ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32o24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 573 e-160
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 573 e-160
3emb|AJ544688.1|OSA544688 Oryza sativa (japonica cultivar-group) ... 573 e-160
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 573 e-160
5emb|AJ439082.1|OSA439082 Oryza sativa partial mRNA for phosphati... 498 e-137
6gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 359 7e-96
7dbj|AK065869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
8emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018 46 0.14
9gb|AC106806.2| Homo sapiens chromosome 5 clone RP11-510I6, compl... 46 0.14
10gb|AC034219.5| Homo sapiens chromosome 5 clone CTD-2028K10, comp... 46 0.14
11dbj|BS000043.1| Pan troglodytes chromosome 22 clone:RP43-169N06,... 46 0.14
12emb|AL109763.2|HSP10238 Homo sapiens chromosome 21 sequence from... 46 0.14
13gb|AC018814.6| Homo sapiens chromosome 3 clone RP11-204C23 map 3... 46 0.14
14gb|AC115789.9| Mus musculus chromosome 18, clone RP23-398N2, com... 44 0.57
15gb|AC103710.2| Homo sapiens chromosome 11, clone CTD-2379P15, co... 44 0.57
16gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, comp... 44 0.57
17gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, co... 44 0.57
18gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 8.8
19gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8... 40 8.8
20ref|XM_819274.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 hy... 40 8.8
21ref|XM_803335.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.8
22ref|XM_814173.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.8
23gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome... 40 8.8
24ref|XM_947888.1| Theileria annulata strain Ankara hypothetical p... 40 8.8
25gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete s... 40 8.8
26gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete s... 40 8.8
27gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, comp... 40 8.8
28dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 8.8
29gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, com... 40 8.8
30gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, compl... 40 8.8
31dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
32gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180... 40 8.8
33gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Can... 40 8.8
34dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
35gb|AC171733.1| Lycopersicon esculentum chromosome 11 clone C11HB... 40 8.8

>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score =  573 bits (289), Expect = e-160
 Identities = 549/633 (86%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                         
Query: 6     gtggccctcaggcgcatcctatgagggcgacttccgtggaggttt-atcgacggaacagg 64
             |||||| || || ||||||||||| || ||||||||||||||||| || || ||| ||||
Sbjct: 21959 gtggccttctggtgcatcctatgaaggtgacttccgtggaggtttcattgatggagcagg 22018

                                                                         
Query: 65    cactttcaagggggtcgacggctcggtttacaaaggttcttggaggatgaacaaaaagca 124
             |||||||||||| || || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 22019 cactttcaagggagttgatggctcagtttacaaaggttcttggaggatgaacaagaagca 22078

                                                                         
Query: 125   gggaatggggacaatggtttactcaaactctgacagttatgaaggtctgtggaacgaggg 184
              || |||||||||||||||||||| ||||| |||| |||||||||| | ||||| || ||
Sbjct: 22079 tggtatggggacaatggtttactctaactccgacacttatgaaggtttctggaatgaagg 22138

                                                                         
Query: 185   tttgccggatggatatggtaaatatacatgggctgctggcaacatctacattggtagctg 244
             ||| || |||| || ||||||||| |||||||||| ||||||| | |||||||| || ||
Sbjct: 22139 tttacctgatgaatttggtaaatacacatgggctgatggcaacgtatacattggaagatg 22198

                                                                         
Query: 245   gaagtcaggtagcatgaacggccgaggcgtaatgcagtgggtaaatggtgatactcttga 304
             ||| ||||| |  ||||| ||| | || |||||||||||| |||||||||||||||||||
Sbjct: 22199 gaaatcaggcaaaatgaatggcagcggggtaatgcagtggataaatggtgatactcttga 22258

                                                                         
Query: 305   ctgtaattggctcaatgggctggctcatggcaaaggttactgcaaatatgcgtcaggggc 364
             |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 22259 ctgtaattggctcaatggcctggctcatggcaaaggttactgcaaatatgcatctggggc 22318

