ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags32o23 |
|---|---|
| Clone Library Name | barley_pub |
>PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein| p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 Score = 134 bits (336), Expect(2) = 2e-32 Identities = 77/159 (48%), Positives = 97/159 (61%), Gaps = 2/159 (1%) Frame = +2 Query: 56 STGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE-EKRA 232 S+GEGK K ++ TTIYKR K Y LKMK SR FSE+ ++F MPFT RA E EK+A Sbjct: 230 SSGEGKAKDAGQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKA 288 Query: 233 RLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKITSHPLQ-QLEPSKSIE 409 R+G+VEC HELLQP+ VL+EK+G+ VA KFTVLLMPNG +ITS P + L S+ Sbjct: 289 RMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEV 348 Query: 410 DDAEIKAWLALGTKSXXXXXXXXXXXXXXDAAEAAEPME 526 DAE+KA L + A + E +E Sbjct: 349 QDAELKALLQSSASRKTQKKKKKKASKTAENATSGETLE 387 Score = 25.0 bits (53), Expect(2) = 2e-32 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = +3 Query: 6 DDAEFEENEVYAIDIV 53 + AEFE +EVYA+D++ Sbjct: 213 EKAEFEVHEVYAVDVL 228
>PA2G4_MOUSE (P50580) Proliferation-associated protein 2G4| (Proliferation-associated protein 1) (Protein p38-2G4) (Mpp1) (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) Length = 393 Score = 133 bits (335), Expect(2) = 3e-32 Identities = 77/159 (48%), Positives = 97/159 (61%), Gaps = 2/159 (1%) Frame = +2 Query: 56 STGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE-EKRA 232 S+GEGK K ++ TTIYKR K Y LKMK SR FSE+ ++F MPFT RA E EK+A Sbjct: 230 SSGEGKAKDAGQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKA 288 Query: 233 RLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKITSHPLQ-QLEPSKSIE 409 R+G+VEC HELLQP+ VL+EK+G+ VA KFTVLLMPNG +ITS P + L S+ Sbjct: 289 RMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEV 348 Query: 410 DDAEIKAWLALGTKSXXXXXXXXXXXXXXDAAEAAEPME 526 DAE+KA L + A + E +E Sbjct: 349 QDAELKALLQSSASRKTQKKKKKKASKTVENATSGETLE 387 Score = 25.0 bits (53), Expect(2) = 3e-32 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = +3 Query: 6 DDAEFEENEVYAIDIV 53 + AEFE +EVYA+D++ Sbjct: 213 EKAEFEVHEVYAVDVL 228
>CDB4_SCHPO (Q09184) Curved DNA-binding protein (42 kDa protein)| Length = 381 Score = 73.9 bits (180), Expect(2) = 4e-14 Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Frame = +2 Query: 53 TSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE-EKR 229 +++ GK K D T IYK+ D Y LK++ASR ++SEI KF PF+ R + + R Sbjct: 233 STSPSGKVKRSDIA-TRIYKKT-DTTYMLKLQASRKVYSEIQTKFGPFPFSTRNISFDSR 290 Query: 230 ARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT-SHPLQQLEPSKSI 406 +GL EC +H+LL PY VL +K G +VA T+ L G+ ++ S P + S Sbjct: 291 TNMGLNECTSHKLLFPYEVLLDKDGGIVAEFYSTIALTKKGTIILSDSEPKEDFIKSDKK 350 Query: 407 EDDAEIKAWL 436 +D EI A L Sbjct: 351 VEDPEIVALL 360 Score = 23.5 bits (49), Expect(2) = 4e-14 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +3 Query: 3 VDDAEFEENEVYAIDIV 53 +D FEE EVY +DI+ Sbjct: 215 MDTFTFEEGEVYGVDIL 231
>ARX1_SCHPO (O60180) Probable metalloprotease arx1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 417 Score = 60.5 bits (145), Expect = 4e-09 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 4/111 (3%) Frame = +2 Query: 101 TIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPY 280 T+Y V+ +Y LK+KASR + SEI ++ + PF +L +R LGL E + +L P Sbjct: 288 TLYIHDVNVSYMLKLKASRSLLSEIKKEKSVFPFHFGSLSSERNLLGLRELTDRHILVPM 347 Query: 281 PVLHEKQGDLVAHIKFTVLLMPNGSDKI----TSHPLQQLEPSKSIEDDAE 421 PVL +++A + TV+ PN S + P ++ S+ED + Sbjct: 348 PVLISSPSNVIAREELTVITQPNPSSDLLCLTVPTPPSYVKSDFSLEDGTD 398
>ARX1_YARLI (Q6CCY2) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 484 Score = 45.1 bits (105), Expect = 2e-04 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Frame = +2 Query: 86 DEKQTTI--YKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALEEK--RARLGLVEC 253 DE T I Y R Y LK++ASR + S++ + PF +E +ARLGL E Sbjct: 309 DESGTVINQYGRDFSVTYGLKIQASRKLLSQLEATTSVYPFKLSHVESNVAKARLGLGEI 368 Query: 254 MNHELLQPYPVLHEKQGDLVAHIKFT 331 + H++L P PV K L A +F+ Sbjct: 369 LAHQILVPIPVKVAKFVPLAALYEFS 394
