence Length = 126358 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ggaaagaactaaagaaaaca 255 |||||||||||||||||||| Sbjct: 37443 ggaaagaactaaagaaaaca 37462
>emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chromosome 3, complete sequence Length = 186605 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aggaagcataaaaggaaaga 242 |||||||||||||||||||| Sbjct: 165492 aggaagcataaaaggaaaga 165473
>dbj|AP000220.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone:B2291C14, complete sequence Length = 61209 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 11863 aaatggtgctgagcaaactg 11882
>dbj|AP000136.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone B2291C14-R44F3, segment 1/10, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 11863 aaatggtgctgagcaaactg 11882
>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete sequence Length = 100090 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ggaaagaactaaagaaaaca 255 |||||||||||||||||||| Sbjct: 74934 ggaaagaactaaagaaaaca 74915
>dbj|AP000084.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533 region, segment 1/7 Length = 100000 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aaatggtgctgagcaaactg 616 |||||||||||||||||||| Sbjct: 11863 aaatggtgctgagcaaactg 11882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,735,610 Number of Sequences: 3902068 Number of extensions: 6735610 Number of successful extensions: 120335 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 119960 Number of HSP's gapped (non-prelim): 377 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)