                                                                         
Query: 365   atgttacattggtacgtgggataggggagtcaaggatggccatggcatattttatcaacc 424
              || ||||||||||| |||||||| ||| | |||||||||||||| | ||||||||||||
Sbjct: 22319 ttgctacattggtacatgggatagaggactaaaggatggccatggtacattttatcaacc 22378

                                                                         
Query: 425   aggaagtaaaataccttgtaaccttgaagtttctgagtgtgcaacaaataatgatggtac 484
              ||||| ||||| ||||||||||||||||||||||| |||  ||||| | ||||||||||
Sbjct: 22379 tggaagcaaaattccttgtaaccttgaagtttctgactgtctaacaagtcatgatggtac 22438

                                                                         
Query: 485   aagtgcttcaagttctagtaatgaaaaggtcaaagttggacctgttgtttctattgcaaa 544
             |||||||||||||||||||||||||||| |||   ||||| ||||| |||||||||||||
Sbjct: 22439 aagtgcttcaagttctagtaatgaaaagatcactattgga-ctgttatttctattgcaaa 22497

                                                                         
Query: 545   atctgtgcaacaaatggggtctacgtaggttttttcatcgtcccaggcgcatttcaaatg 604
             | |||||||| || ||| |  | ||||||||| ||||||| ||||| || ||||||||||
Sbjct: 22498 aactgtgcaagaattggaggttgcgtaggtttcttcatcggcccagacgtatttcaaatg 22557

                                              
Query: 605   gcacaacaccaatttttgttgatgattctggaa 637
             | || |||||| |||| | |||| |||||||||
Sbjct: 22558 gtaccacaccagttttcgatgataattctggaa 22590



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  573 bits (289), Expect = e-160
 Identities = 549/633 (86%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                            
Query: 6        gtggccctcaggcgcatcctatgagggcgacttccgtggaggttt-atcgacggaacagg 64
                |||||| || || ||||||||||| || ||||||||||||||||| || || ||| ||||
Sbjct: 27889797 gtggccttctggtgcatcctatgaaggtgacttccgtggaggtttcattgatggagcagg 27889856

                                                                            
Query: 65       cactttcaagggggtcgacggctcggtttacaaaggttcttggaggatgaacaaaaagca 124
                |||||||||||| || || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 27889857 cactttcaagggagttgatggctcagtttacaaaggttcttggaggatgaacaagaagca 27889916

                                                                            
Query: 125      gggaatggggacaatggtttactcaaactctgacagttatgaaggtctgtggaacgaggg 184
                 || |||||||||||||||||||| ||||| |||| |||||||||| | ||||| || ||
Sbjct: 27889917 tggtatggggacaatggtttactctaactccgacacttatgaaggtttctggaatgaagg 27889976

                                                                            
Query: 185      tttgccggatggatatggtaaatatacatgggctgctggcaacatctacattggtagctg 244
                ||| || |||| || ||||||||| |||||||||| ||||||| | |||||||| || ||
Sbjct: 27889977 tttacctgatgaatttggtaaatacacatgggctgatggcaacgtatacattggaagatg 27890036

                                                                            
Query: 245      gaagtcaggtagcatgaacggccgaggcgtaatgcagtgggtaaatggtgatactcttga 304
                ||| ||||| |  ||||| ||| | || |||||||||||| |||||||||||||||||||
Sbjct: 27890037 gaaatcaggcaaaatgaatggcagcggggtaatgcagtggataaatggtgatactcttga 27890096

                                                                            
Query: 305      ctgtaattggctcaatgggctggctcatggcaaaggttactgcaaatatgcgtcaggggc 364
                |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 27890097 ctgtaattggctcaatggcctggctcatggcaaaggttactgcaaatatgcatctggggc 27890156

                                                                            
Query: 365      atgttacattggtacgtgggataggggagtcaaggatggccatggcatattttatcaacc 424
                 || ||||||||||| |||||||| ||| | |||||||||||||| | ||||||||||||
Sbjct: 27890157 ttgctacattggtacatgggatagaggactaaaggatggccatggtacattttatcaacc 27890216