>AMPM_METTH (O27355) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 299 Score = 43.9 bits (102), Expect = 4e-04 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 4/105 (3%) Frame = +2 Query: 65 EGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALEE----KRA 232 +G + D QT I++ ++ L++ +R + +I +++ +PF R LEE KR Sbjct: 196 DGVGLVTDMPQTYIFRFLRERP--LRLVHARRVLGKIREEYHALPFAQRWLEEYFDAKRL 253 Query: 233 RLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 367 + + + PY VL EK G +VA + TV++ +G IT Sbjct: 254 NASMRMLIQSRAIYPYHVLREKSGAMVAQWEHTVIVEEDGCTVIT 298
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 43.1 bits (100), Expect = 7e-04 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +2 Query: 137 LKMKASRFIFSEISQKFPIMPFTAR-ALEEKRARLGLVECMNHELLQPYPVLHEKQGDLV 313 +++ +R + IS+ +P +PF R L+ + RL L + + YP+L E++ +V Sbjct: 216 IRLPQARKLLDVISKNYPYLPFAERWVLKNESERLALNSLIRASCIYGYPILKERENGIV 275 Query: 314 AHIKFTVLLMPNGSDKIT 367 + T+L+ NG + T Sbjct: 276 GQAEHTILITENGVEITT 293
>AMPM_PYRHO (O58362) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 39.7 bits (91), Expect = 0.008 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%) Frame = +2 Query: 56 STGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE----E 223 +TG G+ +++ T IY D ++M +RF+ ++I +++ +PF R L+ E Sbjct: 191 TTGAGQ--VIEVPPTLIYMYVRDAP--VRMAQARFLLAKIKREYKTLPFAYRWLQGEMPE 246 Query: 224 KRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLL 340 + +L L L YPVL E +G +V + T+++ Sbjct: 247 GQLKLALRSLERSGALYGYPVLREIRGGMVTQFEHTIIV 285
>AMPM_ARCFU (O28438) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 291 Score = 38.1 bits (87), Expect = 0.023 Identities = 21/73 (28%), Positives = 40/73 (54%) Frame = +2 Query: 137 LKMKASRFIFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPYPVLHEKQGDLVA 316 ++MK +R I E+ + + +PF R L +K + + + +L+ YPVL E G LV+ Sbjct: 215 VRMKMAREILKEVEENYKTLPFAKRWL-KKAPDIIISKLAREGVLRAYPVLTEVSGGLVS 273 Query: 317 HIKFTVLLMPNGS 355 + T+++ G+ Sbjct: 274 QWEHTLIVEDGGA 286
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 38.1 bits (87), Expect = 0.023 Identities = 25/101 (24%), Positives = 53/101 (52%), Gaps = 4/101 (3%) Frame = +2 Query: 56 STGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIMPFTARALE---E 223 STG+G + ++ + + Y + D + L++ ++ + + I++ F + F R L+ E Sbjct: 329 STGKGYVR--EDLECSHYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGE 386 Query: 224 KRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMP 346 + + L + ++QPYP L + +G V+ + T+LL P Sbjct: 387 TKYLMALKNLCDSGIVQPYPPLCDVKGSYVSQFEHTILLRP 427
>AMPM_PYRAB (Q9UYT4) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +2 Query: 56 STGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE----E 223 +TG G+ +++ T IY D ++M +RF+ ++I +++ +PF R L+ E Sbjct: 191 TTGAGQ--VIEVPPTLIYMYVRDAP--VRMVQARFLLAKIKREYKTLPFAYRWLQGEMPE 246 Query: 224 KRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLL 340 + +L L L YPVL E + LV + T+++ Sbjct: 247 GQLKLALRTLEKSGALYGYPVLREIRNGLVTQFEHTIIV 285
>AMPM2_RAT (P38062) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 35.4 bits (80), Expect = 0.15 Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Frame = +2 Query: 68 GKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIMPFTARALE---EKRAR 235 GK + D+ + + Y + D + +++ ++ + + I++ F + F R L+ E + Sbjct: 370 GKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYL 429 Query: 236 LGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 367 + L + ++ PYP L + +G A + T+LL P + ++ Sbjct: 430 MALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVS 473
>AMPM2_MOUSE (O08663) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 35.4 bits (80), Expect = 0.15 Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Frame = +2 Query: 68 GKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIMPFTARALE---EKRAR 235 GK + D+ + + Y + D + +++ ++ + + I++ F + F R L+ E + Sbjct: 370 GKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYL 429 Query: 236 LGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 367 + L + ++ PYP L + +G A + T+LL P + ++ Sbjct: 430 MALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVS 473
>AMPM2_HUMAN (P50579) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 35.4 bits (80), Expect = 0.15 Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Frame = +2 Query: 68 GKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIMPFTARALE---EKRAR 235 GK + D+ + + Y + D + +++ ++ + + I++ F + F R L+ E + Sbjct: 370 GKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYL 429 Query: 236 LGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 367 + L + ++ PYP L + +G A + T+LL P + ++ Sbjct: 430 MALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVS 473