                                                                            
Query: 425      aggaagtaaaataccttgtaaccttgaagtttctgagtgtgcaacaaataatgatggtac 484
                 ||||| ||||| ||||||||||||||||||||||| |||  ||||| | ||||||||||
Sbjct: 27890217 tggaagcaaaattccttgtaaccttgaagtttctgactgtctaacaagtcatgatggtac 27890276

                                                                            
Query: 485      aagtgcttcaagttctagtaatgaaaaggtcaaagttggacctgttgtttctattgcaaa 544
                |||||||||||||||||||||||||||| |||   ||||| ||||| |||||||||||||
Sbjct: 27890277 aagtgcttcaagttctagtaatgaaaagatcactattgga-ctgttatttctattgcaaa 27890335

                                                                            
Query: 545      atctgtgcaacaaatggggtctacgtaggttttttcatcgtcccaggcgcatttcaaatg 604
                | |||||||| || ||| |  | ||||||||| ||||||| ||||| || ||||||||||
Sbjct: 27890336 aactgtgcaagaattggaggttgcgtaggtttcttcatcggcccagacgtatttcaaatg 27890395

                                                 
Query: 605      gcacaacaccaatttttgttgatgattctggaa 637
                | || |||||| |||| | |||| |||||||||
Sbjct: 27890396 gtaccacaccagttttcgatgataattctggaa 27890428



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>emb|AJ544688.1|OSA544688 Oryza sativa (japonica cultivar-group) mRNA for
           phosphatidylinositol 4-phosphate 5-kinase (pipk1 gene)
          Length = 2438

 Score =  573 bits (289), Expect = e-160
 Identities = 549/633 (86%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gtggccctcaggcgcatcctatgagggcgacttccgtggaggttt-atcgacggaacagg 64
           |||||| || || ||||||||||| || ||||||||||||||||| || || ||| ||||
Sbjct: 240 gtggccttctggtgcatcctatgaaggtgacttccgtggaggtttcattgatggagcagg 299

                                                                       
Query: 65  cactttcaagggggtcgacggctcggtttacaaaggttcttggaggatgaacaaaaagca 124
           |||||||||||| || || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 300 cactttcaagggagttgatggctcagtttacaaaggttcttggaggatgaacaagaagca 359

                                                                       
Query: 125 gggaatggggacaatggtttactcaaactctgacagttatgaaggtctgtggaacgaggg 184
            || |||||||||||||||||||| ||||| |||| |||||||||| | ||||| || ||
Sbjct: 360 tggtatggggacaatggtttactctaactccgacacttatgaaggtttctggaatgaagg 419

                                                                       
Query: 185 tttgccggatggatatggtaaatatacatgggctgctggcaacatctacattggtagctg 244
           ||| || |||| || ||||||||| |||||||||| ||||||| | |||||||| || ||
Sbjct: 420 tttacctgatgaatttggtaaatacacatgggctgatggcaacgtatacattggaagatg 479

                                                                       
Query: 245 gaagtcaggtagcatgaacggccgaggcgtaatgcagtgggtaaatggtgatactcttga 304
           ||| ||||| |  ||||| ||| | || |||||||||||| |||||||||||||||||||
Sbjct: 480 gaaatcaggcaaaatgaatggcagcggggtaatgcagtggataaatggtgatactcttga 539

                                                                       
Query: 305 ctgtaattggctcaatgggctggctcatggcaaaggttactgcaaatatgcgtcaggggc 364
           |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 540 ctgtaattggctcaatggcctggctcatggcaaaggttactgcaaatatgcatctggggc 599

                                                                       
Query: 365 atgttacattggtacgtgggataggggagtcaaggatggccatggcatattttatcaacc 424
            || ||||||||||| |||||||| ||| | |||||||||||||| | ||||||||||||
Sbjct: 600 ttgctacattggtacatgggatagaggactaaaggatggccatggtacattttatcaacc 659

                                                                       
Query: 425 aggaagtaaaataccttgtaaccttgaagtttctgagtgtgcaacaaataatgatggtac 484
            ||||| ||||| ||||||||||||||||||||||| |||  ||||| | ||||||||||
Sbjct: 660 tggaagcaaaattccttgtaaccttgaagtttctgactgtctaacaagtcatgatggtac 719

                                                                       
Query: 485 aagtgcttcaagttctagtaatgaaaaggtcaaagttggacctgttgtttctattgcaaa 544
           |||||||||||||||||||||||||||| |||   ||||| ||||| |||||||||||||
Sbjct: 720 aagtgcttcaagttctagtaatgaaaagatcactattgga-ctgttatttctattgcaaa 778

                                                                       
Query: 545 atctgtgcaacaaatggggtctacgtaggttttttcatcgtcccaggcgcatttcaaatg 604
           | |||||||| || ||| |  | ||||||||| ||||||| ||||| || ||||||||||
Sbjct: 779 aactgtgcaagaattggaggttgcgtaggtttcttcatcggcccagacgtatttcaaatg 838

                                            
Query: 605 gcacaacaccaatttttgttgatgattctggaa 637
           | || |||||| |||| | |||| |||||||||
Sbjct: 839 gtaccacaccagttttcgatgataattctggaa 871



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  573 bits (289), Expect = e-160
 Identities = 549/633 (86%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                            
Query: 6        gtggccctcaggcgcatcctatgagggcgacttccgtggaggttt-atcgacggaacagg 64
                |||||| || || ||||||||||| || ||||||||||||||||| || || ||| ||||
Sbjct: 27981121 gtggccttctggtgcatcctatgaaggtgacttccgtggaggtttcattgatggagcagg 27981180

                                                                            
Query: 65       cactttcaagggggtcgacggctcggtttacaaaggttcttggaggatgaacaaaaagca 124
                |||||||||||| || || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 27981181 cactttcaagggagttgatggctcagtttacaaaggttcttggaggatgaacaagaagca 27981240

                                                                            
Query: 125      gggaatggggacaatggtttactcaaactctgacagttatgaaggtctgtggaacgaggg 184
                 || |||||||||||||||||||| ||||| |||| |||||||||| | ||||| || ||
Sbjct: 27981241 tggtatggggacaatggtttactctaactccgacacttatgaaggtttctggaatgaagg 27981300

                                                                            
Query: 185      tttgccggatggatatggtaaatatacatgggctgctggcaacatctacattggtagctg 244
                ||| || |||| || ||||||||| |||||||||| ||||||| | |||||||| || ||
Sbjct: 27981301 tttacctgatgaatttggtaaatacacatgggctgatggcaacgtatacattggaagatg 27981360

                                                                            
Query: 245      gaagtcaggtagcatgaacggccgaggcgtaatgcagtgggtaaatggtgatactcttga 304
                ||| ||||| |  ||||| ||| | || |||||||||||| |||||||||||||||||||
Sbjct: 27981361 gaaatcaggcaaaatgaatggcagcggggtaatgcagtggataaatggtgatactcttga 27981420

                                                                            
Query: 305      ctgtaattggctcaatgggctggctcatggcaaaggttactgcaaatatgcgtcaggggc 364
                |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct: 27981421 ctgtaattggctcaatggcctggctcatggcaaaggttactgcaaatatgcatctggggc 27981480

                                                                            
Query: 365      atgttacattggtacgtgggataggggagtcaaggatggccatggcatattttatcaacc 424
                 || ||||||||||| |||||||| ||| | |||||||||||||| | ||||||||||||
Sbjct: 27981481 ttgctacattggtacatgggatagaggactaaaggatggccatggtacattttatcaacc 27981540

                                                                            
Query: 425      aggaagtaaaataccttgtaaccttgaagtttctgagtgtgcaacaaataatgatggtac 484
                 ||||| ||||| ||||||||||||||||||||||| |||  ||||| | ||||||||||
Sbjct: 27981541 tggaagcaaaattccttgtaaccttgaagtttctgactgtctaacaagtcatgatggtac 27981600