>AMPM_PYRFU (P56218) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 35.0 bits (79), Expect = 0.20 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Frame = +2 Query: 68 GKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE----EKRAR 235 G ++++ T IY D +++ +RF+ ++I +++ +PF R L+ E + + Sbjct: 193 GAGQVIEVPPTLIYMYVRD--VPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLK 250 Query: 236 LGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLL 340 L L + YPVL E + +VA + T+++ Sbjct: 251 LALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIV 285
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 35.0 bits (79), Expect = 0.20 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 5/105 (4%) Frame = +2 Query: 68 GKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALEEKR-ARLGL 244 GK + D + + V K+ L K ++ + F +PF+ R L+ G Sbjct: 249 GKGFINDRSPCSHFMLNVHKSRKLFNKDLIKVYEFVKSSFGTLPFSPRHLDHYNLVEGGS 308 Query: 245 VECMN----HELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 367 ++ +N L PYP L++ G VA + TV L NG + +T Sbjct: 309 LKSVNLLTMMGLFTPYPPLNDIDGSKVAQFEHTVYLSENGKEILT 353
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 34.3 bits (77), Expect = 0.34 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Frame = +2 Query: 110 KRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALE---EKRARLGLVECMNHELLQPY 280 + A D + +++ + I + F +PF R L+ +++ L + H L+Q Y Sbjct: 328 RSAEDHQVMPTLDSAKNLLKTIDRNFGTLPFCRRYLDRLGQEKYLFALNNLVRHGLVQDY 387 Query: 281 PVLHEKQGDLVAHIKFTVLL 340 P L++ G A + T+LL Sbjct: 388 PPLNDIPGSYTAQFEHTILL 407
>ARX1_DEBHA (Q6BI90) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 564 Score = 33.5 bits (75), Expect = 0.58 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 17/81 (20%) Frame = +2 Query: 95 QTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPF----------------TARALEEK 226 ++TIY R NY L++K SR + +I ++F + PF A +E Sbjct: 344 KSTIYIRDYAVNYQLRLKNSRSLLGKIDKEFTVFPFKLSHTSPSFPATNSQDLATLKKEL 403 Query: 227 RA-RLGLVECMNHELLQPYPV 286 A +LGL E N L+ P+ Sbjct: 404 IANKLGLSELANRHLINAKPI 424
>ARX1_CANAL (Q5AI37) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated| with ribosomal export complex protein 1) Length = 564 Score = 33.1 bits (74), Expect = 0.76 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 24/88 (27%) Frame = +2 Query: 95 QTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPF------------------------ 202 +++I+ R + LK+K S+ + EI ++F + PF Sbjct: 336 KSSIFIRDFAVTHQLKLKTSKKLLGEIDRQFSVYPFKLDYASKNFPINTESSEDEIKQQI 395 Query: 203 TARALEEKRARLGLVECMNHELLQPYPV 286 A + K RLG E N L+QP P+ Sbjct: 396 AAIGQDMKSNRLGAAELSNRHLIQPKPI 423
>AMP2A_ARATH (Q9FV49) Methionine aminopeptidase 2A (EC 3.4.11.18) (MetAP 2A)| (MAP 2A) (Peptidase M 2A) Length = 441 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/108 (20%), Positives = 55/108 (50%), Gaps = 4/108 (3%) Frame = +2 Query: 56 STGEGKPKLLDEKQTTIYKRAVDKNY-HLKMKASRFIFSEISQKFPIMPFTARALE---E 223 STG+G + ++ + + Y + D + L++ ++ + + I++ F + F R L+ E Sbjct: 331 STGKGYVR--EDLECSHYMKNYDVGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGE 388 Query: 224 KRARLGLVECMNHELLQPYPVLHEKQGDLVAHIKFTVLLMPNGSDKIT 367 + + L + +++P P + + +G ++ + T+LL P + I+ Sbjct: 389 TKYLMALKNLCDSGIIEPCPPVCDVKGSYISQFEHTILLRPTCKEIIS 436
>MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility protein 1| homolog precursor (Very large G-protein coupled receptor 1) Length = 6199 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +2 Query: 161 IFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPYPVL 289 IF+++S KF +P TAR E+ R V + E +P P+L Sbjct: 2131 IFADVSVKFRAVPLTARVGEDYRVASSDVVLLEGESSKPVPIL 2173
>GUNB_NEOPA (Q12647) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 473 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 8/49 (16%) Frame = -2 Query: 393 GSNCCSGCDVILSDPFGINNTVNLMWA--------TRSPCFSWRTGYGC 271 G +CC+GC+V +D G N W T C+S + GY C Sbjct: 398 GYSCCNGCEVEYTDSDGEWGVENGNWCGIKSSCSNTSRICWSEKLGYPC 446 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,000,014 Number of Sequences: 219361 Number of extensions: 1563594 Number of successful extensions: 3865 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3860 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