                                                                            
Query: 485      aagtgcttcaagttctagtaatgaaaaggtcaaagttggacctgttgtttctattgcaaa 544
                |||||||||||||||||||||||||||| |||   ||||| ||||| |||||||||||||
Sbjct: 27981601 aagtgcttcaagttctagtaatgaaaagatcactattgga-ctgttatttctattgcaaa 27981659

                                                                            
Query: 545      atctgtgcaacaaatggggtctacgtaggttttttcatcgtcccaggcgcatttcaaatg 604
                | |||||||| || ||| |  | ||||||||| ||||||| ||||| || ||||||||||
Sbjct: 27981660 aactgtgcaagaattggaggttgcgtaggtttcttcatcggcccagacgtatttcaaatg 27981719

                                                 
Query: 605      gcacaacaccaatttttgttgatgattctggaa 637
                | || |||||| |||| | |||| |||||||||
Sbjct: 27981720 gtaccacaccagttttcgatgataattctggaa 27981752



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>emb|AJ439082.1|OSA439082 Oryza sativa partial mRNA for phosphatidylinositol-4-phosphate
           5-kinase (PIPK1 gene)
          Length = 2132

 Score =  498 bits (251), Expect = e-137
 Identities = 468/539 (86%), Gaps = 1/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 99  ggttcttggaggatgaacaaaaagcagggaatggggacaatggtttactcaaactctgac 158
           |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| |||
Sbjct: 1   ggttcttggaggatgaacaagaagcatggtatggggacaatggtttactctaactccgac 60

                                                                       
Query: 159 agttatgaaggtctgtggaacgagggtttgccggatggatatggtaaatatacatgggct 218
           | |||||||||| | ||||| || ||||| || |||| || ||||||||| |||||||||
Sbjct: 61  acttatgaaggtttctggaatgaaggtttacctgatgaatttggtaaatacacatgggct 120

                                                                       
Query: 219 gctggcaacatctacattggtagctggaagtcaggtagcatgaacggccgaggcgtaatg 278
           | ||||||| | |||||||| || ||||| ||||| |  ||||| ||| | || ||||||
Sbjct: 121 gatggcaacgtatacattggaagatggaaatcaggcaaaatgaatggcagcggggtaatg 180

                                                                       
Query: 279 cagtgggtaaatggtgatactcttgactgtaattggctcaatgggctggctcatggcaaa 338
           |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 cagtggataaatggtgatactcttgactgtaattggctcaatggcctggctcatggcaaa 240

                                                                       
Query: 339 ggttactgcaaatatgcgtcaggggcatgttacattggtacgtgggataggggagtcaag 398
           ||||||||||||||||| || ||||| || ||||||||||| |||||||| ||| | |||
Sbjct: 241 ggttactgcaaatatgcatctggggcttgctacattggtacatgggatagaggactaaag 300

                                                                       
Query: 399 gatggccatggcatattttatcaaccaggaagtaaaataccttgtaaccttgaagtttct 458
           ||||||||||| | |||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 301 gatggccatggtacattttatcaacctggaagcaaaattccttgtaaccttgaagtttct 360

                                                                       
Query: 459 gagtgtgcaacaaataatgatggtacaagtgcttcaagttctagtaatgaaaaggtcaaa 518
           || |||  ||||| | |||||||||||||||||||||||||||||||||||||| |||  
Sbjct: 361 gactgtctaacaagtcatgatggtacaagtgcttcaagttctagtaatgaaaagatcact 420

                                                                       
Query: 519 gttggacctgttgtttctattgcaaaatctgtgcaacaaatggggtctacgtaggttttt 578
            ||||| ||||| |||||||||||||| |||||||| || ||| |  | ||||||||| |
Sbjct: 421 attgga-ctgttatttctattgcaaaaactgtgcaagaattggaggttgcgtaggtttct 479

                                                                      
Query: 579 tcatcgtcccaggcgcatttcaaatggcacaacaccaatttttgttgatgattctggaa 637
           |||||| ||||| || ||||||||||| || |||||| |||| | |||| |||||||||
Sbjct: 480 tcatcggcccagacgtatttcaaatggtaccacaccagttttcgatgataattctggaa 538



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>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score =  359 bits (181), Expect = 7e-96
 Identities = 392/461 (85%), Gaps = 1/461 (0%)
 Strand = Plus / Plus

                                                                         
Query: 6     gtggccctcaggcgcatcctatgagggcgacttccgtggaggttt-atcgacggaacagg 64
             |||||| |||||||| || ||||| || ||  || |||||||||| || || ||||||||
Sbjct: 69544 gtggccttcaggcgcttcatatgatggagatctctgtggaggtttcattgatggaacagg 69603

                                                                         
Query: 65    cactttcaagggggtcgacggctcggtttacaaaggttcttggaggatgaacaaaaagca 124
             ||||||||| || || || || || ||||| |||||||||||||||||||||||||| ||
Sbjct: 69604 cactttcaaaggagttgatggatctgtttataaaggttcttggaggatgaacaaaaaaca 69663

                                                                         
Query: 125   gggaatggggacaatggtttactcaaactctgacagttatgaaggtctgtggaacgaggg 184
              |||||||| |||||||||||  | ||   ||| | ||| |||||| | |||||||||||
Sbjct: 69664 tggaatgggcacaatggtttatgccaatggtgatacttacgaaggtttatggaacgaggg 69723

                                                                         
Query: 185   tttgccggatggatatggtaaatatacatgggctgctggcaacatctacattggtagctg 244
              ||||| ||||||| ||||||||||||||||| || ||||||||||||||||||  | ||
Sbjct: 69724 cttgccagatggatttggtaaatatacatgggttgatggcaacatctacattggaggatg 69783

                                                                         
Query: 245   gaagtcaggtagcatgaacggccgaggcgtaatgcagtgggtaaatggtgatactcttga 304
             ||| || ||||  ||||| ||| |||| || ||||| |||  |||||| |||||||||||
Sbjct: 69784 gaaatctggtaaaatgaatggcagaggagtgatgcaatggacaaatggcgatactcttga 69843

                                                                         
Query: 305   ctgtaattggctcaatgggctggctcatggcaaaggttactgcaaatatgcgtcaggggc 364
             |||||||||||| ||||| ||||||||||| |||||||  || |||||||| ||||||||
Sbjct: 69844 ctgtaattggcttaatggactggctcatggaaaaggtttttgtaaatatgcatcaggggc 69903

                                                                         
Query: 365   atgttacattggtacgtgggataggggagtcaaggatggccatggcatattttatcaacc 424
             ||||||||||||||| ||||| || ||| ||||||| || |||||||| |||||||||||
Sbjct: 69904 atgttacattggtacatgggacagaggactcaaggacggacatggcatgttttatcaacc 69963

                                                      
Query: 425   aggaagtaaaataccttgtaaccttgaagtttctgagtgtg 465
             |||||||||||| ||||||||||||||||| || |||||||
Sbjct: 69964 aggaagtaaaatgccttgtaaccttgaagtgtccgagtgtg 70004



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 586   cccaggcgcatttcaaatggcacaacaccaatttttgttgatgattctggaaat 639
             ||||| || |||||||||||||| |||||| |||||| |||| |||||||||||
Sbjct: 70124 cccagacgtatttcaaatggcaccacaccagtttttgatgataattctggaaat 70177



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>dbj|AK065869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045E16, full
           insert sequence
          Length = 1978

 Score =  210 bits (106), Expect = 4e-51
 Identities = 209/242 (86%), Gaps = 1/242 (0%)
 Strand = Plus / Plus

                                                                       
Query: 396 aaggatggccatggcatattttatcaaccaggaagtaaaataccttgtaaccttgaagtt 455
           |||||||||||||| | |||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 7   aaggatggccatggtacattttatcaacctggaagcaaaattccttgtaaccttgaagtt 66

                                                                       
Query: 456 tctgagtgtgcaacaaataatgatggtacaagtgcttcaagttctagtaatgaaaaggtc 515
           ||||| |||  ||||| | |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 67  tctgactgtctaacaagtcatgatggtacaagtgcttcaagttctagtaatgaaaagatc 126

                                                                       
Query: 516 aaagttggacctgttgtttctattgcaaaatctgtgcaacaaatggggtctacgtaggtt 575
           |   ||||| ||||| |||||||||||||| |||||||| || ||| |  | ||||||||
Sbjct: 127 actattgga-ctgttatttctattgcaaaaactgtgcaagaattggaggttgcgtaggtt 185

                                                                       
Query: 576 ttttcatcgtcccaggcgcatttcaaatggcacaacaccaatttttgttgatgattctgg 635
           | ||||||| ||||| || ||||||||||| || |||||| |||| | |||| |||||||
Sbjct: 186 tcttcatcggcccagacgtatttcaaatggtaccacaccagttttcgatgataattctgg 245

             
Query: 636 aa 637
           ||
Sbjct: 246 aa 247



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>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018
          Length = 340000

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 509   aaaggtcaaagttggacctgttg 531
             |||||||||||||||||||||||
Sbjct: 86248 aaaggtcaaagttggacctgttg 86226



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>gb|AC106806.2| Homo sapiens chromosome 5 clone RP11-510I6, complete sequence
          Length = 162485

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 239   tagctggaagtcaggtagcatga 261
             |||||||||||||||||||||||
Sbjct: 40018 tagctggaagtcaggtagcatga 40040



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>gb|AC034219.5| Homo sapiens chromosome 5 clone CTD-2028K10, complete sequence
          Length = 120324

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 239   tagctggaagtcaggtagcatga 261
             |||||||||||||||||||||||
Sbjct: 37749 tagctggaagtcaggtagcatga 37727



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>dbj|BS000043.1| Pan troglodytes chromosome 22 clone:RP43-169N06, map 22, complete
             sequences
          Length = 189421

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 509   aaaggtcaaagttggacctgttg 531
             |||||||||||||||||||||||
Sbjct: 93958 aaaggtcaaagttggacctgttg 93936



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>emb|AL109763.2|HSP10238 Homo sapiens chromosome 21 sequence from PAC RPCI-1 238P10 map 21q21
             region D21S189-LA297, complete sequence
          Length = 131414

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 509   aaaggtcaaagttggacctgttg 531
             |||||||||||||||||||||||
Sbjct: 14647 aaaggtcaaagttggacctgttg 14625



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>gb|AC018814.6| Homo sapiens chromosome 3 clone RP11-204C23 map 3p, complete sequence
          Length = 166162

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 239   tagctggaagtcaggtagcatga 261
             |||||||||||||||||||||||
Sbjct: 71700 tagctggaagtcaggtagcatga 71722



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>gb|AC115789.9| Mus musculus chromosome 18, clone RP23-398N2, complete sequence
          Length = 206108

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 89    ggtttacaaaggttcttggagg 110
             ||||||||||||||||||||||
Sbjct: 76126 ggtttacaaaggttcttggagg 76147



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>gb|AC103710.2| Homo sapiens chromosome 11, clone CTD-2379P15, complete sequence
          Length = 151970

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 618   ttttgttgatgattctggaaat 639
             ||||||||||||||||||||||
Sbjct: 29095 ttttgttgatgattctggaaat 29116



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>gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, complete sequence
          Length = 207040

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 239   tagctggaagtcaggtagcatg 260
             ||||||||||||||||||||||
Sbjct: 36598 tagctggaagtcaggtagcatg 36619



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>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence
          Length = 149542

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 618   ttttgttgatgattctggaaat 639
             ||||||||||||||||||||||
Sbjct: 98352 ttttgttgatgattctggaaat 98373



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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     tgagggcgacttccgtggag 46
              ||||||||||||||||||||
Sbjct: 365506 tgagggcgacttccgtggag 365487



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>gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8, complete sequence
          Length = 140539

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tgagggcgacttccgtggag 46
             ||||||||||||||||||||
Sbjct: 28020 tgagggcgacttccgtggag 28039



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>ref|XM_819274.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 hypothetical protein
          (Tb927.5.1120) partial mRNA
          Length = 18189

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 27 tgagggcgacttccgtggag 46
          ||||||||||||||||||||
Sbjct: 93 tgagggcgacttccgtggag 74



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>ref|XM_803335.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509459.50) partial mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  ccggatggatatggtaaata 208
            ||||||||||||||||||||
Sbjct: 1833 ccggatggatatggtaaata 1852



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>ref|XM_814173.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506357.80) partial mRNA
          Length = 4668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 597  ttcaaatggcacaacaccaatttt 620
            ||||||| ||||||||||||||||
Sbjct: 2982 ttcaaatagcacaacaccaatttt 3005



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>gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome 18, complete sequence
          Length = 194291

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    tgaaaaggtcaaagttggac 525
              ||||||||||||||||||||
Sbjct: 155783 tgaaaaggtcaaagttggac 155802



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>ref|XM_947888.1| Theileria annulata strain Ankara hypothetical protein (TA07775)
           partial mRNA
          Length = 453

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 527 tgttgtttctattgcaaaatctgt 550
           ||||||||||||||| ||||||||
Sbjct: 97  tgttgtttctattgcgaaatctgt 74



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>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence
          Length = 126541

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   ttcaagttctagtaatgaaa 510
             ||||||||||||||||||||
Sbjct: 91305 ttcaagttctagtaatgaaa 91286



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>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence
          Length = 121884

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 491    ttcaagttctagtaatgaaa 510
              ||||||||||||||||||||
Sbjct: 107440 ttcaagttctagtaatgaaa 107459



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>gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, complete sequence
          Length = 151031

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 239   tagctggaagtcaggtagcatgaa 262
             ||||| ||||||||||||||||||
Sbjct: 60286 tagcttgaagtcaggtagcatgaa 60309



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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     ccatggcatattttatcaac 423
               ||||||||||||||||||||
Sbjct: 2039682 ccatggcatattttatcaac 2039663



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>gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, complete sequence
          Length = 200418

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    gcatattttatcaaccagga 428
              ||||||||||||||||||||
Sbjct: 163257 gcatattttatcaaccagga 163276



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>gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, complete sequence
          Length = 181226

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 238    gtagctggaagtcaggtagcatga 261
              |||||| |||||||||||||||||
Sbjct: 148186 gtagcttgaagtcaggtagcatga 148163



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 209      tacatgggctgctggcaaca 228
                ||||||||||||||||||||
Sbjct: 24731224 tacatgggctgctggcaaca 24731205



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>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence
          Length = 162694

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 331   atggcaaaggttactgcaaatatg 354
             |||||||| |||||||||||||||
Sbjct: 60526 atggcaaatgttactgcaaatatg 60549



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>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ggatatggtaaatatacatg 214
            ||||||||||||||||||||
Sbjct: 8181 ggatatggtaaatatacatg 8162



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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0040H10
          Length = 132919

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   tacatgggctgctggcaaca 228
             ||||||||||||||||||||
Sbjct: 87161 tacatgggctgctggcaaca 87142



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>gb|AC171733.1| Lycopersicon esculentum chromosome 11 clone C11HBa0034I10, complete
             sequence
          Length = 95704

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   tgcaaaatctgtgcaacaaa 558
             ||||||||||||||||||||
Sbjct: 43562 tgcaaaatctgtgcaacaaa 43543


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,016,634
Number of Sequences: 3902068
Number of extensions: 6016634
Number of successful extensions: 106743
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106546
Number of HSP's gapped (non-prelim): 187
length of query: 648
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 625
effective length of database: 17,143,297,704
effective search space: 10714561065000
effective search space used: 10714561065000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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